Phase III
Yazid Hoblos
2022-11-26
knitr :: opts_chunk$set(warning=FALSE)
knitr :: opts_chunk$set(error=TRUE)library(dplyr)##
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library(cli)
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## alphalibrary(factoextra)## Welcome! Want to learn more? See two factoextra-related books at https://goo.gl/ve3WBadf = read.csv("Liver Cancer.csv")df_S = df
df_S[3:ncol(df_S)] <- scale(df_S[3:ncol(df_S)],center = TRUE, scale = TRUE)df_M = df[1:2]
normalize <- function(x, na.rm = TRUE) {
return((x- min(x)) /(max(x)-min(x)))
}
df_M [3:ncol(df)] = lapply(df[3:ncol(df)], normalize)df_R = df[1:2]
robust_scalar<- function(x){(x- median(x)) /(quantile(x,probs = .75)-quantile(x,probs = .25))}
df_R[3:ncol(df)] = lapply(df[3:ncol(df)], robust_scalar)df_s, df_M, and df_R are the normalized versions of df using standardization, min-max, and robust scalar respectively.
I. Genes selection (Random forest based approach)
(1.1) Introducing Boruta
A random-forest based approach for gene selection will be considered here. This will be done through the package Boruta, providing the function Boruta, which computes the importance of each feature in the given data frame. It does so by shuffling the values to remove their correlations with the target variable, thus creating a set of shadow features. A random forest will be next built and the importance of each feature will be computed using the Mean Decrease Accuracy approach, which expresses how much accuracy the model loses by excluding each feature.
The Z score for each shadow feature will be computed, where the Z score is the mean of accuracy loss divided by standard deviation of accuracy loss, and features will be classified as unimportant, important or tentative based on where the importance value falls with respect to the max z-value (shadow max). The logic behind this is that a feature is useful only if it’s capable of doing better than the best randomized (shadow) feature, i.e its importance value is higher than shadow max.
Tentative features have an importance value that is so close to shadow max that Boruta is not able to make a decision about them.
First Boruta will be run on the original dataset.
df$type=as.factor(df$type)
boruta <- Boruta(y=df[,2], x =df[,3:ncol(df)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## 16. run of importance source...## 17. run of importance source...## 18. run of importance source...## 19. run of importance source...## 20. run of importance source...## 21. run of importance source...## 22. run of importance source...## After 22 iterations, +5 mins:## confirmed 2 attributes: X209365_s_at, X210481_s_at;## rejected 21514 attributes: AFFX.BioB.3_at, AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and 21509 more;## still have 761 attributes left.## 23. run of importance source...## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## After 26 iterations, +5 mins:## confirmed 5 attributes: X200910_at, X207804_s_at, X207995_s_at, X218002_s_at, X220114_s_at;## rejected 249 attributes: X200003_s_at, X200068_s_at, X200093_s_at, X200627_at, X200648_s_at and 244 more;## still have 507 attributes left.## 27. run of importance source...## 28. run of importance source...## 29. run of importance source...## 30. run of importance source...## After 30 iterations, +5.1 mins:## confirmed 3 attributes: X205866_at, X218061_at, X220496_at;## rejected 100 attributes: X1494_f_at, X200027_at, X200057_s_at, X200872_at, X201090_x_at and 95 more;## still have 404 attributes left.## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## 34. run of importance source...## After 34 iterations, +5.1 mins:## confirmed 3 attributes: X203554_x_at, X212554_at, X217165_x_at;## rejected 31 attributes: X200661_at, X202025_x_at, X202983_at, X203120_at, X203638_s_at and 26 more;## still have 370 attributes left.## 35. run of importance source...## 36. run of importance source...## 37. run of importance source...## 38. run of importance source...## After 38 iterations, +5.2 mins:## confirmed 4 attributes: X205019_s_at, X207609_s_at, X219787_s_at, X220148_at;## rejected 45 attributes: X200014_s_at, X200064_at, X200652_at, X200765_x_at, X200877_at and 40 more;## still have 321 attributes left.## 39. run of importance source...## 40. run of importance source...## 41. run of importance source...## After 41 iterations, +5.2 mins:## confirmed 5 attributes: X203316_s_at, X204428_s_at, X204641_at, X206380_s_at, X206680_at;## rejected 18 attributes: X202095_s_at, X203258_at, X205364_at, X206610_s_at, X206754_s_at and 13 more;## still have 298 attributes left.## 42. run of importance source...## 43. run of importance source...## 44. run of importance source...## 45. run of importance source...## After 45 iterations, +5.2 mins:## confirmed 4 attributes: X200882_s_at, X201293_x_at, X206453_s_at, X217319_x_at;## rejected 19 attributes: X200788_s_at, X200792_at, X201555_at, X202824_s_at, X202961_s_at and 14 more;## still have 275 attributes left.## 46. run of importance source...## 47. run of importance source...## 48. run of importance source...## After 48 iterations, +5.2 mins:## confirmed 2 attributes: X201453_x_at, X214710_s_at;## rejected 20 attributes: X200052_s_at, X201771_at, X201890_at, X201926_s_at, X201956_s_at and 15 more;## still have 253 attributes left.## 49. run of importance source...## 50. run of importance source...## 51. run of importance source...## After 51 iterations, +5.3 mins:## rejected 10 attributes: X202868_s_at, X203270_at, X203454_s_at, X206210_s_at, X209044_x_at and 5 more;## still have 243 attributes left.## 52. run of importance source...## 53. run of importance source...## 54. run of importance source...## After 54 iterations, +5.3 mins:## confirmed 2 attributes: X201656_at, X205911_at;## rejected 9 attributes: X201893_x_at, X203666_at, X204745_x_at, X206102_at, X209309_at and 4 more;## still have 232 attributes left.## 55. run of importance source...## 56. run of importance source...## 57. run of importance source...## After 57 iterations, +5.3 mins:## confirmed 2 attributes: X212551_at, X212661_x_at;## rejected 8 attributes: X201291_s_at, X202503_s_at, X202892_at, X203986_at, X204822_at and 3 more;## still have 222 attributes left.## 58. run of importance source...## 59. run of importance source...## 60. run of importance source...## After 60 iterations, +5.3 mins:## confirmed 1 attribute: X201128_s_at;## rejected 3 attributes: X200783_s_at, X207165_at, X213661_at;## still have 218 attributes left.## 61. run of importance source...## 62. run of importance source...## 63. run of importance source...## After 63 iterations, +5.3 mins:## rejected 3 attributes: X203358_s_at, X213399_x_at, X216336_x_at;## still have 215 attributes left.## 64. run of importance source...## 65. run of importance source...## 66. run of importance source...## After 66 iterations, +5.4 mins:## confirmed 2 attributes: X207828_s_at, X209219_at;## rejected 4 attributes: X208937_s_at, X212185_x_at, X215014_at, X218768_at;## still have 209 attributes left.## 67. run of importance source...## 68. run of importance source...## 69. run of importance source...## After 69 iterations, +5.4 mins:## confirmed 1 attribute: X208079_s_at;## rejected 1 attribute: X39763_at;## still have 207 attributes left.## 70. run of importance source...## 71. run of importance source...## 72. run of importance source...## After 72 iterations, +5.4 mins:## confirmed 4 attributes: X202861_at, X211745_x_at, X220017_x_at, X36829_at;## rejected 2 attributes: X209160_at, X209687_at;## still have 201 attributes left.## 73. run of importance source...## 74. run of importance source...## 75. run of importance source...## After 75 iterations, +5.4 mins:## confirmed 2 attributes: X206643_at, X213629_x_at;## still have 199 attributes left.## 76. run of importance source...## 77. run of importance source...## After 77 iterations, +5.4 mins:## confirmed 1 attribute: X220491_at;## rejected 1 attribute: X210460_s_at;## still have 197 attributes left.## 78. run of importance source...## 79. run of importance source...## 80. run of importance source...## After 80 iterations, +5.4 mins:## confirmed 3 attributes: X200734_s_at, X205890_s_at, X216661_x_at;## still have 194 attributes left.## 81. run of importance source...## 82. run of importance source...## 83. run of importance source...## After 83 iterations, +5.5 mins:## confirmed 2 attributes: X209458_x_at, X216025_x_at;## still have 192 attributes left.## 84. run of importance source...## 85. run of importance source...## 86. run of importance source...## After 86 iterations, +5.5 mins:## confirmed 3 attributes: X205440_s_at, X205554_s_at, X214421_x_at;## still have 189 attributes left.## 87. run of importance source...## 88. run of importance source...## 89. run of importance source...## After 89 iterations, +5.5 mins:## rejected 1 attribute: X204023_at;## still have 188 attributes left.## 90. run of importance source...## 91. run of importance source...## After 91 iterations, +5.5 mins:## confirmed 2 attributes: X212149_at, X215768_at;## still have 186 attributes left.## 92. run of importance source...## 93. run of importance source...## 94. run of importance source...## After 94 iterations, +5.5 mins:## confirmed 5 attributes: X202541_at, X202963_at, X204301_at, X209447_at, X211978_x_at;## still have 181 attributes left.## 95. run of importance source...## 96. run of importance source...## 97. run of importance source...## After 97 iterations, +5.6 mins:## confirmed 1 attribute: X202737_s_at;## rejected 1 attribute: X206305_s_at;## still have 179 attributes left.## 98. run of importance source...## 99. run of importance source...## After 99 iterations, +5.6 mins:## confirmed 1 attribute: X205858_at;## still have 178 attributes left.## 100. run of importance source...## 101. run of importance source...## 102. run of importance source...## After 102 iterations, +5.6 mins:## confirmed 4 attributes: X200954_at, X209189_at, X217521_at, X220116_at;## still have 174 attributes left.## 103. run of importance source...## 104. run of importance source...## 105. run of importance source...## After 105 iterations, +5.6 mins:## rejected 1 attribute: X213832_at;## still have 173 attributes left.## 106. run of importance source...## 107. run of importance source...## After 107 iterations, +5.6 mins:## confirmed 1 attribute: X205392_s_at;## still have 172 attributes left.## 108. run of importance source...## 109. run of importance source...## 110. run of importance source...## After 110 iterations, +5.7 mins:## confirmed 4 attributes: X201584_s_at, X211699_x_at, X213068_at, X217414_x_at;## rejected 1 attribute: X219543_at;## still have 167 attributes left.## 111. run of importance source...## 112. run of importance source...## 113. run of importance source...## After 113 iterations, +5.7 mins:## confirmed 1 attribute: X201577_at;## still have 166 attributes left.## 114. run of importance source...## 115. run of importance source...## After 115 iterations, +5.7 mins:## confirmed 1 attribute: X201531_at;## rejected 2 attributes: X206461_x_at, X209613_s_at;## still have 163 attributes left.## 116. run of importance source...## 117. run of importance source...## 118. run of importance source...## After 118 iterations, +5.7 mins:## confirmed 7 attributes: X201398_s_at, X201527_at, X204977_at, X207218_at, X209821_at and 2 more;## rejected 1 attribute: X201252_at;## still have 155 attributes left.## 119. run of importance source...## 120. run of importance source...## After 120 iterations, +5.7 mins:## confirmed 1 attribute: X215138_s_at;## still have 154 attributes left.## 121. run of importance source...## 122. run of importance source...## 123. run of importance source...## After 123 iterations, +5.7 mins:## confirmed 2 attributes: X207076_s_at, X215330_at;## rejected 1 attribute: X200826_at;## still have 151 attributes left.## 124. run of importance source...## 125. run of importance source...## 126. run of importance source...## 127. run of importance source...## 128. run of importance source...## After 128 iterations, +5.8 mins:## rejected 1 attribute: X212832_s_at;## still have 150 attributes left.## 129. run of importance source...## 130. run of importance source...## 131. run of importance source...## After 131 iterations, +5.8 mins:## confirmed 1 attribute: X205531_s_at;## still have 149 attributes left.## 132. run of importance source...## 133. run of importance source...## After 133 iterations, +5.8 mins:## rejected 1 attribute: X221923_s_at;## still have 148 attributes left.## 134. run of importance source...## 135. run of importance source...## 136. run of importance source...## 137. run of importance source...## 138. run of importance source...## After 138 iterations, +5.8 mins:## confirmed 1 attribute: X200606_at;## rejected 1 attribute: X207584_at;## still have 146 attributes left.## 139. run of importance source...## 140. run of importance source...## 141. run of importance source...## After 141 iterations, +5.8 mins:## confirmed 1 attribute: X208147_s_at;## rejected 1 attribute: X214180_at;## still have 144 attributes left.## 142. run of importance source...## 143. run of importance source...## 144. run of importance source...## 145. run of importance source...## 146. run of importance source...## After 146 iterations, +5.9 mins:## rejected 3 attributes: X202580_x_at, X211456_x_at, X222077_s_at;## still have 141 attributes left.## 147. run of importance source...## 148. run of importance source...## After 148 iterations, +5.9 mins:## rejected 1 attribute: X210105_s_at;## still have 140 attributes left.## 149. run of importance source...## 150. run of importance source...## 151. run of importance source...## 152. run of importance source...## 153. run of importance source...## After 153 iterations, +5.9 mins:## confirmed 3 attributes: X201184_s_at, X205819_at, X219485_s_at;## still have 137 attributes left.## 154. run of importance source...## 155. run of importance source...## 156. run of importance source...## After 156 iterations, +6 mins:## confirmed 1 attribute: X207262_at;## still have 136 attributes left.## 157. run of importance source...## 158. run of importance source...## After 158 iterations, +6 mins:## confirmed 1 attribute: X205298_s_at;## still have 135 attributes left.## 159. run of importance source...## 160. run of importance source...## 161. run of importance source...## After 161 iterations, +6 mins:## confirmed 4 attributes: X205740_s_at, X209825_s_at, X211023_at, X211765_x_at;## still have 131 attributes left.## 162. run of importance source...## 163. run of importance source...## 164. run of importance source...## 165. run of importance source...## 166. run of importance source...## After 166 iterations, +6.1 mins:## confirmed 3 attributes: X205086_s_at, X205306_x_at, X216782_at;## still have 128 attributes left.## 167. run of importance source...## 168. run of importance source...## After 168 iterations, +6.1 mins:## confirmed 2 attributes: X204018_x_at, X209335_at;## still have 126 attributes left.## 169. run of importance source...## 170. run of importance source...## 171. run of importance source...## After 171 iterations, +6.2 mins:## confirmed 1 attribute: X207330_at;## still have 125 attributes left.## 172. run of importance source...## 173. run of importance source...## After 173 iterations, +6.2 mins:## confirmed 1 attribute: X201516_at;## still have 124 attributes left.## 174. run of importance source...## 175. run of importance source...## 176. run of importance source...## After 176 iterations, +6.3 mins:## confirmed 1 attribute: X202940_at;## still have 123 attributes left.## 177. run of importance source...## 178. run of importance source...## After 178 iterations, +6.3 mins:## confirmed 2 attributes: X203755_at, X211378_x_at;## still have 121 attributes left.## 179. run of importance source...## 180. run of importance source...## 181. run of importance source...## 182. run of importance source...## 183. run of importance source...## After 183 iterations, +6.3 mins:## rejected 1 attribute: X209711_at;## still have 120 attributes left.## 184. run of importance source...## 185. run of importance source...## 186. run of importance source...## 187. run of importance source...## 188. run of importance source...## After 188 iterations, +6.4 mins:## confirmed 1 attribute: X208816_x_at;## rejected 1 attribute: X201714_at;## still have 118 attributes left.## 189. run of importance source...## 190. run of importance source...## 191. run of importance source...## After 191 iterations, +6.4 mins:## confirmed 1 attribute: X210095_s_at;## still have 117 attributes left.## 192. run of importance source...## 193. run of importance source...## 194. run of importance source...## 195. run of importance source...## After 195 iterations, +6.4 mins:## confirmed 1 attribute: X201441_at;## rejected 1 attribute: X201587_s_at;## still have 115 attributes left.## 196. run of importance source...## 197. run of importance source...## 198. run of importance source...## After 198 iterations, +6.5 mins:## confirmed 1 attribute: X210909_x_at;## still have 114 attributes left.## 199. run of importance source...print(boruta)## Boruta performed 199 iterations in 6.471338 mins.
## 107 attributes confirmed important: X200606_at, X200734_s_at,
## X200882_s_at, X200910_at, X200954_at and 102 more;
## 22056 attributes confirmed unimportant: AFFX.BioB.3_at,
## AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and
## 22051 more;
## 114 tentative attributes left: X200021_at, X200062_s_at, X200711_s_at,
## X200843_s_at, X201088_at and 109 more;This very high number of features cannot be visualized, so a smaller proportion will be selected (with all the important and tentative features along with some of the unimportant features included), in order to better understand how this algorithm selection work.
In the boruta plot below, the tentative features are shown in yellow to be around the blue shadow max, with the unimportant features (in red) significantly below shadow max.
count=1
d = df[2]
for (i in 3:ncol(df)){
if((as.numeric(boruta$finalDecision[i])==1|| as.numeric(boruta$finalDecision[i])==2 || as.numeric(boruta$finalDecision[i])==3) & count<300){
count=count+1
d=cbind(d,df[,i])
colnames(d)[count]=colnames(df)[i]
}}
b = Boruta(y=d[,1], x =d[,2:ncol(d)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## After 15 iterations, +16 secs:## confirmed 45 attributes: X1431_at, X1494_f_at, X200007_at, X200014_s_at, X200020_at and 40 more;## rejected 143 attributes: X1007_s_at, X1053_at, X117_at, X121_at, X1255_g_at and 138 more;## still have 111 attributes left.## 16. run of importance source...## 17. run of importance source...## 18. run of importance source...## 19. run of importance source...## 20. run of importance source...## After 20 iterations, +19 secs:## confirmed 2 attributes: X200077_s_at, X200609_s_at;## rejected 8 attributes: X200019_s_at, X200099_s_at, X200619_at, X200653_s_at, X200655_s_at and 3 more;## still have 101 attributes left.## 21. run of importance source...## 22. run of importance source...## 23. run of importance source...## After 23 iterations, +20 secs:## confirmed 6 attributes: X200039_s_at, X200058_s_at, X200066_at, X200075_s_at, X200597_at and 1 more;## rejected 3 attributes: X200599_s_at, X200600_at, X200665_s_at;## still have 92 attributes left.## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## 27. run of importance source...## After 27 iterations, +22 secs:## confirmed 1 attribute: X200085_s_at;## rejected 4 attributes: X200678_x_at, X200732_s_at, X200737_at, X200759_x_at;## still have 87 attributes left.## 28. run of importance source...## 29. run of importance source...## 30. run of importance source...## After 30 iterations, +24 secs:## confirmed 3 attributes: X200045_at, X200093_s_at, X200736_s_at;## rejected 1 attribute: X200004_at;## still have 83 attributes left.## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## After 33 iterations, +25 secs:## confirmed 2 attributes: X200063_s_at, X200763_s_at;## rejected 5 attributes: X200018_at, X200026_at, X200047_s_at, X200049_at, X200682_s_at;## still have 76 attributes left.## 34. run of importance source...## 35. run of importance source...## 36. run of importance source...## 37. run of importance source...## After 37 iterations, +27 secs:## confirmed 5 attributes: X200046_at, X200601_at, X200648_s_at, X200667_at, X200743_s_at;## still have 71 attributes left.## 38. run of importance source...## 39. run of importance source...## 40. run of importance source...## After 40 iterations, +29 secs:## confirmed 1 attribute: X200629_at;## rejected 1 attribute: X200638_s_at;## still have 69 attributes left.## 41. run of importance source...## 42. run of importance source...## 43. run of importance source...## After 43 iterations, +30 secs:## confirmed 1 attribute: X200610_s_at;## still have 68 attributes left.## 44. run of importance source...## 45. run of importance source...## 46. run of importance source...## 47. run of importance source...## 48. run of importance source...## After 48 iterations, +33 secs:## confirmed 1 attribute: X200697_at;## still have 67 attributes left.## 49. run of importance source...## 50. run of importance source...## 51. run of importance source...## After 51 iterations, +34 secs:## confirmed 2 attributes: X200082_s_at, X200642_at;## still have 65 attributes left.## 52. run of importance source...## 53. run of importance source...## 54. run of importance source...## After 54 iterations, +36 secs:## confirmed 2 attributes: X200726_at, X200735_x_at;## rejected 2 attributes: X200632_s_at, X200709_at;## still have 61 attributes left.## 55. run of importance source...## 56. run of importance source...## 57. run of importance source...## After 57 iterations, +38 secs:## confirmed 1 attribute: X200098_s_at;## still have 60 attributes left.## 58. run of importance source...## 59. run of importance source...## After 59 iterations, +39 secs:## confirmed 1 attribute: X177_at;## still have 59 attributes left.## 60. run of importance source...## 61. run of importance source...## 62. run of importance source...## 63. run of importance source...## 64. run of importance source...## 65. run of importance source...## After 65 iterations, +42 secs:## confirmed 4 attributes: X200084_at, X200663_at, X200718_s_at, X200749_at;## rejected 1 attribute: X200754_x_at;## still have 54 attributes left.## 66. run of importance source...## 67. run of importance source...## 68. run of importance source...## After 68 iterations, +44 secs:## confirmed 1 attribute: X200740_s_at;## rejected 1 attribute: X200618_at;## still have 52 attributes left.## 69. run of importance source...## 70. run of importance source...## 71. run of importance source...## 72. run of importance source...## 73. run of importance source...## After 73 iterations, +46 secs:## rejected 6 attributes: X200040_at, X200070_at, X200616_s_at, X200625_s_at, X200681_at and 1 more;## still have 46 attributes left.## 74. run of importance source...## 75. run of importance source...## After 75 iterations, +47 secs:## rejected 3 attributes: X200034_s_at, X200097_s_at, X200715_x_at;## still have 43 attributes left.## 76. run of importance source...## 77. run of importance source...## 78. run of importance source...## 79. run of importance source...## 80. run of importance source...## 81. run of importance source...## 82. run of importance source...## 83. run of importance source...## After 83 iterations, +52 secs:## rejected 1 attribute: X200723_s_at;## still have 42 attributes left.## 84. run of importance source...## 85. run of importance source...## 86. run of importance source...## 87. run of importance source...## 88. run of importance source...## 89. run of importance source...## 90. run of importance source...## 91. run of importance source...## 92. run of importance source...## 93. run of importance source...## After 93 iterations, +56 secs:## confirmed 1 attribute: X200050_at;## still have 41 attributes left.## 94. run of importance source...## 95. run of importance source...## 96. run of importance source...## 97. run of importance source...## 98. run of importance source...## 99. run of importance source...## 100. run of importance source...## 101. run of importance source...## After 101 iterations, +59 secs:## confirmed 1 attribute: X200731_s_at;## still have 40 attributes left.## 102. run of importance source...## 103. run of importance source...## After 103 iterations, +60 secs:## confirmed 2 attributes: X200030_s_at, X200720_s_at;## still have 38 attributes left.## 104. run of importance source...## 105. run of importance source...## 106. run of importance source...## After 106 iterations, +1 mins:## confirmed 2 attributes: X200029_at, X200060_s_at;## still have 36 attributes left.## 107. run of importance source...## 108. run of importance source...## After 108 iterations, +1 mins:## confirmed 2 attributes: X200630_x_at, X200631_s_at;## still have 34 attributes left.## 109. run of importance source...## 110. run of importance source...## 111. run of importance source...## After 111 iterations, +1.1 mins:## confirmed 1 attribute: X200694_s_at;## still have 33 attributes left.## 112. run of importance source...## 113. run of importance source...## 114. run of importance source...## 115. run of importance source...## 116. run of importance source...## 117. run of importance source...## 118. run of importance source...## After 118 iterations, +1.1 mins:## rejected 1 attribute: X200738_s_at;## still have 32 attributes left.## 119. run of importance source...## 120. run of importance source...## 121. run of importance source...## 122. run of importance source...## 123. run of importance source...## 124. run of importance source...## 125. run of importance source...## 126. run of importance source...## After 126 iterations, +1.1 mins:## rejected 1 attribute: X200640_at;## still have 31 attributes left.## 127. run of importance source...## 128. run of importance source...## 129. run of importance source...## 130. run of importance source...## 131. run of importance source...## 132. run of importance source...## 133. run of importance source...## After 133 iterations, +1.2 mins:## confirmed 1 attribute: X200607_s_at;## still have 30 attributes left.## 134. run of importance source...## 135. run of importance source...## After 135 iterations, +1.2 mins:## rejected 1 attribute: X200044_at;## still have 29 attributes left.## 136. run of importance source...## 137. run of importance source...## 138. run of importance source...## 139. run of importance source...## 140. run of importance source...## 141. run of importance source...## 142. run of importance source...## 143. run of importance source...## 144. run of importance source...## 145. run of importance source...## 146. run of importance source...## 147. run of importance source...## 148. run of importance source...## 149. run of importance source...## 150. run of importance source...## 151. run of importance source...## 152. run of importance source...## After 152 iterations, +1.3 mins:## rejected 1 attribute: X200036_s_at;## still have 28 attributes left.## 153. run of importance source...## 154. run of importance source...## 155. run of importance source...## After 155 iterations, +1.3 mins:## rejected 1 attribute: X200078_s_at;## still have 27 attributes left.## 156. run of importance source...## 157. run of importance source...## 158. run of importance source...## 159. run of importance source...## 160. run of importance source...## 161. run of importance source...## 162. run of importance source...## 163. run of importance source...## 164. run of importance source...## 165. run of importance source...## 166. run of importance source...## 167. run of importance source...## 168. run of importance source...## 169. run of importance source...## 170. run of importance source...## 171. run of importance source...## 172. run of importance source...## 173. run of importance source...## 174. run of importance source...## 175. run of importance source...## 176. run of importance source...## After 176 iterations, +1.4 mins:## confirmed 1 attribute: X200001_at;## still have 26 attributes left.## 177. run of importance source...## 178. run of importance source...## 179. run of importance source...## 180. run of importance source...## 181. run of importance source...## 182. run of importance source...## 183. run of importance source...## 184. run of importance source...## 185. run of importance source...## 186. run of importance source...## 187. run of importance source...## 188. run of importance source...## 189. run of importance source...## 190. run of importance source...## 191. run of importance source...## 192. run of importance source...## 193. run of importance source...## 194. run of importance source...## 195. run of importance source...## 196. run of importance source...## 197. run of importance source...## 198. run of importance source...## 199. run of importance source...## After 199 iterations, +1.5 mins:## rejected 1 attribute: X200086_s_at;## still have 25 attributes left.plot(b,las=2,ces.axis=0.7)
An alternative visualization approach allowing for the visualization of the whole set of features is possible with the important history plot, which reflect the attributes importance per run. It can be seen that most unimportant features are classified as such in the first dozens of runs, which can be confirmed from following the selection process after each run, where after around 20 to 30 runs more then 20000 genes were classified as unimportant and the following runs had a much slower pace of selection, only classifying a handful of genes as important or not, with many runs without any classification output.
This is likely to be due to the fact that most genes in the data set are irrelevant for the classification task, so they are all eliminated after a few runs, with the rest of the runs focusing on the 200-300 left genes which are more challenging to classify. This is confirmed through the fact that most of these 200-300 genes are still classified as tentative after 200 runs. Increasing the number of runs will allow for a more precise classification for these tentative features. Yet since 89 genes are already classified as important after 200 runs (thus they are the most important even if other tentative genes are to be found important after more runs), there is no need to look for more important genes.
plotImpHistory(boruta)
Also the tentative features may be taken with the important features, but since the number of important features in this case is already likely to be enough for good predictions, only the important features will be further considered.
boruta.bank <- TentativeRoughFix(boruta)
print(boruta.bank)## Boruta performed 199 iterations in 6.471338 mins.
## Tentatives roughfixed over the last 199 iterations.
## 194 attributes confirmed important: X200021_at, X200606_at,
## X200711_s_at, X200734_s_at, X200843_s_at and 189 more;
## 22083 attributes confirmed unimportant: AFFX.BioB.3_at,
## AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and
## 22078 more;To this end a new dataset with those features (genes) only will be created.
list = getSelectedAttributes(boruta, withTentative = F)
new_df=as.data.frame(df$type)
v=c()
current=2
for (i in 1:ncol(df)){
for(j in 1:length(list)){
if(colnames(df)[i]==list[j]){
new_df=cbind(new_df,df[,i])
v=cbind(v,colnames(df)[i])
colnames(new_df)[current]=colnames(df)[i]
current=current+1
break
}
}
}
colnames(new_df)[1]='type'
ncol(new_df)## [1] 108One important observation is the high stability of boruta selection, despite its reliance on random forest. Running Boruta many times will give almost perfectly similar results.
Even running boruta again on this new dataset will conserve all the features as important.
boruta2 <- Boruta(y=as.factor(new_df[,1]), x =new_df[,2:ncol(new_df)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## 13. run of importance source...## 14. run of importance source...## After 14 iterations, +3.8 secs:## confirmed 85 attributes: X200606_at, X200734_s_at, X200882_s_at, X200910_at, X200954_at and 80 more;## still have 22 attributes left.## 15. run of importance source...## 16. run of importance source...## 17. run of importance source...## 18. run of importance source...## After 18 iterations, +4.8 secs:## confirmed 18 attributes: X201527_at, X201531_at, X201584_s_at, X202940_at, X205086_s_at and 13 more;## still have 4 attributes left.## 19. run of importance source...## 20. run of importance source...## 21. run of importance source...## 22. run of importance source...## After 22 iterations, +5.7 secs:## confirmed 1 attribute: X207330_at;## still have 3 attributes left.## 23. run of importance source...## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## 27. run of importance source...## 28. run of importance source...## After 28 iterations, +8.5 secs:## confirmed 1 attribute: X203755_at;## still have 2 attributes left.## 29. run of importance source...## 30. run of importance source...## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## 34. run of importance source...## 35. run of importance source...## 36. run of importance source...## 37. run of importance source...## 38. run of importance source...## 39. run of importance source...## 40. run of importance source...## After 40 iterations, +12 secs:## confirmed 2 attributes: X209335_at, X210095_s_at;## no more attributes left.print(boruta2)## Boruta performed 40 iterations in 12.23928 secs.
## 107 attributes confirmed important: X200606_at, X200734_s_at,
## X200882_s_at, X200910_at, X200954_at and 102 more;
## No attributes deemed unimportant.plot(boruta2,las = 2, cex.axis = 0.7)
It can be seen that using only yhe most important gene to build a simple
logistic regression model will result in very good accuracy, especially
if compoared to anohter models build using some unimportant gene.
m=glm(type~X218002_s_at,df,family=binomial())
summary(m)##
## Call:
## glm(formula = type ~ X218002_s_at, family = binomial(), data = df)
##
## Deviance Residuals:
## Min 1Q Median 3Q Max
## -3.0790 -0.2153 -0.1338 0.2363 2.8520
##
## Coefficients:
## Estimate Std. Error z value Pr(>|z|)
## (Intercept) -9.9358 1.0146 -9.793 <2e-16 ***
## X218002_s_at 1.9471 0.1899 10.253 <2e-16 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## (Dispersion parameter for binomial family taken to be 1)
##
## Null deviance: 494.84 on 356 degrees of freedom
## Residual deviance: 123.94 on 355 degrees of freedom
## AIC: 127.94
##
## Number of Fisher Scoring iterations: 6m=glm(type~X209560_s_at,df,family=binomial())
summary(m)##
## Call:
## glm(formula = type ~ X209560_s_at, family = binomial(), data = df)
##
## Deviance Residuals:
## Min 1Q Median 3Q Max
## -1.3682 -1.2918 -0.3461 1.0542 2.1127
##
## Coefficients:
## Estimate Std. Error z value Pr(>|z|)
## (Intercept) 1.39828 0.27026 5.174 2.29e-07 ***
## X209560_s_at -0.31433 0.05928 -5.302 1.14e-07 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## (Dispersion parameter for binomial family taken to be 1)
##
## Null deviance: 494.84 on 356 degrees of freedom
## Residual deviance: 449.91 on 355 degrees of freedom
## AIC: 453.91
##
## Number of Fisher Scoring iterations: 4df %>% ggplot()+
geom_density(aes(X218002_s_at,group=type,fill=type,alpha=0.5))
df %>% ggplot()+
geom_density(aes(X220114_s_at,group=type,fill=type,alpha=0.5))
df %>% ggplot()+
geom_density(aes(X218061_at,group=type,fill=type,alpha=0.5))
df %>% ggplot()+
geom_density(aes(X220148_at,group=type,fill=type,alpha=0.5))
A quick inspection of the genes selected as the most important will reflect the reason for that classification. It has been noticed in phase II that when the genes with highest variance were selected, inspecting the plots showed that in most cases those genes had high variance across HCC cases with most of the normal cases concentrated in very narrow ranges (as can be seen for the 4th gene X220148_at here), yet very small disturbances were also seen in those genes plots (they also can be seen in the 4th plotted gene) where a very small number of normal cases will have their expression of the considered gene significantly deviating from normal entering into the region that would have otherwise been restricted for HCC cases allowing very good separation. This will result in a good accuracy for normal cases classification, yet a worse accuracy when it comes to HCC cases (false negative proportion will be much higher than that of false positive).
Here it can be seen that genes showing different patterns are selected along with those displaying the previously found pattern. The first 2 genes show a similar pattern which is reversed, the HCC cases are all concentrated in a small region with small exceptions forming disturbances into the region which would have been otherwise restricted for the normal cases.
Combining these 2 types of genes will allow for a better separation and more accurate classification for both normal and HCC cases, while relying on only one of them is likely to result in more accurate classifications for either of them only. This effect is clearly reflected using the simple logistic regression models below. Using the 4th gene only 23 HCC cases are mistakenly classified as normal, while only 9 normal cases are classified as HCC.
m=glm(type~X220148_at,df,family=binomial())
summary(m)##
## Call:
## glm(formula = type ~ X220148_at, family = binomial(), data = df)
##
## Deviance Residuals:
## Min 1Q Median 3Q Max
## -2.7717 -0.0824 0.0000 0.3894 4.5675
##
## Coefficients:
## Estimate Std. Error z value Pr(>|z|)
## (Intercept) -43.410 5.263 -8.248 <2e-16 ***
## X220148_at 4.269 0.508 8.404 <2e-16 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## (Dispersion parameter for binomial family taken to be 1)
##
## Null deviance: 494.84 on 356 degrees of freedom
## Residual deviance: 165.22 on 355 degrees of freedom
## AIC: 169.22
##
## Number of Fisher Scoring iterations: 8probs <- predict(m, type = "response")
pred <- rep("HCC",nrow(df))
pred[probs > 0.5] <- "normal"
t = confusionMatrix(as.factor(pred), reference=as.factor(df$type))
t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 158 9
## normal 23 167
##
## Accuracy : 0.9104
## 95% CI : (0.8758, 0.9379)
## No Information Rate : 0.507
## P-Value [Acc > NIR] : < 2e-16
##
## Kappa : 0.8209
##
## Mcnemar's Test P-Value : 0.02156
##
## Sensitivity : 0.8729
## Specificity : 0.9489
## Pos Pred Value : 0.9461
## Neg Pred Value : 0.8789
## Prevalence : 0.5070
## Detection Rate : 0.4426
## Detection Prevalence : 0.4678
## Balanced Accuracy : 0.9109
##
## 'Positive' Class : HCC
## Yet, by only adding the 1st gene to the model, the accuracy will significantly increase (considering th AIC), and the previous discrepancy in false positive and false negative errors will be reduced.
m=glm(type~X218002_s_at+X220114_s_at,df,family=binomial())
summary(m)##
## Call:
## glm(formula = type ~ X218002_s_at + X220114_s_at, family = binomial(),
## data = df)
##
## Deviance Residuals:
## Min 1Q Median 3Q Max
## -3.1429 -0.1922 -0.0932 0.1682 3.1647
##
## Coefficients:
## Estimate Std. Error z value Pr(>|z|)
## (Intercept) -15.1982 1.8663 -8.143 3.84e-16 ***
## X218002_s_at 1.1499 0.2386 4.818 1.45e-06 ***
## X220114_s_at 1.9653 0.4766 4.123 3.73e-05 ***
## ---
## Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
##
## (Dispersion parameter for binomial family taken to be 1)
##
## Null deviance: 494.84 on 356 degrees of freedom
## Residual deviance: 102.37 on 354 degrees of freedom
## AIC: 108.37
##
## Number of Fisher Scoring iterations: 7probs <- predict(m, type = "response")
pred <- rep("HCC",nrow(df))
pred[probs > 0.5] <- "normal"
t = confusionMatrix(as.factor(pred), reference=as.factor(df$type))
t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 172 6
## normal 9 170
##
## Accuracy : 0.958
## 95% CI : (0.9316, 0.9763)
## No Information Rate : 0.507
## P-Value [Acc > NIR] : <2e-16
##
## Kappa : 0.916
##
## Mcnemar's Test P-Value : 0.6056
##
## Sensitivity : 0.9503
## Specificity : 0.9659
## Pos Pred Value : 0.9663
## Neg Pred Value : 0.9497
## Prevalence : 0.5070
## Detection Rate : 0.4818
## Detection Prevalence : 0.4986
## Balanced Accuracy : 0.9581
##
## 'Positive' Class : HCC
## It can also be seen that other genes not following these 2 patterns are also selected, for example the 3rd gene X28061_at does not allow for a separation that is as good as the other ones, yet it is a special case where the HCC cases are shown to get to an abnormally high levels of expression not reached by any normal cases.
So overall, it is to be expected that this selection approach combines genes with different patterns of density across cases, which will contribute differently to the classification process allowing almost perfect predictions. Simply selecting genes based on their variance does not offer as much accuracy because it will not be able to capture as much genes complementing each other to give better results.
This last point can be illustrated by the fact that the investigation of the most important genes selected by Boruta will not show any clear linearties and relationships, which was shown to be the case when the genes with highest variance were selected in phase II.
pairs(new_df[2:20])
Also, considering the variability over the different classes to try to control the selection process allowing for such complementation will be shown not be efficient in the next part.
(1.2) Using Boruta for Phase II considerations
This boruta selection approach may be used to investigate the effects of different types of normalization, as intended before (phase II). It might as well be used to assess how good the previously considered gene selection approaches were, which was already started above.
(1.2.1) Normalization effect
b_S = Boruta(y=as.factor(df_S[,2]), x =df_S[,3:ncol(df_S)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## 16. run of importance source...## 17. run of importance source...## 18. run of importance source...## 19. run of importance source...## 20. run of importance source...## 21. run of importance source...## 22. run of importance source...## After 22 iterations, +3.7 mins:## confirmed 2 attributes: X209365_s_at, X218002_s_at;## rejected 21540 attributes: AFFX.BioB.3_at, AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and 21535 more;## still have 735 attributes left.## 23. run of importance source...## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## After 26 iterations, +3.8 mins:## confirmed 3 attributes: X207804_s_at, X210481_s_at, X220114_s_at;## rejected 244 attributes: X200007_at, X200025_s_at, X200028_s_at, X200037_s_at, X200055_at and 239 more;## still have 488 attributes left.## 27. run of importance source...## 28. run of importance source...## 29. run of importance source...## 30. run of importance source...## After 30 iterations, +3.8 mins:## confirmed 7 attributes: X200910_at, X203554_x_at, X205019_s_at, X212554_at, X217165_x_at and 2 more;## rejected 80 attributes: X1494_f_at, X200064_at, X200652_at, X200765_x_at, X200885_at and 75 more;## still have 401 attributes left.## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## 34. run of importance source...## After 34 iterations, +3.9 mins:## confirmed 2 attributes: X205866_at, X207995_s_at;## rejected 56 attributes: X200043_at, X200057_s_at, X200661_at, X200829_x_at, X200947_s_at and 51 more;## still have 343 attributes left.## 35. run of importance source...## 36. run of importance source...## 37. run of importance source...## 38. run of importance source...## After 38 iterations, +3.9 mins:## confirmed 1 attribute: X205911_at;## rejected 29 attributes: X200068_s_at, X200708_at, X202144_s_at, X202366_at, X202422_s_at and 24 more;## still have 313 attributes left.## 39. run of importance source...## 40. run of importance source...## 41. run of importance source...## After 41 iterations, +3.9 mins:## confirmed 1 attribute: X220148_at;## rejected 28 attributes: X201771_at, X201956_s_at, X202276_at, X202983_at, X202992_at and 23 more;## still have 284 attributes left.## 42. run of importance source...## 43. run of importance source...## 44. run of importance source...## 45. run of importance source...## After 45 iterations, +4 mins:## confirmed 4 attributes: X204428_s_at, X204641_at, X206380_s_at, X220496_at;## rejected 23 attributes: X201112_s_at, X201326_at, X201425_at, X201472_at, X202025_x_at and 18 more;## still have 257 attributes left.## 46. run of importance source...## 47. run of importance source...## 48. run of importance source...## After 48 iterations, +4 mins:## confirmed 3 attributes: X203316_s_at, X212551_at, X218061_at;## rejected 12 attributes: X200792_at, X201252_at, X201890_at, X201893_x_at, X206102_at and 7 more;## still have 242 attributes left.## 49. run of importance source...## 50. run of importance source...## 51. run of importance source...## After 51 iterations, +4 mins:## confirmed 2 attributes: X201453_x_at, X206680_at;## rejected 5 attributes: X209531_at, X213478_at, X218350_s_at, X219148_at, X220186_s_at;## still have 235 attributes left.## 52. run of importance source...## 53. run of importance source...## 54. run of importance source...## After 54 iterations, +4 mins:## confirmed 2 attributes: X206453_s_at, X207609_s_at;## rejected 10 attributes: X202824_s_at, X204244_s_at, X204745_x_at, X204825_at, X206753_at and 5 more;## still have 223 attributes left.## 55. run of importance source...## 56. run of importance source...## 57. run of importance source...## After 57 iterations, +4 mins:## rejected 6 attributes: X200052_s_at, X208694_at, X213832_at, X216336_x_at, X218233_s_at and 1 more;## still have 217 attributes left.## 58. run of importance source...## 59. run of importance source...## 60. run of importance source...## After 60 iterations, +4.1 mins:## confirmed 3 attributes: X201293_x_at, X209219_at, X214710_s_at;## rejected 4 attributes: X207165_at, X218728_s_at, X218755_at, X218768_at;## still have 210 attributes left.## 61. run of importance source...## 62. run of importance source...## 63. run of importance source...## After 63 iterations, +4.1 mins:## confirmed 2 attributes: X212661_x_at, X220017_x_at;## rejected 4 attributes: X206305_s_at, X210460_s_at, X212143_s_at, X214274_s_at;## still have 204 attributes left.## 64. run of importance source...## 65. run of importance source...## 66. run of importance source...## After 66 iterations, +4.1 mins:## confirmed 1 attribute: X36829_at;## rejected 3 attributes: X201714_at, X204962_s_at, X209470_s_at;## still have 200 attributes left.## 67. run of importance source...## 68. run of importance source...## 69. run of importance source...## After 69 iterations, +4.1 mins:## confirmed 2 attributes: X201656_at, X205554_s_at;## rejected 2 attributes: X200783_s_at, X209714_s_at;## still have 196 attributes left.## 70. run of importance source...## 71. run of importance source...## 72. run of importance source...## After 72 iterations, +4.2 mins:## confirmed 2 attributes: X206643_at, X214421_x_at;## rejected 1 attribute: X211456_x_at;## still have 193 attributes left.## 73. run of importance source...## 74. run of importance source...## 75. run of importance source...## After 75 iterations, +4.2 mins:## confirmed 2 attributes: X213629_x_at, X216661_x_at;## rejected 2 attributes: X206629_at, X209044_x_at;## still have 189 attributes left.## 76. run of importance source...## 77. run of importance source...## After 77 iterations, +4.2 mins:## confirmed 4 attributes: X201128_s_at, X205440_s_at, X205890_s_at, X217319_x_at;## rejected 2 attributes: X202184_s_at, X209687_at;## still have 183 attributes left.## 78. run of importance source...## 79. run of importance source...## 80. run of importance source...## After 80 iterations, +4.2 mins:## confirmed 1 attribute: X202861_at;## rejected 3 attributes: X203358_s_at, X203666_at, X214180_at;## still have 179 attributes left.## 81. run of importance source...## 82. run of importance source...## 83. run of importance source...## After 83 iterations, +4.2 mins:## confirmed 1 attribute: X217521_at;## still have 178 attributes left.## 84. run of importance source...## 85. run of importance source...## 86. run of importance source...## After 86 iterations, +4.3 mins:## confirmed 2 attributes: X202963_at, X207828_s_at;## rejected 3 attributes: X204023_at, X213661_at, X221923_s_at;## still have 173 attributes left.## 87. run of importance source...## 88. run of importance source...## 89. run of importance source...## After 89 iterations, +4.3 mins:## confirmed 3 attributes: X208079_s_at, X211745_x_at, X212149_at;## rejected 1 attribute: X210233_at;## still have 169 attributes left.## 90. run of importance source...## 91. run of importance source...## After 91 iterations, +4.3 mins:## confirmed 1 attribute: X200882_s_at;## rejected 1 attribute: X222077_s_at;## still have 167 attributes left.## 92. run of importance source...## 93. run of importance source...## 94. run of importance source...## 95. run of importance source...## 96. run of importance source...## 97. run of importance source...## After 97 iterations, +4.3 mins:## confirmed 3 attributes: X200734_s_at, X209447_at, X215768_at;## rejected 1 attribute: X39763_at;## still have 163 attributes left.## 98. run of importance source...## 99. run of importance source...## After 99 iterations, +4.4 mins:## confirmed 2 attributes: X202737_s_at, X213068_at;## rejected 2 attributes: X218595_s_at, X221570_s_at;## still have 159 attributes left.## 100. run of importance source...## 101. run of importance source...## 102. run of importance source...## After 102 iterations, +4.4 mins:## confirmed 1 attribute: X222139_at;## still have 158 attributes left.## 103. run of importance source...## 104. run of importance source...## 105. run of importance source...## After 105 iterations, +4.4 mins:## confirmed 1 attribute: X202541_at;## still have 157 attributes left.## 106. run of importance source...## 107. run of importance source...## After 107 iterations, +4.4 mins:## confirmed 1 attribute: X209458_x_at;## rejected 1 attribute: X201587_s_at;## still have 155 attributes left.## 108. run of importance source...## 109. run of importance source...## 110. run of importance source...## After 110 iterations, +4.4 mins:## confirmed 3 attributes: X201584_s_at, X204301_at, X207262_at;## still have 152 attributes left.## 111. run of importance source...## 112. run of importance source...## 113. run of importance source...## After 113 iterations, +4.4 mins:## confirmed 3 attributes: X205858_at, X208147_s_at, X220116_at;## still have 149 attributes left.## 114. run of importance source...## 115. run of importance source...## After 115 iterations, +4.5 mins:## confirmed 5 attributes: X204977_at, X205531_s_at, X211628_x_at, X211978_x_at, X216025_x_at;## rejected 1 attribute: X200749_at;## still have 143 attributes left.## 116. run of importance source...## 117. run of importance source...## 118. run of importance source...## After 118 iterations, +4.5 mins:## confirmed 3 attributes: X205392_s_at, X207076_s_at, X215138_s_at;## still have 140 attributes left.## 119. run of importance source...## 120. run of importance source...## After 120 iterations, +4.5 mins:## confirmed 3 attributes: X209821_at, X217365_at, X217414_x_at;## still have 137 attributes left.## 121. run of importance source...## 122. run of importance source...## 123. run of importance source...## After 123 iterations, +4.5 mins:## confirmed 2 attributes: X207218_at, X215330_at;## still have 135 attributes left.## 124. run of importance source...## 125. run of importance source...## 126. run of importance source...## After 126 iterations, +4.5 mins:## confirmed 1 attribute: X211699_x_at;## still have 134 attributes left.## 127. run of importance source...## 128. run of importance source...## After 128 iterations, +4.5 mins:## confirmed 2 attributes: X201527_at, X201577_at;## still have 132 attributes left.## 129. run of importance source...## 130. run of importance source...## 131. run of importance source...## After 131 iterations, +4.6 mins:## confirmed 2 attributes: X205819_at, X221159_at;## still have 130 attributes left.## 132. run of importance source...## 133. run of importance source...## 134. run of importance source...## 135. run of importance source...## 136. run of importance source...## After 136 iterations, +4.6 mins:## confirmed 1 attribute: X218189_s_at;## still have 129 attributes left.## 137. run of importance source...## 138. run of importance source...## After 138 iterations, +4.6 mins:## confirmed 1 attribute: X209189_at;## still have 128 attributes left.## 139. run of importance source...## 140. run of importance source...## 141. run of importance source...## After 141 iterations, +4.6 mins:## rejected 1 attribute: X207584_at;## still have 127 attributes left.## 142. run of importance source...## 143. run of importance source...## 144. run of importance source...## 145. run of importance source...## 146. run of importance source...## After 146 iterations, +4.7 mins:## confirmed 1 attribute: X211780_x_at;## rejected 1 attribute: X207608_x_at;## still have 125 attributes left.## 147. run of importance source...## 148. run of importance source...## After 148 iterations, +4.7 mins:## confirmed 1 attribute: X200606_at;## rejected 1 attribute: X201291_s_at;## still have 123 attributes left.## 149. run of importance source...## 150. run of importance source...## 151. run of importance source...## After 151 iterations, +4.7 mins:## confirmed 1 attribute: X207330_at;## still have 122 attributes left.## 152. run of importance source...## 153. run of importance source...## After 153 iterations, +4.7 mins:## confirmed 1 attribute: X209825_s_at;## still have 121 attributes left.## 154. run of importance source...## 155. run of importance source...## 156. run of importance source...## After 156 iterations, +4.7 mins:## confirmed 3 attributes: X204018_x_at, X205086_s_at, X214414_x_at;## still have 118 attributes left.## 157. run of importance source...## 158. run of importance source...## 159. run of importance source...## 160. run of importance source...## 161. run of importance source...## After 161 iterations, +4.7 mins:## confirmed 3 attributes: X201184_s_at, X201398_s_at, X205306_x_at;## still have 115 attributes left.## 162. run of importance source...## 163. run of importance source...## After 163 iterations, +4.8 mins:## confirmed 1 attribute: X201088_at;## rejected 1 attribute: X205225_at;## still have 113 attributes left.## 164. run of importance source...## 165. run of importance source...## 166. run of importance source...## After 166 iterations, +4.8 mins:## confirmed 1 attribute: X201531_at;## rejected 1 attribute: X209711_at;## still have 111 attributes left.## 167. run of importance source...## 168. run of importance source...## After 168 iterations, +4.8 mins:## confirmed 1 attribute: X208816_x_at;## still have 110 attributes left.## 169. run of importance source...## 170. run of importance source...## 171. run of importance source...## After 171 iterations, +4.8 mins:## confirmed 1 attribute: X213373_s_at;## still have 109 attributes left.## 172. run of importance source...## 173. run of importance source...## After 173 iterations, +4.8 mins:## confirmed 1 attribute: X201441_at;## still have 108 attributes left.## 174. run of importance source...## 175. run of importance source...## 176. run of importance source...## 177. run of importance source...## 178. run of importance source...## 179. run of importance source...## 180. run of importance source...## 181. run of importance source...## After 181 iterations, +4.9 mins:## rejected 1 attribute: X202580_x_at;## still have 107 attributes left.## 182. run of importance source...## 183. run of importance source...## After 183 iterations, +4.9 mins:## rejected 1 attribute: X210105_s_at;## still have 106 attributes left.## 184. run of importance source...## 185. run of importance source...## 186. run of importance source...## After 186 iterations, +4.9 mins:## rejected 1 attribute: X200062_s_at;## still have 105 attributes left.## 187. run of importance source...## 188. run of importance source...## 189. run of importance source...## 190. run of importance source...## 191. run of importance source...## After 191 iterations, +4.9 mins:## rejected 1 attribute: X208822_s_at;## still have 104 attributes left.## 192. run of importance source...## 193. run of importance source...## 194. run of importance source...## 195. run of importance source...## 196. run of importance source...## 197. run of importance source...## 198. run of importance source...## 199. run of importance source...b_M = Boruta(y=as.factor(df_M[,2]), x =df_M[,3:ncol(df_M)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## 16. run of importance source...## 17. run of importance source...## 18. run of importance source...## 19. run of importance source...## 20. run of importance source...## 21. run of importance source...## 22. run of importance source...## After 22 iterations, +3.8 mins:## confirmed 1 attribute: X207804_s_at;## rejected 21506 attributes: AFFX.BioB.3_at, AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and 21501 more;## still have 770 attributes left.## 23. run of importance source...## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## After 26 iterations, +3.9 mins:## confirmed 5 attributes: X203554_x_at, X205019_s_at, X209365_s_at, X218002_s_at, X220114_s_at;## rejected 253 attributes: X1431_at, X200027_at, X200037_s_at, X200043_at, X200053_at and 248 more;## still have 512 attributes left.## 27. run of importance source...## 28. run of importance source...## 29. run of importance source...## 30. run of importance source...## After 30 iterations, +3.9 mins:## confirmed 4 attributes: X200910_at, X210481_s_at, X212554_at, X218061_at;## rejected 98 attributes: X200068_s_at, X200661_at, X200885_at, X200947_s_at, X200992_at and 93 more;## still have 410 attributes left.## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## 34. run of importance source...## After 34 iterations, +3.9 mins:## confirmed 3 attributes: X203316_s_at, X204641_at, X220496_at;## rejected 56 attributes: X200999_s_at, X201077_s_at, X201326_at, X201930_at, X202020_s_at and 51 more;## still have 351 attributes left.## 35. run of importance source...## 36. run of importance source...## 37. run of importance source...## 38. run of importance source...## After 38 iterations, +4 mins:## confirmed 3 attributes: X205911_at, X206380_s_at, X212661_x_at;## rejected 26 attributes: X202246_s_at, X202635_s_at, X202824_s_at, X202846_s_at, X202992_at and 21 more;## still have 322 attributes left.## 39. run of importance source...## 40. run of importance source...## 41. run of importance source...## After 41 iterations, +4 mins:## confirmed 5 attributes: X201656_at, X204428_s_at, X207995_s_at, X209219_at, X219787_s_at;## rejected 26 attributes: X200064_at, X200652_at, X201327_s_at, X201524_x_at, X201555_at and 21 more;## still have 291 attributes left.## 42. run of importance source...## 43. run of importance source...## 44. run of importance source...## 45. run of importance source...## After 45 iterations, +4 mins:## confirmed 7 attributes: X201453_x_at, X206680_at, X207609_s_at, X207828_s_at, X216661_x_at and 2 more;## rejected 5 attributes: X205498_at, X213491_x_at, X218585_s_at, X218905_at, X336_at;## still have 279 attributes left.## 46. run of importance source...## 47. run of importance source...## 48. run of importance source...## After 48 iterations, +4.1 mins:## confirmed 3 attributes: X206453_s_at, X212551_at, X220017_x_at;## rejected 20 attributes: X200765_x_at, X201068_s_at, X202145_at, X202366_at, X203714_s_at and 15 more;## still have 256 attributes left.## 49. run of importance source...## 50. run of importance source...## 51. run of importance source...## After 51 iterations, +4.1 mins:## confirmed 1 attribute: X205866_at;## rejected 10 attributes: X200783_s_at, X201893_x_at, X203666_at, X210106_at, X211231_x_at and 5 more;## still have 245 attributes left.## 52. run of importance source...## 53. run of importance source...## 54. run of importance source...## After 54 iterations, +4.1 mins:## rejected 5 attributes: X201425_at, X202892_at, X203509_at, X204825_at, X208821_at;## still have 240 attributes left.## 55. run of importance source...## 56. run of importance source...## 57. run of importance source...## After 57 iterations, +4.1 mins:## rejected 9 attributes: X200052_s_at, X201252_at, X202868_s_at, X208581_x_at, X209044_x_at and 4 more;## still have 231 attributes left.## 58. run of importance source...## 59. run of importance source...## 60. run of importance source...## After 60 iterations, +4.1 mins:## confirmed 1 attribute: X36829_at;## rejected 7 attributes: X201400_at, X202184_s_at, X203429_s_at, X205053_at, X209160_at and 2 more;## still have 223 attributes left.## 61. run of importance source...## 62. run of importance source...## 63. run of importance source...## After 63 iterations, +4.1 mins:## rejected 8 attributes: X200788_s_at, X202503_s_at, X207584_at, X209523_at, X209714_s_at and 3 more;## still have 215 attributes left.## 64. run of importance source...## 65. run of importance source...## 66. run of importance source...## After 66 iterations, +4.2 mins:## confirmed 1 attribute: X200882_s_at;## rejected 3 attributes: X201112_s_at, X201291_s_at, X218106_s_at;## still have 211 attributes left.## 67. run of importance source...## 68. run of importance source...## 69. run of importance source...## After 69 iterations, +4.2 mins:## confirmed 1 attribute: X217319_x_at;## rejected 5 attributes: X200872_at, X206629_at, X209687_at, X213478_at, X220801_s_at;## still have 205 attributes left.## 70. run of importance source...## 71. run of importance source...## 72. run of importance source...## After 72 iterations, +4.2 mins:## confirmed 2 attributes: X202861_at, X205554_s_at;## still have 203 attributes left.## 73. run of importance source...## 74. run of importance source...## 75. run of importance source...## After 75 iterations, +4.2 mins:## confirmed 1 attribute: X201293_x_at;## rejected 2 attributes: X209064_x_at, X209840_s_at;## still have 200 attributes left.## 76. run of importance source...## 77. run of importance source...## After 77 iterations, +4.2 mins:## rejected 9 attributes: X203358_s_at, X204745_x_at, X205695_at, X210105_s_at, X210460_s_at and 4 more;## still have 191 attributes left.## 78. run of importance source...## 79. run of importance source...## 80. run of importance source...## After 80 iterations, +4.3 mins:## confirmed 1 attribute: X213629_x_at;## rejected 4 attributes: X202276_at, X220186_s_at, X221923_s_at, X222077_s_at;## still have 186 attributes left.## 81. run of importance source...## 82. run of importance source...## 83. run of importance source...## After 83 iterations, +4.3 mins:## confirmed 1 attribute: X212149_at;## rejected 1 attribute: X218768_at;## still have 184 attributes left.## 84. run of importance source...## 85. run of importance source...## 86. run of importance source...## After 86 iterations, +4.3 mins:## confirmed 3 attributes: X201128_s_at, X207076_s_at, X211745_x_at;## rejected 1 attribute: X209711_at;## still have 180 attributes left.## 87. run of importance source...## 88. run of importance source...## 89. run of importance source...## After 89 iterations, +4.3 mins:## confirmed 1 attribute: X200734_s_at;## rejected 1 attribute: X219543_at;## still have 178 attributes left.## 90. run of importance source...## 91. run of importance source...## After 91 iterations, +4.3 mins:## confirmed 1 attribute: X202737_s_at;## rejected 2 attributes: X204244_s_at, X206305_s_at;## still have 175 attributes left.## 92. run of importance source...## 93. run of importance source...## 94. run of importance source...## After 94 iterations, +4.3 mins:## confirmed 2 attributes: X202963_at, X205890_s_at;## still have 173 attributes left.## 95. run of importance source...## 96. run of importance source...## 97. run of importance source...## After 97 iterations, +4.4 mins:## rejected 1 attribute: X200062_s_at;## still have 172 attributes left.## 98. run of importance source...## 99. run of importance source...## After 99 iterations, +4.4 mins:## confirmed 3 attributes: X204301_at, X206643_at, X222139_at;## rejected 3 attributes: X201771_at, X211456_x_at, X214180_at;## still have 166 attributes left.## 100. run of importance source...## 101. run of importance source...## 102. run of importance source...## After 102 iterations, +4.4 mins:## rejected 1 attribute: X218921_at;## still have 165 attributes left.## 103. run of importance source...## 104. run of importance source...## 105. run of importance source...## After 105 iterations, +4.4 mins:## confirmed 4 attributes: X202541_at, X205440_s_at, X209458_x_at, X215768_at;## rejected 2 attributes: X206461_x_at, X212832_s_at;## still have 159 attributes left.## 106. run of importance source...## 107. run of importance source...## After 107 iterations, +4.4 mins:## confirmed 2 attributes: X211978_x_at, X220491_at;## rejected 1 attribute: X209470_s_at;## still have 156 attributes left.## 108. run of importance source...## 109. run of importance source...## 110. run of importance source...## 111. run of importance source...## 112. run of importance source...## 113. run of importance source...## After 113 iterations, +4.5 mins:## rejected 1 attribute: X204023_at;## still have 155 attributes left.## 114. run of importance source...## 115. run of importance source...## After 115 iterations, +4.5 mins:## rejected 1 attribute: X200877_at;## still have 154 attributes left.## 116. run of importance source...## 117. run of importance source...## 118. run of importance source...## After 118 iterations, +4.5 mins:## confirmed 1 attribute: X201584_s_at;## still have 153 attributes left.## 119. run of importance source...## 120. run of importance source...## After 120 iterations, +4.5 mins:## confirmed 2 attributes: X208079_s_at, X217521_at;## still have 151 attributes left.## 121. run of importance source...## 122. run of importance source...## 123. run of importance source...## 124. run of importance source...## 125. run of importance source...## 126. run of importance source...## After 126 iterations, +4.5 mins:## confirmed 1 attribute: X216025_x_at;## still have 150 attributes left.## 127. run of importance source...## 128. run of importance source...## After 128 iterations, +4.5 mins:## confirmed 2 attributes: X201577_at, X213068_at;## rejected 1 attribute: X201587_s_at;## still have 147 attributes left.## 129. run of importance source...## 130. run of importance source...## 131. run of importance source...## After 131 iterations, +4.6 mins:## rejected 1 attribute: X213832_at;## still have 146 attributes left.## 132. run of importance source...## 133. run of importance source...## After 133 iterations, +4.6 mins:## rejected 1 attribute: X217918_at;## still have 145 attributes left.## 134. run of importance source...## 135. run of importance source...## 136. run of importance source...## After 136 iterations, +4.6 mins:## confirmed 3 attributes: X205531_s_at, X207218_at, X211699_x_at;## still have 142 attributes left.## 137. run of importance source...## 138. run of importance source...## After 138 iterations, +4.6 mins:## confirmed 1 attribute: X204977_at;## rejected 2 attributes: X203213_at, X210233_at;## still have 139 attributes left.## 139. run of importance source...## 140. run of importance source...## 141. run of importance source...## 142. run of importance source...## 143. run of importance source...## After 143 iterations, +4.6 mins:## rejected 1 attribute: X200826_at;## still have 138 attributes left.## 144. run of importance source...## 145. run of importance source...## 146. run of importance source...## After 146 iterations, +4.6 mins:## confirmed 2 attributes: X205392_s_at, X209189_at;## still have 136 attributes left.## 147. run of importance source...## 148. run of importance source...## 149. run of importance source...## 150. run of importance source...## 151. run of importance source...## After 151 iterations, +4.7 mins:## confirmed 3 attributes: X214414_x_at, X214421_x_at, X215330_at;## still have 133 attributes left.## 152. run of importance source...## 153. run of importance source...## After 153 iterations, +4.7 mins:## confirmed 2 attributes: X211628_x_at, X217414_x_at;## still have 131 attributes left.## 154. run of importance source...## 155. run of importance source...## 156. run of importance source...## After 156 iterations, +4.7 mins:## confirmed 1 attribute: X205858_at;## rejected 1 attribute: X213931_at;## still have 129 attributes left.## 157. run of importance source...## 158. run of importance source...## 159. run of importance source...## 160. run of importance source...## 161. run of importance source...## 162. run of importance source...## 163. run of importance source...## 164. run of importance source...## 165. run of importance source...## 166. run of importance source...## After 166 iterations, +4.8 mins:## confirmed 1 attribute: X214710_s_at;## still have 128 attributes left.## 167. run of importance source...## 168. run of importance source...## 169. run of importance source...## 170. run of importance source...## 171. run of importance source...## After 171 iterations, +4.8 mins:## confirmed 1 attribute: X208147_s_at;## still have 127 attributes left.## 172. run of importance source...## 173. run of importance source...## After 173 iterations, +4.8 mins:## confirmed 1 attribute: X201398_s_at;## still have 126 attributes left.## 174. run of importance source...## 175. run of importance source...## 176. run of importance source...## After 176 iterations, +4.8 mins:## confirmed 1 attribute: X209447_at;## still have 125 attributes left.## 177. run of importance source...## 178. run of importance source...## After 178 iterations, +4.8 mins:## confirmed 2 attributes: X201531_at, X204018_x_at;## still have 123 attributes left.## 179. run of importance source...## 180. run of importance source...## 181. run of importance source...## 182. run of importance source...## 183. run of importance source...## After 183 iterations, +4.8 mins:## confirmed 1 attribute: X220116_at;## still have 122 attributes left.## 184. run of importance source...## 185. run of importance source...## 186. run of importance source...## After 186 iterations, +4.9 mins:## confirmed 1 attribute: X213373_s_at;## still have 121 attributes left.## 187. run of importance source...## 188. run of importance source...## After 188 iterations, +4.9 mins:## confirmed 1 attribute: X201527_at;## still have 120 attributes left.## 189. run of importance source...## 190. run of importance source...## 191. run of importance source...## After 191 iterations, +4.9 mins:## confirmed 1 attribute: X218010_x_at;## still have 119 attributes left.## 192. run of importance source...## 193. run of importance source...## 194. run of importance source...## 195. run of importance source...## After 195 iterations, +4.9 mins:## confirmed 1 attribute: X218320_s_at;## still have 118 attributes left.## 196. run of importance source...## 197. run of importance source...## 198. run of importance source...## After 198 iterations, +4.9 mins:## confirmed 1 attribute: X218189_s_at;## still have 117 attributes left.## 199. run of importance source...b_R = Boruta(y=as.factor(df_R[,2]), x =df_R[,3:ncol(df_R)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## 16. run of importance source...## 17. run of importance source...## 18. run of importance source...## 19. run of importance source...## 20. run of importance source...## 21. run of importance source...## 22. run of importance source...## After 22 iterations, +9.3 mins:## confirmed 4 attributes: X207804_s_at, X210481_s_at, X218002_s_at, X220114_s_at;## rejected 21411 attributes: AFFX.BioB.3_at, AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and 21406 more;## still have 862 attributes left.## 23. run of importance source...## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## After 26 iterations, +9.4 mins:## confirmed 2 attributes: X206380_s_at, X209365_s_at;## rejected 286 attributes: X1431_at, X200027_at, X200037_s_at, X200043_at, X200055_at and 281 more;## still have 574 attributes left.## 27. run of importance source...## 28. run of importance source...## 29. run of importance source...## 30. run of importance source...## After 30 iterations, +9.4 mins:## confirmed 2 attributes: X205019_s_at, X212554_at;## rejected 118 attributes: X1494_f_at, X200708_at, X200735_x_at, X200829_x_at, X200830_at and 113 more;## still have 454 attributes left.## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## 34. run of importance source...## After 34 iterations, +9.4 mins:## confirmed 9 attributes: X200882_s_at, X203554_x_at, X205866_at, X206453_s_at, X206680_at and 4 more;## rejected 47 attributes: X200627_at, X200947_s_at, X200986_at, X201764_at, X202954_at and 42 more;## still have 398 attributes left.## 35. run of importance source...## 36. run of importance source...## 37. run of importance source...## 38. run of importance source...## After 38 iterations, +9.5 mins:## confirmed 3 attributes: X200910_at, X203316_s_at, X220496_at;## rejected 37 attributes: X200652_at, X200788_s_at, X201618_x_at, X202243_s_at, X202475_at and 32 more;## still have 358 attributes left.## 39. run of importance source...## 40. run of importance source...## 41. run of importance source...## After 41 iterations, +9.5 mins:## confirmed 3 attributes: X201453_x_at, X204428_s_at, X205911_at;## rejected 26 attributes: X200064_at, X200661_at, X201472_at, X201731_s_at, X202095_s_at and 21 more;## still have 329 attributes left.## 42. run of importance source...## 43. run of importance source...## 44. run of importance source...## 45. run of importance source...## After 45 iterations, +9.5 mins:## confirmed 3 attributes: X201293_x_at, X212551_at, X216661_x_at;## rejected 18 attributes: X201377_at, X202025_x_at, X202145_at, X202366_at, X202846_s_at and 13 more;## still have 308 attributes left.## 46. run of importance source...## 47. run of importance source...## 48. run of importance source...## After 48 iterations, +9.5 mins:## confirmed 3 attributes: X204641_at, X209219_at, X219787_s_at;## rejected 15 attributes: X201327_s_at, X202824_s_at, X203764_at, X205498_at, X207738_s_at and 10 more;## still have 290 attributes left.## 49. run of importance source...## 50. run of importance source...## 51. run of importance source...## After 51 iterations, +9.6 mins:## confirmed 2 attributes: X205554_s_at, X207828_s_at;## rejected 15 attributes: X200792_at, X202441_at, X202992_at, X203509_at, X207165_at and 10 more;## still have 273 attributes left.## 52. run of importance source...## 53. run of importance source...## 54. run of importance source...## After 54 iterations, +9.6 mins:## confirmed 1 attribute: X201656_at;## rejected 8 attributes: X201555_at, X203270_at, X206305_s_at, X208369_s_at, X211231_x_at and 3 more;## still have 264 attributes left.## 55. run of importance source...## 56. run of importance source...## 57. run of importance source...## After 57 iterations, +9.6 mins:## confirmed 3 attributes: X214421_x_at, X217165_x_at, X217319_x_at;## rejected 10 attributes: X201956_s_at, X202868_s_at, X202882_x_at, X202983_at, X204962_s_at and 5 more;## still have 251 attributes left.## 58. run of importance source...## 59. run of importance source...## 60. run of importance source...## After 60 iterations, +9.6 mins:## confirmed 2 attributes: X212661_x_at, X220017_x_at;## rejected 6 attributes: X200783_s_at, X201890_at, X202503_s_at, X204700_x_at, X210105_s_at and 1 more;## still have 243 attributes left.## 61. run of importance source...## 62. run of importance source...## 63. run of importance source...## After 63 iterations, +9.6 mins:## confirmed 1 attribute: X201128_s_at;## rejected 2 attributes: X209309_at, X218106_s_at;## still have 240 attributes left.## 64. run of importance source...## 65. run of importance source...## 66. run of importance source...## After 66 iterations, +9.7 mins:## confirmed 2 attributes: X211978_x_at, X36829_at;## rejected 10 attributes: X201112_s_at, X204745_x_at, X205773_at, X206629_at, X209066_x_at and 5 more;## still have 228 attributes left.## 67. run of importance source...## 68. run of importance source...## 69. run of importance source...## After 69 iterations, +9.7 mins:## rejected 8 attributes: X200068_s_at, X202647_s_at, X203666_at, X204244_s_at, X206210_s_at and 3 more;## still have 220 attributes left.## 70. run of importance source...## 71. run of importance source...## 72. run of importance source...## After 72 iterations, +9.7 mins:## confirmed 3 attributes: X205890_s_at, X211745_x_at, X212149_at;## rejected 4 attributes: X200052_s_at, X208869_s_at, X209711_at, X213661_at;## still have 213 attributes left.## 73. run of importance source...## 74. run of importance source...## 75. run of importance source...## After 75 iterations, +9.7 mins:## rejected 3 attributes: X201714_at, X208581_x_at, X209687_at;## still have 210 attributes left.## 76. run of importance source...## 77. run of importance source...## After 77 iterations, +9.7 mins:## confirmed 5 attributes: X207076_s_at, X208147_s_at, X209458_x_at, X213629_x_at, X216025_x_at;## rejected 3 attributes: X201771_at, X212185_x_at, X217918_at;## still have 202 attributes left.## 78. run of importance source...## 79. run of importance source...## 80. run of importance source...## After 80 iterations, +9.7 mins:## confirmed 1 attribute: X206643_at;## rejected 3 attributes: X212832_s_at, X213404_s_at, X214274_s_at;## still have 198 attributes left.## 81. run of importance source...## 82. run of importance source...## 83. run of importance source...## After 83 iterations, +9.8 mins:## confirmed 1 attribute: X200734_s_at;## rejected 2 attributes: X202276_at, X209714_s_at;## still have 195 attributes left.## 84. run of importance source...## 85. run of importance source...## 86. run of importance source...## After 86 iterations, +9.8 mins:## confirmed 3 attributes: X202737_s_at, X202861_at, X217521_at;## rejected 3 attributes: X201291_s_at, X214906_x_at, X219543_at;## still have 189 attributes left.## 87. run of importance source...## 88. run of importance source...## 89. run of importance source...## After 89 iterations, +9.8 mins:## confirmed 1 attribute: X201577_at;## rejected 3 attributes: X203358_s_at, X209470_s_at, X218541_s_at;## still have 185 attributes left.## 90. run of importance source...## 91. run of importance source...## After 91 iterations, +9.8 mins:## confirmed 5 attributes: X204301_at, X205440_s_at, X209189_at, X213068_at, X220491_at;## rejected 1 attribute: X207584_at;## still have 179 attributes left.## 92. run of importance source...## 93. run of importance source...## 94. run of importance source...## After 94 iterations, +9.8 mins:## confirmed 1 attribute: X202541_at;## still have 178 attributes left.## 95. run of importance source...## 96. run of importance source...## 97. run of importance source...## After 97 iterations, +9.8 mins:## confirmed 2 attributes: X205531_s_at, X208079_s_at;## still have 176 attributes left.## 98. run of importance source...## 99. run of importance source...## After 99 iterations, +9.9 mins:## confirmed 1 attribute: X222139_at;## still have 175 attributes left.## 100. run of importance source...## 101. run of importance source...## 102. run of importance source...## After 102 iterations, +9.9 mins:## confirmed 3 attributes: X215768_at, X217414_x_at, X220116_at;## rejected 1 attribute: X204023_at;## still have 171 attributes left.## 103. run of importance source...## 104. run of importance source...## 105. run of importance source...## After 105 iterations, +9.9 mins:## rejected 1 attribute: X202184_s_at;## still have 170 attributes left.## 106. run of importance source...## 107. run of importance source...## After 107 iterations, +9.9 mins:## confirmed 2 attributes: X202963_at, X211628_x_at;## still have 168 attributes left.## 108. run of importance source...## 109. run of importance source...## 110. run of importance source...## After 110 iterations, +9.9 mins:## confirmed 1 attribute: X209447_at;## rejected 2 attributes: X201252_at, X201425_at;## still have 165 attributes left.## 111. run of importance source...## 112. run of importance source...## 113. run of importance source...## After 113 iterations, +9.9 mins:## confirmed 2 attributes: X205392_s_at, X207262_at;## still have 163 attributes left.## 114. run of importance source...## 115. run of importance source...## After 115 iterations, +9.9 mins:## confirmed 2 attributes: X200954_at, X220647_s_at;## rejected 1 attribute: X201587_s_at;## still have 160 attributes left.## 116. run of importance source...## 117. run of importance source...## 118. run of importance source...## After 118 iterations, +10 mins:## confirmed 2 attributes: X201584_s_at, X215330_at;## still have 158 attributes left.## 119. run of importance source...## 120. run of importance source...## After 120 iterations, +10 mins:## confirmed 1 attribute: X205858_at;## still have 157 attributes left.## 121. run of importance source...## 122. run of importance source...## 123. run of importance source...## After 123 iterations, +10 mins:## confirmed 2 attributes: X204977_at, X207218_at;## still have 155 attributes left.## 124. run of importance source...## 125. run of importance source...## 126. run of importance source...## After 126 iterations, +10 mins:## confirmed 1 attribute: X211699_x_at;## rejected 3 attributes: X209044_x_at, X210460_s_at, X221923_s_at;## still have 151 attributes left.## 127. run of importance source...## 128. run of importance source...## After 128 iterations, +10 mins:## rejected 2 attributes: X205022_s_at, X214180_at;## still have 149 attributes left.## 129. run of importance source...## 130. run of importance source...## 131. run of importance source...## After 131 iterations, +10 mins:## confirmed 2 attributes: X209821_at, X214414_x_at;## still have 147 attributes left.## 132. run of importance source...## 133. run of importance source...## After 133 iterations, +10 mins:## confirmed 2 attributes: X204018_x_at, X214710_s_at;## still have 145 attributes left.## 134. run of importance source...## 135. run of importance source...## 136. run of importance source...## After 136 iterations, +10 mins:## rejected 1 attribute: X222077_s_at;## still have 144 attributes left.## 137. run of importance source...## 138. run of importance source...## After 138 iterations, +10 mins:## confirmed 1 attribute: X200606_at;## still have 143 attributes left.## 139. run of importance source...## 140. run of importance source...## 141. run of importance source...## 142. run of importance source...## 143. run of importance source...## After 143 iterations, +10 mins:## confirmed 1 attribute: X201398_s_at;## still have 142 attributes left.## 144. run of importance source...## 145. run of importance source...## 146. run of importance source...## 147. run of importance source...## 148. run of importance source...## 149. run of importance source...## 150. run of importance source...## 151. run of importance source...## 152. run of importance source...## 153. run of importance source...## 154. run of importance source...## 155. run of importance source...## 156. run of importance source...## After 156 iterations, +10 mins:## confirmed 2 attributes: X201531_at, X213373_s_at;## still have 140 attributes left.## 157. run of importance source...## 158. run of importance source...## 159. run of importance source...## 160. run of importance source...## 161. run of importance source...## After 161 iterations, +10 mins:## rejected 1 attribute: X208822_s_at;## still have 139 attributes left.## 162. run of importance source...## 163. run of importance source...## 164. run of importance source...## 165. run of importance source...## 166. run of importance source...## After 166 iterations, +10 mins:## confirmed 2 attributes: X205086_s_at, X205819_at;## still have 137 attributes left.## 167. run of importance source...## 168. run of importance source...## After 168 iterations, +10 mins:## rejected 1 attribute: X206461_x_at;## still have 136 attributes left.## 169. run of importance source...## 170. run of importance source...## 171. run of importance source...## After 171 iterations, +10 mins:## confirmed 2 attributes: X209825_s_at, X219485_s_at;## still have 134 attributes left.## 172. run of importance source...## 173. run of importance source...## After 173 iterations, +10 mins:## confirmed 2 attributes: X209614_at, X218320_s_at;## still have 132 attributes left.## 174. run of importance source...## 175. run of importance source...## 176. run of importance source...## 177. run of importance source...## 178. run of importance source...## 179. run of importance source...## 180. run of importance source...## 181. run of importance source...## After 181 iterations, +10 mins:## rejected 1 attribute: X201268_at;## still have 131 attributes left.## 182. run of importance source...## 183. run of importance source...## After 183 iterations, +10 mins:## rejected 1 attribute: X218921_at;## still have 130 attributes left.## 184. run of importance source...## 185. run of importance source...## 186. run of importance source...## After 186 iterations, +10 mins:## confirmed 2 attributes: X206606_at, X217751_at;## still have 128 attributes left.## 187. run of importance source...## 188. run of importance source...## 189. run of importance source...## 190. run of importance source...## 191. run of importance source...## 192. run of importance source...## 193. run of importance source...## After 193 iterations, +10 mins:## confirmed 1 attribute: X211762_s_at;## still have 127 attributes left.## 194. run of importance source...## 195. run of importance source...## 196. run of importance source...## 197. run of importance source...## 198. run of importance source...## After 198 iterations, +11 mins:## confirmed 1 attribute: X201088_at;## still have 126 attributes left.## 199. run of importance source...print(b_S)## Boruta performed 199 iterations in 4.993534 mins.
## 100 attributes confirmed important: X200606_at, X200734_s_at,
## X200882_s_at, X200910_at, X201088_at and 95 more;
## 22073 attributes confirmed unimportant: AFFX.BioB.3_at,
## AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and
## 22068 more;
## 104 tentative attributes left: X200014_s_at, X200021_at, X200711_s_at,
## X200826_at, X200843_s_at and 99 more;print(b_R)## Boruta performed 199 iterations in 10.5144 mins.
## 97 attributes confirmed important: X200606_at, X200734_s_at,
## X200882_s_at, X200910_at, X200954_at and 92 more;
## 22054 attributes confirmed unimportant: AFFX.BioB.3_at,
## AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and
## 22049 more;
## 126 tentative attributes left: X200014_s_at, X200021_at, X200062_s_at,
## X200609_s_at, X200826_at and 121 more;print(b_M)## Boruta performed 199 iterations in 4.940045 mins.
## 86 attributes confirmed important: X200734_s_at, X200882_s_at,
## X200910_at, X201128_s_at, X201293_x_at and 81 more;
## 22074 attributes confirmed unimportant: AFFX.BioB.3_at,
## AFFX.BioB.5_at, AFFX.BioB.M_at, AFFX.BioC.3_at, AFFX.BioC.5_at and
## 22069 more;
## 117 tentative attributes left: X200014_s_at, X200021_at, X200606_at,
## X200711_s_at, X200843_s_at and 112 more;A function will be created to assess commonality between the results of running Boruta (for the same number of runs) on the different normalized versions of the dataset.
#Takes as arguments the selected genes vectors of 2 Boruta runs
common_genes <- function(d1,d2) { #return the fraction of the genes selected as important 2 distinct Boruta runs / max of d1 and d2
c = 0
v=c()
for (i in d1){
for(j in d2){
if(i==j){
c=c+1
break
}
}
if(j==d2[length(d2)]){ #extract the genes that are not common
v=cbind(v,i[1])
}
}
return (list((c/min(length(d1),length(d2))),as.list(v)))
}common_genes(getSelectedAttributes(b_S),getSelectedAttributes(b_M))[1]## [[1]]
## [1] 0.9767442common_genes(getSelectedAttributes(b_S),getSelectedAttributes(b_R))[1]## [[1]]
## [1] 0.9175258common_genes(getSelectedAttributes(b_R),getSelectedAttributes(b_M))[1]## [[1]]
## [1] 0.9651163common_genes(getSelectedAttributes(boruta),getSelectedAttributes(b_R))[1]## [[1]]
## [1] 0.9072165common_genes(getSelectedAttributes(boruta),getSelectedAttributes(b_M))[1]## [[1]]
## [1] 0.9418605common_genes(getSelectedAttributes(boruta),getSelectedAttributes(b_S))[1]## [[1]]
## [1] 0.93It can be seen that the selected genes did not differ much between the differently normalized datasets, nor between them and the original dataset, suggesting that Boruta is likely not to be affected by the different scales of the different features, unlike many other approaches like PCA.
(1.2.2) Assessing variance-based gene selection approaches
The mutated dataset of phase II (selecting the 27 genes with highest variance) will be created again.
mut_df=df[1:2]
current=3
for (i in 3:ncol(df)){
if(var(df[i])>6){
mut_df=cbind(mut_df,df[,i])
colnames(mut_df)[current]=colnames(df[i])
current=current+1
}
}
ncol(mut_df)## [1] 29boruta3 <- Boruta(y=as.factor(mut_df[,2]), x =mut_df[,3:ncol(mut_df)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## After 12 iterations, +2.1 secs:## confirmed 24 attributes: X1431_at, X1494_f_at, X202409_at, X204351_at, X205695_at and 19 more;## rejected 2 attributes: AFFX.HUMRGE.M10098_5_at, X209560_s_at;## still have 1 attribute left.## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## 16. run of importance source...## 17. run of importance source...## 18. run of importance source...## 19. run of importance source...## 20. run of importance source...## 21. run of importance source...## 22. run of importance source...## 23. run of importance source...## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## 27. run of importance source...## 28. run of importance source...## 29. run of importance source...## 30. run of importance source...## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## 34. run of importance source...## 35. run of importance source...## 36. run of importance source...## 37. run of importance source...## 38. run of importance source...## 39. run of importance source...## 40. run of importance source...## 41. run of importance source...## 42. run of importance source...## 43. run of importance source...## 44. run of importance source...## 45. run of importance source...## 46. run of importance source...## 47. run of importance source...## 48. run of importance source...## 49. run of importance source...## 50. run of importance source...## 51. run of importance source...## 52. run of importance source...## 53. run of importance source...## 54. run of importance source...## 55. run of importance source...## 56. run of importance source...## 57. run of importance source...## 58. run of importance source...## 59. run of importance source...## 60. run of importance source...## 61. run of importance source...## 62. run of importance source...## 63. run of importance source...## 64. run of importance source...## 65. run of importance source...## 66. run of importance source...## 67. run of importance source...## 68. run of importance source...## 69. run of importance source...## 70. run of importance source...## 71. run of importance source...## 72. run of importance source...## 73. run of importance source...## 74. run of importance source...## 75. run of importance source...## 76. run of importance source...## 77. run of importance source...## 78. run of importance source...## 79. run of importance source...## 80. run of importance source...## 81. run of importance source...## 82. run of importance source...## 83. run of importance source...## 84. run of importance source...## 85. run of importance source...## 86. run of importance source...## 87. run of importance source...## 88. run of importance source...## 89. run of importance source...## 90. run of importance source...## 91. run of importance source...## 92. run of importance source...## 93. run of importance source...## 94. run of importance source...## 95. run of importance source...## 96. run of importance source...## 97. run of importance source...## 98. run of importance source...## 99. run of importance source...## 100. run of importance source...## 101. run of importance source...## 102. run of importance source...## 103. run of importance source...## 104. run of importance source...## 105. run of importance source...## 106. run of importance source...## 107. run of importance source...## 108. run of importance source...## 109. run of importance source...## 110. run of importance source...## 111. run of importance source...## 112. run of importance source...## 113. run of importance source...## 114. run of importance source...## 115. run of importance source...## 116. run of importance source...## 117. run of importance source...## 118. run of importance source...## 119. run of importance source...## 120. run of importance source...## 121. run of importance source...## 122. run of importance source...## 123. run of importance source...## 124. run of importance source...## 125. run of importance source...## 126. run of importance source...## 127. run of importance source...## 128. run of importance source...## 129. run of importance source...## 130. run of importance source...## 131. run of importance source...## 132. run of importance source...## 133. run of importance source...## 134. run of importance source...## 135. run of importance source...## 136. run of importance source...## 137. run of importance source...## 138. run of importance source...## 139. run of importance source...## 140. run of importance source...## 141. run of importance source...## 142. run of importance source...## 143. run of importance source...## 144. run of importance source...## 145. run of importance source...## 146. run of importance source...## 147. run of importance source...## 148. run of importance source...## 149. run of importance source...## 150. run of importance source...## 151. run of importance source...## 152. run of importance source...## 153. run of importance source...## 154. run of importance source...## 155. run of importance source...## 156. run of importance source...## 157. run of importance source...## 158. run of importance source...## 159. run of importance source...## 160. run of importance source...## 161. run of importance source...## 162. run of importance source...## 163. run of importance source...## 164. run of importance source...## 165. run of importance source...## 166. run of importance source...## 167. run of importance source...## 168. run of importance source...## 169. run of importance source...## 170. run of importance source...## 171. run of importance source...## 172. run of importance source...## 173. run of importance source...## 174. run of importance source...## 175. run of importance source...## 176. run of importance source...## 177. run of importance source...## 178. run of importance source...## 179. run of importance source...## 180. run of importance source...## 181. run of importance source...## 182. run of importance source...## 183. run of importance source...## 184. run of importance source...## 185. run of importance source...## 186. run of importance source...## 187. run of importance source...## 188. run of importance source...## 189. run of importance source...## 190. run of importance source...## 191. run of importance source...## 192. run of importance source...## 193. run of importance source...## 194. run of importance source...## 195. run of importance source...## 196. run of importance source...## 197. run of importance source...## 198. run of importance source...## 199. run of importance source...print(boruta3)## Boruta performed 199 iterations in 46.9231 secs.
## 24 attributes confirmed important: X1431_at, X1494_f_at, X202409_at,
## X204351_at, X205695_at and 19 more;
## 2 attributes confirmed unimportant: AFFX.HUMRGE.M10098_5_at,
## X209560_s_at;
## 1 tentative attributes left: X204694_at;plot(boruta3,las=2,cex.axis=0.7)
The results of running Boruta on this mutated dataset shows that almost all of its genes are important. Yet, it is important to note here that, unlike the case of running boruta on new_df (containing all the important features selected after 200 runs) where the original importance scale was conserved, the importance scale here changed and thus the important features selected for mut_df might not be actually important.
Running common_genes between boruta3 (for mut_df) and boruta (for original df) and boruta2 (for new_df with only the important genes), reflects this point. Only a ratio of 0.125 of the genes classified (acounting for 3 genes) as important by Boruta are among the 27 genes with highest variance.
common_genes(getSelectedAttributes(boruta), getSelectedAttributes(boruta3))[1]## [[1]]
## [1] 0.125common_genes(getSelectedAttributes(boruta2), getSelectedAttributes(boruta3))[1]## [[1]]
## [1] 0.125Next, more control over the selection will be allowed by selecting the genes with highest highest overall variance and lowest variance across normal cases, in an attempt to get a better seperation using such genes.
var=var1=var2=c(0,0)
for(i in 3:ncol(df)){
var[i] = var(df[,i]) #overall variance
var1[i] = var(df[1:181,i]) #variance over HCC cases
var2[i] = var(df[182:357,i]) #variance over normal patients
}mut_df=df[1:2]
current=3
for (i in 3:ncol(df)){
if(var[i]>5.2 & var2[i]<1){
mut_df=cbind(mut_df,df[,i])
colnames(mut_df)[current]=colnames(df[i])
current=current+1
}
}
ncol(mut_df)## [1] 26boruta3 <- Boruta(y=as.factor(mut_df[,2]), x =mut_df[,3:ncol(mut_df)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## After 12 iterations, +5.4 secs:## confirmed 24 attributes: X1431_at, X1494_f_at, X202409_at, X202410_x_at, X205404_at and 19 more;## no more attributes left.print(boruta3)## Boruta performed 12 iterations in 5.404869 secs.
## 24 attributes confirmed important: X1431_at, X1494_f_at, X202409_at,
## X202410_x_at, X205404_at and 19 more;
## No attributes deemed unimportant.It can be seen that the ratio further decreased reflecting that this approach for selection is even less efficient.
common_genes(getSelectedAttributes(boruta3),getSelectedAttributes(boruta))[1]## [[1]]
## [1] 0.08333333Next, genes will be selected using the standardized dataset, where the genes with lowest variance across normal cases will be selected, which was expected in phase II to “offer the selection approach with the best control over the independent variability of the selected genes over the normal and HCC cases”.
var=var1=var2=c(0,0)
for(i in 3:ncol(df_S)){
var[i] = var(df_S[,i]) #overall variance
var1[i] = var(df_S[1:181,i]) #variance over HCC cases
var2[i] = var(df_S[182:357,i]) #variance over normal patients
}mut_df2=df[1:2]
current=3
for (i in 3:ncol(df)){
if(var1[i]<0.25){
mut_df2=cbind(mut_df2,df_S[,i])
colnames(mut_df2)[current]=colnames(df[i])
current=current+1
}
}
ncol(mut_df2)## [1] 24boruta4 <- Boruta(y=as.factor(mut_df2[,2]), x =mut_df2[,3:ncol(mut_df2)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## After 12 iterations, +3.5 secs:## confirmed 20 attributes: X205019_s_at, X205819_at, X205911_at, X206380_s_at, X207420_at and 15 more;## still have 2 attributes left.## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## 16. run of importance source...## 17. run of importance source...## 18. run of importance source...## 19. run of importance source...## 20. run of importance source...## 21. run of importance source...## 22. run of importance source...## After 22 iterations, +5.6 secs:## confirmed 1 attribute: X205984_at;## still have 1 attribute left.## 23. run of importance source...## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## 27. run of importance source...## 28. run of importance source...## 29. run of importance source...## 30. run of importance source...## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## 34. run of importance source...## After 34 iterations, +8.3 secs:## confirmed 1 attribute: X206210_s_at;## no more attributes left.print(boruta4)## Boruta performed 34 iterations in 8.311142 secs.
## 22 attributes confirmed important: X205019_s_at, X205819_at,
## X205911_at, X205984_at, X206210_s_at and 17 more;
## No attributes deemed unimportant.This selection approach resulted in above half of the selected genes being important, much better than the approaches considered before. An interesting observation is that no genes are shared by this selection approach and the one selecting for highest variance.
common_genes(getSelectedAttributes(boruta4),getSelectedAttributes(boruta))[1]## [[1]]
## [1] 0.5454545common_genes(getSelectedAttributes(boruta4),getSelectedAttributes(boruta3))[1]## [[1]]
## [1] 0Next, the dataset normalized using min-max will be considered.
var=var1=var2=c(0,0)
for(i in 3:ncol(df)){
var[i] = var(df_M[,i]) #overall variance
var1[i] = var(df_M[1:181,i]) #variance over HCC cases
var2[i] = var(df_M[182:357,i]) #variance over normal patients
}mut_df_M=df[1:2]
current=3
v2 =c()
for (i in 3:ncol(df)){
if(var[i]>0.09){
mut_df_M=cbind(mut_df_M,df_M[,i])
colnames(mut_df_M)[current]=colnames(df[i])
v2=cbind(v2,colnames(df_M[i]))
current=current+1
}
}
ncol(mut_df_M)## [1] 25boruta5 <- Boruta(y=as.factor(mut_df_M[,2]), x =mut_df_M[,3:ncol(mut_df_M)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## After 12 iterations, +2.2 secs:## confirmed 20 attributes: X1494_f_at, X205019_s_at, X205531_s_at, X206354_at, X206561_s_at and 15 more;## still have 3 attributes left.## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## 16. run of importance source...## After 16 iterations, +3 secs:## confirmed 2 attributes: X206239_s_at, X212094_at;## rejected 1 attribute: X214218_s_at;## no more attributes left.print(boruta5)## Boruta performed 16 iterations in 2.984826 secs.
## 22 attributes confirmed important: X1494_f_at, X205019_s_at,
## X205531_s_at, X206239_s_at, X206354_at and 17 more;
## 1 attributes confirmed unimportant: X214218_s_at;This approach is shown to be less efficient than the one using the standardized dataset, and it can also be notices that unlike the last approach displaying 0 common genes with the highest variance approach, 60% of the genes selected by this approach are among the highest variance genes.
common_genes(getSelectedAttributes(boruta5),getSelectedAttributes(boruta))[1]## [[1]]
## [1] 0.2727273common_genes(getSelectedAttributes(boruta3),getSelectedAttributes(boruta5))[1]## [[1]]
## [1] 0.2727273More control will be allowed over this selection as was done before by selecting the genes with highest overall variance et lowest variance across normal cases in the min-max dataset.
mut_df_M=df[1:2]
current=3
v2 =c()
for (i in 3:ncol(df)){
if(var[i]>0.08 & var2[i]<0.02){
mut_df_M=cbind(mut_df_M,df_M[,i])
colnames(mut_df_M)[current]=colnames(df[i])
v2=cbind(v2,colnames(df_M[i]))
current=current+1
}
}
ncol(mut_df_M)## [1] 32boruta5 <- Boruta(y=as.factor(mut_df_M[,2]), x =mut_df_M[,3:ncol(mut_df_M)], doTrace = 2, maxRuns = 200)## 1. run of importance source...## 2. run of importance source...## 3. run of importance source...## 4. run of importance source...## 5. run of importance source...## 6. run of importance source...## 7. run of importance source...## 8. run of importance source...## 9. run of importance source...## 10. run of importance source...## 11. run of importance source...## 12. run of importance source...## After 12 iterations, +3 secs:## confirmed 23 attributes: X1494_f_at, X201890_at, X202422_s_at, X204428_s_at, X205019_s_at and 18 more;## still have 7 attributes left.## 13. run of importance source...## 14. run of importance source...## 15. run of importance source...## 16. run of importance source...## After 16 iterations, +3.7 secs:## confirmed 3 attributes: X210328_at, X211295_x_at, X214621_at;## still have 4 attributes left.## 17. run of importance source...## 18. run of importance source...## 19. run of importance source...## 20. run of importance source...## 21. run of importance source...## 22. run of importance source...## 23. run of importance source...## After 23 iterations, +5.2 secs:## rejected 1 attribute: X89977_at;## still have 3 attributes left.## 24. run of importance source...## 25. run of importance source...## 26. run of importance source...## 27. run of importance source...## 28. run of importance source...## 29. run of importance source...## 30. run of importance source...## 31. run of importance source...## 32. run of importance source...## 33. run of importance source...## 34. run of importance source...## 35. run of importance source...## 36. run of importance source...## 37. run of importance source...## 38. run of importance source...## 39. run of importance source...## 40. run of importance source...## 41. run of importance source...## 42. run of importance source...## 43. run of importance source...## 44. run of importance source...## 45. run of importance source...## 46. run of importance source...## 47. run of importance source...## 48. run of importance source...## 49. run of importance source...## 50. run of importance source...## 51. run of importance source...## After 51 iterations, +11 secs:## rejected 1 attribute: X206930_at;## still have 2 attributes left.## 52. run of importance source...## 53. run of importance source...## 54. run of importance source...## 55. run of importance source...## 56. run of importance source...## 57. run of importance source...## 58. run of importance source...## 59. run of importance source...## After 59 iterations, +13 secs:## confirmed 1 attribute: X207201_s_at;## still have 1 attribute left.## 60. run of importance source...## 61. run of importance source...## 62. run of importance source...## 63. run of importance source...## 64. run of importance source...## 65. run of importance source...## 66. run of importance source...## 67. run of importance source...## 68. run of importance source...## 69. run of importance source...## 70. run of importance source...## 71. run of importance source...## 72. run of importance source...## 73. run of importance source...## 74. run of importance source...## 75. run of importance source...## 76. run of importance source...## 77. run of importance source...## 78. run of importance source...## 79. run of importance source...## 80. run of importance source...## 81. run of importance source...## 82. run of importance source...## 83. run of importance source...## 84. run of importance source...## 85. run of importance source...## 86. run of importance source...## 87. run of importance source...## 88. run of importance source...## 89. run of importance source...## 90. run of importance source...## 91. run of importance source...## 92. run of importance source...## 93. run of importance source...## 94. run of importance source...## 95. run of importance source...## 96. run of importance source...## 97. run of importance source...## 98. run of importance source...## 99. run of importance source...## 100. run of importance source...## 101. run of importance source...## 102. run of importance source...## 103. run of importance source...## 104. run of importance source...## 105. run of importance source...## 106. run of importance source...## 107. run of importance source...## 108. run of importance source...## 109. run of importance source...## 110. run of importance source...## 111. run of importance source...## 112. run of importance source...## 113. run of importance source...## 114. run of importance source...## 115. run of importance source...## 116. run of importance source...## 117. run of importance source...## 118. run of importance source...## 119. run of importance source...## 120. run of importance source...## 121. run of importance source...## 122. run of importance source...## 123. run of importance source...## 124. run of importance source...## 125. run of importance source...## 126. run of importance source...## 127. run of importance source...## 128. run of importance source...## 129. run of importance source...## 130. run of importance source...## 131. run of importance source...## 132. run of importance source...## 133. run of importance source...## 134. run of importance source...## 135. run of importance source...## 136. run of importance source...## 137. run of importance source...## 138. run of importance source...## 139. run of importance source...## 140. run of importance source...## 141. run of importance source...## 142. run of importance source...## 143. run of importance source...## 144. run of importance source...## 145. run of importance source...## 146. run of importance source...## 147. run of importance source...## 148. run of importance source...## 149. run of importance source...## 150. run of importance source...## 151. run of importance source...## 152. run of importance source...## 153. run of importance source...## 154. run of importance source...## 155. run of importance source...## 156. run of importance source...## 157. run of importance source...## 158. run of importance source...## 159. run of importance source...## 160. run of importance source...## 161. run of importance source...## 162. run of importance source...## 163. run of importance source...## 164. run of importance source...## 165. run of importance source...## 166. run of importance source...## 167. run of importance source...## 168. run of importance source...## 169. run of importance source...## 170. run of importance source...## 171. run of importance source...## 172. run of importance source...## 173. run of importance source...## 174. run of importance source...## 175. run of importance source...## 176. run of importance source...## 177. run of importance source...## 178. run of importance source...## 179. run of importance source...## After 179 iterations, +38 secs:## confirmed 1 attribute: X212094_at;## no more attributes left.print(boruta5)## Boruta performed 179 iterations in 37.82671 secs.
## 28 attributes confirmed important: X1494_f_at, X201890_at,
## X202422_s_at, X204428_s_at, X205019_s_at and 23 more;
## 2 attributes confirmed unimportant: X206930_at, X89977_at;This is shown to further decrease the commonality ratio (despite it selecting for more genes).
common_genes(getSelectedAttributes(boruta5),getSelectedAttributes(boruta))[1]## [[1]]
## [1] 0.1785714common_genes(getSelectedAttributes(boruta3),getSelectedAttributes(boruta5))[1]## [[1]]
## [1] 0.3333333Generally, it was shown that the highest-variance selection approach was not efficient using the original dataset, with a potential to increase its efficiency significantly using normalized versions of the dataset. The best variance-based selection approach was shown to be the one using the standardized dataset and selecting for the genes with lowest variance across the normal cases. Only in this case where the overall variance will be 1 was it shown to be efficient to consider the variability across 1 class alone, yet in the case of other normalization techniques and the original dataset such consideration was shown to further decrease the efficiency of the selection approach.
- Tree-based approaches
(2.1) Random Forest / Bagging
random = randomForest(type~.,data=new_df,mtry = sqrt(ncol(new_df)-1), importance = T, ntree = 1000)
bagging = randomForest(type~.,data=new_df,mtry=ncol(new_df)-1,importance=T,ntree=1000)
plot(random)
plot(bagging)
A clearer representation of the results for the bagging and random forest models will be used.
oob.err.data <- data.frame(
Trees = rep(1:nrow(bagging$err.rate), 3),
Type = rep(c("OOB","normal","HCC"), each = nrow(bagging$err.rate)),
Error = c(bagging$err.rate[,"OOB"], bagging$err.rate[,"normal"], bagging$err.rate[,"HCC"]))
ggplot(data = oob.err.data, aes(x = Trees, y= Error)) + geom_line(aes(color = Type))
print(bagging)##
## Call:
## randomForest(formula = type ~ ., data = new_df, mtry = ncol(new_df) - 1, importance = T, ntree = 1000)
## Type of random forest: classification
## Number of trees: 1000
## No. of variables tried at each split: 107
##
## OOB estimate of error rate: 3.64%
## Confusion matrix:
## HCC normal class.error
## HCC 174 7 0.03867403
## normal 6 170 0.03409091oob.err.data <- data.frame(
Trees = rep(1:nrow(random$err.rate), 3),
Type = rep(c("OOB","normal","HCC"), each = nrow(random$err.rate)),
Error = c(random$err.rate[,"OOB"], random$err.rate[,"normal"], random$err.rate[,"HCC"]))
ggplot(data = oob.err.data, aes(x = Trees, y= Error)) + geom_line(aes(color = Type))
print(random)##
## Call:
## randomForest(formula = type ~ ., data = new_df, mtry = sqrt(ncol(new_df) - 1), importance = T, ntree = 1000)
## Type of random forest: classification
## Number of trees: 1000
## No. of variables tried at each split: 10
##
## OOB estimate of error rate: 2.8%
## Confusion matrix:
## HCC normal class.error
## HCC 175 6 0.03314917
## normal 4 172 0.02272727It can be seen that using the random forest approach will give slightly better results than bagging. Using the tuneRF function to find the mtry parameter choices leading to the lowest OOB errors reflect the fact that many mtry choice below 9 (the sqrt of ncol(new_df)) can lead to the same error as the random forest model already used, yet despite repeating tuneRF many times, it rarely shows a model resulting in a lower error rate. So it does not seem that a better model can be reached using different parameters.
The model chosen by tuneRF is also presentated by turning doBest=TRUE, yet it can be noticed that this model will be highly variable.
t <- tuneRF(new_df[,-1], new_df[,1],
stepFactor = 0.5,
mtryStart=2,
plot = TRUE,
ntreeTry = 50,
trace = TRUE,
improve = 1e-5,doBest=TRUE)## mtry = 2 OOB error = 3.64%
## Searching left ...
## mtry = 4 OOB error = 2.52%
## 0.3076923 1e-05
## mtry = 8 OOB error = 2.52%
## 0 1e-05
## Searching right ...
## mtry = 1 OOB error = 2.8%
## -0.1111111 1e-05
oob.err.data <- data.frame(
Trees = rep(1:nrow(t$err.rate), 3),
Type = rep(c("OOB","normal","HCC"), each = nrow(t$err.rate)),
Error = c(t$err.rate[,"OOB"], t$err.rate[,"normal"], t$err.rate[,"HCC"]))
ggplot(data = oob.err.data, aes(x = Trees, y= Error)) + geom_line(aes(color = Type))
print(t)##
## Call:
## randomForest(x = x, y = y, mtry = res[which.min(res[, 2]), 1])
## Type of random forest: classification
## Number of trees: 500
## No. of variables tried at each split: 4
##
## OOB estimate of error rate: 3.08%
## Confusion matrix:
## HCC normal class.error
## HCC 175 6 0.03314917
## normal 5 171 0.02840909Most trees used are shown to be only in the order of around 9 nodes.
hist(treesize(t),
main = "No. of Nodes for the Trees",
col = "green")
Here the results of boruta are replicated. The importance values for
each of the selected genes (using the Mean Decrease Accuracy parameter)
can be investigated.
varImpPlot(t,sort = T,n.var = 10,main = "Top 10 - Variable Importance")
importance(t)## MeanDecreaseGini
## X200606_at 0.2733918
## X200734_s_at 0.3504621
## X200882_s_at 1.8330786
## X200910_at 4.4862589
## X200954_at 0.1589631
## X201128_s_at 0.3120670
## X201184_s_at 0.1149233
## X201293_x_at 1.7175276
## X201398_s_at 0.4973706
## X201441_at 0.2882500
## X201453_x_at 1.0111716
## X201516_at 0.3006778
## X201527_at 0.6313340
## X201531_at 0.5521184
## X201577_at 1.8913484
## X201584_s_at 0.6279321
## X201656_at 2.6143492
## X202541_at 0.4025074
## X202737_s_at 0.4017331
## X202861_at 1.4727012
## X202940_at 0.2429080
## X202963_at 0.7611297
## X203316_s_at 3.7924107
## X203554_x_at 5.8216589
## X203755_at 1.3941948
## X204018_x_at 0.3614278
## X204301_at 0.3768668
## X204428_s_at 4.8883800
## X204641_at 2.9687203
## X204977_at 0.5707512
## X205019_s_at 5.4157636
## X205086_s_at 0.3743967
## X205298_s_at 0.2104409
## X205306_x_at 0.3780037
## X205392_s_at 0.3009806
## X205440_s_at 1.4512671
## X205531_s_at 0.9356546
## X205554_s_at 2.1138807
## X205740_s_at 0.2418867
## X205819_at 1.0965278
## X205858_at 0.5693858
## X205866_at 3.3394776
## X205890_s_at 0.4159977
## X205911_at 2.6923547
## X206380_s_at 4.4304231
## X206453_s_at 2.8498438
## X206643_at 0.3830777
## X206680_at 1.2623682
## X207076_s_at 3.1372194
## X207218_at 0.6672391
## X207262_at 1.4830196
## X207330_at 0.2862397
## X207609_s_at 4.5760741
## X207804_s_at 4.7617762
## X207828_s_at 1.8239096
## X207995_s_at 2.1486914
## X208079_s_at 1.4696512
## X208147_s_at 1.3303033
## X208816_x_at 0.1469227
## X209189_at 0.9998378
## X209219_at 3.5711276
## X209335_at 0.4603534
## X209365_s_at 5.6540940
## X209447_at 0.5593249
## X209458_x_at 0.2498461
## X209821_at 0.1801749
## X209825_s_at 1.9001001
## X210095_s_at 1.0605651
## X210481_s_at 5.0036921
## X210909_x_at 0.5087575
## X211023_at 0.2381026
## X211378_x_at 2.2866758
## X211628_x_at 0.2720844
## X211699_x_at 0.4625148
## X211745_x_at 0.4462421
## X211765_x_at 2.2791663
## X211978_x_at 1.8580728
## X212149_at 0.4326196
## X212551_at 1.5766499
## X212554_at 1.1024624
## X212661_x_at 3.5306646
## X213068_at 0.1875794
## X213629_x_at 3.2664847
## X214414_x_at 0.3212992
## X214421_x_at 1.1876550
## X214710_s_at 3.2235809
## X215138_s_at 0.1879010
## X215330_at 0.3086610
## X215768_at 0.4752006
## X216025_x_at 3.7808133
## X216661_x_at 3.1063103
## X216782_at 0.2273709
## X217165_x_at 4.0914072
## X217319_x_at 2.1676903
## X217414_x_at 0.4679428
## X217521_at 0.3676792
## X218002_s_at 3.1463571
## X218061_at 3.2824211
## X219485_s_at 1.0917931
## X219787_s_at 4.1140353
## X220017_x_at 2.0400429
## X220114_s_at 5.2014166
## X220116_at 0.3490405
## X220148_at 1.8098774
## X220491_at 1.7143636
## X220496_at 3.5395761
## X36829_at 2.2752322The partial plot is used to give a graphical depiction of the effect of different variables on the each category classification. It can be seen that for the same gene, its effect on HCC classification is the same for normal classification but reversed. These plots confirm the observation of before that this selection approach will combine genes contributing differently to the classification task, and complementing each others patterns of separation to reach the optimal results. The plots are shown for 2 genes with 10 times discrepancy in their importance scores.
partialPlot(t, new_df,X205019_s_at,'HCC')
partialPlot(t, new_df,X205019_s_at,'normal')
partialPlot(t, new_df,X215330_at ,'HCC')
partialPlot(t, new_df,X215330_at ,'normal')
A random forest will be created with a proximity matrix, to allow for its visualization using MDSplot, which reflects the very good separation between the cases, and allow to see the small number of exceptional cases likely to be misclassified by the model.
t <- tuneRF(new_df[,-1], new_df[,1],
stepFactor = 0.5,
mtryStart=2,
plot = TRUE,
ntreeTry = 50,
trace = TRUE,
improve = 1e-5,doBest=TRUE,proximity=TRUE)## mtry = 2 OOB error = 3.08%
## Searching left ...
## mtry = 4 OOB error = 3.08%
## 0 1e-05
## Searching right ...
## mtry = 1 OOB error = 3.08%
## 0 1e-05
MDSplot(t, new_df$type)
An alternative approach can be followed using caret, which allows for the metric of choice for the error rate computation. Here it is combined with cross validation for testing error calculation.
control <- trainControl(method="cv", number=10,returnResamp="all")
caret_res <- train(type ~., data=new_df, method="rf", metric="Accuracy", ntree = 100, trControl=control)
df = data.frame(caret_res$resample,test="caret")
ggplot(df,aes(x=mtry,y=Accuracy,col=test))+
stat_summary(fun.data=mean_se,geom="errorbar",width=0.2) +
stat_summary(fun=mean,geom="line") + facet_wrap(~test)
Parts of the random forest may be plotted using the below code as well.
cf=cforest(type ~ ., data=new_df, controls=cforest_control(mtry=4, mincriterion=0))
pt <- party:::prettytree(cf@ensemble[[1]], names(cf@data@get("input")))
pt## 1) X209219_at <= 7.154281; criterion = 14.948, statistic = 14.948
## 2) X217165_x_at <= 9.735407; criterion = 6.779, statistic = 6.779
## 3)* weights = 0
## 2) X217165_x_at > 9.735407
## 4) X216782_at <= 3.787851; criterion = 0.779, statistic = 0.779
## 5) X209821_at <= 3.600092; criterion = 1.503, statistic = 1.503
## 6)* weights = 0
## 5) X209821_at > 3.600092
## 7) X201656_at <= 5.233562; criterion = 2.55, statistic = 2.55
## 8)* weights = 0
## 7) X201656_at > 5.233562
## 9)* weights = 0
## 4) X216782_at > 3.787851
## 10)* weights = 0
## 1) X209219_at > 7.154281
## 11) X220491_at <= 11.31732; criterion = 5.213, statistic = 5.213
## 12) X214414_x_at <= 10.61344; criterion = 3.789, statistic = 3.789
## 13)* weights = 0
## 12) X214414_x_at > 10.61344
## 14)* weights = 0
## 11) X220491_at > 11.31732
## 15)* weights = 0(2.2) Decision trees
tree <- rpart(formula = type~.,new_df, method = "class")
rpart.plot(tree,type=4)
tree## n= 357
##
## node), split, n, loss, yval, (yprob)
## * denotes terminal node
##
## 1) root 357 176 HCC (0.50700280 0.49299720)
## 2) X205019_s_at< 5.410745 177 5 HCC (0.97175141 0.02824859) *
## 3) X205019_s_at>=5.410745 180 9 normal (0.05000000 0.95000000)
## 6) X201453_x_at>=9.290591 9 3 HCC (0.66666667 0.33333333) *
## 7) X201453_x_at< 9.290591 171 3 normal (0.01754386 0.98245614) *The tree based on the genes selected by Boruta is shown to be very simple, relying on 2 genes, yet efficient. The optimal complexity parameter (cp) is shown to be for size 2. cp is used to select the optimal tree size. If the cost of adding another variable to the decision tree from the current node is above the value of cp, then tree building does not continue. cp m ay be decreased to increase the size of the tree, but this will lead to overfitting.
printcp(tree)##
## Classification tree:
## rpart(formula = type ~ ., data = new_df, method = "class")
##
## Variables actually used in tree construction:
## [1] X201453_x_at X205019_s_at
##
## Root node error: 176/357 = 0.493
##
## n= 357
##
## CP nsplit rel error xerror xstd
## 1 0.920455 0 1.000000 1.085227 0.053546
## 2 0.017045 1 0.079545 0.096591 0.022862
## 3 0.010000 2 0.062500 0.125000 0.025816plotcp(tree)
Here, even when cp is lowered the min error remains for trees
considering 2 genes only.
tree <- rpart(formula = type~.,new_df, method = "class",cp=0.0000000001)
rpart.plot(tree,type=4)
printcp(tree)##
## Classification tree:
## rpart(formula = type ~ ., data = new_df, method = "class", cp = 1e-10)
##
## Variables actually used in tree construction:
## [1] X201453_x_at X205019_s_at
##
## Root node error: 176/357 = 0.493
##
## n= 357
##
## CP nsplit rel error xerror xstd
## 1 9.2045e-01 0 1.000000 1.068182 0.053601
## 2 1.7045e-02 1 0.079545 0.096591 0.022862
## 3 1.0000e-10 2 0.062500 0.125000 0.025816plotcp(tree)
new_df = new_df%>%
dplyr::mutate(id=row_number())
training = new_df%>%
slice_sample(prop=0.7)
nrow(training)## [1] 249testing = anti_join(new_df,training,by='id')
nrow(testing)## [1] 108training = training%>%
dplyr::select(-id)
testing = testing%>%
dplyr::select(-id)
new_df=new_df[-ncol(new_df)]tree <- rpart(formula = type~.,training, method = "class")
rpart.plot(tree,type=4)
p <- predict(tree, testing, type = 'class')
confusionMatrix(p, reference=as.factor(testing$type), positive="HCC")## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 45 5
## normal 4 54
##
## Accuracy : 0.9167
## 95% CI : (0.8477, 0.9612)
## No Information Rate : 0.5463
## P-Value [Acc > NIR] : <2e-16
##
## Kappa : 0.8322
##
## Mcnemar's Test P-Value : 1
##
## Sensitivity : 0.9184
## Specificity : 0.9153
## Pos Pred Value : 0.9000
## Neg Pred Value : 0.9310
## Prevalence : 0.4537
## Detection Rate : 0.4167
## Detection Prevalence : 0.4630
## Balanced Accuracy : 0.9168
##
## 'Positive' Class : HCC
## p <- predict(tree, testing, type = 'prob')
p <- p[,2]
r <- multiclass.roc(testing$type, p, percent = TRUE)## Setting direction: controls < casesroc <- r[['rocs']]
r <- roc[[1]]
plot.roc(r,
print.auc=TRUE,
auc.polygon=TRUE,
grid=c(0.1, 0.2),
grid.col=c("green", "red"),
max.auc.polygon=TRUE,
auc.polygon.col="lightblue",
print.thres=TRUE,
main= 'ROC Curve')
The results of the classificatoin task are shown to be very good, 92%
using the validation set approach, while the ROC curve displays an AUC
of 96%.
- Unsupervised
(3.1) PCA (principal component analysis)
pca <- prcomp(new_df[-1], scale = T, center = T)
summary(pca)## Importance of components:
## PC1 PC2 PC3 PC4 PC5 PC6 PC7
## Standard deviation 7.871 2.07937 1.97308 1.65389 1.57506 1.45081 1.3566
## Proportion of Variance 0.579 0.04041 0.03638 0.02556 0.02319 0.01967 0.0172
## Cumulative Proportion 0.579 0.61937 0.65576 0.68132 0.70451 0.72418 0.7414
## PC8 PC9 PC10 PC11 PC12 PC13 PC14
## Standard deviation 1.28549 1.13680 1.12476 1.08608 1.06423 1.00051 0.97815
## Proportion of Variance 0.01544 0.01208 0.01182 0.01102 0.01058 0.00936 0.00894
## Cumulative Proportion 0.75682 0.76890 0.78072 0.79175 0.80233 0.81169 0.82063
## PC15 PC16 PC17 PC18 PC19 PC20 PC21
## Standard deviation 0.95827 0.91860 0.89617 0.88337 0.84213 0.83302 0.79774
## Proportion of Variance 0.00858 0.00789 0.00751 0.00729 0.00663 0.00649 0.00595
## Cumulative Proportion 0.82921 0.83710 0.84460 0.85190 0.85853 0.86501 0.87096
## PC22 PC23 PC24 PC25 PC26 PC27 PC28
## Standard deviation 0.77956 0.74973 0.74137 0.73773 0.7017 0.70007 0.68742
## Proportion of Variance 0.00568 0.00525 0.00514 0.00509 0.0046 0.00458 0.00442
## Cumulative Proportion 0.87664 0.88189 0.88703 0.89211 0.8967 0.90130 0.90571
## PC29 PC30 PC31 PC32 PC33 PC34 PC35
## Standard deviation 0.6620 0.64704 0.63906 0.62981 0.6116 0.59977 0.58648
## Proportion of Variance 0.0041 0.00391 0.00382 0.00371 0.0035 0.00336 0.00321
## Cumulative Proportion 0.9098 0.91372 0.91754 0.92124 0.9247 0.92810 0.93132
## PC36 PC37 PC38 PC39 PC40 PC41 PC42
## Standard deviation 0.57812 0.55200 0.54352 0.53904 0.52690 0.52112 0.50759
## Proportion of Variance 0.00312 0.00285 0.00276 0.00272 0.00259 0.00254 0.00241
## Cumulative Proportion 0.93444 0.93729 0.94005 0.94276 0.94536 0.94790 0.95031
## PC43 PC44 PC45 PC46 PC47 PC48 PC49
## Standard deviation 0.49918 0.48156 0.46543 0.4627 0.45893 0.44405 0.44121
## Proportion of Variance 0.00233 0.00217 0.00202 0.0020 0.00197 0.00184 0.00182
## Cumulative Proportion 0.95263 0.95480 0.95683 0.9588 0.96080 0.96264 0.96446
## PC50 PC51 PC52 PC53 PC54 PC55 PC56
## Standard deviation 0.42328 0.4132 0.40808 0.40309 0.39369 0.38075 0.37738
## Proportion of Variance 0.00167 0.0016 0.00156 0.00152 0.00145 0.00135 0.00133
## Cumulative Proportion 0.96613 0.9677 0.96928 0.97080 0.97225 0.97361 0.97494
## PC57 PC58 PC59 PC60 PC61 PC62 PC63
## Standard deviation 0.3730 0.36660 0.36008 0.34527 0.33911 0.33591 0.32860
## Proportion of Variance 0.0013 0.00126 0.00121 0.00111 0.00107 0.00105 0.00101
## Cumulative Proportion 0.9762 0.97749 0.97871 0.97982 0.98089 0.98195 0.98296
## PC64 PC65 PC66 PC67 PC68 PC69 PC70
## Standard deviation 0.32261 0.3104 0.30629 0.30067 0.2931 0.28618 0.28263
## Proportion of Variance 0.00097 0.0009 0.00088 0.00084 0.0008 0.00077 0.00075
## Cumulative Proportion 0.98393 0.9848 0.98571 0.98655 0.9874 0.98812 0.98887
## PC71 PC72 PC73 PC74 PC75 PC76 PC77
## Standard deviation 0.27945 0.2739 0.26905 0.26446 0.25701 0.2541 0.24203
## Proportion of Variance 0.00073 0.0007 0.00068 0.00065 0.00062 0.0006 0.00055
## Cumulative Proportion 0.98960 0.9903 0.99097 0.99163 0.99225 0.9929 0.99340
## PC78 PC79 PC80 PC81 PC82 PC83 PC84
## Standard deviation 0.24027 0.23410 0.22825 0.22660 0.21291 0.2077 0.19666
## Proportion of Variance 0.00054 0.00051 0.00049 0.00048 0.00042 0.0004 0.00036
## Cumulative Proportion 0.99394 0.99445 0.99493 0.99541 0.99584 0.9962 0.99660
## PC85 PC86 PC87 PC88 PC89 PC90 PC91
## Standard deviation 0.19332 0.19225 0.18962 0.1792 0.17638 0.16815 0.16165
## Proportion of Variance 0.00035 0.00035 0.00034 0.0003 0.00029 0.00026 0.00024
## Cumulative Proportion 0.99695 0.99730 0.99763 0.9979 0.99822 0.99849 0.99873
## PC92 PC93 PC94 PC95 PC96 PC97 PC98
## Standard deviation 0.14864 0.1465 0.14197 0.11748 0.1025 0.08856 0.08376
## Proportion of Variance 0.00021 0.0002 0.00019 0.00013 0.0001 0.00007 0.00007
## Cumulative Proportion 0.99894 0.9991 0.99933 0.99946 0.9996 0.99963 0.99969
## PC99 PC100 PC101 PC102 PC103 PC104 PC105
## Standard deviation 0.08027 0.07474 0.06681 0.06098 0.05858 0.05596 0.05258
## Proportion of Variance 0.00006 0.00005 0.00004 0.00003 0.00003 0.00003 0.00003
## Cumulative Proportion 0.99975 0.99981 0.99985 0.99988 0.99992 0.99994 0.99997
## PC106 PC107
## Standard deviation 0.04307 0.03580
## Proportion of Variance 0.00002 0.00001
## Cumulative Proportion 0.99999 1.00000The following features could be also inspected in addition to the PC values for all the features:
center - the column means used to center the data scale - the column sd used to scale the data rotation - the direction of the vectors in terms of the original features. This information somehow allows to define new data in terms of the originial principal components. x - the value of each observation in the original dataset projected to the principal components
pca$center## X200606_at X200734_s_at X200882_s_at X200910_at X200954_at X201128_s_at
## 9.374889 7.818667 8.759570 8.739219 7.626392 7.823650
## X201184_s_at X201293_x_at X201398_s_at X201441_at X201453_x_at X201516_at
## 6.492758 11.787430 10.350992 10.437287 9.342188 6.344435
## X201527_at X201531_at X201577_at X201584_s_at X201656_at X202541_at
## 7.879729 8.864265 8.160946 7.139049 5.685224 5.745771
## X202737_s_at X202861_at X202940_at X202963_at X203316_s_at X203554_x_at
## 7.285719 6.740200 4.138498 6.356212 9.441368 6.476055
## X203755_at X204018_x_at X204301_at X204428_s_at X204641_at X204977_at
## 4.540840 8.242631 4.218386 6.786507 4.456363 5.809202
## X205019_s_at X205086_s_at X205298_s_at X205306_x_at X205392_s_at X205440_s_at
## 5.613971 4.395944 4.558095 7.244746 7.951639 4.132498
## X205531_s_at X205554_s_at X205740_s_at X205819_at X205858_at X205866_at
## 7.427662 6.804382 6.785219 4.826320 3.919385 7.427269
## X205890_s_at X205911_at X206380_s_at X206453_s_at X206643_at X206680_at
## 9.370218 4.558747 4.852652 8.704627 9.496211 6.197494
## X207076_s_at X207218_at X207262_at X207330_at X207609_s_at X207804_s_at
## 11.675686 10.754683 7.268148 5.547198 6.484005 4.835377
## X207828_s_at X207995_s_at X208079_s_at X208147_s_at X208816_x_at X209189_at
## 5.317209 4.691214 5.824389 10.434440 7.605523 7.713821
## X209219_at X209335_at X209365_s_at X209447_at X209458_x_at X209821_at
## 7.368462 6.903361 6.345929 6.567534 8.187004 4.017641
## X209825_s_at X210095_s_at X210481_s_at X210909_x_at X211023_at X211378_x_at
## 4.724996 10.107756 4.585991 4.533290 9.200251 11.666332
## X211628_x_at X211699_x_at X211745_x_at X211765_x_at X211978_x_at X212149_at
## 10.493783 7.794809 8.520843 11.734427 11.656419 9.295973
## X212551_at X212554_at X212661_x_at X213068_at X213629_x_at X214414_x_at
## 5.151116 5.877953 11.771346 4.525261 9.366080 9.434913
## X214421_x_at X214710_s_at X215138_s_at X215330_at X215768_at X216025_x_at
## 10.468979 4.907893 3.620553 4.327165 4.582341 10.782485
## X216661_x_at X216782_at X217165_x_at X217319_x_at X217414_x_at X217521_at
## 9.774730 3.678976 9.428647 8.283188 8.451891 8.400012
## X218002_s_at X218061_at X219485_s_at X219787_s_at X220017_x_at X220114_s_at
## 5.082640 8.683561 6.665557 4.345330 10.902075 4.809045
## X220116_at X220148_at X220491_at X220496_at X36829_at
## 4.865669 9.572932 9.111039 5.166438 6.407697pca$scale## X200606_at X200734_s_at X200882_s_at X200910_at X200954_at X201128_s_at
## 0.6425137 0.5434241 0.7359459 0.9496938 0.4565736 1.0281030
## X201184_s_at X201293_x_at X201398_s_at X201441_at X201453_x_at X201516_at
## 0.4154040 0.4949130 0.5496031 0.4337231 0.6280575 0.7400643
## X201527_at X201531_at X201577_at X201584_s_at X201656_at X202541_at
## 0.5278518 1.0399628 0.9409198 0.9529320 0.9893255 0.6889727
## X202737_s_at X202861_at X202940_at X202963_at X203316_s_at X203554_x_at
## 0.8261202 1.1867949 0.3756181 1.0216292 0.9553168 1.5315991
## X203755_at X204018_x_at X204301_at X204428_s_at X204641_at X204977_at
## 1.1706359 1.6902393 0.6539031 1.7626749 1.2094112 0.6042970
## X205019_s_at X205086_s_at X205298_s_at X205306_x_at X205392_s_at X205440_s_at
## 1.5848686 0.4197919 0.4999822 1.6451851 1.2809641 0.8871333
## X205531_s_at X205554_s_at X205740_s_at X205819_at X205858_at X205866_at
## 2.2333442 1.8516625 0.5359662 1.3040374 0.5381475 1.9206992
## X205890_s_at X205911_at X206380_s_at X206453_s_at X206643_at X206680_at
## 1.8636164 0.9961300 0.8860220 1.0417885 1.7083762 1.5287776
## X207076_s_at X207218_at X207262_at X207330_at X207609_s_at X207804_s_at
## 1.2654183 2.0601747 2.1346418 1.6256005 2.4993438 1.5752240
## X207828_s_at X207995_s_at X208079_s_at X208147_s_at X208816_x_at X209189_at
## 1.5147215 1.2633513 1.4660782 2.3529508 1.0394549 2.2805245
## X209219_at X209335_at X209365_s_at X209447_at X209458_x_at X209821_at
## 0.8746473 1.6551853 1.3081645 1.0149378 1.7233101 0.6408022
## X209825_s_at X210095_s_at X210481_s_at X210909_x_at X211023_at X211378_x_at
## 0.9662532 1.4186755 1.2538037 0.7895526 0.4172190 0.4816510
## X211628_x_at X211699_x_at X211745_x_at X211765_x_at X211978_x_at X212149_at
## 0.3937755 1.6263942 1.6957435 0.4975752 0.4612559 0.6405439
## X212551_at X212554_at X212661_x_at X213068_at X213629_x_at X214414_x_at
## 1.3167093 1.5422471 0.4824655 1.1037572 2.4640996 1.6182639
## X214421_x_at X214710_s_at X215138_s_at X215330_at X215768_at X216025_x_at
## 2.1382810 1.5598873 0.2277626 0.8379653 0.9227004 2.0451035
## X216661_x_at X216782_at X217165_x_at X217319_x_at X217414_x_at X217521_at
## 1.9766531 0.3054659 2.2551961 1.9686173 1.6198077 1.7112133
## X218002_s_at X218061_at X219485_s_at X219787_s_at X220017_x_at X220114_s_at
## 1.8887130 0.5436638 0.9655652 1.3443613 2.0023744 1.0922635
## X220116_at X220148_at X220491_at X220496_at X36829_at
## 1.8539806 1.6607159 3.3387035 1.3582285 0.8629149pca$rotation## PC1 PC2 PC3 PC4 PC5
## X200606_at -0.0631862475 -0.0013452204 0.116850576 0.102330297 -0.023913983
## X200734_s_at -0.0249130442 -0.0438019342 0.046393106 -0.108688185 0.011886175
## X200882_s_at -0.1051732525 0.0548578218 0.037639784 -0.042744479 -0.010109873
## X200910_at -0.1157067582 -0.0444512187 0.041728779 -0.014531303 -0.058205017
## X200954_at -0.0097182784 -0.1067619350 0.216494158 -0.095796594 -0.024129065
## X201128_s_at -0.1069191049 -0.0859303375 0.068989808 0.032116453 -0.015271573
## X201184_s_at -0.0604683101 -0.0751159887 -0.145409938 0.032895005 -0.028867763
## X201293_x_at -0.1090993200 -0.0790728312 0.115666887 -0.060146922 -0.053372110
## X201398_s_at -0.0804241409 -0.0021571866 0.222380224 -0.007127137 0.023403841
## X201441_at -0.0799365296 0.0121043062 -0.064264133 -0.185330153 -0.158019656
## X201453_x_at -0.0995292786 0.0039148971 0.154496755 -0.035395002 -0.014245458
## X201516_at -0.0904225305 -0.1134631917 0.061321046 -0.041578542 -0.090933921
## X201527_at -0.0907727555 -0.0919685852 0.039418035 0.018232831 -0.057141328
## X201531_at 0.0927361246 -0.0912042997 0.083681660 -0.027624378 0.020837169
## X201577_at -0.1080244912 -0.0546361640 0.123804582 -0.022903922 -0.085093392
## X201584_s_at -0.1011788839 -0.0967502856 -0.026731349 0.006352279 -0.061990071
## X201656_at -0.0981753603 -0.0081395296 0.078805272 0.082345856 0.135876245
## X202541_at -0.0709229085 -0.0026668904 0.215473090 0.136373826 -0.012174312
## X202737_s_at -0.0975967073 -0.0841213449 0.110603799 -0.026975191 -0.123682612
## X202861_at 0.1064967491 0.0274513420 0.010990840 -0.053682863 -0.027733490
## X202940_at -0.0003416825 -0.1208975418 -0.196407274 0.056306944 -0.099521113
## X202963_at -0.1005879183 -0.0155774193 0.070007450 0.020436992 0.042356723
## X203316_s_at -0.1099876980 -0.0187941880 0.073791183 0.032768670 -0.082756900
## X203554_x_at -0.1163242084 -0.0545960019 -0.021645681 -0.015833261 -0.097518641
## X203755_at -0.1078534217 -0.0860229247 -0.053724567 0.016277257 -0.144947266
## X204018_x_at 0.0853609536 -0.2945822902 -0.009242661 -0.184527608 0.133650299
## X204301_at 0.0898368164 0.0386524070 0.004918861 0.093331430 -0.029614137
## X204428_s_at 0.1174075637 0.0250013080 0.023357300 -0.035332049 -0.032862739
## X204641_at -0.1079002052 -0.0711517460 -0.039630808 -0.003277418 -0.100980423
## X204977_at -0.0883258588 -0.0264869103 0.067009852 0.069380825 0.022457831
## X205019_s_at 0.1190846152 -0.0066221555 -0.006990502 0.071997986 -0.037744189
## X205086_s_at -0.0832893779 -0.0471389759 -0.054467453 -0.099106254 -0.104511874
## X205298_s_at -0.0511450789 -0.0079084892 0.145116634 0.105789350 0.121264234
## X205306_x_at 0.0971811855 0.0425349807 0.072173174 -0.164772059 -0.116295096
## X205392_s_at 0.1075529384 0.0089517931 0.059779930 -0.023043761 -0.010113895
## X205440_s_at 0.0940394264 -0.0904997536 0.086987746 0.188034499 -0.060978870
## X205531_s_at 0.1060109953 0.0395689618 -0.015510724 -0.131986432 -0.145646477
## X205554_s_at 0.1142276140 -0.0076337501 0.095542652 0.035126042 -0.045200754
## X205740_s_at -0.0901209688 -0.0710214769 0.030809062 -0.043057187 -0.135711651
## X205819_at 0.0997433255 -0.1293280350 0.094061413 0.082595662 -0.081126648
## X205858_at 0.0967078322 -0.0847186785 0.073478668 0.110516113 -0.051857867
## X205866_at 0.1165250965 -0.0623565968 0.048967494 0.086005536 -0.079319372
## X205890_s_at -0.0861490907 -0.0439051609 0.070277486 0.022215752 -0.001578226
## X205911_at 0.1106469189 -0.0283534829 0.017979792 0.085045455 -0.057838460
## X206380_s_at 0.1063995646 -0.0931668683 0.050209271 0.090960012 -0.099142602
## X206453_s_at 0.1115454152 0.0488014899 0.036341725 -0.066374979 -0.031715337
## X206643_at 0.0554133596 0.0007476703 -0.088231303 -0.209319932 -0.367355535
## X206680_at 0.1092344567 -0.0689356556 0.065286853 0.044501515 -0.021916838
## X207076_s_at 0.1045007018 0.0300773364 0.031121440 -0.130720994 -0.154639411
## X207218_at 0.0921597644 0.1210548408 0.141431288 -0.202153986 0.008485268
## X207262_at 0.1121729204 0.0246222886 0.091821892 -0.064977832 -0.068317651
## X207330_at 0.0726275491 -0.0838529906 0.035109116 0.039945636 -0.028401532
## X207609_s_at 0.1159330895 0.0281758742 0.012757198 0.054949701 0.003038584
## X207804_s_at 0.1099548953 -0.0906221056 0.041678084 0.100424128 -0.102458601
## X207828_s_at -0.1133298355 -0.0483656642 -0.073400474 -0.016728140 -0.114816201
## X207995_s_at 0.1034477866 -0.0699829002 0.039333432 0.097721379 -0.162805997
## X208079_s_at -0.1092546355 -0.0220678531 -0.032839090 -0.064593635 -0.116068000
## X208147_s_at 0.0992659600 0.1339179277 0.112586719 -0.075466040 0.068616394
## X208816_x_at -0.0951857562 -0.1103053250 0.064169939 0.070082816 0.087494294
## X209189_at 0.1069311096 -0.0910079517 0.049666777 0.045133596 -0.003820081
## X209219_at -0.1064668789 -0.0238782370 0.053006576 -0.025822584 -0.054719917
## X209335_at 0.1028459918 -0.0674261383 0.056141508 0.155475445 0.045466420
## X209365_s_at 0.1180122752 -0.0585324822 0.042560152 0.091231098 -0.047425611
## X209447_at 0.1073009725 0.0266791486 -0.001225740 0.029927963 -0.019308478
## X209458_x_at 0.0854397484 -0.2937907550 -0.008481615 -0.185924411 0.133556655
## X209821_at 0.0620537593 -0.0948461788 0.189381200 0.204528371 -0.102749853
## X209825_s_at -0.1091787439 -0.0653400017 0.003718066 -0.028032470 -0.112706584
## X210095_s_at 0.0881312726 -0.1030868750 -0.055641724 0.172370655 -0.078518146
## X210481_s_at 0.1096516205 -0.0542436223 0.005430749 0.060575825 -0.099371723
## X210909_x_at 0.0982343225 0.0309987717 0.075437075 -0.020523037 -0.144725547
## X211023_at -0.0309603720 -0.0103171950 0.168002664 0.007157676 -0.176317266
## X211378_x_at -0.1102897574 -0.0757111128 0.103645273 -0.058072533 -0.042604561
## X211628_x_at -0.0842984748 -0.0458241463 0.058451287 -0.086703885 0.016749785
## X211699_x_at 0.0850410777 -0.2981848443 -0.010265725 -0.169671150 0.139028129
## X211745_x_at 0.0847852352 -0.2981174399 -0.010200479 -0.181326863 0.135255501
## X211765_x_at -0.1094390111 -0.0764029015 0.115578831 -0.064506264 -0.051436951
## X211978_x_at -0.1116168226 -0.0748513319 0.102527434 -0.053581111 -0.050100606
## X212149_at -0.0480147175 0.0776758701 0.279069413 0.001322159 0.105472241
## X212551_at -0.1000684873 0.0521497005 0.106518612 -0.069967268 0.073806206
## X212554_at -0.1051237097 0.0512569676 0.127481765 -0.032272302 0.069278290
## X212661_x_at -0.1089269606 -0.0809120926 0.113763148 -0.067052721 -0.059020493
## X213068_at 0.0766286644 -0.1219548122 0.147515362 0.147897266 0.034223212
## X213629_x_at 0.1082861020 -0.0270705443 0.004344764 0.009484140 -0.019050062
## X214414_x_at 0.0859227768 -0.2830410497 -0.037404561 -0.165259682 0.153510690
## X214421_x_at 0.0987338443 0.1225280258 0.172543963 -0.140024530 0.061765478
## X214710_s_at -0.1137184763 -0.0659135610 -0.013750846 -0.007662813 -0.119422436
## X215138_s_at 0.0533251521 0.0576398684 -0.204900792 0.018325291 0.074157318
## X215330_at 0.0792043689 -0.0784892079 0.054489676 0.058281509 -0.049253922
## X215768_at 0.0732376314 0.0451713249 0.010954457 -0.034033209 -0.065801300
## X216025_x_at 0.0988397475 0.1257140086 0.169860842 -0.136347579 0.065686635
## X216661_x_at 0.1002349184 0.1199410230 0.173276893 -0.141319946 0.051415927
## X216782_at 0.0630461688 -0.0055277054 -0.116464515 0.023126267 0.143155964
## X217165_x_at 0.1077135859 -0.0094903273 0.037435093 -0.002860340 0.010150475
## X217319_x_at 0.1081635694 0.1041719512 0.105002961 -0.127259472 -0.017006276
## X217414_x_at 0.0858213350 -0.2925570694 -0.017509351 -0.181091126 0.138508311
## X217521_at 0.0717431356 0.0178069503 -0.097738852 -0.215775540 -0.334203989
## X218002_s_at 0.1166418665 -0.0509520726 0.018823902 0.098021609 -0.052364338
## X218061_at -0.0964049160 0.0300409136 -0.018279805 -0.095561486 -0.066298385
## X219485_s_at -0.0973830565 -0.0484313714 0.203941589 0.019814804 -0.022701650
## X219787_s_at -0.1091407269 -0.0859101772 -0.012258991 0.045825665 -0.060281677
## X220017_x_at 0.0976005573 0.1319716419 0.168486945 -0.137597640 0.074442869
## X220114_s_at 0.1136222713 -0.0792313874 0.052100744 0.080154374 -0.107696505
## X220116_at 0.0969869684 0.0504968889 -0.004781609 0.048872168 -0.135124487
## X220148_at 0.0970375962 0.0954540975 0.079122839 -0.161796905 -0.089099105
## X220491_at 0.1071901382 -0.0444704873 0.006491845 0.050215110 -0.050625434
## X220496_at 0.1124185273 -0.0582224369 0.061857802 0.091651724 -0.116273539
## X36829_at 0.1054333120 0.0479642459 -0.051862668 -0.056088745 0.008227329
## PC6 PC7 PC8 PC9
## X200606_at 0.255505177 -7.871887e-02 0.0249552479 -3.296766e-01
## X200734_s_at -0.346324837 7.569158e-02 0.3021284808 3.041295e-01
## X200882_s_at 0.056993197 -1.586431e-02 -0.1169282738 -1.837555e-02
## X200910_at 0.043318150 -1.370049e-02 -0.0868459597 -7.754711e-02
## X200954_at -0.230785340 3.037360e-01 0.0820424993 -2.164275e-01
## X201128_s_at 0.026161501 -8.872017e-02 0.0955452139 -7.577290e-02
## X201184_s_at -0.252900524 -5.745779e-02 0.2378090580 -1.457900e-01
## X201293_x_at -0.129732614 8.269680e-02 -0.1092891539 -3.473210e-02
## X201398_s_at 0.034730585 -1.186090e-01 0.0905447111 2.859328e-02
## X201441_at -0.230679262 5.136021e-02 -0.0537087228 -4.068093e-02
## X201453_x_at 0.069875588 1.137677e-01 -0.0521567712 4.353439e-02
## X201516_at -0.066099489 7.450859e-02 0.0756914014 3.962560e-02
## X201527_at -0.202921263 8.190650e-02 0.0372798375 -1.184146e-01
## X201531_at -0.071008595 -1.426392e-02 -0.0134662912 -2.188247e-01
## X201577_at -0.003131560 7.819652e-02 0.0098548816 3.444963e-03
## X201584_s_at -0.057060778 -7.778527e-02 -0.0703177943 -1.344404e-01
## X201656_at 0.089496282 -7.299216e-02 0.0221040326 -3.883236e-02
## X202541_at 0.167801707 7.751182e-02 0.1540099365 9.013439e-03
## X202737_s_at 0.015884860 8.617279e-02 0.1437036151 3.164070e-02
## X202861_at -0.057483054 4.775791e-02 0.1257865543 -2.070105e-01
## X202940_at 0.070322277 -1.845494e-01 0.3185973571 -1.435167e-01
## X202963_at -0.087742899 -1.587754e-01 -0.0231883161 1.011593e-01
## X203316_s_at 0.122675272 -6.443313e-02 -0.1008937364 -8.294244e-03
## X203554_x_at -0.010441342 -4.346785e-02 -0.0432394353 9.868523e-02
## X203755_at 0.035467909 -2.199294e-02 0.0061936600 1.394696e-01
## X204018_x_at 0.093240624 9.371440e-03 -0.0143372037 2.530537e-02
## X204301_at 0.107697833 1.936000e-01 -0.0570945374 -3.309472e-02
## X204428_s_at 0.014294210 4.701114e-02 0.0342812016 1.220152e-02
## X204641_at 0.088368624 -1.193984e-02 -0.0830935156 1.131470e-01
## X204977_at 0.099058086 2.913084e-02 0.1195957576 -5.802200e-02
## X205019_s_at -0.020562683 6.150987e-02 -0.0183762764 -4.413754e-02
## X205086_s_at 0.074309460 2.507765e-02 -0.0783961499 1.161951e-03
## X205298_s_at -0.096937752 -1.213539e-01 0.1201001176 2.580245e-01
## X205306_x_at -0.033267131 -6.432274e-02 0.0363997291 5.860746e-02
## X205392_s_at -0.049089027 1.643998e-02 -0.0952522933 1.267258e-02
## X205440_s_at -0.029529926 -3.593995e-02 -0.0319940984 3.438656e-02
## X205531_s_at -0.047546780 -1.571070e-02 0.0514005510 2.045734e-02
## X205554_s_at -0.026804655 1.445472e-02 -0.0630505370 1.722742e-02
## X205740_s_at -0.017724096 9.032966e-03 0.1081129652 -1.299369e-01
## X205819_at -0.057506851 -1.050349e-02 -0.0916514725 1.437685e-01
## X205858_at -0.063310056 -7.641620e-02 -0.1019474821 -7.173186e-02
## X205866_at -0.056400663 2.833909e-02 -0.0698583201 2.967421e-02
## X205890_s_at -0.149683106 -2.888112e-01 0.0502325413 -3.071088e-02
## X205911_at 0.041100742 2.077017e-02 -0.0021480748 -2.256236e-02
## X206380_s_at -0.034388900 3.356503e-02 -0.0879450181 5.948685e-02
## X206453_s_at 0.022266157 3.017758e-02 0.0005410684 -5.256787e-02
## X206643_at 0.039531567 -2.955291e-01 -0.0018366789 -3.375990e-02
## X206680_at -0.005010883 -3.629576e-02 -0.0462051475 7.696579e-02
## X207076_s_at -0.057496942 4.809567e-02 0.0064140558 -7.151313e-02
## X207218_at -0.059427688 -4.846727e-02 0.0456322038 9.111392e-02
## X207262_at 0.039589273 -1.939186e-02 0.0445856033 7.574665e-02
## X207330_at -0.014834795 -9.775960e-02 0.0662083520 6.669467e-02
## X207609_s_at 0.053751061 1.071127e-01 0.0110375232 -1.681112e-02
## X207804_s_at -0.005104184 1.870030e-02 -0.0848665855 6.722711e-02
## X207828_s_at 0.030209959 -2.035178e-02 -0.1206363411 2.313142e-02
## X207995_s_at 0.030947821 5.696130e-02 -0.0542531968 4.221910e-02
## X208079_s_at -0.016273868 -2.820050e-03 -0.0118799700 3.215267e-02
## X208147_s_at -0.092031995 -5.483365e-02 0.0363942223 4.145165e-02
## X208816_x_at -0.152417061 -1.265207e-01 -0.0442237200 4.112573e-02
## X209189_at -0.024742787 5.071677e-02 0.0247217479 -1.062141e-01
## X209219_at 0.065168711 9.107705e-02 -0.0943659484 -1.163747e-01
## X209335_at -0.151453250 -1.412886e-01 -0.0327875443 -4.926174e-02
## X209365_s_at -0.055606037 6.969545e-03 -0.0441244528 -1.381890e-02
## X209447_at 0.034669993 -4.094163e-02 0.1032646594 8.571764e-03
## X209458_x_at 0.102296703 3.397049e-03 -0.0148433139 1.195532e-02
## X209821_at 0.029418843 -1.998047e-01 -0.0348994232 8.240168e-02
## X209825_s_at 0.059804416 1.102079e-02 -0.0786348669 -2.094248e-02
## X210095_s_at -0.057677526 -1.002977e-01 0.0043519217 -3.802150e-02
## X210481_s_at 0.015532744 5.741234e-02 -0.0902268463 5.658675e-02
## X210909_x_at 0.106369121 1.617584e-01 -0.0478565641 5.297266e-02
## X211023_at 0.279685152 -6.988262e-02 0.1784910632 -5.014233e-03
## X211378_x_at -0.128212014 8.314150e-02 -0.1037097465 -2.348168e-02
## X211628_x_at 0.042045202 -6.547469e-02 0.0622001328 9.272670e-02
## X211699_x_at 0.101056755 -3.353254e-03 -0.0109944451 1.011061e-02
## X211745_x_at 0.105272459 3.963268e-03 -0.0015698719 1.130677e-02
## X211765_x_at -0.125959460 8.472902e-02 -0.1081778706 -3.646151e-02
## X211978_x_at -0.124321308 5.580917e-02 -0.0896552482 -3.174537e-02
## X212149_at 0.018085827 -2.833657e-03 0.2315094449 7.520848e-03
## X212551_at 0.080193536 -7.041725e-02 -0.0987071097 -1.232286e-01
## X212554_at 0.067741556 -1.051224e-01 -0.0837523278 -6.562373e-02
## X212661_x_at -0.135854085 8.162112e-02 -0.1071931604 -4.109365e-02
## X213068_at -0.166587809 -2.244887e-01 -0.0774682754 -1.047456e-01
## X213629_x_at -0.012433095 5.488311e-02 0.1172165478 7.538876e-02
## X214414_x_at 0.114870565 -1.689276e-02 0.0278320260 3.602467e-02
## X214421_x_at 0.006436107 -8.660225e-02 -0.1131006726 -4.042090e-02
## X214710_s_at 0.031843797 -3.940178e-02 -0.0241989123 1.054527e-01
## X215138_s_at -0.090060480 1.839766e-02 -0.2277400211 1.035090e-01
## X215330_at 0.006169845 4.565145e-02 0.1339836971 -2.813229e-01
## X215768_at 0.060620886 3.173330e-02 0.2746881534 1.149084e-01
## X216025_x_at 0.006537369 -8.800347e-02 -0.1116420681 -2.889652e-02
## X216661_x_at 0.006453496 -6.868068e-02 -0.1204068695 -4.757698e-02
## X216782_at -0.128519006 -2.149921e-01 -0.0470008328 -1.252237e-01
## X217165_x_at -0.006168911 7.116124e-02 0.1207190701 6.729081e-02
## X217319_x_at -0.003074166 -3.946723e-02 0.0445223384 -2.482228e-02
## X217414_x_at 0.101072678 -9.754863e-05 -0.0048288616 2.951003e-02
## X217521_at 0.035520150 -2.427420e-01 0.0037793368 -6.106118e-02
## X218002_s_at -0.030470588 -2.298486e-03 -0.0249816738 -2.682803e-02
## X218061_at -0.034292255 3.312317e-02 -0.0368797292 -2.470818e-02
## X219485_s_at 0.069001630 -2.731590e-02 0.0176973346 8.423834e-02
## X219787_s_at 0.057518581 -1.240240e-02 -0.0232271890 1.673064e-01
## X220017_x_at 0.009143478 -9.706102e-02 -0.1157282872 -2.539929e-02
## X220114_s_at -0.017815444 1.828843e-02 -0.0601239373 -8.680566e-05
## X220116_at 0.094029519 2.213917e-01 0.0510275547 4.070544e-02
## X220148_at -0.008174977 -1.298848e-01 0.0472774808 1.061679e-01
## X220491_at -0.053869632 -2.912826e-02 -0.0210158631 -8.945294e-03
## X220496_at 0.014343585 7.137531e-02 -0.0752923119 8.880293e-02
## X36829_at -0.056332304 6.722353e-02 0.0841818667 -2.115615e-01
## PC10 PC11 PC12 PC13
## X200606_at 0.0678212719 -0.028098669 0.0192106380 -0.083774665
## X200734_s_at 0.0897129911 0.199909088 0.0506575562 0.139625519
## X200882_s_at 0.0817029121 0.094564845 -0.0078796191 -0.028458605
## X200910_at 0.0537064742 0.021642102 -0.0038067261 -0.028723976
## X200954_at 0.2528379539 -0.022574022 -0.1295423084 -0.143605381
## X201128_s_at 0.0508565441 0.042718380 0.0140883447 0.119079842
## X201184_s_at 0.2105968443 -0.007737822 0.1710685142 0.095775309
## X201293_x_at -0.1452802180 -0.102529011 0.0496919513 0.018400998
## X201398_s_at -0.0138354987 0.108105684 -0.0505294074 -0.120964641
## X201441_at 0.0962454225 0.007471553 -0.0783157110 0.263735246
## X201453_x_at -0.0188984846 0.062579928 0.0212608702 0.116811266
## X201516_at -0.1052448754 -0.065020628 0.0046232956 -0.059819603
## X201527_at 0.1718377525 -0.068421283 0.0588583033 -0.079338084
## X201531_at -0.2979958220 0.121241321 -0.0705051822 -0.102542000
## X201577_at 0.0143815117 -0.069490017 0.0174472372 0.018901675
## X201584_s_at 0.0725463160 0.079695988 0.1614793416 -0.025225877
## X201656_at 0.0001523682 -0.094641035 0.0513673352 0.014846227
## X202541_at 0.1174337943 -0.002803864 0.0945725380 0.100821199
## X202737_s_at -0.0344959982 0.017484646 0.0316661401 0.058142086
## X202861_at -0.0825171319 0.082580171 0.1071751564 -0.054662561
## X202940_at 0.2034672934 -0.085131201 0.1199488580 -0.127865188
## X202963_at -0.1042389599 0.079166524 -0.0703503133 0.080317504
## X203316_s_at 0.0941334712 0.033037290 -0.0557957463 0.118738840
## X203554_x_at 0.0065409348 0.052854473 0.1363760543 0.037189762
## X203755_at -0.0982235583 0.017920541 0.1773160082 -0.043575448
## X204018_x_at 0.0407221305 -0.008624761 -0.0009613441 0.028589342
## X204301_at 0.0709268539 0.075604510 0.0203512065 0.153157110
## X204428_s_at 0.0436739209 -0.098555975 0.0989063906 -0.028152157
## X204641_at -0.0273696737 0.071209798 0.2073443980 0.006139707
## X204977_at -0.1176600719 0.001072585 -0.0558626256 0.073354151
## X205019_s_at -0.0037209750 0.051744758 0.0418177265 0.032320508
## X205086_s_at 0.0790152317 0.098107188 0.0374677838 -0.154221985
## X205298_s_at 0.0876816610 -0.121916240 0.0360071794 -0.423535760
## X205306_x_at 0.0031744847 -0.030170855 -0.0857852179 0.042214941
## X205392_s_at 0.1262506263 0.055047234 -0.2053016458 0.063403220
## X205440_s_at -0.0274632412 -0.009235668 -0.0213805123 0.280387875
## X205531_s_at 0.0622754276 -0.048224443 -0.0639085304 0.004070431
## X205554_s_at 0.0720372596 -0.034704182 -0.1241970509 0.061706068
## X205740_s_at 0.2125015138 0.068729413 0.0470098724 -0.037842120
## X205819_at 0.0541868338 -0.028269179 -0.0373184607 -0.147489539
## X205858_at 0.0977082864 0.106263351 -0.0223141076 -0.049311346
## X205866_at -0.0042395148 -0.014227699 0.0184689571 -0.008527767
## X205890_s_at 0.0588516807 -0.087378094 0.0375684060 -0.118877173
## X205911_at 0.0633298311 0.125235906 0.0513126879 -0.019261625
## X206380_s_at 0.0097733736 0.072550098 -0.0065067244 -0.086365033
## X206453_s_at -0.0065949949 -0.111592706 0.0133072869 0.041063635
## X206643_at -0.0974152142 0.045158401 -0.1760831123 -0.070654571
## X206680_at 0.0538626468 -0.015638695 -0.0213701410 -0.101291931
## X207076_s_at 0.0132314529 -0.169000419 -0.0299266920 -0.055916668
## X207218_at 0.0251699792 -0.080226349 -0.0438614954 0.037656577
## X207262_at -0.0225956590 0.036860215 0.0158167492 -0.068235221
## X207330_at 0.0941854695 0.199592809 0.1402438067 0.081750136
## X207609_s_at -0.0335189856 0.011271389 0.1300572367 -0.028735480
## X207804_s_at 0.0410294067 0.089556573 -0.0079323595 -0.062315225
## X207828_s_at 0.0008617477 0.039203634 0.1674603248 0.053482024
## X207995_s_at 0.0012578106 0.059854189 -0.0310207464 -0.129807919
## X208079_s_at 0.0327751472 0.119793383 0.1195959401 0.048858486
## X208147_s_at -0.0430634554 0.133496925 0.0610832582 0.096462020
## X208816_x_at -0.0992580116 0.032151656 -0.1145783742 -0.080643085
## X209189_at -0.2157624275 0.011426996 0.0298720876 0.023207421
## X209219_at 0.0575881626 0.137140866 -0.0130246159 0.077470360
## X209335_at -0.0941112213 -0.037428604 -0.0172761686 0.106045434
## X209365_s_at -0.0414107510 0.007483761 0.0310449141 -0.003381628
## X209447_at 0.0032317837 -0.057289710 -0.0025530979 0.092191014
## X209458_x_at 0.0369214373 -0.006812405 -0.0029896747 0.024833381
## X209821_at 0.1797207600 0.041590262 -0.1302934751 0.161904287
## X209825_s_at -0.0780764116 -0.012172594 0.0761957653 -0.100765293
## X210095_s_at -0.1499447680 0.048980874 0.1792753343 0.056434165
## X210481_s_at 0.0302179690 0.099399022 -0.0120051045 -0.132189642
## X210909_x_at 0.0658124563 -0.053510622 -0.0543718138 -0.023102661
## X211023_at -0.0151378428 -0.319382077 0.0679323887 0.122982044
## X211378_x_at -0.1510614191 -0.094353433 0.0411787009 0.027191459
## X211628_x_at -0.1519539163 0.233813860 -0.1895026701 -0.086117096
## X211699_x_at 0.0390315577 0.006524733 -0.0001284461 0.025551744
## X211745_x_at 0.0338395125 0.009873472 0.0020936885 0.034177431
## X211765_x_at -0.1429471665 -0.102259791 0.0424243072 0.012956772
## X211978_x_at -0.1337390927 -0.101241063 0.0455196098 0.007091826
## X212149_at -0.0534040088 0.270414768 -0.0389517611 -0.147917834
## X212551_at 0.0058719131 0.161466933 -0.1044956238 -0.020179406
## X212554_at 0.0321084008 0.184742683 -0.0976339719 0.018185485
## X212661_x_at -0.1341553368 -0.097269518 0.0484421069 0.016638791
## X213068_at 0.0348550765 -0.084564669 -0.0274573781 0.198663326
## X213629_x_at -0.1335104245 -0.048330563 0.0801994959 -0.098591614
## X214414_x_at 0.0280591426 0.015485199 0.0153901389 0.061916572
## X214421_x_at 0.0566104346 0.002739358 0.2662057780 -0.017925424
## X214710_s_at -0.0517099339 0.006786511 0.1570057061 -0.029703252
## X215138_s_at 0.1804336839 0.183874561 0.1302725920 -0.106953986
## X215330_at -0.1622800251 0.205053971 0.0510889401 -0.075191539
## X215768_at -0.1697249742 0.187434586 0.0480500303 0.157324372
## X216025_x_at 0.0421569222 0.009064453 0.2648696173 -0.008338974
## X216661_x_at 0.0358038490 -0.006997307 0.2407285860 -0.027622254
## X216782_at -0.0916860838 0.050539591 0.0378385276 0.144910582
## X217165_x_at -0.1305689095 -0.046526802 0.0498492629 -0.097270474
## X217319_x_at 0.0426018532 -0.001916886 0.0396804792 -0.003021645
## X217414_x_at 0.0290226877 -0.005746402 -0.0008326495 0.024202600
## X217521_at -0.0717773411 0.059329385 -0.1438851043 -0.072352557
## X218002_s_at -0.0257164298 -0.004327013 0.0664854354 0.009536517
## X218061_at 0.1001352756 0.217494363 0.0080831320 0.019785412
## X219485_s_at 0.0825519849 0.021044741 -0.0201872667 0.090009326
## X219787_s_at -0.1420921485 0.078397878 0.1863682712 0.024897213
## X220017_x_at 0.0445072327 0.018854653 0.2692177615 -0.002308250
## X220114_s_at 0.0467977623 0.075612680 0.0256011447 -0.060156866
## X220116_at 0.0036872680 0.106389743 0.0142199400 0.110627640
## X220148_at 0.0217942840 -0.101476644 0.0411658167 0.108477984
## X220491_at -0.0696551460 -0.079840885 0.0676843107 -0.040510606
## X220496_at 0.0310685658 0.037532705 -0.0022503690 -0.030582377
## X36829_at -0.0854509534 0.160799778 0.0911357493 0.008394161
## PC14 PC15 PC16 PC17
## X200606_at 0.2214569117 0.0900278956 -0.1289076764 0.1853674621
## X200734_s_at 0.2972367838 0.0776798501 -0.1297173436 0.1580495699
## X200882_s_at 0.0531423170 0.0748495437 0.0298307288 -0.0904072686
## X200910_at 0.0023436161 -0.0492764203 0.0472307977 -0.0435164303
## X200954_at -0.0491346327 -0.2454362796 -0.0286319044 0.0441717209
## X201128_s_at 0.0358073869 -0.0300400673 0.0128686296 -0.0559671055
## X201184_s_at -0.0043912855 0.1948855597 0.1359641665 -0.1121815909
## X201293_x_at -0.0835544637 -0.0259327367 0.1049946895 0.0873409930
## X201398_s_at -0.1704359926 -0.2807020900 -0.0291843801 -0.0430535028
## X201441_at 0.0430586113 0.0121833746 0.0578587754 -0.0077475334
## X201453_x_at -0.0267832272 0.1203852640 0.0640660943 -0.0112099233
## X201516_at 0.1623506599 0.0156355707 -0.0796451197 -0.2264267382
## X201527_at -0.0091725623 0.0820362848 -0.1747053157 -0.0713240787
## X201531_at 0.0321664057 0.0480764464 0.0147006500 -0.1977265928
## X201577_at 0.0816850920 -0.1066758646 0.0977340417 -0.0137547679
## X201584_s_at -0.0582341749 -0.0653455004 0.1109770942 -0.1227330065
## X201656_at -0.0115419604 0.0632997488 0.1130330184 0.1668687991
## X202541_at -0.0351647846 -0.0821079002 -0.1434053188 0.0581860707
## X202737_s_at -0.0014360820 -0.0918214409 -0.0549798706 -0.0580060741
## X202861_at 0.0421491628 0.0540287753 -0.0913449549 0.0393651406
## X202940_at -0.0956953842 -0.0069106106 0.4182708076 0.0630515264
## X202963_at -0.0207960125 0.1316961564 0.1178912230 0.1651385648
## X203316_s_at 0.0537074349 0.0249056782 -0.0072097644 -0.0343411336
## X203554_x_at 0.0428651448 0.0434981597 0.0230319489 0.0262067589
## X203755_at 0.0648319884 0.0112202312 -0.0423029743 0.0678516335
## X204018_x_at -0.0214196241 0.0165573118 -0.0127196058 0.0333465630
## X204301_at 0.0057235562 -0.0681187782 -0.0078337125 0.0638435070
## X204428_s_at 0.0331854729 0.0237338080 0.0027528810 0.0080402444
## X204641_at -0.0010700110 -0.0168514319 -0.0387909081 0.0286158214
## X204977_at 0.1299704392 0.1072128351 0.2580749349 -0.0343765598
## X205019_s_at 0.0417372113 -0.0749537352 0.0190360492 0.0941255685
## X205086_s_at -0.1780536455 0.0197151372 -0.0470175434 0.1733342333
## X205298_s_at -0.1761366150 0.2075212969 -0.2098742894 0.2062208444
## X205306_x_at 0.1381342267 -0.0512923305 0.0717823614 0.0483611767
## X205392_s_at 0.0863247671 0.1015668023 0.1952209098 -0.0309927066
## X205440_s_at -0.1300118557 0.0397690510 0.0049686732 -0.0611080404
## X205531_s_at 0.0107432550 0.0303046756 -0.1409868297 0.0725999891
## X205554_s_at 0.0279511833 0.1117985673 0.1185761530 -0.0240914297
## X205740_s_at -0.1384335336 0.0574409663 -0.0444241496 0.0293026056
## X205819_at 0.0270311277 0.0901445734 0.0993595784 -0.0124743195
## X205858_at 0.0318284456 -0.0764175636 0.0751146377 0.1477566436
## X205866_at 0.0401185126 0.0482275900 0.0273689631 0.0305472791
## X205890_s_at 0.1835736954 0.0929871296 0.0640584296 -0.0551408006
## X205911_at 0.0273407329 -0.1172064805 0.0214717459 0.1256850549
## X206380_s_at 0.0582392332 0.0739072169 0.1563474911 -0.0097288806
## X206453_s_at -0.0177305206 0.1269586456 0.0264785228 -0.0173880797
## X206643_at -0.0657931202 -0.0618095906 -0.1165132086 0.0307034591
## X206680_at 0.1037319171 -0.0007675910 0.1252998031 0.0056633549
## X207076_s_at -0.0143997659 -0.0689622515 -0.0519461520 -0.0248637619
## X207218_at -0.0792835533 0.0017734469 0.1367487465 0.0436313454
## X207262_at 0.0101868258 0.0009404891 -0.0540810274 0.0042330771
## X207330_at -0.0762211696 -0.2749149811 -0.0976370867 -0.4255785786
## X207609_s_at 0.0234414411 -0.0109090828 0.0147913670 0.0295555244
## X207804_s_at 0.0222420916 0.0723481231 0.1033993558 0.0301913275
## X207828_s_at -0.0331875423 0.0573567356 0.0121946496 -0.0156490447
## X207995_s_at -0.0639383606 0.1514777581 0.0574176798 -0.0186955018
## X208079_s_at 0.0902648221 0.0269985430 0.0076118321 0.0243407904
## X208147_s_at -0.0799772485 0.0614852786 -0.0231933107 -0.0231214573
## X208816_x_at 0.1064670418 -0.0821887625 -0.0188287351 0.0008463253
## X209189_at 0.0055562612 0.0656824763 -0.0919522293 -0.0829342090
## X209219_at 0.0821524245 0.1412051210 -0.1111552137 0.1163490791
## X209335_at 0.0182562295 -0.0150835194 -0.0512359479 -0.0440061600
## X209365_s_at 0.0616480079 -0.0057595957 -0.0314267151 0.0002009012
## X209447_at -0.0760963673 0.0251605446 0.0002025264 0.0493019337
## X209458_x_at -0.0083773144 0.0149491052 -0.0038977268 0.0257354649
## X209821_at -0.1256894546 0.0548088515 -0.0645273227 -0.0714801045
## X209825_s_at 0.0278212815 -0.0563785107 0.0089784213 -0.0310129294
## X210095_s_at -0.0975299355 -0.1002408638 -0.1289332705 0.0362718284
## X210481_s_at 0.0210707158 0.0597621448 0.0926270193 -0.0206348952
## X210909_x_at 0.0287204223 -0.0617734595 -0.0440782761 0.0857854446
## X211023_at 0.3529095088 -0.1395455181 0.0800650919 0.0103828848
## X211378_x_at -0.0897472965 -0.0207063333 0.1141936598 0.0887030439
## X211628_x_at 0.1928250183 -0.1020436939 0.0775231367 -0.0862385419
## X211699_x_at -0.0075710973 0.0150598341 -0.0254198829 0.0326902332
## X211745_x_at -0.0127624946 0.0023919501 -0.0022220205 0.0240035121
## X211765_x_at -0.0838102332 -0.0251200116 0.1029364564 0.0853231508
## X211978_x_at -0.0929895364 -0.0399349940 0.0804371359 0.0830569836
## X212149_at -0.0164678982 -0.2668180292 0.1704450795 0.0903029267
## X212551_at 0.0311042718 0.1552939362 0.0311447130 -0.0232509227
## X212554_at 0.0610074142 0.1345850685 0.0325082157 0.0132032281
## X212661_x_at -0.0912567302 -0.0230106664 0.0941652090 0.0966063363
## X213068_at 0.0107703649 -0.0880352425 -0.1355748532 0.0552579154
## X213629_x_at 0.1678554040 0.0680885748 -0.0275186724 -0.0582875657
## X214414_x_at -0.0008870505 0.0094152128 -0.0156352677 0.0107809667
## X214421_x_at 0.0023804270 0.0234053327 0.0030373049 -0.0573228504
## X214710_s_at 0.0445786327 -0.0415583251 0.0127752254 0.0201376237
## X215138_s_at 0.1734451637 -0.2808200104 0.1841741810 0.0457062737
## X215330_at -0.0406713920 0.1721806310 0.0103434228 0.0456760226
## X215768_at -0.3440210593 0.1051297332 0.2048563887 0.0526202454
## X216025_x_at 0.0057005224 0.0355720479 0.0113760611 -0.0509146131
## X216661_x_at -0.0124219510 0.0138738747 0.0003675067 -0.0563890527
## X216782_at 0.1370989315 -0.1727729724 -0.0469059059 0.4521788232
## X217165_x_at 0.1850273018 0.0998493413 -0.0014043928 -0.0827772161
## X217319_x_at 0.0323911265 0.0242190476 0.0319245257 0.0394040739
## X217414_x_at -0.0157850416 0.0148390476 -0.0256487868 0.0135579045
## X217521_at -0.0553268195 -0.0428307598 -0.1124657991 0.0608207388
## X218002_s_at 0.0354552973 -0.0564633946 -0.0139809611 0.0600027661
## X218061_at 0.1183473458 0.2023970127 -0.1332720589 -0.0033482794
## X219485_s_at -0.0618319048 0.0836133607 -0.1346806743 0.0486321438
## X219787_s_at 0.0300582756 0.0030136652 -0.0439607790 0.0595038673
## X220017_x_at 0.0021858048 0.0368465386 0.0219799460 -0.0503222704
## X220114_s_at 0.0356458598 0.0456454508 0.0274286578 0.0342718140
## X220116_at -0.0136376546 -0.0435745716 -0.0428429241 0.1807186738
## X220148_at -0.0234648973 -0.0015475879 0.1108779053 0.0562322199
## X220491_at 0.0420607858 0.0159397665 -0.0522424519 -0.0338435553
## X220496_at 0.0236291717 0.0293798649 0.0625111194 0.0215509235
## X36829_at 0.0729504605 0.0338117340 -0.0006077768 0.0743596385
## PC18 PC19 PC20 PC21 PC22
## X200606_at -7.939318e-02 0.296310522 -0.038788717 0.2138602087 -0.318575898
## X200734_s_at -1.391927e-01 0.201879611 -0.096354941 -0.1587707239 -0.040160451
## X200882_s_at -6.902717e-02 -0.183088754 0.110642532 -0.0335812448 0.023502389
## X200910_at -8.868265e-02 -0.089074224 0.053483801 -0.0532299964 -0.013304517
## X200954_at 4.624803e-02 0.034126269 0.117767284 -0.1081573177 -0.168954261
## X201128_s_at -2.188018e-01 -0.030248930 -0.093642874 -0.0961944062 0.047902810
## X201184_s_at -1.498317e-01 0.022791121 -0.197117843 0.2121299253 0.017971138
## X201293_x_at 1.271202e-02 0.081167892 -0.070621424 0.0387111633 -0.015587169
## X201398_s_at -1.774897e-01 -0.022202277 -0.092913437 0.0709789931 -0.057559047
## X201441_at 7.410520e-02 -0.026439377 0.015493307 -0.0489612587 -0.021758419
## X201453_x_at 3.193071e-02 -0.069828193 0.047974421 0.0929373563 0.171921928
## X201516_at 1.524720e-02 -0.283887848 -0.123396600 -0.1011352972 0.002000039
## X201527_at -3.657317e-02 0.076296425 -0.068927106 0.1260600858 0.123379885
## X201531_at -6.725879e-03 0.036509249 0.085513383 -0.0833531317 0.094569305
## X201577_at -6.058672e-02 -0.090863342 0.015072260 -0.0494027145 0.007616448
## X201584_s_at -7.098868e-02 -0.096521262 0.219720493 0.1085891357 0.141074357
## X201656_at 9.204135e-02 0.174680861 -0.038570191 -0.0900226759 0.035806616
## X202541_at 3.779884e-02 0.103352999 0.175181818 0.2205467627 -0.027575640
## X202737_s_at 8.103626e-02 -0.067958605 -0.014504881 -0.0295912731 -0.082255260
## X202861_at -6.830211e-02 0.013795354 0.115020898 -0.0243284737 0.144178635
## X202940_at 2.460264e-01 0.034332026 -0.033386270 -0.2375128853 -0.107902291
## X202963_at -1.404194e-01 -0.003030876 0.139920484 0.1241545886 0.068562066
## X203316_s_at -7.953413e-02 -0.027411412 0.113054072 -0.0478277852 0.001172136
## X203554_x_at 6.750554e-03 -0.001774142 0.088320234 0.0630428650 0.002885955
## X203755_at 5.714718e-02 0.024703039 0.040836239 -0.0072238871 -0.050860282
## X204018_x_at -4.871224e-02 0.007477877 0.002893088 0.0204177001 0.012269370
## X204301_at -6.643200e-02 0.020678835 -0.126705559 0.1026371727 0.060131360
## X204428_s_at 4.994323e-02 -0.035922793 0.023499684 0.0575569854 -0.064522458
## X204641_at 1.008491e-01 -0.005445273 0.140310086 0.0262233667 -0.065410717
## X204977_at -1.342263e-01 0.057580196 0.148846872 -0.0207482940 -0.232862406
## X205019_s_at 7.111158e-02 -0.049603298 0.011879802 0.0153158117 0.046285303
## X205086_s_at 2.120526e-01 -0.213811030 -0.232271520 0.1788436306 0.233540481
## X205298_s_at -4.144297e-02 -0.151093553 0.078813496 -0.0866606411 0.059039442
## X205306_x_at 1.306397e-03 -0.104923501 0.238559123 -0.0948489915 -0.028622780
## X205392_s_at -4.220483e-02 -0.036980700 0.019959113 0.1309903247 0.113940720
## X205440_s_at 2.992127e-02 -0.051515175 -0.021996163 -0.0900338808 -0.033454147
## X205531_s_at 5.465048e-03 0.067732112 0.059124737 0.1958760143 -0.019651811
## X205554_s_at -8.457786e-03 -0.120608685 0.001401097 0.0588033655 -0.046151829
## X205740_s_at 2.650439e-01 0.052741187 0.040540230 -0.1482159939 0.174792745
## X205819_at -3.964308e-02 0.010224847 -0.045183526 -0.0584433119 -0.089331242
## X205858_at 1.474610e-02 0.099221650 0.058580134 0.0370669855 0.143257895
## X205866_at 4.306752e-02 -0.020740426 -0.060507899 -0.0479231887 -0.080300128
## X205890_s_at -3.892532e-02 -0.114252738 0.140734060 0.1705534909 0.012666051
## X205911_at 8.993259e-02 -0.017692207 0.073561963 -0.0110199280 0.136120650
## X206380_s_at -1.394063e-02 -0.063006305 -0.019321522 -0.0095170555 -0.094094346
## X206453_s_at 7.546335e-02 0.038585770 -0.029726229 0.1464022069 0.005336018
## X206643_at -1.469229e-01 0.124087764 -0.085212066 0.0258298488 -0.021041418
## X206680_at -1.308345e-02 -0.192319510 0.050999476 0.1234297347 -0.126917740
## X207076_s_at 6.036436e-02 -0.060303243 0.154700181 0.1209160807 -0.095637877
## X207218_at 8.266412e-02 0.033396486 0.072439181 -0.0514096540 0.021469773
## X207262_at -7.736937e-03 -0.018485712 -0.034752825 -0.0288469029 -0.068632265
## X207330_at 2.214170e-01 0.077772203 0.009858897 0.1783589312 -0.193810910
## X207609_s_at 6.265782e-02 -0.069119949 0.029324081 -0.0355831992 -0.046573242
## X207804_s_at -4.220829e-02 0.028810699 -0.068260103 0.0109444261 -0.034638491
## X207828_s_at 3.019967e-02 -0.036052972 0.075998751 0.0182596560 -0.017071009
## X207995_s_at -8.460411e-02 0.095194917 -0.097270979 0.0107558385 -0.084880876
## X208079_s_at -9.322895e-02 -0.041391632 0.209273787 -0.0013939154 -0.056995537
## X208147_s_at 5.822277e-02 0.070549940 -0.098291071 -0.0038615965 -0.023596982
## X208816_x_at 1.248588e-01 0.194833981 -0.047377608 -0.0215437190 0.146601533
## X209189_at 1.290581e-02 -0.042649028 0.023300172 -0.0420511982 0.056610343
## X209219_at 1.346504e-01 -0.114421251 -0.078567619 -0.0041409729 -0.016122592
## X209335_at 5.648018e-02 -0.045310757 -0.036009208 0.0514556583 0.085820652
## X209365_s_at 3.354617e-02 -0.036652416 -0.021007086 -0.0086999719 -0.002485199
## X209447_at 3.389511e-02 -0.023339231 0.134767892 -0.0149614709 0.235233585
## X209458_x_at -3.985177e-02 0.002272318 0.004191399 0.0188747564 0.026636384
## X209821_at 5.571627e-02 0.057640318 0.001291418 -0.2073126817 0.018854830
## X209825_s_at -7.292469e-02 -0.049039072 0.013037725 -0.0996956978 -0.016555291
## X210095_s_at -1.001797e-01 0.051908616 -0.159711822 -0.1596807105 -0.007509644
## X210481_s_at -3.807627e-02 0.079189788 -0.039974599 0.0684074513 0.001313223
## X210909_x_at 1.216364e-02 0.038879833 0.139308835 -0.0262037885 0.066988707
## X211023_at -4.400055e-02 -0.096150060 -0.310804488 -0.0402614484 0.323407549
## X211378_x_at 9.861684e-03 0.072891460 -0.078354251 0.0397966073 -0.032050605
## X211628_x_at 3.181984e-01 0.096044763 0.007177173 -0.0913902153 -0.013280396
## X211699_x_at -4.361899e-02 0.022843892 -0.018172747 0.0152536373 0.003862838
## X211745_x_at -2.886056e-02 0.004318953 0.004664322 0.0235805026 0.013879463
## X211765_x_at 1.019633e-02 0.081722525 -0.069445234 0.0453927884 -0.021483330
## X211978_x_at 2.201582e-02 0.083016557 -0.069905038 0.0240597757 -0.026356523
## X212149_at -1.175232e-01 -0.201878048 -0.125912227 0.1601250743 0.065404499
## X212551_at 2.217343e-01 0.106756821 -0.104268315 -0.0038596052 0.002630563
## X212554_at 1.461377e-01 0.058075163 -0.077088532 0.0070225495 0.046134381
## X212661_x_at 3.507705e-02 0.072702524 -0.069225994 0.0429134814 -0.007817894
## X213068_at 7.065057e-02 -0.057028350 0.089806214 0.1538638323 0.081276506
## X213629_x_at 1.838313e-01 0.104729543 0.017185371 0.1777367158 0.073997869
## X214414_x_at -3.039635e-02 -0.033910049 -0.012102419 0.0002156941 -0.013221391
## X214421_x_at -3.811266e-02 0.024249744 -0.051684112 -0.0896588534 -0.030164589
## X214710_s_at 3.209174e-02 0.015057375 0.083216292 0.0226756902 0.011250614
## X215138_s_at -1.124453e-01 0.182318869 -0.017994589 0.0602657413 0.206180956
## X215330_at -6.218056e-02 -0.032612504 0.153727395 -0.1530341596 0.095675423
## X215768_at -2.250785e-02 -0.076043424 -0.032057605 0.2294459565 -0.078165236
## X216025_x_at -4.744894e-02 0.014743841 -0.043726546 -0.0906619840 -0.029765787
## X216661_x_at -2.750864e-02 0.024839107 -0.050098766 -0.0979064154 -0.045172349
## X216782_at 1.613404e-01 -0.304462136 -0.011559074 0.0188467642 -0.279952918
## X217165_x_at 1.742473e-01 0.071765928 0.058720332 0.1913474049 0.067712935
## X217319_x_at 6.629484e-02 -0.069997053 -0.067279398 0.0584423401 -0.033543400
## X217414_x_at -4.164854e-02 -0.003242127 -0.005023218 0.0104096455 0.011425584
## X217521_at -1.276600e-01 0.055254209 -0.059250875 0.0293212154 0.016750535
## X218002_s_at 3.236576e-02 -0.072263533 -0.030756633 -0.0591896710 0.036017890
## X218061_at 9.910980e-02 -0.226497280 -0.219474527 -0.0001040459 -0.114641084
## X219485_s_at -5.189650e-02 0.031015943 0.116927871 -0.0558010009 0.027725312
## X219787_s_at 4.343967e-02 0.084102211 0.111852497 0.0218167366 0.014336268
## X220017_x_at -4.917248e-02 0.017327092 -0.044046405 -0.0885761900 -0.033552000
## X220114_s_at -2.139025e-02 0.032782886 -0.049692381 0.0777780714 0.001800326
## X220116_at -6.583635e-02 0.014963802 -0.010891726 -0.0886597110 0.027966387
## X220148_at 1.192398e-01 0.134363019 0.100562415 -0.0365767837 0.084837864
## X220491_at 5.942523e-02 -0.115127374 -0.031156809 0.0247032205 -0.047362227
## X220496_at -3.911854e-05 -0.007656982 -0.085604352 -0.0809047947 -0.078455032
## X36829_at -8.092053e-02 -0.015192526 0.130278116 -0.0859745151 0.141224236
## PC23 PC24 PC25 PC26
## X200606_at 0.0217998495 -0.0205612361 0.0281306079 -0.065097720
## X200734_s_at -0.0960165892 -0.1214612464 0.0136573340 -0.041778999
## X200882_s_at -0.0572403831 -0.2404155255 -0.0931668811 -0.076353473
## X200910_at -0.0809109362 -0.0566320623 -0.0800133781 -0.049678723
## X200954_at -0.0457005393 0.2236930625 -0.1648837685 -0.167245140
## X201128_s_at 0.0014345838 0.0200581960 0.0004869874 -0.044827453
## X201184_s_at -0.1892994281 0.2400173359 -0.0662389794 -0.121886704
## X201293_x_at 0.0718592722 -0.0253115684 0.0349705148 0.023090537
## X201398_s_at -0.2859347812 0.0675114909 0.0667761201 0.121473969
## X201441_at 0.1085024347 -0.1148042136 0.1903950069 0.001077618
## X201453_x_at -0.0118323992 0.0316534388 0.0810570804 -0.014491096
## X201516_at 0.1619401793 0.0173375261 -0.2386464773 0.077186255
## X201527_at 0.0099137149 -0.0841564023 0.0409958208 0.226398038
## X201531_at 0.1416189631 -0.0329221782 0.1207770959 -0.001874702
## X201577_at 0.0477961318 0.0145890899 -0.1656556291 0.095601756
## X201584_s_at -0.0877532382 -0.0272099354 -0.0703543962 -0.011388716
## X201656_at -0.0153702095 0.1182555001 0.0002976980 -0.194260254
## X202541_at 0.2043914111 -0.1721963157 0.0626826844 0.085727967
## X202737_s_at -0.0526028707 -0.0541627814 -0.0552620342 0.062053672
## X202861_at 0.0684261500 -0.1538674021 -0.0158779460 -0.112547597
## X202940_at 0.0112840034 -0.1985344174 -0.0350084828 0.303966839
## X202963_at 0.1109337217 -0.0743954018 -0.0029386257 0.024654312
## X203316_s_at -0.0960996225 0.0173294732 -0.1100462544 -0.057143239
## X203554_x_at 0.0157073738 0.0832025579 0.0308598017 0.113916653
## X203755_at -0.0651264139 0.0823357339 -0.0501640087 0.032114746
## X204018_x_at 0.0098247344 -0.0023904877 -0.0081023209 0.024570024
## X204301_at 0.1732464216 0.1790731076 -0.2384624085 0.118253654
## X204428_s_at -0.0399035488 -0.0568536607 0.0146677073 -0.019008581
## X204641_at -0.0992957349 0.0618673871 0.0176684797 -0.057206537
## X204977_at 0.0383966075 0.0278107847 -0.3767293691 -0.049924808
## X205019_s_at -0.0374868004 -0.0988018618 -0.0690510689 -0.060391447
## X205086_s_at -0.1360435695 0.1439929583 -0.0754436260 -0.218440094
## X205298_s_at 0.3087697297 -0.0434309861 -0.1245922308 -0.096547666
## X205306_x_at -0.0012486952 0.0964809999 -0.0588257677 -0.041561111
## X205392_s_at -0.0400262218 -0.0056066491 0.0543825750 -0.048553795
## X205440_s_at -0.0279044156 -0.0843591433 -0.0259964919 0.087123486
## X205531_s_at -0.1050566365 -0.0396997815 0.0100409222 0.045292935
## X205554_s_at 0.0083972571 0.0520421345 0.0546990154 0.058091152
## X205740_s_at 0.0223464096 -0.1263891568 0.1117814598 -0.025156150
## X205819_at 0.0392327858 0.0110240023 0.0450588704 -0.061612278
## X205858_at -0.0270483912 -0.0522429292 -0.1398098583 0.037670061
## X205866_at -0.0139901576 0.0085092151 -0.0304775082 -0.007463401
## X205890_s_at -0.0613898160 0.0671685756 0.1025625834 -0.118656222
## X205911_at -0.0353941825 -0.1635359485 -0.1444864575 -0.070000333
## X206380_s_at 0.0280580112 0.0027556458 0.1045913676 -0.073615294
## X206453_s_at -0.0796681975 -0.1483497672 -0.0241693833 -0.030428827
## X206643_at 0.0650955794 -0.0015460138 -0.1117399590 0.079490310
## X206680_at 0.0711428887 -0.0376457574 0.1120484932 0.035273882
## X207076_s_at 0.0501724708 -0.0399259127 -0.0155379095 0.056135456
## X207218_at 0.0628620721 0.0965482281 -0.0399051616 -0.139320994
## X207262_at 0.0118716505 0.0225042606 -0.1376315224 0.022063320
## X207330_at 0.3266955968 0.0864544920 0.0833275294 -0.289330884
## X207609_s_at 0.0258842849 -0.0629446010 -0.0725871245 -0.011019723
## X207804_s_at 0.0006506916 0.0243266346 0.0789966716 -0.062818490
## X207828_s_at -0.0453305872 0.0679644343 0.0032256552 -0.007315610
## X207995_s_at -0.0355948404 -0.0705071018 0.0844154374 -0.102940670
## X208079_s_at 0.0445863704 -0.0698910592 0.1147624066 0.052453069
## X208147_s_at -0.0303001527 -0.0809932839 -0.0713461041 0.078860604
## X208816_x_at -0.0609693177 0.1379670460 -0.2092225283 -0.016892530
## X209189_at -0.0256341096 0.0034591052 0.0289396774 0.073053770
## X209219_at 0.0540043745 -0.0177653616 -0.0873123376 0.053218156
## X209335_at -0.1404370167 -0.0584304518 -0.1486834471 0.051152797
## X209365_s_at -0.0939947526 -0.0987710127 -0.0673454181 -0.038327811
## X209447_at -0.0605681777 0.0538759382 0.0063627143 0.002010377
## X209458_x_at 0.0081924466 -0.0009556093 -0.0166000053 0.012627988
## X209821_at 0.0450030610 0.2766542532 0.1264365260 0.213317855
## X209825_s_at -0.0607946809 0.0679134367 -0.0422073292 -0.115942297
## X210095_s_at -0.0358571884 -0.1296071606 0.0017674582 -0.202700382
## X210481_s_at -0.0114101318 -0.1038389482 -0.0027925173 -0.121265429
## X210909_x_at -0.2201804233 0.0307297136 0.1109901968 0.035058741
## X211023_at 0.1818513819 -0.0132417809 0.1404383439 -0.181810078
## X211378_x_at 0.0722074134 -0.0304431293 0.0375667907 0.013378083
## X211628_x_at -0.1403267733 -0.1470148837 0.0544307389 -0.108007329
## X211699_x_at 0.0044169343 -0.0109030323 0.0081193940 0.029927553
## X211745_x_at -0.0037570730 -0.0022211666 0.0131974817 0.009885080
## X211765_x_at 0.0683863137 -0.0322061271 0.0352376194 0.021531288
## X211978_x_at 0.0525853849 -0.0545982091 0.0444479479 0.033150464
## X212149_at -0.0880979004 -0.0533195262 0.1784137480 0.169453433
## X212551_at 0.0012238698 -0.0047840859 -0.1196173732 0.068848396
## X212554_at 0.0736624736 0.0029569579 -0.0944829487 0.047019240
## X212661_x_at 0.0749830680 -0.0213584709 0.0495607973 0.013418684
## X213068_at -0.0231186500 -0.1124160940 -0.1334467421 -0.043756815
## X213629_x_at -0.0713796845 0.1324338011 0.0074673761 0.166696876
## X214414_x_at -0.0049467573 -0.0266487004 -0.0153088777 0.006710104
## X214421_x_at -0.0502520886 -0.0017053841 0.0004034762 0.045874297
## X214710_s_at -0.0676894910 0.0802355775 0.0110559926 0.121018057
## X215138_s_at 0.3397500407 0.0598062073 -0.0852773097 0.177690693
## X215330_at 0.1211283540 0.3670845469 0.2078027926 0.049785774
## X215768_at 0.1019866196 -0.0223787324 -0.1758321040 -0.097019564
## X216025_x_at -0.0517400104 -0.0036256893 -0.0091342529 0.042181046
## X216661_x_at -0.0550237715 0.0190140318 -0.0098961063 0.029994124
## X216782_at 0.0503422994 0.1506964859 0.1517565072 -0.005180683
## X217165_x_at -0.0481582998 0.1325580420 0.0046413184 0.137245108
## X217319_x_at 0.0228649161 -0.0148396646 -0.0487851897 0.064540001
## X217414_x_at 0.0001574614 -0.0226643563 -0.0152256474 0.013496983
## X217521_at 0.0866963315 0.0138831287 -0.0533813568 0.053839717
## X218002_s_at -0.0337039416 -0.0522353168 -0.0251093061 -0.020416239
## X218061_at 0.1134999827 0.0318015852 -0.0045602405 0.028116145
## X219485_s_at 0.0701311867 -0.0123100349 0.0125291036 0.067303063
## X219787_s_at -0.0822086747 0.0220710769 -0.0284903497 -0.003485285
## X220017_x_at -0.0514534854 0.0064140142 -0.0145375431 0.035118951
## X220114_s_at 0.0187522999 -0.0645593848 0.0344314399 -0.044936606
## X220116_at -0.0728734960 0.1250732007 -0.0449789764 0.035964004
## X220148_at 0.0489398930 0.1602453032 -0.0714571004 -0.165028400
## X220491_at -0.0120800470 0.0559494511 -0.1819410880 0.212832920
## X220496_at -0.0519872178 0.0102347523 0.0684125242 0.002748443
## X36829_at 0.0687747184 -0.0220609412 -0.0219425868 -0.075594800
## PC27 PC28 PC29 PC30 PC31
## X200606_at 0.085512274 -0.241761876 0.042376009 -0.1256625497 1.085917e-01
## X200734_s_at 0.081104747 0.076179229 0.183667470 -0.0151370746 -1.107673e-01
## X200882_s_at 0.110020458 -0.025946652 0.255525246 -0.0559193214 -1.545243e-01
## X200910_at 0.019773637 -0.072030155 0.104165773 -0.0119602636 -1.122474e-01
## X200954_at 0.092112849 0.160847898 -0.092433006 0.1910566894 2.125197e-01
## X201128_s_at -0.064003922 0.027672700 -0.075713335 0.0765854247 1.529049e-01
## X201184_s_at -0.051823293 0.116108896 -0.074762112 0.0139083011 -5.405344e-02
## X201293_x_at -0.003434045 0.064625384 0.042236392 -0.0625549010 -7.873388e-03
## X201398_s_at -0.099837778 -0.186783537 -0.027392865 -0.1391901553 2.431913e-02
## X201441_at -0.066266959 -0.350744292 -0.029371369 -0.0169917835 -6.209625e-02
## X201453_x_at -0.149225323 -0.139739898 -0.003534623 0.2058924483 1.325188e-01
## X201516_at 0.030547884 -0.080480325 -0.111367010 -0.0804611383 -3.513275e-01
## X201527_at -0.242533971 -0.111519025 -0.131732654 0.0789772864 9.394058e-02
## X201531_at 0.018615369 -0.041222005 -0.022339636 0.0685450610 1.690960e-01
## X201577_at 0.054588660 0.002798158 -0.003794313 0.0417255436 -7.734106e-02
## X201584_s_at -0.114346746 0.012313065 0.006382312 -0.0182480841 2.993188e-02
## X201656_at 0.122711335 -0.083645169 0.086804339 -0.0364432302 6.704744e-03
## X202541_at -0.001867093 0.026891900 -0.043473914 0.1269425921 -2.026561e-01
## X202737_s_at 0.167960891 -0.153865834 -0.181244872 0.0259736165 4.634397e-02
## X202861_at 0.089185333 0.126984370 0.053013701 -0.1091874570 3.118162e-03
## X202940_at 0.011939231 0.046497210 0.170958417 0.2205771898 3.912625e-02
## X202963_at -0.099076030 0.072479341 0.158684374 0.1488675225 -1.760858e-02
## X203316_s_at 0.062442189 0.003388319 0.031305998 -0.0147236765 2.948682e-02
## X203554_x_at -0.037177699 0.057983373 -0.035971211 0.0171135858 4.631245e-02
## X203755_at 0.010180277 0.050891841 -0.072464845 0.0552903115 3.165133e-02
## X204018_x_at 0.004288568 -0.026544964 -0.003662258 0.0028641448 -2.884317e-02
## X204301_at -0.304798794 -0.098937807 0.263014462 0.2870422756 -1.744759e-02
## X204428_s_at -0.040814992 -0.036917745 0.034060153 -0.0901587096 9.980961e-03
## X204641_at 0.048772219 0.057163372 -0.017682895 0.0586083296 4.822923e-02
## X204977_at -0.330376642 0.048693083 0.002189511 -0.3744883862 3.025675e-02
## X205019_s_at -0.088981984 -0.012693224 -0.028372303 0.0478633734 4.782405e-02
## X205086_s_at 0.036699846 0.044718397 0.340910941 -0.1677639312 -1.744724e-03
## X205298_s_at -0.135849760 0.020936599 -0.087209773 0.0391018377 1.050255e-01
## X205306_x_at -0.061296325 -0.159265728 0.196481448 0.0766436191 2.515974e-02
## X205392_s_at -0.039876826 0.059009676 -0.098148979 -0.0396121216 2.166184e-02
## X205440_s_at 0.023760597 0.097611058 0.017443329 -0.0127879336 3.982540e-02
## X205531_s_at -0.002740745 0.212964724 0.097315388 0.0255449382 4.851124e-03
## X205554_s_at 0.033226332 -0.032193649 0.007867974 -0.0754471452 3.805978e-02
## X205740_s_at -0.190840053 -0.204323305 -0.047074109 -0.3602674555 -9.461616e-02
## X205819_at -0.028704215 0.008817439 0.107446515 0.0093205256 7.240766e-02
## X205858_at 0.132620063 0.070925224 -0.081892743 -0.1005377720 -1.472739e-01
## X205866_at 0.022669728 -0.032747565 0.041222599 -0.0096736933 5.491603e-02
## X205890_s_at 0.187084735 -0.224997392 -0.051628629 0.1513047801 -8.521376e-02
## X205911_at -0.037257465 0.006695796 -0.130956102 -0.0505507920 -1.307665e-01
## X206380_s_at -0.130335935 0.039144767 0.062074955 0.0516961081 6.135503e-02
## X206453_s_at 0.033080498 0.039339564 0.088734608 -0.0280973105 8.398368e-02
## X206643_at -0.071490677 0.024718311 0.002135368 -0.0105457047 1.082919e-02
## X206680_at -0.045610742 0.067784551 -0.020739440 -0.0250014824 1.287160e-01
## X207076_s_at 0.089400542 0.096926691 0.072666905 0.0615720609 -2.771142e-02
## X207218_at 0.004986903 -0.201413228 0.006084613 -0.0368415484 -3.344184e-02
## X207262_at 0.006146662 0.005254340 0.055563360 -0.0420545056 -1.349410e-02
## X207330_at -0.090675263 0.095423086 0.173066734 -0.0351305462 -1.149890e-01
## X207609_s_at 0.093306593 -0.018825457 0.034173833 0.0245616645 2.285056e-02
## X207804_s_at 0.027216290 -0.036735102 -0.041575790 0.0137544978 -5.836224e-02
## X207828_s_at 0.064967038 0.018529227 -0.059788353 0.0981267892 6.852408e-02
## X207995_s_at -0.035360611 0.003656403 -0.182131535 0.0509929319 -2.187736e-01
## X208079_s_at 0.069311277 0.107841466 0.078270302 -0.0642659034 8.445390e-02
## X208147_s_at 0.153637571 0.038562183 0.027934522 0.0628790356 -2.872764e-02
## X208816_x_at -0.020832192 -0.036350389 -0.036463736 0.0259021096 -8.406126e-02
## X209189_at 0.055322129 -0.033307436 -0.013825696 0.0079634153 4.230335e-02
## X209219_at -0.013158658 0.077972982 -0.063199447 0.0100296305 1.194535e-01
## X209335_at 0.056169108 -0.069311919 0.071984453 -0.0187817902 5.082951e-02
## X209365_s_at -0.033277231 -0.041203158 0.010411460 0.0182535014 2.158231e-02
## X209447_at -0.188014588 0.051942671 -0.168372710 -0.0532159432 3.552558e-02
## X209458_x_at -0.003818329 -0.020188340 -0.012671546 0.0123704375 4.268611e-03
## X209821_at 0.117167779 0.193297301 0.044690857 -0.2254943013 3.499257e-02
## X209825_s_at 0.068937110 0.031928509 -0.015131435 0.0563950500 -1.065084e-02
## X210095_s_at -0.030640812 -0.238889075 0.127920465 0.1232027481 1.599836e-01
## X210481_s_at -0.064970244 -0.041395393 -0.125056495 0.1144517895 -1.906616e-01
## X210909_x_at 0.103444076 0.031940536 -0.103351072 0.0037307939 -5.329654e-02
## X211023_at 0.042589795 0.189819584 -0.071587932 0.0100269624 4.449512e-02
## X211378_x_at -0.007068688 0.046227248 0.062127268 -0.0482839579 -2.203741e-02
## X211628_x_at -0.214226730 0.105927901 -0.122571626 0.0299097533 2.022217e-01
## X211699_x_at 0.026691168 -0.020346944 0.008109634 -0.0074729209 -1.213786e-02
## X211745_x_at -0.003817549 -0.018821651 -0.009262384 0.0161731909 -3.656685e-03
## X211765_x_at -0.008241708 0.054140858 0.041037500 -0.0500857948 -1.656402e-02
## X211978_x_at 0.017005824 0.066917744 0.036218129 -0.0646106646 -4.327504e-02
## X212149_at 0.024097308 -0.017507786 0.129381845 0.0176167702 2.934370e-03
## X212551_at 0.056847924 0.066322866 -0.059206775 0.1889286987 -1.513951e-01
## X212554_at 0.082464842 0.023268644 -0.017776264 0.1967371913 -8.178341e-02
## X212661_x_at -0.010714657 0.061126399 0.024952999 -0.0710541548 -1.585347e-02
## X213068_at 0.039836107 0.052175858 -0.012982219 0.0162330984 9.288824e-02
## X213629_x_at -0.051383397 -0.039476374 0.081080632 -0.0569009887 -2.241478e-03
## X214414_x_at 0.005948113 -0.009965296 -0.007493760 0.0115201648 -1.016937e-02
## X214421_x_at -0.072695472 0.057119876 -0.052432634 0.0037594953 -2.475159e-02
## X214710_s_at -0.005326192 0.012066501 -0.106618848 0.0138502145 1.803823e-05
## X215138_s_at 0.209536752 -0.127496206 -0.090254490 -0.1819498127 1.848806e-01
## X215330_at 0.080513819 -0.032421743 0.106367513 0.0269188553 -1.950313e-01
## X215768_at 0.251898971 -0.062943126 -0.286482471 -0.0441164592 1.086630e-01
## X216025_x_at -0.099829218 0.050920338 -0.042587066 0.0006386540 -2.243570e-02
## X216661_x_at -0.076970712 0.036242494 -0.072408468 0.0221575595 -1.789388e-02
## X216782_at -0.176425557 0.047571293 -0.179478010 -0.0266758281 -2.055724e-01
## X217165_x_at -0.056867242 -0.041989141 0.095563652 -0.0738584227 3.506571e-02
## X217319_x_at 0.019893673 -0.022305190 0.001620065 -0.1132096893 7.070417e-02
## X217414_x_at 0.018192885 -0.027288487 -0.006919997 -0.0219900018 -1.440583e-02
## X217521_at -0.069491535 0.057647136 -0.028171208 0.0644713704 -1.589016e-02
## X218002_s_at -0.017470120 -0.085845818 0.059327348 0.0325911431 7.128690e-02
## X218061_at 0.055137710 -0.045174631 -0.053470442 -0.0720990352 2.938480e-01
## X219485_s_at 0.013412841 -0.079599614 0.090314496 -0.0511269822 7.314089e-02
## X219787_s_at -0.021196516 0.007980278 0.004565040 -0.0197626596 4.499843e-02
## X220017_x_at -0.096614368 0.051453010 -0.046041112 0.0007793118 -3.090315e-02
## X220114_s_at 0.020248660 -0.012223489 -0.094813848 0.0161583894 -6.717947e-02
## X220116_at -0.109766222 -0.094635383 -0.028249266 0.0473884730 -9.250712e-02
## X220148_at 0.033657342 -0.206823278 -0.049964376 0.1016184915 6.263236e-02
## X220491_at 0.131786591 -0.151733044 0.034414103 -0.0338263789 2.079697e-02
## X220496_at 0.024254091 -0.061696327 0.029847898 -0.0316070069 2.271243e-02
## X36829_at 0.015137613 0.137450549 -0.002672226 -0.0654498840 8.153900e-02
## PC32 PC33 PC34 PC35
## X200606_at 0.115033634 -0.1792532979 0.0814181762 -0.010375266
## X200734_s_at 0.235091781 -0.0554529847 0.1297496328 -0.066954771
## X200882_s_at -0.134040973 -0.0956918672 0.0213127444 0.216281536
## X200910_at -0.111431099 -0.0654431030 -0.0010041287 0.146440458
## X200954_at -0.066851101 0.0898036466 0.0047083692 -0.003730613
## X201128_s_at 0.154197038 0.0423731546 0.0127720077 0.006307616
## X201184_s_at -0.229241178 0.0801377256 -0.1653071293 0.138399888
## X201293_x_at 0.034943591 -0.0661028891 -0.0094271275 0.061728783
## X201398_s_at -0.031533507 -0.1276052496 -0.1447564461 0.028783617
## X201441_at -0.218830296 -0.0886236213 0.0898448767 -0.084820591
## X201453_x_at 0.124316555 0.0633656836 -0.2660942736 -0.039027875
## X201516_at 0.126787865 0.0750975243 -0.0226729151 0.112908436
## X201527_at 0.154290557 0.0079157296 0.1097084118 0.112742261
## X201531_at 0.006935207 0.0774202703 -0.1710845632 -0.128508789
## X201577_at 0.013897264 -0.0558555536 -0.0265787501 0.011863605
## X201584_s_at 0.057446033 -0.1282911945 0.1990052284 -0.020927936
## X201656_at -0.283847478 0.0165525003 0.0269138495 0.056639818
## X202541_at -0.079097992 0.4742422502 0.1487419460 0.033797138
## X202737_s_at -0.132664035 0.0950100939 -0.1260669498 -0.167049821
## X202861_at -0.089794628 -0.0606861473 -0.1320995073 -0.009817166
## X202940_at 0.162726926 -0.0677231862 -0.1008705345 -0.033235756
## X202963_at -0.082980903 0.0824317679 -0.0724348323 0.072466814
## X203316_s_at -0.027794632 -0.0713061653 -0.0679752885 0.054539750
## X203554_x_at -0.018543955 -0.0556669256 0.0592377589 -0.122857313
## X203755_at -0.048838754 -0.0164982993 -0.0375147755 -0.135145229
## X204018_x_at -0.046598992 -0.0190757824 -0.0007620891 0.007695317
## X204301_at -0.158393450 -0.1303944988 0.1180702222 -0.049764589
## X204428_s_at -0.063576554 -0.0366553557 -0.0589996693 -0.064792286
## X204641_at -0.083250271 -0.0220124702 0.0187924941 -0.108122862
## X204977_at 0.034653343 0.2138901337 -0.0167576638 -0.155870359
## X205019_s_at 0.018384304 -0.0126856327 -0.0411757509 -0.006031921
## X205086_s_at 0.227590238 0.2962692280 0.0921862149 -0.114455657
## X205298_s_at -0.158359082 -0.2337647022 0.0294483393 0.010564829
## X205306_x_at 0.130296041 0.0676167856 -0.0268462939 0.128549078
## X205392_s_at 0.097271136 -0.1005227630 0.0470127962 -0.063257804
## X205440_s_at -0.071158238 0.0236201966 0.0893163672 0.154194675
## X205531_s_at -0.104252809 0.0866719967 -0.0910484788 -0.006433255
## X205554_s_at -0.037052907 -0.0293875438 -0.0002647440 -0.048822809
## X205740_s_at -0.122245371 0.1150134877 -0.0951906690 -0.058535510
## X205819_at -0.016035813 0.1039321421 -0.1809326613 -0.045617783
## X205858_at 0.040920410 -0.1574738562 -0.1456260815 0.054468080
## X205866_at -0.059471007 0.0227841357 0.0468400266 -0.025805332
## X205890_s_at 0.060416006 0.0701583642 0.0958923989 0.073503376
## X205911_at 0.005649317 -0.0479585613 0.0437790992 0.090314271
## X206380_s_at 0.057298196 0.0973713918 0.0142756753 0.041783970
## X206453_s_at 0.068589760 -0.1253700006 0.1077680138 -0.035025437
## X206643_at -0.026560669 0.0660669838 0.0124249326 0.009112857
## X206680_at -0.009150313 0.0185130590 0.0270725631 -0.052809822
## X207076_s_at -0.084927424 0.0427632140 0.0709769284 0.077764151
## X207218_at -0.098697280 0.0080227702 0.0321123201 -0.094803748
## X207262_at 0.041318989 0.0300112422 -0.0883854967 -0.016315089
## X207330_at 0.125384208 -0.2838418064 -0.1179080649 -0.037337331
## X207609_s_at 0.072566873 -0.0091198709 0.0404277939 0.058794224
## X207804_s_at 0.005610209 0.0292351748 0.0303136642 0.014911456
## X207828_s_at -0.054744637 -0.0003836596 -0.0238387266 -0.084551475
## X207995_s_at -0.004628760 -0.0003318620 -0.0163290708 -0.040873546
## X208079_s_at -0.176269116 -0.0180054990 -0.0635414045 -0.041959686
## X208147_s_at -0.113637132 0.0380039813 -0.0943805858 -0.186447726
## X208816_x_at -0.006988900 -0.0292440194 0.0598741235 -0.145170862
## X209189_at 0.010361220 0.1067798401 -0.1135798639 -0.078863165
## X209219_at 0.022222898 -0.0788569954 0.0224678914 0.083002040
## X209335_at -0.040261069 -0.0472863582 0.0344478546 -0.184714765
## X209365_s_at -0.065585152 -0.0131161460 -0.0058729284 -0.011227783
## X209447_at 0.094253649 -0.1174531389 -0.0061511686 0.010162824
## X209458_x_at -0.021381484 -0.0245569888 -0.0068170831 0.018464780
## X209821_at -0.115981716 0.0102365897 0.0937037682 0.124719303
## X209825_s_at -0.051206798 -0.0092818365 -0.0762259974 0.130689776
## X210095_s_at -0.025779904 0.1364632662 -0.0273441995 0.252176608
## X210481_s_at -0.038819118 -0.0338934533 -0.0375514612 -0.147882603
## X210909_x_at 0.198827297 -0.0652491759 -0.0571832302 0.089405897
## X211023_at -0.076657103 -0.0666853132 0.0065919994 -0.071573236
## X211378_x_at 0.033166554 -0.0537309811 0.0024101623 0.043299608
## X211628_x_at -0.110939716 0.0497390183 0.3361569883 0.229786661
## X211699_x_at -0.032027261 -0.0136661941 0.0051852634 -0.006941112
## X211745_x_at -0.027043503 -0.0115436683 -0.0058766072 0.015228794
## X211765_x_at 0.037784359 -0.0711787045 0.0113120498 0.066497500
## X211978_x_at 0.025017005 -0.0601104346 0.0175583092 0.051313078
## X212149_at -0.133450009 -0.0411998005 0.0211415383 -0.081392630
## X212551_at 0.027873152 -0.0166086149 -0.1295227978 0.046749584
## X212554_at -0.034493702 -0.0126376613 -0.1045807672 -0.004120174
## X212661_x_at 0.022939190 -0.0593404406 0.0117926492 0.061181376
## X213068_at 0.075973895 0.0422670841 0.0095317339 -0.062049063
## X213629_x_at -0.097375448 -0.0157280971 -0.1254548178 0.266548166
## X214414_x_at -0.048592331 0.0111942450 0.0525615765 0.006236819
## X214421_x_at 0.020586423 0.0462960967 0.0570568378 0.033702616
## X214710_s_at 0.040166327 -0.1229746939 0.0592895681 -0.102505517
## X215138_s_at 0.011632055 0.1977354445 -0.0393354917 0.111430921
## X215330_at 0.094047311 -0.0068436772 0.3190896724 -0.071149912
## X215768_at 0.117722003 -0.0524155684 0.1351927195 0.215898388
## X216025_x_at 0.021924125 0.0615550386 0.0575583077 0.034539364
## X216661_x_at 0.024477951 0.0579183346 0.0449158461 0.041847752
## X216782_at 0.049382564 0.0410388743 -0.1787639311 0.085568580
## X217165_x_at -0.079973768 -0.0380458078 -0.1097876024 0.270586408
## X217319_x_at -0.038658630 -0.0096998168 0.0275989670 -0.167909893
## X217414_x_at -0.032757168 -0.0060619351 0.0171845438 0.010802006
## X217521_at -0.050761550 0.0284782071 0.0218351692 0.011578904
## X218002_s_at 0.009675759 -0.0088548437 0.0531103945 -0.032767255
## X218061_at -0.011282486 -0.0661048294 -0.0153752804 0.064765966
## X219485_s_at 0.269779985 -0.0069864389 -0.2742549735 0.055971376
## X219787_s_at -0.014399330 0.0240647993 -0.0010440212 -0.102986815
## X220017_x_at 0.013709896 0.0474523655 0.0620067583 0.028689238
## X220114_s_at -0.057890689 0.0456851117 0.0167882171 -0.066702033
## X220116_at -0.110923421 -0.1625102560 -0.0577917744 0.056961964
## X220148_at 0.091149557 -0.0168572500 -0.0269519613 0.047319371
## X220491_at -0.071994519 -0.0684835179 0.1734237072 -0.109525453
## X220496_at -0.006735148 0.0643007896 -0.0276797035 0.032288465
## X36829_at -0.069373957 -0.0918526035 -0.0925701862 0.001474212
## PC36 PC37 PC38 PC39
## X200606_at -0.0104898251 -3.066994e-02 1.621312e-02 0.054131833
## X200734_s_at 0.1585182375 -3.216270e-02 7.683524e-02 0.108329499
## X200882_s_at 0.1515109047 5.412699e-02 3.513161e-02 -0.105355850
## X200910_at 0.0515411470 -5.461562e-02 4.841292e-02 -0.056710862
## X200954_at 0.1045722295 -5.067938e-02 -1.737245e-01 -0.003965709
## X201128_s_at 0.1440430104 2.459753e-02 3.240286e-02 0.059209281
## X201184_s_at -0.1314778380 -1.558035e-01 7.045518e-02 0.041660058
## X201293_x_at -0.0414757314 -4.617616e-02 4.248615e-02 0.017060696
## X201398_s_at 0.0800260019 1.041011e-01 -7.492495e-02 -0.026505036
## X201441_at 0.0742861700 -9.740175e-02 -6.236872e-02 -0.003776889
## X201453_x_at 0.1255524257 1.957307e-02 6.749456e-04 -0.079505168
## X201516_at 0.0106887720 3.345836e-02 -5.329474e-02 -0.032199340
## X201527_at 0.1420492014 2.487487e-01 -4.576224e-02 -0.127448438
## X201531_at 0.1460728795 7.142649e-03 1.335545e-01 0.202557499
## X201577_at -0.1357948674 5.608873e-02 6.708620e-02 0.047574403
## X201584_s_at -0.0017106000 6.152717e-02 2.154792e-02 0.178830356
## X201656_at 0.1671872789 7.937197e-02 1.438045e-01 0.046752724
## X202541_at 0.0137765886 7.907753e-02 8.158038e-03 0.177984711
## X202737_s_at -0.1477444038 1.120899e-01 4.012981e-01 -0.200093373
## X202861_at -0.0390315705 1.725947e-01 -7.775511e-02 0.049872584
## X202940_at 0.1022603951 6.778208e-02 4.772724e-02 -0.054081398
## X202963_at -0.0491128318 5.083635e-02 3.102090e-03 -0.074008340
## X203316_s_at 0.0442581176 2.270956e-02 -2.664740e-02 -0.181463768
## X203554_x_at 0.0009523025 -1.714274e-02 -2.186796e-02 -0.018662677
## X203755_at 0.0247197686 -2.873805e-02 -2.720925e-02 -0.012746152
## X204018_x_at -0.0223079574 -3.822233e-03 -2.464293e-05 0.002224887
## X204301_at -0.0516152106 1.289603e-01 2.773659e-01 0.013632107
## X204428_s_at 0.1110955064 -8.601065e-02 2.625716e-02 -0.016593687
## X204641_at 0.1710855091 -6.803304e-02 -5.569840e-02 -0.034890643
## X204977_at 0.0097089320 -1.069782e-01 2.353864e-02 -0.026260010
## X205019_s_at 0.0074378911 -6.087863e-02 3.090821e-02 0.027940302
## X205086_s_at 0.0604128760 9.197268e-02 1.720550e-02 0.082734233
## X205298_s_at 0.0558424054 -1.732630e-01 9.588357e-02 -0.033185030
## X205306_x_at 0.0344415518 -1.720834e-01 -3.969798e-02 0.105022354
## X205392_s_at 0.1287844152 4.298117e-02 5.538405e-02 -0.010034912
## X205440_s_at 0.0826159765 -2.193582e-01 -8.640967e-03 -0.046613916
## X205531_s_at -0.0732012866 -9.741172e-02 1.377868e-02 -0.094238956
## X205554_s_at 0.0770319083 1.197611e-02 4.995374e-03 0.028815377
## X205740_s_at -0.0845408248 -1.644486e-01 -1.009164e-01 -0.024810006
## X205819_at -0.2329834549 8.590407e-02 -1.285546e-01 -0.121460557
## X205858_at -0.1008868034 2.039147e-01 8.968952e-02 -0.021514909
## X205866_at -0.0456792698 5.198741e-02 -1.211704e-01 0.030659527
## X205890_s_at -0.3064474411 -1.990796e-02 1.154764e-01 0.151026901
## X205911_at 0.0127443490 2.692227e-02 9.523494e-02 0.057904301
## X206380_s_at -0.2042261050 5.245362e-02 -2.114563e-02 0.047839031
## X206453_s_at 0.0417444154 -1.590798e-01 1.512317e-01 -0.048604408
## X206643_at 0.0508896660 -9.477404e-04 3.166133e-02 -0.034767655
## X206680_at -0.0663702943 2.438010e-02 -5.693479e-02 -0.009343037
## X207076_s_at 0.0639976568 5.982770e-03 1.398316e-02 0.046254788
## X207218_at 0.0616832240 2.432464e-01 4.003122e-02 0.006467343
## X207262_at 0.0782260559 -1.416744e-01 1.085621e-01 -0.083072727
## X207330_at -0.0464130845 -5.548521e-02 4.094268e-02 -0.009395482
## X207609_s_at 0.0054170112 -5.122508e-02 -6.896148e-03 0.056410094
## X207804_s_at 0.0991105208 8.513211e-02 2.187189e-02 -0.020955024
## X207828_s_at 0.0906232564 -3.205254e-02 -2.481703e-02 -0.033094701
## X207995_s_at 0.1429708931 -2.850312e-02 4.314529e-02 -0.001528892
## X208079_s_at -0.0156282362 5.768936e-02 -9.504992e-02 0.041299832
## X208147_s_at -0.2071287954 1.083613e-01 9.961144e-02 -0.103485178
## X208816_x_at 0.0168925841 2.982592e-02 -3.946686e-02 -0.018222389
## X209189_at 0.1757977141 -1.250785e-01 1.926868e-01 0.174757357
## X209219_at -0.0799659957 -7.822328e-02 2.307441e-02 0.074996534
## X209335_at 0.0264075923 -7.538284e-03 -1.040519e-01 0.000820376
## X209365_s_at 0.0448783936 -4.698422e-02 -1.845690e-02 -0.004134682
## X209447_at -0.1694548548 -2.094086e-01 1.872902e-01 0.199709046
## X209458_x_at -0.0383303312 -6.951779e-04 -1.710427e-02 0.003558284
## X209821_at 0.0907556825 1.185208e-01 1.044881e-01 0.236987836
## X209825_s_at 0.1223283206 7.047960e-03 2.374719e-01 0.052625614
## X210095_s_at -0.1167560611 -9.689061e-02 -4.321747e-02 -0.017531582
## X210481_s_at 0.1199697611 1.106185e-02 -2.094058e-02 0.085378568
## X210909_x_at -0.1387296515 -1.645553e-01 2.269857e-01 -0.075774823
## X211023_at 0.0230153296 -3.511279e-03 -1.594383e-01 -0.080635208
## X211378_x_at -0.0416099041 -3.336021e-02 1.193120e-02 0.024557288
## X211628_x_at -0.1641712952 9.119772e-02 7.173435e-02 -0.097217045
## X211699_x_at -0.0120457301 -4.624447e-03 -2.327070e-02 -0.006368916
## X211745_x_at -0.0328418942 -2.486495e-02 -8.903242e-03 0.025812015
## X211765_x_at -0.0440081132 -5.021488e-02 4.785407e-02 0.024869357
## X211978_x_at -0.0192640449 5.774834e-05 2.105269e-02 0.015713200
## X212149_at 0.0431557381 -2.531958e-01 -3.378157e-02 0.076892941
## X212551_at -0.0396832588 -1.770212e-01 -1.774687e-01 0.108305032
## X212554_at -0.0053716991 -1.815088e-01 -1.287388e-01 0.047671695
## X212661_x_at -0.0595481732 -2.608005e-02 4.666832e-02 0.038943754
## X213068_at 0.0770234166 -6.524984e-02 -6.085705e-02 -0.350160678
## X213629_x_at 0.1064920527 4.532581e-02 -4.361753e-02 -0.070160039
## X214414_x_at 0.0034233230 -2.837170e-02 1.728083e-02 -0.001874808
## X214421_x_at 0.0061830272 9.787369e-03 -8.613334e-03 -0.012500395
## X214710_s_at -0.0073350831 2.957865e-03 -1.012720e-01 0.029926028
## X215138_s_at 0.0433179862 -2.289199e-01 6.484910e-02 -0.108822742
## X215330_at -0.0587892012 -1.064756e-01 2.689695e-03 -0.457560196
## X215768_at 0.0661682618 7.803911e-02 -1.567814e-01 -0.037585726
## X216025_x_at 0.0105327706 -5.107353e-03 -1.229732e-02 -0.026553642
## X216661_x_at 0.0042963674 1.357929e-02 3.778620e-04 -0.010544111
## X216782_at 0.1462374211 9.947406e-02 7.058878e-02 -0.004251782
## X217165_x_at 0.1445546150 5.195962e-02 -4.525850e-02 -0.053145661
## X217319_x_at -0.1078376894 3.020582e-02 9.134577e-02 -0.085133293
## X217414_x_at -0.0216211793 -1.674723e-04 5.147600e-03 0.001453144
## X217521_at -0.0020383536 -2.928077e-02 -1.520227e-02 0.051961193
## X218002_s_at -0.0334978468 1.034542e-02 -3.096830e-02 0.050714464
## X218061_at -0.0027812245 6.321057e-02 1.455502e-01 0.023424428
## X219485_s_at -0.1249827628 7.692215e-02 -9.876139e-02 0.025107815
## X219787_s_at -0.0187031865 1.743404e-02 -1.520081e-02 0.014407121
## X220017_x_at 0.0088192739 2.870603e-04 -2.146955e-02 -0.028279996
## X220114_s_at 0.1312668037 -1.610407e-02 -3.418411e-02 -0.023061894
## X220116_at -0.1562712258 -2.081831e-02 -2.340095e-01 0.034653247
## X220148_at 0.0617965859 3.430757e-02 -3.383669e-02 0.055901883
## X220491_at -0.0914691160 -1.628507e-02 -1.929322e-01 0.260005585
## X220496_at -0.0546507786 4.017630e-02 -2.232114e-02 0.025059292
## X36829_at -0.0619605322 2.284015e-01 -9.563200e-02 0.086284281
## PC40 PC41 PC42 PC43
## X200606_at -0.1315319870 -0.0428727484 -7.298489e-02 0.1669954902
## X200734_s_at -0.0739807079 -0.0653540007 4.823190e-02 -0.1019855719
## X200882_s_at 0.0727092258 -0.2305702836 2.824916e-02 -0.0634179767
## X200910_at -0.0636592348 -0.1201179673 -1.241653e-02 -0.1255376830
## X200954_at 0.0278473222 -0.0361771539 2.211598e-01 -0.0690281144
## X201128_s_at 0.1161370826 -0.0462480900 1.429529e-01 0.0383154289
## X201184_s_at -0.0534816401 -0.1655607035 -6.507261e-02 0.0981878367
## X201293_x_at 0.0466887106 -0.0127694269 1.069630e-03 -0.0253839836
## X201398_s_at 0.0862995558 -0.0246355095 -4.469761e-02 -0.0805556833
## X201441_at -0.2854117942 0.0659794529 9.409868e-02 0.0339109907
## X201453_x_at -0.0155647147 -0.1254922816 6.260696e-02 0.0487616878
## X201516_at -0.0658906517 -0.0288920099 5.558012e-02 0.2084195980
## X201527_at 0.1371633004 -0.0433293137 -2.100298e-01 -0.0233099690
## X201531_at -0.2422120875 -0.1020404173 3.579467e-02 -0.0073746784
## X201577_at -0.1146093234 0.0420750979 -1.590876e-01 -0.0526822873
## X201584_s_at 0.0160828377 -0.0451431552 -3.556344e-03 -0.0760937566
## X201656_at -0.0077136612 -0.0080213649 -1.301572e-02 -0.2219472707
## X202541_at 0.0044972984 -0.1175190825 3.862274e-02 -0.1340678685
## X202737_s_at 0.1230995595 -0.0035417728 -1.383152e-01 0.0264188507
## X202861_at 0.0228634654 0.1435791898 -1.275586e-01 -0.0505167264
## X202940_at -0.0525385754 0.0371805795 -7.109597e-02 -0.0714163151
## X202963_at 0.0959063128 -0.2022533164 -4.055637e-02 -0.0841577346
## X203316_s_at -0.1231895771 -0.0307686964 2.694791e-02 -0.1474265072
## X203554_x_at -0.0343788297 0.0037417666 -1.821560e-02 0.0420864565
## X203755_at 0.1226938432 0.0315811992 -2.969956e-02 0.1203412660
## X204018_x_at 0.0260156154 -0.0015209843 -2.536729e-02 -0.0020624388
## X204301_at -0.1614451186 0.2115373017 1.609728e-01 0.0379291302
## X204428_s_at 0.0088946382 -0.0884749133 2.005791e-02 -0.0399594240
## X204641_at -0.0380004331 -0.0668684881 1.085275e-01 0.0383496233
## X204977_at 0.0918754467 0.0909083459 -4.882058e-02 -0.0252210998
## X205019_s_at 0.0138079239 -0.1031885715 -9.102418e-03 0.0181292667
## X205086_s_at -0.1345059484 0.1055694093 -1.187845e-01 0.0011781655
## X205298_s_at -0.0878862405 -0.0146536084 -9.358847e-02 0.0697697817
## X205306_x_at 0.2132379836 0.1478326451 -1.236522e-01 0.2260477313
## X205392_s_at 0.0697862770 0.0650759862 5.465774e-02 -0.0025817598
## X205440_s_at -0.0753304649 0.3286608332 -1.205902e-01 -0.1599462800
## X205531_s_at -0.0277103725 0.0644631813 -1.073453e-01 -0.0153816816
## X205554_s_at 0.1453974270 -0.0358456993 -4.053712e-02 -0.0043176194
## X205740_s_at -0.0316246058 0.0183416818 1.354664e-01 0.0022636063
## X205819_at -0.1798882408 0.0401104846 1.002268e-01 -0.0601312227
## X205858_at -0.0479201026 0.0700262066 3.713335e-01 0.2607349002
## X205866_at -0.0067731861 -0.1050107907 2.571141e-02 0.0053311185
## X205890_s_at -0.0869885418 0.1882660551 4.299502e-02 -0.0548646162
## X205911_at 0.0715750220 -0.0381756964 6.925522e-02 0.0371419576
## X206380_s_at -0.0569004764 -0.1469294465 -9.095060e-02 0.0434728624
## X206453_s_at 0.0538703934 -0.1082175944 6.886824e-02 0.1606921204
## X206643_at -0.0057994866 -0.1200576086 5.823334e-02 -0.0786842631
## X206680_at -0.1235078176 -0.0780486071 1.151585e-01 -0.1257325312
## X207076_s_at 0.0738987010 0.0584366636 -5.745692e-02 0.1744202358
## X207218_at 0.1201174419 -0.0570358733 -1.082463e-01 -0.0062997980
## X207262_at -0.1197950995 -0.0100106337 2.087211e-01 -0.0926070680
## X207330_at 0.0638977661 -0.0640940752 -1.174316e-01 -0.1087901070
## X207609_s_at 0.0035902207 -0.1627366427 -4.381404e-02 0.0932748336
## X207804_s_at 0.0986356990 0.0000349787 -5.066308e-02 0.0361255141
## X207828_s_at -0.0343022871 -0.0227561813 4.778363e-02 0.0049229212
## X207995_s_at 0.0766477785 0.2543743390 -4.041418e-02 -0.0484385222
## X208079_s_at 0.0327089785 0.1433292020 -6.420197e-02 0.0788418232
## X208147_s_at 0.1217093900 -0.0706422853 4.864339e-02 0.0429950886
## X208816_x_at -0.1091344906 -0.0275944784 -1.439781e-01 -0.0802780725
## X209189_at -0.2015708963 -0.0417235435 -1.370889e-01 0.0204942616
## X209219_at 0.0175790334 -0.0058556895 -3.458885e-02 -0.0342270686
## X209335_at -0.0509677460 -0.1036549909 -8.515536e-02 -0.0669443484
## X209365_s_at 0.0265150575 -0.1429070498 -1.581695e-02 0.0340114700
## X209447_at 0.1477794568 -0.0996624407 1.014860e-01 -0.1352652738
## X209458_x_at 0.0214776099 0.0192069492 -3.906295e-02 0.0034887843
## X209821_at -0.0028078849 -0.0562528342 -2.815031e-02 0.2357355743
## X209825_s_at -0.0114585507 0.0784206444 -1.500269e-01 -0.0053071702
## X210095_s_at 0.2276656078 0.1319993727 1.646405e-01 0.0465728872
## X210481_s_at 0.0966613830 0.1736673107 -9.149440e-03 -0.1470081630
## X210909_x_at -0.0968545463 -0.0294130881 -8.645831e-02 -0.2659998660
## X211023_at 0.0308999679 -0.0282751373 3.287443e-02 -0.0607963808
## X211378_x_at 0.0298141872 -0.0083926680 7.834332e-03 -0.0162857101
## X211628_x_at -0.0994965915 0.0092192004 -7.341663e-02 0.0468952462
## X211699_x_at -0.0086128640 0.0050424373 -3.497213e-02 -0.0009047064
## X211745_x_at -0.0007441566 -0.0090612818 1.428592e-02 -0.0067589238
## X211765_x_at 0.0452250660 -0.0087671072 8.256508e-04 -0.0164403874
## X211978_x_at 0.0470620799 -0.0179662407 -7.117049e-03 0.0075585923
## X212149_at 0.0058702767 0.1534305049 -2.837720e-03 0.1412404550
## X212551_at 0.1211612872 -0.0286855988 -5.613026e-02 0.0183964200
## X212554_at 0.0761609660 -0.0018684507 -2.730734e-02 0.0118466676
## X212661_x_at 0.0464758341 -0.0031716140 1.281562e-02 -0.0208402214
## X213068_at -0.0734601759 0.1673732327 -1.232292e-01 0.0627210640
## X213629_x_at -0.0003651268 0.0454421550 9.598347e-02 -0.0548393609
## X214414_x_at 0.0291443647 -0.0121090195 -9.990267e-04 0.0372238268
## X214421_x_at -0.0850147408 0.0413541548 -1.737556e-05 -0.0053716565
## X214710_s_at -0.0443433018 0.0234152152 1.586647e-02 0.0677718580
## X215138_s_at 0.0172601491 -0.0548821499 -1.334142e-01 -0.0523332146
## X215330_at 0.1322369911 -0.0693259400 4.577827e-02 -0.0595589442
## X215768_at -0.2335271266 -0.0229696355 3.538693e-02 -0.0147655629
## X216025_x_at -0.0935423881 0.0388702945 -2.359769e-03 -0.0048928581
## X216661_x_at -0.0707157655 0.0285762492 -2.776784e-02 -0.0080240183
## X216782_at -0.0133452250 -0.0451361329 6.007085e-03 -0.0963760902
## X217165_x_at -0.0026022569 0.0670060376 1.189833e-01 -0.0691028697
## X217319_x_at 0.0687270209 -0.0585889454 1.652630e-02 0.0001030449
## X217414_x_at 0.0195080165 0.0051052982 -3.744116e-03 0.0236993132
## X217521_at -0.0527343322 -0.0846515923 4.485606e-02 -0.0825423173
## X218002_s_at 0.0141152988 -0.2261529458 -4.670324e-02 0.1041209234
## X218061_at 0.2024567845 0.1182716012 2.696454e-02 -0.1777847340
## X219485_s_at -0.0529940305 0.0782496955 1.921914e-02 -0.0882681552
## X219787_s_at 0.0937738698 0.0307485807 1.561406e-01 0.0674516194
## X220017_x_at -0.0857422421 0.0185339155 6.286929e-03 -0.0131090462
## X220114_s_at 0.1086669533 0.0108648467 -1.202846e-01 0.0701373907
## X220116_at -0.1320610612 -0.1193393309 -3.311152e-01 0.0404861130
## X220148_at 0.0614797747 0.0347071867 -8.575891e-02 0.0482891087
## X220491_at 0.1813886807 0.0088396606 9.314152e-02 -0.3747382535
## X220496_at -0.0039659298 -0.1367022948 -9.176292e-02 -0.0070407912
## X36829_at -0.0084203010 0.1432735297 -1.163674e-01 -0.0545750706
## PC44 PC45 PC46 PC47
## X200606_at -0.0403829199 -0.0352386033 -0.2061670818 0.0499237577
## X200734_s_at 0.0804620021 -0.0390663456 0.0763055365 -0.0930208121
## X200882_s_at 0.1061831702 -0.0579451075 0.0434844591 -0.0383259647
## X200910_at 0.0020883116 -0.1055675234 -0.1263025142 0.0785349308
## X200954_at -0.0539117414 -0.0226936829 -0.0935647391 -0.0297924164
## X201128_s_at -0.0659662679 -0.1679421908 -0.0029514119 0.0258928702
## X201184_s_at 0.1026488417 0.1091653999 -0.0644718103 0.0010443896
## X201293_x_at 0.0444763580 -0.0590726665 0.0136093343 0.0026810511
## X201398_s_at 0.3454591086 -0.0217830563 -0.0879885452 -0.1973839892
## X201441_at -0.0952492741 -0.0327767961 -0.2818458949 0.0953120797
## X201453_x_at 0.0036169064 0.1767217889 0.1738656399 -0.0919508992
## X201516_at -0.1423391939 0.1143235312 -0.1377003842 -0.1900013644
## X201527_at -0.2026813216 0.0709135794 0.0325220652 0.0025134098
## X201531_at 0.0598156633 0.0128804879 0.0411052029 0.1106609877
## X201577_at -0.0827022851 0.2040626752 -0.0630748602 0.1654159912
## X201584_s_at -0.1318171403 0.0286100449 0.0696321665 -0.0005529353
## X201656_at -0.2619449671 0.3428754222 0.1613444313 -0.2247714031
## X202541_at 0.1559104190 0.0425010244 -0.0228637142 0.0747405249
## X202737_s_at -0.0825428162 -0.1350303243 -0.0994104131 -0.0011038971
## X202861_at -0.0551464326 -0.1219905580 -0.0944742779 -0.1317730769
## X202940_at 0.0750792289 -0.0124474611 -0.0462141615 0.0147633440
## X202963_at -0.0853205118 -0.1107432318 -0.0886212405 0.1086839863
## X203316_s_at 0.1478347115 0.0249273080 -0.0922320463 0.1010106556
## X203554_x_at -0.0812019698 0.1245896664 0.0259044720 -0.0313566416
## X203755_at 0.0586304286 -0.0035752316 0.0212198794 -0.0945397568
## X204018_x_at -0.0269456925 -0.0051039297 0.0084739015 0.0309244833
## X204301_at 0.0848917031 -0.2006091560 0.1151321440 -0.1051221778
## X204428_s_at 0.0653891383 -0.0578033227 0.1287800995 -0.0118878374
## X204641_at 0.0267375541 -0.0848890111 -0.1645285983 0.0239583381
## X204977_at -0.0763103166 0.0441269488 0.0590952326 0.0674533411
## X205019_s_at -0.0451210308 0.0160959140 -0.0527115305 -0.0409096534
## X205086_s_at -0.0257302273 -0.0018194774 -0.2135286641 0.0492732421
## X205298_s_at -0.0061161502 0.0307191204 -0.0830970428 0.1066410723
## X205306_x_at 0.0840086361 -0.0360790647 0.1146869513 0.1345930702
## X205392_s_at -0.1025245628 0.0387473858 -0.0816783515 -0.0105135898
## X205440_s_at 0.0822516400 0.1779427346 -0.2013392742 -0.0950152143
## X205531_s_at 0.0712292141 0.0951197793 0.0294224030 0.1860872147
## X205554_s_at -0.0023789622 0.0247726833 0.0400206771 -0.0697542506
## X205740_s_at 0.0252811530 -0.1644631926 0.2975689827 -0.0098914477
## X205819_at -0.0199335365 -0.0922242602 0.0247168666 -0.1242376836
## X205858_at 0.1257117035 0.2895629764 0.0649698714 0.2841009481
## X205866_at 0.0204731353 0.0267913365 -0.0246720332 0.0565104214
## X205890_s_at 0.0642655534 -0.1187548980 0.1622234577 -0.1663669854
## X205911_at -0.0374122518 0.0379198109 -0.0516970501 -0.1080383596
## X206380_s_at -0.0321957210 -0.0045493696 -0.1083706438 -0.0175908889
## X206453_s_at -0.0136387353 0.1184729645 -0.0032433523 -0.2853729469
## X206643_at -0.0965115114 0.0667335237 0.0461843432 -0.0825898106
## X206680_at 0.0536433855 0.0541299979 0.0262134241 -0.2657583415
## X207076_s_at 0.2292918018 0.0737086588 0.1242980215 -0.0764329299
## X207218_at 0.1185537175 0.1718414245 -0.1038670730 -0.1071900497
## X207262_at -0.1031335550 -0.0624639578 0.0333458561 -0.0871902401
## X207330_at -0.0726339183 0.0844331320 0.0356127857 0.0388646581
## X207609_s_at -0.0253533358 -0.0154873854 0.0499431425 0.0060987179
## X207804_s_at -0.0147038693 -0.1217853143 -0.0720195730 0.0652396405
## X207828_s_at -0.0287089257 -0.0294627133 0.0609544494 0.0024933363
## X207995_s_at 0.1508370774 0.0017356568 -0.0356279083 -0.0265382524
## X208079_s_at -0.0965954601 0.0795138554 0.0478915266 0.0419860408
## X208147_s_at -0.1216498461 -0.0219221609 -0.1500698833 0.0081704437
## X208816_x_at 0.1302132039 -0.0279393339 0.1640468680 0.1080662468
## X209189_at 0.1599693655 0.1329043275 -0.0373299618 -0.0300692658
## X209219_at 0.1138205730 0.1197109523 0.0081577650 -0.1749995524
## X209335_at 0.0576116344 0.0355586938 0.0801670007 0.1287965107
## X209365_s_at 0.0048577841 0.0334110421 0.0426001779 0.0637930182
## X209447_at 0.1111319397 -0.1179147602 -0.3049742384 0.0022665642
## X209458_x_at -0.0005368741 -0.0018391596 0.0004926883 0.0368810094
## X209821_at -0.1194346229 -0.1677956546 0.0534030928 -0.0482701357
## X209825_s_at -0.0202387429 -0.2383494058 0.0909296372 -0.0146703780
## X210095_s_at -0.1026416147 0.1698053851 0.0332697197 0.0021359105
## X210481_s_at 0.0303016586 0.0168746771 -0.0243909282 0.0265496343
## X210909_x_at -0.2878346287 0.0177279796 0.1599316036 0.0901601098
## X211023_at 0.0940198931 -0.0336544145 0.0221384223 0.0907195424
## X211378_x_at 0.0463213596 -0.0494646772 0.0287823219 -0.0048003291
## X211628_x_at 0.0851159902 0.0517058217 -0.0413973298 -0.0243185420
## X211699_x_at 0.0037556095 0.0056722406 0.0202948566 0.0093872231
## X211745_x_at -0.0076453914 0.0112201772 0.0015585234 -0.0121708932
## X211765_x_at 0.0327471604 -0.0655892317 -0.0017605811 -0.0006104133
## X211978_x_at 0.0456603044 -0.0030931388 0.0381778692 -0.0020762529
## X212149_at -0.2435845267 0.0927956730 0.0066069442 0.0816816925
## X212551_at -0.0612584261 -0.1010429180 -0.0204489805 -0.0816678160
## X212554_at -0.0210560398 -0.0693869480 -0.0034626034 -0.0745883374
## X212661_x_at 0.0281213027 -0.0605403774 0.0062982170 0.0006527326
## X213068_at -0.0662671527 -0.1863579978 0.0527329942 -0.1158730425
## X213629_x_at -0.0505730709 -0.0931011727 -0.0874747678 0.0450781215
## X214414_x_at -0.0022495919 -0.0078385287 -0.0034762339 -0.0176545292
## X214421_x_at -0.0082193184 -0.0032128095 0.0155412366 0.0544722318
## X214710_s_at 0.0242619489 0.1116928861 0.0008201186 -0.1151197589
## X215138_s_at 0.1210790572 0.0009181257 -0.0791149196 -0.1265026235
## X215330_at 0.1258077028 0.0942453942 -0.0326355060 0.0217896019
## X215768_at 0.0034695936 -0.1386034849 0.1813314824 0.0780212555
## X216025_x_at -0.0101272362 0.0105774526 0.0034700512 0.0579272934
## X216661_x_at 0.0059345668 -0.0039199436 -0.0272961084 0.0529607506
## X216782_at -0.0351894747 -0.0090218087 0.0112027743 -0.0031157492
## X217165_x_at -0.0911226139 -0.0708315680 -0.0940411734 0.0551579098
## X217319_x_at 0.0222813693 -0.0761576549 0.0756762906 -0.0581958536
## X217414_x_at 0.0093515539 0.0009388235 0.0100681055 0.0178413569
## X217521_at -0.0831070963 0.0842563310 -0.0038088242 -0.0669189833
## X218002_s_at 0.0511201469 -0.0491136184 -0.0239198357 0.0253978574
## X218061_at 0.1806005578 0.0870711870 0.1376178551 0.2681499013
## X219485_s_at 0.0667220700 0.1101774176 -0.1127488757 -0.0911447805
## X219787_s_at -0.0003858909 -0.0260716630 -0.1051175055 -0.0406159403
## X220017_x_at 0.0147319432 -0.0021671956 0.0140317837 0.0427519520
## X220114_s_at -0.0629496896 -0.0808655481 0.0700767647 0.0221211039
## X220116_at 0.0289804479 0.0069637752 0.1409191375 -0.0659760536
## X220148_at -0.0300203403 0.0053888155 -0.1123323767 0.0723221037
## X220491_at -0.0731712939 -0.0279493978 -0.0243048468 0.0641241026
## X220496_at -0.0710233688 0.0007611625 -0.0121510474 0.0906316129
## X36829_at -0.0162649824 -0.0789879242 -0.0637821677 -0.1666211094
## PC48 PC49 PC50 PC51
## X200606_at 6.410259e-04 4.517437e-02 -0.1331701569 -0.001484450
## X200734_s_at -6.135872e-02 4.182932e-02 0.0629278089 -0.015163172
## X200882_s_at -5.560409e-02 -7.472128e-02 -0.0268960016 0.103831511
## X200910_at -6.656951e-02 -1.087429e-02 0.0681750405 0.113222275
## X200954_at -6.091790e-02 1.512198e-02 -0.0683178268 -0.036487762
## X201128_s_at 6.160834e-02 -1.146805e-01 -0.1471121740 -0.272559841
## X201184_s_at 5.292406e-02 -1.293106e-01 0.0633888376 0.072633318
## X201293_x_at 2.916080e-02 -4.547335e-02 -0.0517198139 0.001860148
## X201398_s_at 2.439417e-01 9.310063e-02 0.0468342892 -0.087299068
## X201441_at 2.609646e-02 -1.769394e-02 -0.0096496377 0.013588000
## X201453_x_at -2.001891e-01 -1.533930e-01 -0.3743265530 0.044418029
## X201516_at 2.270307e-01 7.929330e-02 -0.1979539580 0.002662443
## X201527_at -1.727703e-02 -7.360962e-02 0.2782075453 0.092495517
## X201531_at -1.426968e-02 1.038000e-02 0.0409061694 0.019260067
## X201577_at 3.423800e-02 2.094894e-01 -0.0008554103 0.151443891
## X201584_s_at -1.394418e-01 2.183810e-01 0.0766736868 -0.181565866
## X201656_at 1.354638e-01 2.034699e-01 0.0724119723 0.102531803
## X202541_at 1.938446e-01 -7.876621e-02 0.0586304573 0.037319279
## X202737_s_at -1.145387e-01 1.137721e-01 -0.0462849104 -0.061766728
## X202861_at 1.439940e-01 -1.368191e-03 -0.0043754623 0.047425777
## X202940_at 5.067804e-02 -6.390302e-02 -0.1440292171 0.064047773
## X202963_at 5.610667e-02 1.754134e-01 -0.1326211194 -0.205630117
## X203316_s_at -6.710545e-02 1.046281e-02 0.0133880815 0.027115347
## X203554_x_at -1.321740e-03 6.919650e-02 0.0138447198 0.020799860
## X203755_at 9.046014e-02 3.356117e-03 0.0091505864 0.069316350
## X204018_x_at -2.419113e-03 -1.031022e-03 0.0225214599 -0.012797498
## X204301_at 1.128163e-01 -4.774167e-05 0.0701461962 0.024569485
## X204428_s_at 2.003272e-01 -1.422385e-01 0.0290849718 -0.130549169
## X204641_at 1.072442e-01 -3.766145e-02 -0.0155476847 -0.030702554
## X204977_at -1.022157e-01 -1.271087e-01 0.0124978356 -0.033317225
## X205019_s_at -2.902927e-02 8.148055e-02 -0.0621707092 0.021450426
## X205086_s_at -9.991839e-05 -7.897112e-02 -0.0530838527 -0.031143606
## X205298_s_at 4.269356e-02 -1.431054e-01 -0.0449049699 -0.051518590
## X205306_x_at 1.254166e-01 3.019952e-02 0.2047347353 0.100212114
## X205392_s_at 2.609311e-01 -5.518188e-02 -0.0595851429 0.184572673
## X205440_s_at -2.504918e-02 4.584834e-02 -0.0130823018 -0.350743853
## X205531_s_at 1.647555e-02 1.091282e-01 -0.1915441749 0.137205526
## X205554_s_at 1.505635e-01 -4.697961e-02 -0.0681884994 0.142738704
## X205740_s_at 7.839564e-04 1.285388e-01 0.0260099873 -0.042631530
## X205819_at -3.947512e-02 8.795467e-02 0.2465961753 -0.018534724
## X205858_at 5.089009e-02 -1.602578e-01 0.1301105471 -0.105442116
## X205866_at 4.722847e-02 -6.747968e-02 0.0269396622 0.090910343
## X205890_s_at -1.010772e-01 -1.247682e-01 -0.1722561183 -0.087441050
## X205911_at -6.090460e-02 -2.230316e-02 -0.0229502927 -0.168544525
## X206380_s_at 8.976886e-02 1.288270e-01 0.1585315000 -0.244739512
## X206453_s_at -6.487171e-02 7.233408e-02 0.0743373898 -0.078832545
## X206643_at -5.567795e-02 -5.378816e-02 -0.0126205199 -0.046643441
## X206680_at 9.312771e-02 4.934541e-02 -0.0155517605 0.084844364
## X207076_s_at -1.426148e-01 1.971540e-01 -0.0925106816 -0.015452017
## X207218_at -1.232332e-01 -1.527065e-01 0.0292653346 -0.100093322
## X207262_at 1.702345e-02 3.227523e-02 -0.0247235477 0.141110138
## X207330_at -1.160466e-03 -7.709520e-02 -0.0328898860 0.019260258
## X207609_s_at -9.958702e-02 1.049802e-01 0.0894489393 -0.098073306
## X207804_s_at -4.005692e-02 4.982454e-02 -0.0545351399 0.150287821
## X207828_s_at 6.856604e-03 -1.704823e-02 0.1183517024 -0.038076243
## X207995_s_at -1.405705e-01 -2.251216e-02 -0.0165425513 -0.056123413
## X208079_s_at -8.776455e-04 -8.944430e-02 0.0039262949 0.017454234
## X208147_s_at -1.235120e-01 -1.112322e-01 0.1045332314 -0.012994880
## X208816_x_at -5.010210e-02 2.575639e-01 -0.1545631000 0.043028321
## X209189_at 8.757739e-02 -9.757475e-02 0.1494610487 0.002349852
## X209219_at -2.489185e-01 -5.875850e-02 0.0949650504 0.038017484
## X209335_at 6.086094e-02 -8.508767e-02 -0.0145532723 -0.024211766
## X209365_s_at 3.204367e-02 5.836122e-03 0.0146809068 -0.029892194
## X209447_at -5.458795e-02 1.888359e-01 0.0141023396 0.307826995
## X209458_x_at -1.644401e-02 1.043444e-02 0.0006265369 -0.034198949
## X209821_at -9.056485e-02 -1.709675e-02 -0.1515614846 0.052041803
## X209825_s_at -5.110043e-02 -1.735233e-01 0.2341335342 0.097167388
## X210095_s_at 6.326630e-02 2.602506e-02 -0.1108739047 0.167762002
## X210481_s_at -1.281807e-01 4.482174e-02 -0.0896623042 0.068684442
## X210909_x_at 2.491532e-01 -1.451271e-01 -0.0611766772 -0.144179752
## X211023_at -9.588992e-02 -2.594181e-03 0.1076593577 -0.036292317
## X211378_x_at 3.258382e-03 -6.122286e-02 -0.0554649654 -0.015323977
## X211628_x_at 4.379369e-02 -2.302860e-01 -0.0266280840 0.120868076
## X211699_x_at 5.903403e-04 1.186938e-02 0.0148830112 -0.029364472
## X211745_x_at 1.354634e-02 -7.070079e-03 -0.0101249056 0.010103673
## X211765_x_at 2.262631e-02 -5.983801e-02 -0.0437688508 -0.007120668
## X211978_x_at 5.297185e-02 -5.007713e-02 -0.0390830488 0.030191042
## X212149_at -1.402140e-01 -7.923643e-03 0.0694359556 0.038887282
## X212551_at 1.225484e-01 2.530164e-02 0.1279831429 -0.059269857
## X212554_at 1.019288e-01 6.858545e-03 0.0607614655 -0.013490150
## X212661_x_at 1.941313e-02 -3.603602e-02 -0.0057321237 0.043882342
## X213068_at 3.929765e-02 -4.427889e-02 0.0517771565 0.112220376
## X213629_x_at -1.203047e-01 2.365707e-02 -0.0102975208 -0.098747181
## X214414_x_at -9.736658e-03 -3.369346e-02 -0.0500605014 0.008457500
## X214421_x_at -4.986861e-03 2.214516e-02 -0.0554568059 0.045983873
## X214710_s_at 3.550037e-02 5.258983e-02 0.0808343221 0.037255398
## X215138_s_at -2.757405e-02 -5.587524e-02 -0.0455556916 0.001772633
## X215330_at 5.081549e-03 -1.907804e-02 0.0419185544 0.012520363
## X215768_at -1.289264e-03 8.954153e-02 0.0699098259 0.131057471
## X216025_x_at -2.984936e-03 2.285529e-02 -0.0714913596 0.037244409
## X216661_x_at -1.811118e-02 3.663303e-02 -0.0392869085 0.014218369
## X216782_at -1.109172e-01 -1.282844e-02 0.0671098131 0.017531602
## X217165_x_at -9.393418e-02 3.892362e-02 -0.0187852280 -0.087739015
## X217319_x_at 6.650553e-02 -4.023374e-03 0.0080219156 -0.042308460
## X217414_x_at -1.445635e-02 -2.766172e-03 -0.0097192300 0.014235591
## X217521_at -7.298664e-03 -9.259172e-03 0.0348297248 -0.025851845
## X218002_s_at -2.338569e-02 6.437978e-02 -0.0638736054 0.027951161
## X218061_at 1.708957e-01 1.974619e-01 -0.0612580209 -0.116677044
## X219485_s_at -1.682063e-01 -3.085417e-02 0.1160619922 0.154908037
## X219787_s_at 1.189754e-01 -1.967986e-02 -0.0640484203 0.053208933
## X220017_x_at -9.711895e-03 2.389449e-02 -0.0742963700 0.028100553
## X220114_s_at -4.384510e-02 5.753932e-02 -0.0077039742 0.049757060
## X220116_at -3.058493e-02 -1.658966e-01 -0.1673089757 -0.068285227
## X220148_at 8.941126e-02 9.169906e-03 0.0949198279 -0.134201375
## X220491_at -8.543365e-02 -2.928143e-01 -0.0203924169 0.060500990
## X220496_at -4.156490e-02 6.129616e-02 0.0125983272 0.031397834
## X36829_at 1.217115e-01 8.747095e-03 -0.1638020018 -0.010055196
## PC52 PC53 PC54 PC55 PC56
## X200606_at -0.089547760 0.089007051 0.1343710178 -0.0238823544 -0.023009788
## X200734_s_at -0.026930905 -0.071700932 -0.0303233678 -0.0364126547 0.009693118
## X200882_s_at -0.089715135 0.112179908 -0.0480941674 0.1748865838 0.069057173
## X200910_at 0.022316108 0.043989784 0.0803229368 0.0373286430 0.037396793
## X200954_at 0.125920556 0.173568485 0.0908604975 -0.0090034032 0.061631823
## X201128_s_at -0.050145794 -0.194814499 -0.1547400362 0.2144547954 -0.050830942
## X201184_s_at -0.050742863 0.009520683 0.0429739631 -0.0269017980 0.035918312
## X201293_x_at -0.018030256 -0.005296216 0.0329440707 0.0285828047 0.021369207
## X201398_s_at 0.131483190 -0.028718057 -0.2138011575 -0.1791136970 -0.097527608
## X201441_at 0.022341739 -0.023732548 -0.2981960858 -0.1127216953 -0.058845493
## X201453_x_at -0.161135308 0.022989147 -0.0936261037 -0.1217613412 -0.062830836
## X201516_at 0.013826932 0.147564420 0.1627222162 -0.0505591028 0.024184603
## X201527_at -0.091509552 0.204750557 -0.0552118819 0.1806366609 -0.048598552
## X201531_at -0.053316179 0.033926041 0.1149819979 -0.0378473504 0.009531785
## X201577_at 0.154343467 -0.267481870 -0.1447693875 -0.0353760049 0.043992771
## X201584_s_at -0.031725705 -0.123255223 0.1354735083 -0.1054011960 -0.268681694
## X201656_at -0.100949891 0.039739770 -0.0242746787 0.0274435610 0.094961309
## X202541_at -0.111205812 -0.127096581 0.0451749420 -0.1521550663 -0.055140036
## X202737_s_at -0.271495996 -0.033773248 -0.0826848764 0.1112523225 -0.050967191
## X202861_at -0.075097741 0.031626294 -0.0484496022 0.0771530959 -0.003630611
## X202940_at 0.024013557 0.008774447 0.0321239092 -0.0845038163 0.005197702
## X202963_at 0.139936311 0.217144610 0.0676164649 -0.1690979535 0.153460116
## X203316_s_at 0.064281696 0.075239953 0.0735728586 0.0109258350 -0.046543809
## X203554_x_at 0.083770589 -0.013819544 0.1211500637 0.0321804355 0.044957590
## X203755_at 0.045547558 0.072208963 -0.1217681653 0.0108128949 0.163000977
## X204018_x_at 0.029012380 0.014354696 -0.0065718712 -0.0213977486 -0.023450965
## X204301_at 0.136942727 0.116924380 -0.0022480475 0.1663803209 0.030067649
## X204428_s_at -0.036999829 0.056111163 -0.0845593311 0.0958674768 -0.012852641
## X204641_at -0.160939876 0.032194278 0.0334725328 0.1656891544 -0.043095023
## X204977_at 0.095608491 -0.006830813 -0.1880918155 0.0491680604 -0.006695145
## X205019_s_at 0.071945808 -0.092519675 0.0475576279 -0.0226337399 -0.012986937
## X205086_s_at -0.014526688 0.036497031 -0.0942934184 -0.0007743790 0.003423463
## X205298_s_at 0.020702429 -0.028012745 -0.0848097635 -0.0174894881 -0.145291747
## X205306_x_at -0.238616999 0.234184788 0.0736561296 -0.1682638105 -0.023052258
## X205392_s_at -0.030170313 -0.036316282 0.1206079072 0.0198189839 -0.228412656
## X205440_s_at -0.220391693 0.150574788 0.0975444063 0.0653235387 -0.129370768
## X205531_s_at 0.032690837 -0.045295074 0.0001582438 0.1486791437 -0.228814057
## X205554_s_at -0.027943712 0.038331887 0.0332571909 0.0460319454 0.015974012
## X205740_s_at 0.081337488 0.069813594 0.1049773006 0.0297570151 0.015834116
## X205819_at -0.204107467 -0.098432385 0.0187812236 0.0532673039 -0.062609897
## X205858_at -0.213090199 0.006260132 -0.1478667560 -0.0237092908 0.040226782
## X205866_at 0.068134595 -0.016708457 -0.0803566316 -0.0053261194 -0.009019332
## X205890_s_at 0.116679209 0.034933166 -0.0205984473 0.1417323393 0.041548512
## X205911_at 0.196970742 -0.075610791 0.1037810447 -0.0124646163 0.036548273
## X206380_s_at -0.056980180 0.001804819 -0.0238432227 0.0423758383 -0.075445993
## X206453_s_at 0.092412844 0.048429609 -0.0889742349 -0.0555250597 -0.150755894
## X206643_at -0.054396706 -0.001658428 -0.0160690956 0.0596345113 0.129133229
## X206680_at -0.082460506 0.022479057 -0.1130537316 -0.1046375632 0.094158023
## X207076_s_at 0.053360901 -0.051101602 -0.1568019156 0.1567903337 -0.120483707
## X207218_at 0.023519527 -0.189947930 0.1213513662 0.1598725364 0.054422517
## X207262_at -0.132299716 -0.253575243 0.1949698226 0.0502416934 -0.184916062
## X207330_at -0.008788593 0.043645732 -0.0620263933 -0.0152175967 0.044829000
## X207609_s_at -0.114871699 0.105326673 -0.2348309984 0.1010791988 0.166117715
## X207804_s_at 0.112126537 -0.038557910 -0.0166470109 -0.0033665159 -0.059969126
## X207828_s_at 0.003179916 0.044963363 -0.0029439268 0.0525997202 0.055760272
## X207995_s_at 0.018019681 0.143693537 0.1163422438 -0.0295047728 0.197958014
## X208079_s_at 0.201800210 -0.006356719 -0.0521259778 0.0599045592 -0.086623712
## X208147_s_at 0.122078458 0.239320974 0.0839041584 -0.1539489129 -0.132397373
## X208816_x_at -0.132529229 0.238198939 -0.1392017996 -0.0200191115 -0.191099145
## X209189_at 0.265710376 0.077193717 -0.0391974793 0.1053033120 0.027041500
## X209219_at -0.004564104 -0.028763508 -0.1258300057 -0.3625107963 0.019767262
## X209335_at 0.060491487 -0.049168068 0.1739888853 0.0850552342 0.008013362
## X209365_s_at 0.072151067 -0.069742739 0.0446415034 0.0024218520 0.029128754
## X209447_at -0.150273910 0.024567610 -0.0547512756 0.1122324818 0.172257773
## X209458_x_at 0.024244525 -0.007365433 0.0054608477 0.0095805923 -0.010409633
## X209821_at 0.041489927 0.043858351 -0.0544650227 -0.0430075809 -0.020324517
## X209825_s_at -0.009925057 -0.113929075 0.0711932866 -0.2732544381 -0.190145358
## X210095_s_at 0.101401657 -0.004870195 -0.0592442746 -0.0185632659 -0.196261106
## X210481_s_at 0.031406403 0.040071718 -0.0720817826 -0.0040438976 -0.030071409
## X210909_x_at 0.148241635 0.155292788 -0.1279863785 -0.0246171365 0.016684020
## X211023_at 0.075447913 0.133785477 -0.0113092147 0.0037962489 -0.111211138
## X211378_x_at -0.028456146 -0.027354276 0.0133879904 -0.0013699102 0.014014510
## X211628_x_at 0.026561848 0.027132301 0.0512449978 0.0938856506 0.012204449
## X211699_x_at 0.011839300 0.007451492 -0.0237536864 -0.0099528400 0.060451418
## X211745_x_at 0.005651610 0.016423705 -0.0031825261 -0.0166901415 -0.004328961
## X211765_x_at -0.019350652 -0.027591263 0.0546556200 0.0378816326 0.034868554
## X211978_x_at -0.041437829 -0.010510922 0.0505408542 0.0593371647 0.004568453
## X212149_at -0.087977053 0.020805094 0.0730375444 0.1119962864 0.163315783
## X212551_at 0.031350946 -0.133664705 -0.0932563243 0.2039413130 -0.137258505
## X212554_at 0.033375394 -0.091283400 -0.1311773031 0.0579328678 -0.056906888
## X212661_x_at -0.002133610 -0.045006257 0.0435936658 0.0127382934 -0.003754642
## X213068_at -0.016479721 -0.223135532 -0.0424547156 -0.1394336279 0.326302618
## X213629_x_at 0.046981219 -0.098539345 -0.0283105943 -0.0400800819 0.036985355
## X214414_x_at -0.046358627 -0.001018608 0.0131103719 0.0326627037 -0.009621555
## X214421_x_at -0.015593277 0.022790595 -0.0334316904 0.0008974785 0.020146031
## X214710_s_at 0.021055150 -0.001460009 0.1586992063 0.0669425078 0.007995081
## X215138_s_at 0.014946174 0.055650958 0.0151636447 0.0632300128 -0.066032680
## X215330_at 0.030054280 -0.114073072 -0.0646697555 -0.0075780527 -0.062313252
## X215768_at 0.057038649 0.113869192 -0.0618217098 0.0526116032 -0.085425817
## X216025_x_at -0.019203435 0.023176422 -0.0261824065 -0.0120996457 0.032418967
## X216661_x_at 0.001658273 0.016034645 -0.0374446912 -0.0047548953 0.067947214
## X216782_at 0.025185793 0.089739517 0.0053780927 0.1288528316 -0.183980318
## X217165_x_at 0.037775903 -0.087466515 0.0032063225 -0.0698323414 0.012646882
## X217319_x_at 0.063516906 0.118141276 0.1484431129 -0.1329277586 -0.160076223
## X217414_x_at 0.001759254 0.005085713 0.0088530039 0.0092003366 0.009765649
## X217521_at -0.036448259 0.006939698 -0.0288127999 -0.0447584783 0.080954752
## X218002_s_at 0.087622188 -0.012538026 0.0656955731 0.0897956863 0.027056854
## X218061_at 0.004289506 -0.114825083 0.1556622097 0.0067175819 0.192911787
## X219485_s_at 0.188875426 0.068554106 0.1261589274 0.2323750801 -0.020436486
## X219787_s_at 0.002949893 0.091602840 -0.0040494529 -0.0453711490 -0.036493385
## X220017_x_at -0.021449259 0.012122378 -0.0108975419 -0.0162892302 0.035369713
## X220114_s_at 0.060158650 -0.075998413 0.0634875193 -0.0738390189 0.050684845
## X220116_at -0.180273492 -0.115683673 0.1811836667 -0.0128210125 0.003309751
## X220148_at 0.052804587 -0.085751347 0.0379291948 -0.0469522752 0.084706442
## X220491_at -0.108467736 0.050369983 -0.0778936068 -0.0471736150 -0.045382372
## X220496_at 0.063368694 -0.037391729 -0.1613780659 0.0725861913 0.019008215
## X36829_at -0.102261456 0.035571537 -0.0982404210 -0.0275871079 0.004981938
## PC57 PC58 PC59 PC60
## X200606_at -0.090974893 -3.303732e-02 0.115516195 0.0350583444
## X200734_s_at 0.039297439 -1.455395e-02 0.065682999 0.0180343815
## X200882_s_at 0.024567976 5.965275e-02 0.035197823 -0.0887588029
## X200910_at -0.042378802 2.035262e-02 0.073932503 0.0392919483
## X200954_at 0.092695273 -7.689529e-02 0.026542077 -0.0793416663
## X201128_s_at -0.047110013 4.854092e-02 -0.101249165 -0.0244223736
## X201184_s_at -0.111560546 1.303127e-01 -0.052855966 0.0118206621
## X201293_x_at 0.032684514 5.793292e-02 -0.026161422 0.0337818762
## X201398_s_at 0.028955786 2.352065e-02 0.051548933 0.0734452648
## X201441_at 0.009976248 -1.063089e-01 -0.058098210 0.0124869518
## X201453_x_at -0.155080544 1.159885e-01 0.216434630 0.0619457757
## X201516_at 0.041226737 4.359920e-02 0.113285759 0.1411073551
## X201527_at -0.012541050 -1.881117e-01 0.003388184 0.0624548119
## X201531_at 0.048623877 -4.789641e-02 0.007747794 0.0417946963
## X201577_at -0.157837832 -6.108131e-03 -0.003982075 0.0467593907
## X201584_s_at 0.234258258 2.756567e-02 0.184634205 0.1482390534
## X201656_at 0.165967599 7.672287e-03 -0.071230671 0.0633346438
## X202541_at -0.008139448 1.227677e-01 0.025613311 -0.0910304432
## X202737_s_at 0.189534649 3.486908e-02 -0.171273591 -0.0729813762
## X202861_at -0.140541725 1.083470e-01 0.152006158 -0.0199481780
## X202940_at 0.045525666 6.137881e-03 -0.029061026 -0.0173579346
## X202963_at -0.026001378 -3.654922e-01 -0.049641573 0.1052076643
## X203316_s_at 0.032913554 1.411625e-01 -0.106826341 0.0516744046
## X203554_x_at -0.029328681 -1.328120e-02 0.020473647 -0.0632843304
## X203755_at -0.090308556 -1.434712e-01 0.206466120 0.0299339216
## X204018_x_at -0.019332587 -3.107483e-02 0.017899393 -0.0096965112
## X204301_at -0.033353497 9.074739e-02 0.071763840 0.0171814119
## X204428_s_at 0.003653260 -9.589080e-02 0.033730595 0.1237385390
## X204641_at 0.022678718 4.674459e-02 -0.111836700 0.1477002725
## X204977_at 0.083666193 -3.558123e-02 0.067544335 0.0018797269
## X205019_s_at -0.109859248 -3.890621e-04 -0.083413503 -0.0435419262
## X205086_s_at 0.085884528 -1.107089e-01 0.013830938 -0.0100378693
## X205298_s_at 0.072818452 1.245936e-01 0.006857286 -0.0522551270
## X205306_x_at 0.125982378 1.651724e-01 -0.111918858 -0.0227000745
## X205392_s_at 0.052326339 6.052269e-02 -0.163220942 -0.1177975775
## X205440_s_at -0.093068395 -8.454971e-02 0.215764496 -0.2008928016
## X205531_s_at -0.042339975 -3.346100e-02 -0.044305357 0.2546628645
## X205554_s_at -0.125376816 -9.793227e-02 -0.093808739 -0.1654982446
## X205740_s_at -0.116914001 -3.590890e-03 0.018107580 -0.0098556238
## X205819_at 0.069866166 1.675753e-01 0.137880822 0.0605933757
## X205858_at 0.069522292 -2.052972e-01 0.056991562 -0.0126927250
## X205866_at -0.040736536 -4.963238e-02 0.009078776 -0.0736808209
## X205890_s_at 0.102295775 -8.579847e-02 -0.002989804 -0.0927139921
## X205911_at -0.098288046 4.046587e-02 -0.268974526 0.0082310769
## X206380_s_at -0.229884803 4.357606e-02 -0.228493424 0.0380519813
## X206453_s_at 0.037814488 6.672186e-02 -0.101972216 0.0951250721
## X206643_at 0.062699496 1.228427e-01 0.024746116 -0.0842590500
## X206680_at 0.051671076 -1.696007e-01 0.003148282 0.0628286216
## X207076_s_at -0.028235190 -7.812951e-02 0.090767996 0.0729988181
## X207218_at -0.195103064 -1.296076e-01 0.036459093 -0.1119092169
## X207262_at -0.194104128 -2.504364e-01 0.027893002 0.0713108431
## X207330_at 0.020107462 -5.472192e-02 -0.029433349 -0.0819793160
## X207609_s_at -0.110584867 -9.784029e-02 -0.062911255 0.0347722715
## X207804_s_at 0.172407410 -5.009304e-02 0.292529585 -0.2822285114
## X207828_s_at -0.078555633 2.539683e-02 0.029903287 0.0001597769
## X207995_s_at -0.116367890 4.870525e-03 -0.081645329 0.1273077015
## X208079_s_at 0.022020773 1.538548e-02 -0.002657770 -0.1345673021
## X208147_s_at 0.044980522 7.213685e-02 0.163601023 0.1197688334
## X208816_x_at -0.248656053 3.949741e-02 -0.160061592 -0.1819151172
## X209189_at 0.200532687 -5.266912e-02 -0.102997337 0.0031378158
## X209219_at -0.016446221 1.049757e-01 -0.028174854 -0.1390896551
## X209335_at 0.028405951 2.750022e-02 0.143580499 -0.0709309342
## X209365_s_at -0.024562910 3.112167e-02 0.094766615 0.0936477167
## X209447_at 0.060519976 -1.328154e-01 0.183309241 -0.0312746806
## X209458_x_at -0.012664151 5.582214e-05 -0.011343567 -0.0220018234
## X209821_at -0.015443648 2.212323e-02 -0.024234212 0.2258118114
## X209825_s_at -0.227256491 -2.790550e-01 -0.008266191 -0.0119072440
## X210095_s_at 0.004356110 -1.223266e-01 -0.027126581 -0.0049377955
## X210481_s_at 0.176450558 8.507892e-02 -0.098007469 0.2416472752
## X210909_x_at -0.081679057 1.103685e-01 0.140678820 -0.0506852122
## X211023_at 0.071655761 -7.458153e-02 0.008260086 0.0374617267
## X211378_x_at 0.054711820 5.452991e-02 -0.017979176 0.0021171471
## X211628_x_at -0.015564017 3.186610e-03 0.088421065 0.1789909388
## X211699_x_at -0.028145004 2.321754e-02 0.042514554 -0.0085942917
## X211745_x_at 0.001245879 1.049500e-02 0.005047736 0.0070293543
## X211765_x_at 0.015910317 4.334108e-02 -0.017626051 0.0155885131
## X211978_x_at 0.017418202 9.020635e-02 -0.004130908 -0.0137427964
## X212149_at -0.109402891 6.435065e-02 -0.012076598 0.0080731156
## X212551_at 0.117879795 -9.479669e-02 0.014991612 -0.0337183774
## X212554_at -0.006764875 -3.765808e-02 0.070665563 0.0119057155
## X212661_x_at 0.025095928 3.895667e-02 -0.007075937 0.0070370378
## X213068_at 0.068672581 3.195468e-02 -0.089467299 0.0972052105
## X213629_x_at 0.081568668 1.874706e-02 -0.052816457 -0.1305556379
## X214414_x_at 0.008280482 7.463818e-03 0.002177666 -0.0102497406
## X214421_x_at 0.026383943 -1.846132e-02 -0.060099134 -0.0421358259
## X214710_s_at -0.088431417 3.265732e-02 0.035994234 -0.1314412802
## X215138_s_at 0.028295142 8.988037e-03 0.040615592 0.0975756776
## X215330_at -0.014309644 1.270907e-02 -0.028607325 0.0705164680
## X215768_at 0.002592979 5.531532e-03 -0.023772882 -0.0062254795
## X216025_x_at 0.043468111 -2.273562e-02 -0.059065601 -0.0467212148
## X216661_x_at 0.024439467 -1.061182e-02 -0.045373234 -0.0373336559
## X216782_at -0.003182757 9.516366e-02 0.072703831 0.0591118356
## X217165_x_at 0.042347759 5.306124e-02 -0.055141129 -0.1001900698
## X217319_x_at 0.040156976 -9.798661e-02 -0.046682747 -0.1360299724
## X217414_x_at -0.021117191 -2.969474e-03 0.004173796 0.0305062940
## X217521_at 0.016253865 4.070558e-02 -0.068420642 -0.1748533479
## X218002_s_at -0.006225331 1.878690e-01 -0.007229753 -0.1461210824
## X218061_at 0.042466754 4.796865e-03 0.013230253 0.0862237691
## X219485_s_at -0.018709091 -1.834303e-02 -0.209706384 0.0470430129
## X219787_s_at 0.065780277 4.187563e-03 -0.151903230 -0.1096543416
## X220017_x_at 0.036919311 4.656499e-03 -0.037436724 -0.0389854446
## X220114_s_at -0.038287974 5.499313e-02 0.058442353 -0.0384624090
## X220116_at 0.355590907 -2.498969e-01 -0.112829534 0.0485350356
## X220148_at -0.075475484 1.583991e-01 0.170191487 0.2284712403
## X220491_at -0.138621450 4.401424e-02 -0.106462410 0.2243759378
## X220496_at 0.069647264 1.251093e-01 0.112546703 -0.0518658240
## X36829_at -0.077200696 8.619426e-02 -0.021949442 0.0256310352
## PC61 PC62 PC63 PC64
## X200606_at 0.1017779791 0.0493166439 -0.071345020 -8.762645e-03
## X200734_s_at 0.0855340812 -0.0702705190 -0.147564601 6.580700e-02
## X200882_s_at 0.1407001291 0.1566282172 0.175576361 -1.758492e-01
## X200910_at 0.0401611031 -0.0352974560 -0.021156403 -1.178552e-01
## X200954_at -0.0432294758 0.0108468276 0.018104757 -1.667624e-02
## X201128_s_at -0.1295454131 0.0494183971 -0.015261437 -5.989135e-02
## X201184_s_at 0.1278863732 0.0112466750 -0.069001556 -1.015649e-01
## X201293_x_at -0.0043205452 -0.0311409466 0.015066348 2.727797e-02
## X201398_s_at -0.0014693634 0.0040208949 -0.084737415 5.636323e-02
## X201441_at -0.1668982752 0.0643923162 0.055081209 1.017274e-02
## X201453_x_at -0.1121215580 -0.0401876558 -0.123338473 7.420959e-02
## X201516_at -0.0481777542 0.1621445221 -0.099122349 1.826674e-02
## X201527_at -0.0327437605 -0.0311199687 0.171846890 -4.064433e-02
## X201531_at 0.1136004841 0.1287998516 -0.085537092 -1.741490e-02
## X201577_at -0.0663027371 -0.1304284172 0.036897569 7.230685e-03
## X201584_s_at 0.0434825782 0.0394559069 -0.082995117 1.896136e-02
## X201656_at -0.1814976524 0.0662036256 -0.124551813 1.242359e-01
## X202541_at -0.1199455456 0.0108467036 0.056964370 -6.788952e-02
## X202737_s_at 0.2173881531 -0.2033586283 -0.065145115 3.098532e-02
## X202861_at -0.1035998050 -0.1342146504 0.047496153 1.004416e-01
## X202940_at -0.0321480134 0.0916322074 0.010220724 -8.676884e-03
## X202963_at 0.0469096542 -0.1209276795 0.005697170 -3.398880e-02
## X203316_s_at -0.1975446715 -0.2460224343 -0.091288943 4.575978e-05
## X203554_x_at 0.0470423452 -0.1255087643 -0.054354869 -6.068405e-02
## X203755_at -0.0351896070 0.0359996283 0.106111472 -3.189343e-02
## X204018_x_at 0.0064669944 0.0088938439 0.015396734 1.252512e-02
## X204301_at 0.0975583014 0.0175075618 -0.091057769 5.647102e-02
## X204428_s_at -0.1102081580 0.1418218174 0.146797720 6.408765e-02
## X204641_at 0.0864726790 0.0827037986 0.088339382 2.333433e-01
## X204977_at 0.0020129311 0.0260247764 0.098885071 8.433978e-02
## X205019_s_at 0.0156362240 -0.0397035405 0.048209868 5.812030e-02
## X205086_s_at 0.0215907016 -0.0511923507 -0.051084050 -2.558852e-02
## X205298_s_at 0.0016785680 -0.0594414991 -0.094475702 2.610686e-02
## X205306_x_at -0.0311947671 -0.1181239509 -0.079764355 6.861488e-02
## X205392_s_at 0.0935642584 0.1193501341 0.039424181 1.781949e-01
## X205440_s_at 0.0641514587 -0.0146248212 0.049540867 3.837897e-02
## X205531_s_at 0.0203197328 0.0723079195 0.068174735 1.995223e-01
## X205554_s_at -0.0339734176 -0.2254122082 -0.040454877 2.909625e-02
## X205740_s_at 0.1174682115 -0.0956104056 -0.105799126 9.467879e-02
## X205819_at -0.0801194990 0.1477740063 0.189183120 -1.464959e-01
## X205858_at 0.0134228075 -0.0878382630 -0.053532203 -2.762971e-02
## X205866_at -0.1361865978 -0.0465002099 0.045914702 9.201645e-02
## X205890_s_at -0.1620655910 -0.0444029144 0.177870387 1.211497e-01
## X205911_at -0.0002888337 0.0527768445 0.204360900 1.708337e-01
## X206380_s_at -0.0926753435 0.1418950136 -0.244823510 -3.797876e-02
## X206453_s_at -0.2203910460 -0.0841424973 0.065995777 -1.576216e-01
## X206643_at -0.0528472193 0.0232866286 0.007117763 7.739896e-02
## X206680_at 0.3961780365 -0.0864399487 0.087373610 1.589258e-01
## X207076_s_at -0.0292269610 0.0960836826 -0.147330520 -3.763182e-02
## X207218_at 0.1645663545 0.2053928136 -0.151365535 -7.018497e-02
## X207262_at -0.0561504249 -0.1634858131 0.098988377 -2.477993e-01
## X207330_at -0.0621325203 -0.0583545449 0.027405197 1.686274e-02
## X207609_s_at -0.0588045330 0.0351734387 -0.135487793 8.536994e-02
## X207804_s_at -0.0329872160 -0.0417277391 -0.044735953 3.642275e-02
## X207828_s_at -0.0731428931 -0.1782382151 -0.057988452 -2.476525e-02
## X207995_s_at -0.1395112288 -0.0232903380 -0.115679331 -1.950318e-03
## X208079_s_at 0.0799631115 0.2439459539 -0.199953349 -1.844724e-01
## X208147_s_at -0.0658215617 0.1678171689 0.032941904 2.433035e-01
## X208816_x_at 0.0253185446 0.2065464431 0.193338358 -1.073947e-01
## X209189_at 0.0774009101 -0.0890642074 0.122375385 -1.357682e-01
## X209219_at 0.1099355966 0.0756215648 0.167692521 -9.739013e-03
## X209335_at -0.1527681145 -0.0302217200 -0.038124104 8.373693e-02
## X209365_s_at -0.0048127425 -0.0574247743 0.023755522 4.792889e-02
## X209447_at -0.1608484691 0.1996251155 -0.084375517 -4.357870e-02
## X209458_x_at -0.0218768455 -0.0046019736 -0.015495978 -1.088784e-02
## X209821_at 0.0154674079 -0.0176645536 0.085827580 -7.580879e-02
## X209825_s_at -0.1324109131 0.1331502453 0.003848748 2.254902e-01
## X210095_s_at 0.1623818172 0.0126775159 -0.006055360 -8.465723e-02
## X210481_s_at 0.0440116616 -0.0226569421 -0.011306231 -2.386059e-01
## X210909_x_at 0.1412906588 0.1392029313 -0.098107535 -1.318500e-01
## X211023_at 0.0759101477 0.0094372292 -0.032288920 8.203138e-03
## X211378_x_at 0.0083657322 -0.0230064782 0.026546448 1.600042e-02
## X211628_x_at -0.0550984791 -0.1084321597 -0.119662783 -6.186532e-02
## X211699_x_at -0.0804436087 -0.0334923305 -0.001174682 -1.380041e-02
## X211745_x_at -0.0260150043 0.0198189305 0.012845461 2.185096e-02
## X211765_x_at -0.0018967322 -0.0097099843 0.022176441 9.225450e-03
## X211978_x_at 0.0182282629 -0.0050923330 -0.002377847 1.524615e-03
## X212149_at -0.0724994440 0.0579528969 0.147398065 -4.368654e-02
## X212551_at 0.0497577506 -0.0768096303 -0.142793152 7.981765e-03
## X212554_at 0.0552940407 0.0092430305 -0.009128521 8.847665e-03
## X212661_x_at 0.0144306251 0.0016284451 0.015023599 -6.400738e-03
## X213068_at 0.0078008162 0.2041513704 -0.206358635 -8.558871e-02
## X213629_x_at -0.0417885329 -0.0071271703 -0.035118313 4.619323e-02
## X214414_x_at 0.0347994301 0.0085967725 0.020026158 2.667283e-02
## X214421_x_at 0.0128017485 -0.0018863669 -0.002669910 2.213859e-02
## X214710_s_at 0.0010370986 -0.0530673623 0.003179192 1.882650e-02
## X215138_s_at -0.0774902127 -0.0008630300 -0.064731798 1.749517e-02
## X215330_at 0.0039920322 0.0239491513 0.048168480 4.698885e-02
## X215768_at 0.0140395658 0.0498011167 -0.040455839 1.073708e-02
## X216025_x_at 0.0222410962 0.0089189924 -0.022344998 3.632958e-02
## X216661_x_at 0.0163138093 -0.0171507919 -0.002788398 -4.051211e-03
## X216782_at -0.0296832042 -0.0211049395 -0.025849564 -8.012655e-02
## X217165_x_at 0.0276338214 0.0047951796 -0.035541435 4.170730e-03
## X217319_x_at -0.1816754967 -0.0515588490 -0.055992568 -3.438811e-01
## X217414_x_at -0.0076186938 0.0061116740 0.025351808 -1.943141e-02
## X217521_at -0.0170167319 -0.0046313202 -0.011848949 6.460987e-02
## X218002_s_at 0.0411900297 -0.0502331012 0.016240452 7.890292e-02
## X218061_at -0.1158910646 0.1801146197 0.105618399 2.610350e-03
## X219485_s_at -0.0085097078 0.0814278848 -0.016713715 8.904146e-02
## X219787_s_at -0.0930070888 0.1653163718 0.041111545 -1.894991e-01
## X220017_x_at 0.0173904243 0.0001065966 -0.010565462 4.448012e-02
## X220114_s_at 0.1070712948 0.0176669111 0.000063555 -1.632754e-02
## X220116_at -0.0827667335 0.0912443859 0.065781417 -4.874500e-02
## X220148_at 0.1849174612 -0.0824749349 0.330746249 -1.488366e-01
## X220491_at 0.0977025629 -0.0433457183 -0.203089150 -3.851507e-02
## X220496_at -0.1135405488 -0.0121993389 0.048881153 6.211542e-02
## X36829_at -0.0574868647 -0.1597258395 0.058273455 -1.030079e-01
## PC65 PC66 PC67 PC68
## X200606_at -1.386086e-02 -4.523986e-03 -0.0655001449 0.1166546640
## X200734_s_at -7.034144e-02 3.183568e-02 0.0553971187 0.0372099886
## X200882_s_at -1.125013e-01 -1.343924e-02 -0.0200070084 0.1045270700
## X200910_at -6.724549e-02 1.143038e-01 0.0575289763 0.0309138921
## X200954_at -3.885513e-02 -6.771703e-02 0.0028105190 0.0564819172
## X201128_s_at 1.446156e-02 1.661874e-01 -0.0671789048 0.1945320491
## X201184_s_at 1.669033e-01 2.606879e-03 -0.0962339171 -0.1393650326
## X201293_x_at 7.779575e-03 2.345018e-02 -0.0382862122 -0.0193603091
## X201398_s_at 1.007672e-01 -9.353911e-02 -0.0112932372 -0.0001555717
## X201441_at 5.639102e-02 4.011234e-02 -0.1344958493 -0.1599462463
## X201453_x_at 1.193403e-02 7.792906e-02 -0.0024089018 0.0530131483
## X201516_at -2.556534e-03 -2.822408e-02 0.0856837846 -0.0135195789
## X201527_at -3.429871e-02 1.060418e-02 0.0377521368 0.0503763392
## X201531_at 1.276117e-01 -1.586296e-02 -0.0241040136 0.0523192176
## X201577_at -9.466239e-03 5.728069e-02 -0.0377707515 0.2034987976
## X201584_s_at -3.690330e-02 -1.168305e-02 -0.0413850863 -0.1216102659
## X201656_at 7.338279e-02 1.138003e-01 0.0264546010 0.0556035338
## X202541_at -5.285639e-02 -7.613429e-02 -0.0482266463 -0.0782356940
## X202737_s_at 2.499512e-02 -9.205210e-02 -0.0807618134 0.0813848830
## X202861_at -9.917536e-03 9.383953e-03 -0.0956515211 -0.1398005273
## X202940_at -2.400598e-02 -4.294502e-02 0.0236089270 -0.0363377932
## X202963_at 2.388314e-01 -1.846460e-01 0.0420332762 0.0422225447
## X203316_s_at -1.353618e-01 1.172398e-01 0.1218933577 -0.0612531673
## X203554_x_at -7.476885e-02 -4.396131e-02 -0.0288984763 -0.0305285219
## X203755_at 3.903838e-02 9.291841e-02 -0.0602516982 0.1489365894
## X204018_x_at -6.634231e-02 -1.683571e-03 -0.0180756739 -0.0380151314
## X204301_at 2.847328e-02 -3.209069e-02 0.0327436435 0.0379251167
## X204428_s_at 3.827483e-02 9.488338e-02 -0.0512694862 -0.0644645565
## X204641_at 6.296811e-02 1.110575e-02 0.1967711144 -0.0963756973
## X204977_at -6.677793e-02 -3.748908e-02 0.0169913240 -0.1599017016
## X205019_s_at -6.520938e-02 4.631901e-02 0.0689075371 -0.0066707044
## X205086_s_at 7.593227e-03 -1.046699e-02 -0.1334177864 0.0615630765
## X205298_s_at -3.409496e-02 1.964210e-03 -0.0229395804 -0.0166519301
## X205306_x_at 1.043404e-01 2.275201e-02 -0.1742329054 0.0617353360
## X205392_s_at 3.870638e-02 -9.631790e-02 0.0428925949 0.0529900207
## X205440_s_at 7.121685e-02 8.621862e-03 0.0419301479 0.0398448235
## X205531_s_at 1.097458e-02 9.190860e-02 0.1814365433 0.1308189869
## X205554_s_at -1.026200e-01 -7.696039e-02 -0.0262145479 0.0601357973
## X205740_s_at -6.145310e-02 -8.386657e-02 0.1727955706 0.1666064445
## X205819_at 2.279100e-01 -4.540177e-02 -0.0865386064 0.1591031269
## X205858_at -1.926274e-02 -3.064860e-02 0.1310327467 -0.0295467888
## X205866_at -1.070989e-01 -2.066189e-01 -0.0998295945 0.0626889685
## X205890_s_at -4.442636e-02 -5.882743e-02 0.1139372858 0.0099397572
## X205911_at 2.776814e-01 2.152301e-01 -0.2504758007 0.1235137013
## X206380_s_at -3.267767e-01 1.170828e-01 0.1876629234 0.0314099858
## X206453_s_at 7.681645e-02 -3.672166e-01 0.0713698148 0.0353276957
## X206643_at -6.335571e-02 -1.035008e-02 0.0133969084 -0.0520507940
## X206680_at -2.236630e-01 1.964416e-01 -0.1881347500 -0.0534797052
## X207076_s_at 6.742788e-03 7.529258e-02 -0.0140053128 -0.0987565339
## X207218_at -4.840220e-02 -1.302150e-01 0.0660959347 -0.0811048845
## X207262_at 9.698867e-02 -1.500151e-01 -0.1006214700 -0.1107601537
## X207330_at 3.607546e-02 -1.332943e-02 0.0446417567 0.0701057493
## X207609_s_at 1.394480e-01 3.147357e-02 -0.0939843072 -0.2137542889
## X207804_s_at 2.519087e-01 1.735670e-01 0.2205321066 -0.1804263925
## X207828_s_at -8.485506e-02 1.342785e-02 -0.1135521620 -0.1626085680
## X207995_s_at -8.206702e-02 -2.875688e-02 -0.1264071948 0.1118636640
## X208079_s_at 9.450294e-02 -8.732002e-02 -0.1792688670 0.2790339145
## X208147_s_at -2.101016e-01 3.495498e-02 -0.0842698847 -0.0141570438
## X208816_x_at -1.601534e-02 1.522165e-05 -0.0611334947 -0.1123756531
## X209189_at -6.348334e-02 7.531023e-02 0.1919498988 0.0616455119
## X209219_at 1.139846e-02 1.754587e-03 0.1049285639 0.0864271662
## X209335_at -1.134697e-01 4.005798e-03 -0.2859717414 0.1461168765
## X209365_s_at 4.553792e-02 -1.824299e-02 -0.0237910187 0.1160068985
## X209447_at -9.001373e-02 1.620481e-02 -0.0329775064 0.1191338933
## X209458_x_at -2.620344e-02 -2.199711e-02 0.0085637704 -0.0184325363
## X209821_at -7.664563e-02 -2.842502e-04 -0.1046470167 -0.0758541142
## X209825_s_at -8.860330e-02 -9.211065e-02 0.0555193495 -0.0140660663
## X210095_s_at -1.651093e-01 4.470039e-02 -0.0464525516 -0.0948051610
## X210481_s_at -1.333338e-01 -7.316399e-02 -0.1652844115 -0.0975103820
## X210909_x_at -2.571079e-03 -8.497243e-02 -0.0924831088 -0.1657063964
## X211023_at 8.350316e-03 -9.809301e-02 -0.0113566844 -0.0316308681
## X211378_x_at -8.331604e-04 1.755433e-02 0.0209112419 -0.0110334445
## X211628_x_at 1.346333e-01 3.368939e-03 -0.0482412401 -0.0485250203
## X211699_x_at -1.031726e-02 -1.031503e-02 -0.0350072616 -0.0464540130
## X211745_x_at 4.925812e-05 -2.170123e-02 0.0272746337 -0.0170031771
## X211765_x_at -7.538515e-03 2.062513e-02 -0.0315567043 -0.0180293915
## X211978_x_at -4.723349e-02 5.048856e-02 -0.0214123976 -0.0039283561
## X212149_at -8.552517e-02 9.172789e-04 0.1225776194 -0.0989028344
## X212551_at -4.854445e-02 -1.234653e-02 -0.0415570404 -0.0140201273
## X212554_at -2.343149e-02 2.746150e-02 -0.0283495063 -0.0245315133
## X212661_x_at -1.526855e-02 4.062362e-02 -0.0339051506 -0.0214751412
## X213068_at -2.590913e-02 -3.092934e-02 0.1162740289 -0.0698985710
## X213629_x_at -8.368564e-02 3.696151e-02 -0.0923235738 -0.0188117908
## X214414_x_at 1.970956e-02 2.666700e-02 0.0067452043 0.0537144603
## X214421_x_at 1.623356e-02 -2.842302e-02 -0.0089411048 0.0184276955
## X214710_s_at 3.450130e-02 -3.138084e-02 -0.0255580853 -0.0344797329
## X215138_s_at -3.787841e-02 -6.038861e-02 -0.0195720684 0.0599710757
## X215330_at 2.426849e-02 1.496402e-02 -0.0734709832 0.0293547059
## X215768_at -2.300012e-02 -2.195261e-02 -0.0112666441 0.1216628268
## X216025_x_at 2.813563e-02 -4.130079e-02 -0.0105892599 0.0212709277
## X216661_x_at 3.729375e-02 -3.366616e-02 -0.0051316940 0.0591054361
## X216782_at -1.571983e-02 -8.134667e-02 -0.0132960805 0.0554187894
## X217165_x_at -1.028639e-01 5.267804e-03 -0.0252299161 0.0330813951
## X217319_x_at 4.808964e-02 5.178361e-01 0.0439417807 -0.0486082760
## X217414_x_at -2.031030e-02 -2.867407e-03 -0.0205338482 0.0005083997
## X217521_at 3.805270e-03 7.958790e-03 0.0101045007 0.0144203465
## X218002_s_at 1.250689e-02 -1.988543e-01 -0.0340171742 -0.2371705391
## X218061_at -2.069762e-02 -1.103552e-01 -0.0256812983 -0.1854928251
## X219485_s_at 1.718596e-01 6.461602e-02 -0.0903053693 -0.2671938624
## X219787_s_at -7.681810e-02 -7.604314e-02 0.1478101574 0.0188464751
## X220017_x_at 1.235526e-02 -4.087846e-02 0.0001127832 0.0369863275
## X220114_s_at 1.595276e-01 1.195019e-01 0.1124237278 -0.0945854407
## X220116_at -7.486489e-02 -2.679395e-02 0.0052740026 -0.0114908398
## X220148_at -1.062459e-01 7.328048e-02 0.1098609648 0.0594961563
## X220491_at 2.494408e-01 1.764066e-03 0.2080703060 0.0697139018
## X220496_at 1.022646e-01 -9.375301e-02 0.2092992668 0.0750258485
## X36829_at -4.067503e-02 -7.078611e-02 0.1504381789 -0.0567081158
## PC69 PC70 PC71 PC72
## X200606_at 0.018862446 0.0283407324 0.0073682529 -1.084416e-02
## X200734_s_at -0.002713088 0.0321956906 0.0839289343 -7.624400e-03
## X200882_s_at -0.045342939 -0.0663757919 -0.0088721931 4.197666e-02
## X200910_at -0.101415241 0.0653633677 0.0857058657 -6.561155e-02
## X200954_at -0.061962018 -0.0552093854 0.0205855989 9.322101e-02
## X201128_s_at 0.044526574 -0.0018750171 -0.2617419825 -1.431289e-01
## X201184_s_at -0.018793781 -0.0774463754 -0.0224884589 -7.674921e-02
## X201293_x_at 0.040074893 -0.0042933189 0.0043847360 -2.360006e-03
## X201398_s_at 0.012068628 0.1147211932 0.0556856160 -3.314813e-02
## X201441_at 0.015700272 0.0263946870 -0.0238146968 4.263866e-02
## X201453_x_at -0.105288047 -0.0070276542 0.1125414396 5.731493e-04
## X201516_at 0.026522913 0.0294043825 -0.0229074494 -2.639329e-02
## X201527_at -0.040423436 0.1581886502 0.0305114238 -5.986307e-02
## X201531_at -0.022095834 0.0403138471 0.0398413012 -9.510842e-02
## X201577_at -0.147893702 -0.0616508046 -0.0205580257 2.050238e-01
## X201584_s_at 0.217903900 -0.2583753387 0.0940503082 4.509909e-02
## X201656_at -0.013475594 0.0323108794 -0.0331474800 -5.487824e-02
## X202541_at -0.004452805 -0.0226889922 -0.0881534580 -5.402593e-03
## X202737_s_at 0.025965384 -0.0989930342 0.0549736348 9.660449e-02
## X202861_at 0.006193787 0.0345927991 0.0475053869 4.717171e-02
## X202940_at 0.071928973 0.0305987669 0.0175903669 2.350485e-02
## X202963_at 0.033392906 0.0951690545 -0.0007588712 1.650748e-02
## X203316_s_at 0.283962421 0.0608891921 -0.1717185309 -8.871138e-02
## X203554_x_at -0.002043210 0.1565933999 -0.0053829196 -5.551591e-02
## X203755_at 0.123917641 -0.0867483307 -0.2110423746 8.778097e-02
## X204018_x_at 0.012988072 -0.0045902560 -0.0181623008 1.650645e-03
## X204301_at 0.011639248 -0.0415172015 0.0295994237 -1.901239e-03
## X204428_s_at -0.004808720 -0.2414739054 0.2110589508 2.982646e-01
## X204641_at -0.085482384 0.2234543779 0.0781540062 3.750014e-02
## X204977_at -0.033991013 0.1400525950 0.0528222537 -1.860831e-02
## X205019_s_at -0.166356739 0.0021459646 0.0196824458 -5.633018e-02
## X205086_s_at 0.020376622 -0.0067494201 0.0035317728 -2.008629e-02
## X205298_s_at 0.029403347 -0.0180682767 -0.0062396002 -3.458898e-02
## X205306_x_at -0.042987286 0.0884643373 -0.0039555956 5.945417e-02
## X205392_s_at 0.175639241 0.0239712378 -0.0560395819 9.686908e-04
## X205440_s_at -0.142835617 -0.0851805628 0.0476586038 -8.713546e-02
## X205531_s_at -0.061597771 0.0702539867 -0.0044073594 -2.221717e-03
## X205554_s_at 0.175407603 -0.1240872404 0.0226948373 -9.818081e-02
## X205740_s_at -0.015712555 -0.0229961334 -0.1740384373 -5.573293e-02
## X205819_at 0.081817867 0.2354595336 -0.0708294686 4.164015e-02
## X205858_at -0.076611390 -0.0123947575 -0.0003681298 6.399356e-04
## X205866_at 0.175156992 -0.1061225584 0.2297999212 -2.286611e-01
## X205890_s_at -0.006192879 0.0795700490 0.0987346162 2.095350e-02
## X205911_at 0.049367414 0.1734247756 0.0424739293 -1.322253e-01
## X206380_s_at -0.018600818 0.0196022414 -0.0273091494 2.046771e-01
## X206453_s_at -0.202522669 -0.0944104575 -0.2627428085 1.038650e-01
## X206643_at -0.017601735 -0.1239301843 -0.0694206522 3.380680e-02
## X206680_at -0.129221057 -0.1200399361 -0.2034372464 -1.159775e-01
## X207076_s_at 0.188626121 0.1473144434 -0.0419975403 -1.893922e-01
## X207218_at 0.038082553 0.1926441370 0.0320710183 1.469826e-01
## X207262_at 0.179625346 0.0346663845 0.0042175701 -7.041528e-02
## X207330_at 0.027000580 0.0659395501 -0.0203571377 -1.218151e-02
## X207609_s_at 0.112609487 -0.0491140185 -0.1138921172 -1.596366e-01
## X207804_s_at -0.103692862 -0.0112040690 -0.3816779637 1.397382e-01
## X207828_s_at 0.103457613 0.1666905751 0.0160921384 9.518848e-02
## X207995_s_at 0.100330345 -0.1014427228 0.0237209857 3.668052e-02
## X208079_s_at -0.052963865 -0.1207537079 -0.0544333474 -1.321327e-01
## X208147_s_at 0.112330322 0.0077700373 -0.1490533028 -1.511942e-01
## X208816_x_at 0.068951170 -0.1202031822 -0.0969512380 -2.869829e-02
## X209189_at 0.158174867 0.0446689121 -0.0695898903 3.801138e-03
## X209219_at 0.188110850 0.1970680506 0.0410971764 1.447046e-01
## X209335_at -0.095621330 0.1358655153 -0.1163777695 1.831964e-01
## X209365_s_at -0.008887079 -0.1115115220 0.1075607551 2.171392e-01
## X209447_at 0.031728555 0.0645442062 0.0318201501 -1.848968e-03
## X209458_x_at 0.013871732 0.0065770288 -0.0167552909 4.180388e-03
## X209821_at -0.090718448 0.1021190511 0.0916786967 1.432246e-01
## X209825_s_at -0.222434904 -0.0630008168 -0.1027677207 -1.234475e-01
## X210095_s_at 0.104177972 0.1108613695 0.0390808134 9.813057e-02
## X210481_s_at -0.292210350 0.1157486027 0.0122364020 -1.001136e-01
## X210909_x_at 0.053440878 0.1425370159 -0.0345188675 1.549384e-02
## X211023_at 0.022056388 0.0327457684 0.0749779315 3.308324e-02
## X211378_x_at -0.034862721 -0.0004505545 -0.0019609432 -1.554170e-02
## X211628_x_at 0.025879321 -0.1007492622 -0.0233896735 2.248762e-03
## X211699_x_at 0.011084223 -0.0053125532 0.0189900031 -2.391832e-02
## X211745_x_at 0.001200690 -0.0003220206 0.0248278684 -3.219914e-02
## X211765_x_at 0.030303507 0.0025399209 0.0027586917 7.659473e-03
## X211978_x_at 0.043318728 0.0387764648 -0.0508421793 -5.403789e-02
## X212149_at 0.060109739 0.0037901890 -0.0641266683 6.582234e-03
## X212551_at -0.080165801 0.0333893890 0.0494247981 -1.634103e-02
## X212554_at 0.011299977 -0.0511684380 0.0815737289 1.684713e-02
## X212661_x_at 0.022787926 -0.0129568400 0.0126278925 -2.032384e-02
## X213068_at -0.028585865 -0.0309859845 0.0498980842 -1.120784e-01
## X213629_x_at 0.020646485 -0.0065665957 -0.0218088758 5.171893e-02
## X214414_x_at -0.036091143 0.0250416119 0.0317847217 -5.998945e-04
## X214421_x_at 0.016246885 -0.0125847586 -0.0177030673 2.059918e-02
## X214710_s_at -0.153858696 0.0713979554 0.0957678249 -1.099660e-01
## X215138_s_at -0.002459088 0.0038371480 0.0127334040 5.061772e-02
## X215330_at -0.067464812 -0.0449233348 0.0238354623 -9.100159e-03
## X215768_at -0.047227817 0.0510778492 0.0480447639 7.862387e-02
## X216025_x_at 0.023220496 0.0169270608 -0.0297170525 3.453862e-02
## X216661_x_at -0.029873789 -0.0205343218 -0.0015072092 1.909340e-02
## X216782_at 0.013742850 -0.0674016199 -0.0335920178 2.931058e-02
## X217165_x_at -0.007976403 -0.0092342542 -0.0171672011 -1.174025e-02
## X217319_x_at -0.188267416 0.0259352331 0.2048612270 -1.176457e-01
## X217414_x_at -0.006096151 0.0229416449 -0.0214339372 7.342331e-03
## X217521_at -0.052584823 -0.0233680441 0.1099574493 2.971824e-02
## X218002_s_at -0.211930131 0.0725970911 -0.0694477012 -9.289235e-02
## X218061_at -0.078934299 0.0203926952 -0.0508521882 -5.244857e-02
## X219485_s_at -0.070132319 -0.3249832443 -0.0182491871 9.746036e-02
## X219787_s_at -0.002794851 -0.1549131452 0.1014842300 5.052082e-05
## X220017_x_at 0.008614079 -0.0067679516 -0.0284255021 4.668692e-02
## X220114_s_at 0.227219847 -0.1044153361 0.1357335920 1.780752e-01
## X220116_at 0.058025027 -0.0219472946 -0.1487449805 -5.225647e-02
## X220148_at 0.010065040 -0.1946356665 -0.0993512303 -2.070342e-01
## X220491_at -0.009401161 -0.0136405640 -0.1360960767 -4.809156e-03
## X220496_at -0.016042729 -0.1021099418 0.2923692436 -3.552440e-01
## X36829_at -0.010824446 0.0197803209 -0.0200767176 4.244649e-02
## PC73 PC74 PC75 PC76
## X200606_at -3.244627e-02 -0.005395226 -0.0352951803 -0.0634061885
## X200734_s_at -1.275266e-01 -0.042937548 -0.0300384523 0.0301458618
## X200882_s_at 8.272778e-02 -0.200916593 -0.0864678566 0.0684545196
## X200910_at 1.062812e-02 0.063428571 0.1759390955 0.1150130816
## X200954_at 9.885905e-03 -0.009361679 -0.0301406547 0.0400250204
## X201128_s_at 1.852719e-01 -0.119176289 0.1562406207 -0.0503711881
## X201184_s_at 3.275056e-02 -0.049227076 -0.0143838700 -0.0629601977
## X201293_x_at 1.552480e-02 0.035766476 -0.0399377980 -0.0338992169
## X201398_s_at 4.145376e-02 0.054559681 -0.1177689604 0.0627884207
## X201441_at -2.378431e-02 -0.019015675 0.0911553306 0.0789903154
## X201453_x_at -5.378750e-02 0.110100316 -0.0891653130 0.0670914193
## X201516_at -5.811082e-02 0.071407711 0.0866419305 -0.0425378833
## X201527_at -1.123870e-02 0.103002854 -0.1147625371 -0.0224696556
## X201531_at 5.888408e-02 -0.336480614 -0.1272285647 0.0569688520
## X201577_at 1.012976e-01 -0.192872994 -0.3156711434 -0.1550183403
## X201584_s_at 2.691567e-02 0.004073977 0.1383091667 -0.1745577818
## X201656_at 1.504131e-02 0.089487370 0.0610903377 0.0765477067
## X202541_at -3.228740e-02 -0.048513036 0.0504269150 -0.0080676478
## X202737_s_at -7.272198e-02 0.026063359 0.1258366445 0.0810585312
## X202861_at 1.583749e-01 -0.069986078 0.0314143003 0.0827349847
## X202940_at -9.642385e-05 0.008624897 0.0100362746 0.0259639032
## X202963_at -2.699385e-02 -0.024299726 0.1256190264 -0.0243792469
## X203316_s_at -1.655951e-01 0.009143458 -0.1724320654 -0.1177478915
## X203554_x_at 1.069562e-01 -0.081898538 0.0208826795 0.1997499699
## X203755_at -1.579780e-01 -0.203033312 0.0762294277 -0.1936374519
## X204018_x_at -1.308276e-02 -0.017458245 -0.0082410556 -0.0434228146
## X204301_at 2.692336e-02 -0.015301588 0.0027788400 -0.0121935811
## X204428_s_at 4.570544e-02 0.062281625 0.0079319415 -0.0217915004
## X204641_at 1.177827e-01 0.008225950 0.0171499611 -0.0757920354
## X204977_at -5.913566e-02 -0.035538862 -0.0025930532 0.1408622768
## X205019_s_at -9.203326e-02 0.108598648 -0.0397044590 -0.1076013473
## X205086_s_at -3.116505e-02 -0.053160846 -0.0391933466 0.0890874765
## X205298_s_at -6.494625e-03 -0.062786491 -0.0159000149 0.0057802997
## X205306_x_at 2.129162e-01 0.043093326 -0.0382833659 -0.0762962845
## X205392_s_at -2.111810e-01 -0.085619062 -0.0200036610 -0.1205452943
## X205440_s_at -3.663321e-02 -0.039626305 -0.1832679444 -0.0570564842
## X205531_s_at 5.459514e-02 0.005593886 0.1104887077 -0.0939926820
## X205554_s_at -3.743214e-02 -0.117799609 0.0867094475 0.0738882175
## X205740_s_at 3.652209e-02 -0.061650471 -0.0518577487 -0.1170045226
## X205819_at -2.784881e-01 -0.052415818 0.0260964763 -0.0381757692
## X205858_at -2.894609e-02 0.053120003 0.0621803487 0.0921970546
## X205866_at 9.881095e-02 -0.063439362 0.0053802696 -0.0603417924
## X205890_s_at 4.495687e-02 0.056956519 -0.1605763731 -0.0111907096
## X205911_at 4.265391e-03 0.000807645 -0.0986914916 0.1346677888
## X206380_s_at 1.380477e-01 0.090966091 -0.0225707399 0.2272081464
## X206453_s_at 3.818756e-02 -0.164915511 -0.0248741964 0.1201961272
## X206643_at -8.891653e-03 0.031088666 -0.0726610645 -0.0188907612
## X206680_at 4.354354e-02 0.062745467 -0.0013229838 -0.0236667762
## X207076_s_at -1.487722e-01 -0.089719543 0.1079590057 0.2054648997
## X207218_at 6.180645e-02 -0.042274723 0.0127099664 -0.2971989863
## X207262_at 3.028434e-01 0.303312931 -0.0842400706 -0.0025149038
## X207330_at -4.699225e-02 0.008360645 0.0316429073 0.0191789832
## X207609_s_at -1.024612e-02 0.071824503 -0.1665465304 -0.3360369983
## X207804_s_at 2.588360e-01 0.079326454 0.0348224156 0.0006984308
## X207828_s_at -8.243734e-02 -0.044919787 -0.0979439194 0.0269398288
## X207995_s_at 3.510048e-02 0.052963836 0.2191269148 0.0037298698
## X208079_s_at -2.631438e-02 0.427490963 -0.0953544448 0.0464251631
## X208147_s_at 1.992440e-01 -0.029167229 -0.1729011761 0.0425743480
## X208816_x_at 7.518559e-02 0.060891279 0.0622569248 0.0695440048
## X209189_at 1.486876e-02 0.211560968 0.0325692693 -0.0467984760
## X209219_at 1.708592e-01 0.069357927 0.2375479349 -0.1183178461
## X209335_at -4.473503e-03 0.100435746 0.1821203777 -0.0403045599
## X209365_s_at -9.475219e-02 0.038950386 0.1010068074 -0.0014952887
## X209447_at -5.955736e-02 0.076703909 -0.0506239152 0.1192638268
## X209458_x_at -3.442963e-02 -0.027334900 -0.0104104425 -0.0504018972
## X209821_at -2.741909e-02 -0.004671325 -0.0436816262 -0.0599256010
## X209825_s_at -2.271535e-01 -0.011966618 0.0778315030 0.0175064181
## X210095_s_at -4.348689e-02 -0.154918562 0.0567951409 0.0057533380
## X210481_s_at 5.431252e-02 -0.030257645 -0.0551514436 -0.2177425369
## X210909_x_at 1.081448e-02 -0.088914663 0.0837292906 -0.0117473122
## X211023_at 5.214779e-02 0.022896214 -0.0325724784 0.0277056075
## X211378_x_at 1.553074e-02 0.046139225 0.0160997155 -0.0323297875
## X211628_x_at 7.757147e-03 -0.002535691 0.0014856647 -0.0163136930
## X211699_x_at -3.236182e-02 0.027881205 0.0008750546 0.0057477711
## X211745_x_at -6.078586e-03 -0.024420426 -0.0126063124 0.0049480344
## X211765_x_at 1.304250e-02 0.068227631 -0.0426975631 -0.0459715221
## X211978_x_at -4.936785e-03 0.012983413 -0.0322186831 0.0003492720
## X212149_at -9.870922e-02 -0.022646044 0.0958526508 -0.0499627591
## X212551_at -5.027304e-02 -0.036321054 -0.0401903952 -0.0130713219
## X212554_at -7.965112e-02 0.073421980 0.0484090678 0.0287233137
## X212661_x_at -2.488029e-03 0.013082601 -0.0288350600 0.0002143931
## X213068_at 1.165274e-01 -0.061503516 0.0017833373 -0.0183319773
## X213629_x_at -6.550875e-03 -0.039253440 0.0430389647 -0.0323852858
## X214414_x_at 4.608436e-02 0.045028713 0.0227388593 0.0814977374
## X214421_x_at -1.872823e-02 -0.008259356 0.0315170750 0.0284040548
## X214710_s_at 1.733817e-01 -0.213961496 0.1498713614 0.1497198033
## X215138_s_at 1.107870e-02 -0.043402365 0.0445270743 -0.0137172301
## X215330_at -5.163822e-02 0.030196594 -0.0053554920 -0.0101296375
## X215768_at -1.365547e-02 0.017793090 0.0361590944 0.0065047306
## X216025_x_at -3.204113e-02 0.009856905 0.0504153097 0.0335638429
## X216661_x_at -6.446055e-02 -0.031431147 -0.0019186493 0.0349360982
## X216782_at -1.494595e-03 -0.111351119 -0.0474651098 -0.0021192155
## X217165_x_at -1.506723e-02 -0.050137084 -0.0069929585 -0.0097946824
## X217319_x_at -1.301409e-01 -0.106110166 0.0714280355 -0.1430098107
## X217414_x_at 1.729316e-02 -0.009213670 -0.0259894085 0.0122223015
## X217521_at -7.525421e-02 0.012729423 -0.0124846352 -0.0640686831
## X218002_s_at -2.934762e-01 0.197011338 0.0125827706 0.0278780048
## X218061_at -9.418410e-03 0.010238973 -0.0608422398 0.0746029486
## X219485_s_at -2.069179e-02 -0.079644306 0.1811847683 0.0385215613
## X219787_s_at -3.345305e-02 0.002516397 -0.1885129143 -0.1127973666
## X220017_x_at -4.590598e-02 0.005093765 0.0388202706 0.0186825860
## X220114_s_at -7.525067e-02 -0.028271929 -0.3342328679 0.2796795064
## X220116_at 3.041720e-02 -0.123592994 -0.0806993011 0.1235901218
## X220148_at -7.340924e-02 0.076557239 0.0528873255 0.1613026918
## X220491_at -5.891886e-02 -0.032299425 -0.0149236456 0.1341200002
## X220496_at 1.662163e-01 -0.073070398 0.1698492021 -0.1142619631
## X36829_at -7.964809e-02 0.059797594 0.0848630912 -0.0763605323
## PC77 PC78 PC79 PC80
## X200606_at 1.403637e-01 0.0053484958 0.0675006752 -0.030910811
## X200734_s_at 1.055917e-02 -0.0059043495 -0.0191681413 0.013037863
## X200882_s_at 6.219490e-02 -0.1566615293 -0.1494001136 -0.035815448
## X200910_at -1.019764e-01 0.1027077110 0.1986933634 -0.101752017
## X200954_at 5.204833e-02 -0.0347958769 -0.0614813479 -0.085782107
## X201128_s_at -5.737268e-02 0.1946129663 0.2400217961 0.141491164
## X201184_s_at 3.373747e-05 -0.0687553832 0.0354945993 -0.003433662
## X201293_x_at -1.073749e-02 0.0146702348 -0.0250720341 -0.028218337
## X201398_s_at -7.676017e-02 -0.0192584433 -0.1039274299 -0.015691949
## X201441_at 3.216403e-02 -0.1439620696 -0.0093604847 -0.026529371
## X201453_x_at 1.823550e-01 -0.0988453245 -0.0381177457 -0.072253083
## X201516_at 1.616579e-02 0.1148798574 -0.0227230961 0.101004715
## X201527_at -1.071946e-01 -0.0724145449 0.0266403701 0.072643480
## X201531_at -2.976234e-01 -0.0703095285 -0.0612676995 0.080470657
## X201577_at -5.883225e-02 0.0675591655 0.1005940266 0.078199925
## X201584_s_at 1.512536e-01 -0.1081559219 -0.0012681439 0.027140892
## X201656_at -1.093192e-01 -0.0058907222 0.0819219868 0.012788970
## X202541_at 1.973899e-02 0.0559407125 -0.0987751378 -0.032156934
## X202737_s_at -1.040251e-02 -0.0547606953 -0.0534170409 -0.033513308
## X202861_at 1.425643e-02 -0.0082622470 -0.1558568967 0.049009137
## X202940_at 2.222706e-03 0.0063495961 -0.0378810198 0.016555562
## X202963_at 6.247554e-03 0.0794762544 0.0550590317 -0.014314347
## X203316_s_at -4.114898e-02 -0.0110025838 -0.0334130929 0.059775354
## X203554_x_at 1.250434e-01 -0.0176655868 -0.0054352846 -0.058912711
## X203755_at -5.410035e-03 -0.0406162009 -0.0474372508 -0.375327267
## X204018_x_at -1.234105e-02 0.0197329077 -0.0459457840 0.030228496
## X204301_at -1.440614e-02 -0.0050683762 -0.0514960422 0.026266692
## X204428_s_at -3.323067e-02 0.1559580642 0.2360202602 -0.097663648
## X204641_at 8.525482e-03 0.2090140109 -0.1269575387 0.181284874
## X204977_at -6.599060e-02 -0.0611542354 -0.0993574198 0.015580408
## X205019_s_at 6.455012e-02 -0.0109640867 -0.0832617577 0.082279468
## X205086_s_at -6.690693e-02 0.0284570026 0.0133946437 0.016706469
## X205298_s_at -4.007838e-03 -0.0335813532 -0.0096987001 -0.023164689
## X205306_x_at 8.626840e-02 -0.0029688683 0.1222658135 0.023358071
## X205392_s_at -1.769353e-01 0.0976977383 -0.1520427659 -0.280584982
## X205440_s_at -2.981419e-02 0.0458874204 0.0768710830 -0.040090446
## X205531_s_at -2.995274e-03 -0.1503944974 -0.0296818022 0.122741108
## X205554_s_at 9.160109e-02 -0.0061183999 0.1292996344 0.082895531
## X205740_s_at -2.222540e-02 0.0522767972 0.0691276244 -0.038241185
## X205819_at 1.859654e-01 -0.0452506632 0.0684988807 0.108618146
## X205858_at 2.540227e-03 0.0709459812 0.0180173060 -0.008506744
## X205866_at 1.054721e-01 0.0044326521 0.0247054110 0.269538188
## X205890_s_at -1.279218e-01 0.0337530881 -0.0799005389 -0.031603608
## X205911_at 2.034246e-01 -0.1902039060 0.0234623122 -0.039775882
## X206380_s_at -4.014682e-02 -0.0912121475 -0.0745450186 -0.244300614
## X206453_s_at 5.767352e-02 0.1329410629 -0.1129354908 0.103932054
## X206643_at 6.992905e-02 0.0035199089 0.0078412557 0.009747343
## X206680_at 2.346007e-02 0.0114914200 0.0603089785 0.170698951
## X207076_s_at -1.438376e-01 -0.0290918163 0.2330834640 -0.039765989
## X207218_at 1.320239e-01 0.0311233684 0.0603061472 0.117389598
## X207262_at -1.517435e-01 -0.0630713233 -0.0005667426 -0.160867377
## X207330_at -1.649078e-02 -0.0058751319 0.0369544568 0.016975483
## X207609_s_at -1.204147e-01 -0.0685586300 -0.2295791504 -0.101944419
## X207804_s_at 5.803614e-03 -0.1627243578 -0.0375090025 0.113595380
## X207828_s_at -1.617678e-02 0.2389879834 -0.0807030941 0.117830083
## X207995_s_at -1.215462e-01 -0.1680760834 -0.1563931088 0.219734411
## X208079_s_at -5.678357e-02 0.1993878341 -0.1939805099 0.084523529
## X208147_s_at -2.239852e-02 0.0925807828 0.1770911309 -0.058603584
## X208816_x_at 1.226772e-01 0.1643891129 -0.0750553715 0.086271507
## X209189_at 3.771004e-01 -0.0007821416 0.0525737285 -0.071729489
## X209219_at -2.922523e-01 0.0905542897 0.0664883875 0.018892311
## X209335_at -9.515296e-02 -0.0977803546 -0.0239648113 -0.163413279
## X209365_s_at -2.093782e-01 0.0368376515 -0.0803481917 0.235625774
## X209447_at 6.738835e-02 0.1407448332 -0.0415952381 0.081949954
## X209458_x_at 1.584779e-02 -0.0203300883 -0.0178949802 0.013658199
## X209821_at 3.529494e-03 -0.0744724109 -0.0787497376 -0.009652678
## X209825_s_at 1.200000e-01 0.0217891277 0.0431951934 0.005034929
## X210095_s_at 4.294971e-02 0.0701410519 -0.1361520097 -0.001280589
## X210481_s_at 7.072785e-05 0.1858298929 0.1670129814 -0.199579029
## X210909_x_at -8.961188e-03 -0.0827450905 0.0579019109 0.114522325
## X211023_at 2.910778e-02 -0.1121950485 -0.0300531689 -0.043809200
## X211378_x_at 4.540345e-02 -0.0204391303 0.0090539090 0.014446284
## X211628_x_at 2.627794e-02 0.0772399621 0.0605720293 -0.009439349
## X211699_x_at 5.664211e-03 0.0013479490 0.0339251130 0.029115265
## X211745_x_at -1.333556e-02 -0.0149775041 -0.0053492328 0.016723682
## X211765_x_at -7.621166e-04 0.0037918602 -0.0311672546 -0.000640129
## X211978_x_at -6.374406e-03 -0.0201611642 -0.0393561504 -0.033171130
## X212149_at 2.107661e-02 -0.0067584014 -0.0017392447 0.069315784
## X212551_at 8.001871e-02 -0.1208242763 -0.0358349137 0.064752129
## X212554_at -3.290285e-02 -0.0549062656 0.0508251659 0.033164871
## X212661_x_at -1.480363e-02 0.0483840433 -0.0275368492 -0.009848818
## X213068_at 6.702221e-02 -0.0293512168 -0.0247434409 -0.036511144
## X213629_x_at 3.005498e-02 0.0906882200 -0.0018579561 0.018328213
## X214414_x_at -3.178007e-02 -0.0411390069 -0.0237963312 -0.084804247
## X214421_x_at 8.995487e-03 -0.0082348630 0.0183273486 -0.006822364
## X214710_s_at -1.867072e-02 -0.0607476419 0.0080189512 -0.084210311
## X215138_s_at -3.303794e-02 -0.0202529564 0.0118440704 0.026344361
## X215330_at 4.173337e-03 0.0059011054 0.0130698575 -0.018378068
## X215768_at 3.224968e-02 -0.0180169107 0.0759291861 0.002108803
## X216025_x_at 3.371592e-02 -0.0180685595 0.0066775179 -0.025605385
## X216661_x_at -1.043346e-02 0.0188370734 -0.0154214210 -0.014851537
## X216782_at -2.384672e-02 -0.0213205283 -0.0249793728 0.014528437
## X217165_x_at -3.211325e-02 0.0399038266 -0.0078367460 -0.055092991
## X217319_x_at -5.130011e-02 0.0823786324 -0.1764437570 0.102597572
## X217414_x_at -4.376803e-03 -0.0014312992 -0.0299734997 -0.032499616
## X217521_at -1.135824e-02 0.0124853344 -0.0376031137 -0.084210113
## X218002_s_at -2.216884e-01 -0.0100736775 0.2362016190 0.013587002
## X218061_at 1.366091e-01 -0.0606665202 -0.0289857174 -0.017403334
## X219485_s_at -4.074088e-02 0.0887879927 0.0407049025 -0.045590910
## X219787_s_at -1.691994e-01 -0.4538522882 0.3204301700 0.136881345
## X220017_x_at 1.701036e-02 -0.0192084968 0.0106889850 -0.016534614
## X220114_s_at 2.689321e-02 0.2377776686 0.1616720333 0.011165928
## X220116_at -7.861611e-02 0.0749814976 -0.0621724046 0.031505275
## X220148_at -1.770651e-01 -0.0430307711 -0.1633672272 0.022131074
## X220491_at 7.145895e-02 -0.0518842426 -0.0266904389 -0.015089608
## X220496_at 6.180819e-02 0.1222163909 -0.0698194642 -0.233169722
## X36829_at 4.900426e-02 -0.0130773305 0.1578777490 -0.055376450
## PC81 PC82 PC83 PC84
## X200606_at -4.061609e-02 -0.0129481453 -0.043164864 -0.0304131835
## X200734_s_at -5.826989e-02 -0.0263671416 -0.021385701 0.0860605066
## X200882_s_at 1.458692e-02 0.0088182305 0.108558453 -0.2366399358
## X200910_at -5.029942e-02 0.1473563341 -0.050823641 0.4363597374
## X200954_at -1.772865e-02 -0.0171483477 0.025562618 -0.0742344737
## X201128_s_at 6.937416e-02 0.0774398958 0.092055287 -0.1651062979
## X201184_s_at -1.234508e-02 -0.0568588209 -0.031400667 0.0012854681
## X201293_x_at 1.708744e-02 0.0248674467 -0.009989890 -0.0003538483
## X201398_s_at 2.922790e-02 0.0644315770 0.073129793 -0.0096833276
## X201441_at 1.254968e-01 0.0261318344 0.029755247 -0.1204154064
## X201453_x_at -8.131275e-02 -0.0851797890 0.037208569 0.0411001071
## X201516_at 1.607496e-02 0.0213522454 -0.026013497 -0.0198294280
## X201527_at 3.669497e-02 -0.0173115866 -0.060782906 0.0425411737
## X201531_at 5.204964e-02 0.0979194030 -0.079083536 0.1362113406
## X201577_at -2.319147e-01 -0.1707587985 0.040459037 -0.0136757921
## X201584_s_at 4.388941e-02 -0.0461631139 0.076762669 0.0441111484
## X201656_at 9.260052e-02 0.0238551705 0.076059490 -0.0591346598
## X202541_at 2.702552e-03 0.0710832449 -0.024100981 0.0197644373
## X202737_s_at -5.465390e-02 0.0210628829 -0.007502223 0.0297122228
## X202861_at 9.467346e-02 -0.1785914317 0.066882220 -0.0411331831
## X202940_at 3.544347e-02 -0.0026183194 -0.011508146 -0.0072768106
## X202963_at -8.971539e-02 -0.0757334643 0.017158209 -0.0976421928
## X203316_s_at 3.073336e-02 0.0896242489 -0.122746280 -0.0646911789
## X203554_x_at -1.077531e-01 0.2771863265 0.134223018 -0.2186413028
## X203755_at 3.803510e-01 0.0175931883 0.029083050 0.1941094927
## X204018_x_at 1.599965e-02 -0.0281057897 0.010053983 -0.0011750692
## X204301_at 2.430359e-02 -0.0242537988 -0.006368082 -0.0146646635
## X204428_s_at -3.871419e-01 0.2270562281 -0.081772606 -0.0015557060
## X204641_at -4.397141e-02 -0.3192293001 0.170408661 0.1437725014
## X204977_at 3.386970e-03 0.0159218362 0.015449887 0.0231307866
## X205019_s_at 1.453851e-01 0.4668761924 0.038786618 0.0751620640
## X205086_s_at -7.802548e-03 0.0852406059 -0.013204856 -0.0232494057
## X205298_s_at 9.960626e-05 0.0232085738 -0.027438518 0.0110334409
## X205306_x_at 1.177378e-01 0.0479298606 -0.070558405 -0.0404100516
## X205392_s_at -1.786505e-01 0.0172989960 -0.047449774 -0.0513213672
## X205440_s_at 5.688318e-02 0.0018333860 0.011609069 0.0151607058
## X205531_s_at 1.270358e-01 0.1433291463 0.064402774 -0.0906251336
## X205554_s_at 1.908956e-02 -0.0301553365 0.215960676 0.2548723304
## X205740_s_at -8.099022e-02 -0.0717850319 0.026148312 0.0004876573
## X205819_at -1.240330e-01 0.0821754734 0.113579863 -0.0047936568
## X205858_at 6.596625e-02 -0.0063327026 0.045532549 -0.0334322334
## X205866_at 1.521245e-02 -0.0231206908 0.228410489 0.2117855698
## X205890_s_at 6.849342e-02 0.0673921169 0.036512721 0.0363594915
## X205911_at -9.715140e-03 -0.0896413501 -0.196362399 0.1696537197
## X206380_s_at 1.039946e-01 -0.0819262141 0.034799819 0.0765025860
## X206453_s_at 2.063076e-02 -0.0429955240 -0.111507137 0.1184777967
## X206643_at 5.410817e-02 -0.0916222183 -0.023021681 -0.0281598879
## X206680_at 3.909436e-02 -0.0778251430 -0.243223711 -0.1110661328
## X207076_s_at -1.283464e-01 -0.1203177382 -0.083083808 0.0302315340
## X207218_at 9.891495e-02 0.0459177186 -0.139423833 -0.0150753165
## X207262_at 1.063894e-01 -0.0434773184 -0.024262646 -0.0511497909
## X207330_at 1.908843e-02 -0.0024566936 -0.004289917 -0.0330054500
## X207609_s_at -2.074488e-01 0.1239888094 0.221241075 -0.0545109348
## X207804_s_at -1.648870e-01 0.0548322440 -0.049697415 0.1839088233
## X207828_s_at -3.015681e-02 0.0260854119 -0.386568749 0.0307290256
## X207995_s_at -1.675513e-01 -0.0150391923 -0.021739094 -0.1394157294
## X208079_s_at -3.294516e-02 0.0144962494 -0.027251529 0.0747115540
## X208147_s_at -4.889597e-02 0.1322726551 0.030190095 -0.0128810306
## X208816_x_at -2.784684e-02 0.0391341661 -0.087285316 0.0344035904
## X209189_at -6.377021e-02 -0.0589318741 0.110486118 -0.1019989250
## X209219_at -2.308438e-02 -0.0429085061 0.090847733 -0.0635128567
## X209335_at -8.049813e-02 -0.2454372463 -0.039628138 -0.0654416922
## X209365_s_at 2.451916e-01 0.2126311159 -0.098834768 -0.0773510843
## X209447_at -2.457932e-02 -0.0179346975 -0.027955464 -0.0825698243
## X209458_x_at 5.460986e-03 0.0220974477 -0.021631438 -0.0185316019
## X209821_at -2.197613e-02 0.0636058955 -0.015929105 0.0165169816
## X209825_s_at -2.972059e-02 -0.0605810375 0.016503786 -0.1730572489
## X210095_s_at -1.764909e-01 -0.0008830485 -0.034704365 -0.0048177330
## X210481_s_at 8.165753e-02 -0.0215696103 0.149160321 0.0353594410
## X210909_x_at 8.794455e-02 -0.0330582710 0.038490957 0.0151717775
## X211023_at 2.689423e-02 0.0106444598 -0.013945876 0.0415902677
## X211378_x_at 7.013461e-02 0.0155389595 -0.022444208 0.0250918449
## X211628_x_at -6.012415e-02 -0.0249613411 0.066723063 -0.0441174871
## X211699_x_at -4.097989e-02 0.0118799278 -0.024993416 0.0456945323
## X211745_x_at -1.604826e-02 -0.0269170527 -0.015334367 0.0161494336
## X211765_x_at 9.907661e-03 0.0461105321 0.047923521 -0.0174296836
## X211978_x_at -2.583002e-02 0.0446220869 -0.026910386 0.0239393722
## X212149_at -2.385687e-02 -0.0462693276 -0.071108700 0.0242875610
## X212551_at -3.416217e-02 0.0442366030 -0.076146304 -0.1028832974
## X212554_at 2.253423e-02 -0.0355235054 -0.016002301 0.1103168024
## X212661_x_at 2.604964e-02 -0.0221621345 -0.023588895 -0.0199736694
## X213068_at -6.070929e-02 0.0262407012 -0.006264249 0.0576988334
## X213629_x_at 3.913122e-03 0.0305833171 0.009930497 -0.0411438834
## X214414_x_at 2.195719e-02 0.0488917609 0.051401150 -0.0072607061
## X214421_x_at 2.638472e-02 -0.0226957829 -0.022920269 0.0232907664
## X214710_s_at -1.575388e-01 0.2189779507 0.076702121 -0.1656487525
## X215138_s_at 6.093843e-04 -0.0202400829 0.027589324 -0.0139752562
## X215330_at 8.445946e-03 0.0122345467 -0.006084997 -0.0098997420
## X215768_at 7.602323e-02 0.0216937772 0.005661944 -0.0009602625
## X216025_x_at 1.310302e-02 -0.0246430182 -0.002692389 0.0256313221
## X216661_x_at 3.948979e-02 -0.0092742402 0.017998446 0.0256272254
## X216782_at -3.696531e-02 -0.0416968327 0.018780677 -0.0027259039
## X217165_x_at 6.203779e-03 -0.0224922775 0.036248111 0.0323773646
## X217319_x_at 1.592357e-02 -0.1351207381 0.104365160 -0.0724486784
## X217414_x_at 2.254726e-02 -0.0010161976 -0.007392371 -0.0312379288
## X217521_at -1.535731e-01 0.0475850903 0.078627928 0.1183805865
## X218002_s_at 5.942099e-02 -0.1049593107 0.151762523 -0.1569804114
## X218061_at 9.612050e-03 0.0135255023 -0.036343924 0.0737955035
## X219485_s_at 8.979419e-02 -0.0363668871 0.035235287 0.0128690984
## X219787_s_at -3.647401e-02 -0.1081395269 -0.152466158 -0.0468520906
## X220017_x_at 5.959258e-03 0.0056680071 -0.004257383 -0.0112974547
## X220114_s_at 2.075038e-01 -0.0515655705 0.135321601 -0.2318474983
## X220116_at -1.534403e-02 -0.0209816181 -0.027262452 0.0537804889
## X220148_at -1.537117e-01 -0.0558986980 0.079132080 0.0022927441
## X220491_at -2.465176e-02 0.0303827342 -0.039991921 -0.0525381118
## X220496_at 6.135990e-02 -0.1059421386 -0.431296519 -0.2032376106
## X36829_at -8.684161e-02 0.1495040534 -0.128999495 -0.0024299670
## PC85 PC86 PC87 PC88
## X200606_at 6.635945e-02 0.0753740206 0.0377510782 0.0229322751
## X200734_s_at -2.107838e-02 0.0182079236 0.0197108013 0.0037723779
## X200882_s_at 8.315010e-02 0.2054097192 0.1095127454 0.0766800322
## X200910_at 6.242599e-02 -0.3375202427 -0.3729586984 0.0205132947
## X200954_at -2.344866e-03 -0.0124567020 -0.0249129825 -0.0119537496
## X201128_s_at 4.408050e-02 -0.0630835048 -0.0564834981 0.0677692633
## X201184_s_at 1.191315e-02 0.0214081814 0.0620906004 -0.0029983485
## X201293_x_at 4.837683e-03 -0.0308649852 0.0064127527 -0.0026536025
## X201398_s_at 4.445255e-02 0.0289657103 0.0133634470 0.0860957858
## X201441_at 5.363134e-03 0.0003546922 -0.0348769449 -0.0050682930
## X201453_x_at 3.619228e-02 -0.0274488767 -0.0836743880 -0.0426351791
## X201516_at -5.430843e-02 -0.0542147934 0.1354629823 0.0440901015
## X201527_at -4.579464e-02 0.0250141057 -0.0016772751 -0.0378367285
## X201531_at -1.990684e-01 0.0410370465 0.0764498825 -0.0123092349
## X201577_at 2.309599e-02 0.1603003347 -0.1600038681 0.0294397741
## X201584_s_at -5.371560e-02 0.0729366905 -0.0857078251 0.0458795890
## X201656_at 2.108314e-02 0.0541959781 0.0321591241 0.0448809942
## X202541_at 9.086568e-05 -0.0042445841 -0.0481391787 -0.0321152667
## X202737_s_at -1.894075e-02 -0.0547991060 0.1207227739 -0.0298891582
## X202861_at -1.340401e-01 -0.1937838623 -0.1288683050 0.1313390189
## X202940_at 2.228365e-02 -0.0375762581 -0.0012512210 0.0012016197
## X202963_at -2.073254e-03 -0.0174513211 0.0665803363 0.0103653265
## X203316_s_at -3.282688e-01 -0.1164664345 0.1366888966 -0.2325859757
## X203554_x_at -1.181091e-01 -0.0083737259 -0.0572242717 0.0664009744
## X203755_at -1.591023e-01 0.1002403631 -0.0889425257 -0.0067074142
## X204018_x_at -2.134085e-02 0.0224062224 -0.0106603063 0.0275598681
## X204301_at -2.052696e-02 -0.0529662721 0.0412866676 0.0005256299
## X204428_s_at -3.413599e-01 0.0678254371 0.1235431266 -0.0357314414
## X204641_at -1.190924e-02 0.1073756252 -0.0541395336 -0.0126184645
## X204977_at 2.850501e-02 0.0067208101 -0.0332456027 0.0051506638
## X205019_s_at -2.627830e-02 0.0519708375 0.1558099818 0.4782683152
## X205086_s_at -2.297017e-02 0.0219192608 -0.0151218610 -0.0488811906
## X205298_s_at 3.625210e-02 0.0085657439 -0.0113306102 0.0183409480
## X205306_x_at 7.509948e-03 0.0154604965 -0.0467380684 0.0091903956
## X205392_s_at 1.699653e-01 -0.0086853074 -0.1228576600 -0.0055231695
## X205440_s_at 2.698425e-02 0.0422439101 0.0169189128 -0.0042798074
## X205531_s_at -5.467394e-02 -0.1161100339 0.0104743340 0.0110641465
## X205554_s_at -9.602861e-02 0.1250451548 -0.0249682773 0.0721483718
## X205740_s_at 9.259289e-02 0.0081709054 0.0226095266 -0.0034452865
## X205819_at 2.141719e-02 -0.0197689381 -0.0683796655 0.0608982165
## X205858_at -2.646310e-02 -0.0046775556 -0.0341353867 0.0618056286
## X205866_at 1.062974e-01 -0.0594532057 0.2730830492 -0.1034755306
## X205890_s_at 5.213689e-03 -0.0066982790 -0.0389715387 -0.0059159371
## X205911_at -6.360461e-02 0.0537494639 0.0559896600 -0.1287640919
## X206380_s_at 4.769194e-03 0.0730302031 0.1023462699 -0.0669689262
## X206453_s_at -6.828300e-02 -0.1911348916 -0.0784509525 -0.0214768734
## X206643_at -5.254105e-03 0.0622598888 0.0481029847 -0.1630587379
## X206680_at -1.994775e-02 -0.1587863626 -0.0788716263 -0.0359859003
## X207076_s_at 1.564779e-01 0.0930838623 0.0962831691 0.0781619659
## X207218_at -7.590378e-02 -0.1200635267 -0.0831921392 -0.0560345297
## X207262_at 7.513794e-03 0.1224734503 -0.0219143963 -0.0110290044
## X207330_at 2.573291e-02 -0.0023282142 -0.0180850408 -0.0062451529
## X207609_s_at 1.540913e-01 -0.2682197524 -0.0853861972 -0.0671886162
## X207804_s_at 2.413883e-02 0.0842828600 0.1514850976 -0.0331500877
## X207828_s_at 2.736862e-01 0.1782143869 0.1087253575 0.2818533045
## X207995_s_at -7.523460e-02 0.1208335074 -0.2816709907 0.1100517697
## X208079_s_at -1.210327e-01 0.0002860493 0.0198566833 -0.0635563240
## X208147_s_at 1.013899e-01 0.1502508823 -0.1496796708 0.0136777980
## X208816_x_at -1.070354e-02 0.0107349898 -0.0938213731 -0.0017553289
## X209189_at 1.548389e-01 0.0229514609 -0.1505776378 -0.0036687234
## X209219_at -1.017497e-01 -0.0244916988 0.1288288844 0.0539598740
## X209335_at 5.985849e-02 -0.2679640267 0.2319615331 0.1460528596
## X209365_s_at 3.799997e-01 0.0938851721 -0.1031519885 -0.3553553466
## X209447_at -2.183848e-02 0.0104217449 0.0696029100 -0.0802950768
## X209458_x_at -2.805054e-02 0.0395290551 0.0182249788 -0.0236853405
## X209821_at -2.243325e-02 -0.0532955498 -0.0262333169 -0.0092298226
## X209825_s_at 3.126452e-02 -0.0598811552 0.1147459340 -0.0524379184
## X210095_s_at -1.086480e-01 -0.0262643728 -0.0561322230 -0.0871269042
## X210481_s_at 4.695083e-02 -0.0247015919 0.2483575930 -0.0822928478
## X210909_x_at 1.675991e-02 0.0018202102 0.0190841272 0.0011218320
## X211023_at 4.557877e-02 0.0457901237 -0.0293650799 0.0379374955
## X211378_x_at 2.596094e-02 0.0434471472 0.0153032924 -0.0631377267
## X211628_x_at 2.567986e-02 0.0138491023 0.0162924464 0.1013959237
## X211699_x_at -6.305833e-02 -0.0183092668 0.0652606233 -0.0359391341
## X211745_x_at 9.703986e-03 -0.0034487757 0.0303207505 -0.0391934465
## X211765_x_at 3.865110e-02 0.0457821799 0.0006694953 -0.0090995541
## X211978_x_at -2.647939e-02 -0.0507738781 0.0419351338 -0.0604050909
## X212149_at -3.083733e-02 -0.0107504447 0.1172969233 -0.0304675031
## X212551_at -1.390678e-01 -0.0313886546 -0.0472030818 0.0579683042
## X212554_at 3.994306e-02 0.0264866858 -0.0315694618 -0.1729874129
## X212661_x_at -2.306793e-02 -0.0183865571 -0.0077506088 0.0658646845
## X213068_at -1.661617e-02 0.1324838113 -0.0522536715 -0.0308233401
## X213629_x_at -3.747860e-03 0.0340564740 -0.0905178628 -0.0149609828
## X214414_x_at 1.109956e-01 -0.0144342083 -0.0615210585 0.0280474267
## X214421_x_at -2.960307e-02 -0.0306762432 0.0022825526 0.0506393865
## X214710_s_at 6.945486e-02 -0.1042478203 0.0347249167 -0.3315464320
## X215138_s_at 1.008356e-02 -0.0059162740 -0.0098895072 0.0284257522
## X215330_at 1.006085e-02 -0.0102321067 0.0393836599 0.0387632945
## X215768_at -4.659433e-02 0.0188938867 -0.0167040291 -0.0108606942
## X216025_x_at 1.314905e-02 -0.0315677043 0.0492794989 0.0041422734
## X216661_x_at 1.676979e-02 -0.0205671939 0.0409306929 -0.0196152137
## X216782_at -1.027804e-03 -0.0368105119 -0.0360827861 -0.0072493240
## X217165_x_at 1.857383e-02 0.0050100011 0.0010026472 0.0004879428
## X217319_x_at 2.403220e-02 0.0671473259 -0.0547075046 -0.0450291575
## X217414_x_at 9.667170e-03 0.0202873188 -0.0241005591 0.0418604103
## X217521_at 8.976716e-02 -0.0612708420 -0.0489035917 0.1743563349
## X218002_s_at -2.668258e-01 0.2744339140 -0.2465642090 -0.0304228683
## X218061_at 5.707678e-02 -0.0682516377 -0.0928658463 -0.0145682843
## X219485_s_at 1.370798e-01 0.0224022379 0.0946969512 0.0958531688
## X219787_s_at 1.141256e-01 -0.2148841885 -0.0379815945 0.1589264776
## X220017_x_at -1.360741e-02 0.0241403198 0.0014149277 0.0086342142
## X220114_s_at 1.472956e-02 -0.3398312222 0.0193479119 0.0442452249
## X220116_at 2.935494e-02 0.0035723179 -0.0946002413 0.0431273008
## X220148_at 1.017033e-04 -0.0394619685 0.1401822239 0.0635049834
## X220491_at -2.212877e-02 0.0540299443 -0.0172343517 0.0487236555
## X220496_at -8.454708e-02 -0.0055725413 -0.0630317855 0.0908948823
## X36829_at 1.838784e-01 0.1228838221 0.0680963602 -0.1842368226
## PC89 PC90 PC91 PC92
## X200606_at 0.0399000367 -0.0367982426 -0.0107205384 -0.0250511551
## X200734_s_at 0.0151831571 -0.0198641864 0.0158085875 0.0120951841
## X200882_s_at -0.0352927598 0.0702602432 -0.0238324518 -0.0328918654
## X200910_at 0.0095278822 0.0494522100 -0.0659671583 0.1830628219
## X200954_at 0.0593688562 0.0003469234 0.0342100142 -0.0186690332
## X201128_s_at -0.0044841253 -0.0035813582 -0.0683362677 -0.0477914813
## X201184_s_at -0.0575169930 -0.0160417585 0.0131054364 0.0240551680
## X201293_x_at 0.0121621797 0.0078569058 -0.0756959737 0.0099691124
## X201398_s_at 0.0727459328 0.0677640614 0.0249380533 0.0230871692
## X201441_at -0.0233463264 0.0001113171 0.0705565371 0.0261920978
## X201453_x_at -0.0257673511 -0.0740122368 -0.0840601237 0.0386504592
## X201516_at 0.0927523369 0.0314191179 0.0048695770 -0.0292000247
## X201527_at -0.0623053484 0.0355438378 0.0354761899 -0.0408047653
## X201531_at 0.0324565337 0.1076778415 0.0549407205 0.0064752697
## X201577_at -0.0655411849 0.0101203547 0.0415629578 -0.0092138453
## X201584_s_at 0.0051175672 0.0173478884 0.0466727573 -0.0647511657
## X201656_at -0.0291270325 -0.0032243714 -0.0463535381 0.0031687538
## X202541_at -0.0055862900 0.0447907211 0.0397360856 0.0376337749
## X202737_s_at -0.0289948059 0.0001267764 -0.0772278372 -0.0032450013
## X202861_at 0.1252362535 -0.3469254569 -0.1897073078 -0.0778600114
## X202940_at 0.0355567282 -0.0188759575 0.0103115802 0.0068849419
## X202963_at -0.0534359076 -0.1434328516 -0.0157580037 -0.0198959424
## X203316_s_at -0.1039749557 -0.0818774669 0.0084392263 -0.1604371262
## X203554_x_at 0.2894324648 0.3602016538 -0.2319486916 0.1900425349
## X203755_at -0.1009644634 0.0484464497 -0.1188619058 0.0064700373
## X204018_x_at 0.0028913760 -0.0757002760 -0.0266076452 0.1386561448
## X204301_at 0.0100051279 -0.0013379914 0.0292015459 0.0096656636
## X204428_s_at 0.0404605590 -0.0589247290 -0.0675680000 -0.0272964698
## X204641_at -0.1937178573 0.0832692271 0.1613403500 0.1167462347
## X204977_at -0.0414297519 0.0153338004 0.0350960586 -0.0315100724
## X205019_s_at -0.3309581584 -0.1495040046 0.1406867613 0.0480903314
## X205086_s_at -0.0334941555 -0.0108390361 0.0503264073 -0.0057835710
## X205298_s_at -0.0150161046 0.0127031616 0.0511518845 0.0326930586
## X205306_x_at -0.0816988497 0.0434962331 -0.0401937182 0.0042323183
## X205392_s_at -0.0456346159 -0.0529184957 -0.1991847207 0.0969019263
## X205440_s_at 0.0510906270 0.0114388004 -0.0644634678 0.0240109703
## X205531_s_at 0.2628419230 0.1308195708 -0.0049727017 -0.0669332493
## X205554_s_at 0.3164478857 -0.1130504841 0.4784887968 0.0351098381
## X205740_s_at -0.0091899569 -0.0090520683 -0.0401427728 -0.0213317265
## X205819_at 0.0347654865 -0.0553459504 0.0878881232 -0.0003267572
## X205858_at 0.0113536732 0.0100500209 0.0058630279 -0.0114125266
## X205866_at -0.1585038769 0.1413978015 -0.4198813559 -0.0112298334
## X205890_s_at 0.0038031597 0.0082552838 0.0280329146 0.0464186010
## X205911_at 0.1431209216 0.0502450657 -0.0203549970 0.0235510037
## X206380_s_at 0.0323009527 -0.0347764914 -0.0598300438 -0.0096565791
## X206453_s_at -0.0494185157 0.1107941752 0.0090430196 -0.0601512068
## X206643_at 0.0608912102 -0.0607826350 0.1436586896 0.3615080747
## X206680_at -0.0825443400 0.0397995831 -0.0393447773 -0.0269212690
## X207076_s_at -0.1817719084 -0.1142574040 -0.0408321560 0.0683967795
## X207218_at 0.0140368753 0.0253843847 -0.0204547313 -0.0762557211
## X207262_at -0.0831795682 0.0128648234 -0.0074397250 0.0051954284
## X207330_at -0.0221339698 -0.0163175219 -0.0173940451 -0.0052070453
## X207609_s_at 0.1781863326 0.0770245704 0.1417780874 0.0637188331
## X207804_s_at 0.0494099107 -0.0088484948 -0.0794773521 -0.0339573649
## X207828_s_at 0.2812818766 -0.0070480769 -0.0510136553 -0.1185851033
## X207995_s_at -0.1830866479 0.1336286787 0.0170879695 -0.0065342451
## X208079_s_at -0.0169501851 -0.0482574100 0.0809441346 0.0093646039
## X208147_s_at -0.0684598311 -0.0195807477 0.0827782965 0.0005709221
## X208816_x_at 0.0239504666 -0.0344742344 -0.0181372942 0.0086809217
## X209189_at -0.0188856099 -0.1353952854 -0.0650362377 -0.0360089627
## X209219_at 0.1080478463 -0.0702258902 0.0211018649 0.0843463711
## X209335_at -0.0884069738 0.1729576520 0.1684345583 0.0634938551
## X209365_s_at 0.1456867666 -0.2133294610 -0.0446976743 0.0855617052
## X209447_at 0.0379433562 0.0305182720 0.0230328740 -0.0215968409
## X209458_x_at -0.0466310362 -0.0164473069 -0.0185021058 0.0855907401
## X209821_at -0.0639079971 -0.0502436403 -0.0200489515 -0.0091371121
## X209825_s_at 0.0878437119 0.0240566376 0.0178105017 -0.0133617790
## X210095_s_at -0.0090314095 0.0341363952 0.0777875460 0.0072827439
## X210481_s_at 0.1797800564 -0.1297106431 -0.0085505158 -0.0381529203
## X210909_x_at -0.0942961092 0.0382961502 0.0508230627 -0.0288701718
## X211023_at -0.0011074965 0.0140270243 0.0522728791 0.0515780176
## X211378_x_at 0.0334954651 0.0980548214 0.0743905581 0.0261969925
## X211628_x_at 0.0280134736 -0.0168570277 0.0265945908 -0.0066628838
## X211699_x_at -0.0301314819 0.0310715265 -0.0598402523 0.1655260493
## X211745_x_at -0.0261004109 0.0307840019 -0.0651401736 -0.0042438219
## X211765_x_at -0.0609574237 0.0576324259 -0.0314564656 0.0303495216
## X211978_x_at -0.0073541797 -0.0447584215 0.0954926942 -0.1692558740
## X212149_at 0.0059224180 -0.0363279316 -0.0648492077 -0.0063579347
## X212551_at -0.0510388608 -0.1038492862 -0.0395023580 0.2804058382
## X212554_at -0.0072508607 0.2147351651 0.0826109448 -0.3721586535
## X212661_x_at 0.0302221879 -0.0508455256 -0.0091103907 -0.0228606080
## X213068_at 0.0338713920 -0.0448009100 -0.0415396792 -0.0235145509
## X213629_x_at -0.0007744003 0.0186512441 0.0506950987 -0.0469918715
## X214414_x_at 0.0779000993 0.0737174214 0.1421438446 -0.4008136289
## X214421_x_at -0.0007444318 -0.0382687421 0.0171392698 0.0203062898
## X214710_s_at -0.2320476427 -0.3088086925 0.1788783553 -0.1269248641
## X215138_s_at -0.0095960371 -0.0262123606 -0.0130483600 -0.0109836869
## X215330_at 0.0138546620 -0.0454274301 0.0148958530 0.0243756657
## X215768_at -0.0040941427 -0.0224845950 -0.0145232367 0.0130602234
## X216025_x_at 0.0178270165 -0.0216386779 -0.0054163644 -0.0371648349
## X216661_x_at -0.0219882776 -0.0429158650 -0.0492188762 0.0412391633
## X216782_at 0.0042734000 0.0198235452 0.0001898705 -0.0121974275
## X217165_x_at -0.0046438567 0.0380972750 -0.0159797186 -0.0189466452
## X217319_x_at -0.0134609758 0.0792789421 -0.0370204378 0.0267412800
## X217414_x_at -0.0341111958 -0.0372822472 0.0662426924 0.0140443973
## X217521_at -0.0651175281 0.0342301192 -0.1295068951 -0.3685846017
## X218002_s_at 0.0621140724 0.0377759592 -0.1438399410 -0.1116494252
## X218061_at -0.0582988606 -0.0492189489 0.0049837321 -0.0141336040
## X219485_s_at 0.0003733278 0.0934931191 -0.0045058297 0.0302135377
## X219787_s_at 0.1149202253 -0.0860547705 0.0114361928 0.0306631070
## X220017_x_at 0.0244095586 -0.0096193595 0.0442564179 -0.0069540667
## X220114_s_at -0.1537081274 0.1665651240 0.1214908435 0.0084627365
## X220116_at 0.0164334100 -0.0355881730 -0.0166638989 -0.0293931858
## X220148_at 0.0836548078 -0.0056430743 0.0083965200 0.0254734139
## X220491_at -0.0193456293 -0.0578341907 -0.0924476751 -0.0231108201
## X220496_at 0.0192854408 0.0590881916 0.1253137402 -0.0202114669
## X36829_at -0.1532874420 0.3826614483 0.1654383659 0.1142757096
## PC93 PC94 PC95 PC96
## X200606_at -0.0037080580 0.002931146 0.0073162405 0.0013335631
## X200734_s_at 0.0241697415 -0.002546764 0.0051229788 0.0216440317
## X200882_s_at 0.0566724232 0.005247511 0.1166702989 -0.0214000030
## X200910_at 0.1078153636 -0.057072680 -0.0414245705 -0.0281922583
## X200954_at 0.0104259803 -0.029327547 0.0171267743 -0.0258425804
## X201128_s_at 0.0216148635 -0.006727081 0.0617852582 -0.0119352261
## X201184_s_at -0.0697846120 0.008049956 -0.0212127108 0.0131868058
## X201293_x_at 0.0015716162 -0.054320638 0.0543905046 0.2178556628
## X201398_s_at 0.0303812675 -0.015213325 0.0011621707 -0.0110136511
## X201441_at 0.0234471306 0.030516336 -0.0068131418 -0.0317762543
## X201453_x_at 0.0291385612 0.049042304 0.0048700904 -0.0171335203
## X201516_at 0.0381651848 0.011680645 0.0343041238 0.0217833901
## X201527_at -0.0366732606 0.003377076 -0.0049415348 0.0360212266
## X201531_at 0.0271709232 -0.005612387 -0.0148960408 0.0070558240
## X201577_at -0.0156401395 -0.038120223 -0.0696223540 -0.0325020593
## X201584_s_at 0.0584622532 -0.003959099 -0.0064905155 -0.0348562849
## X201656_at 0.0573464360 0.008899364 0.0194690885 0.0092304557
## X202541_at 0.0199806448 0.016898959 -0.0056824143 0.0289609399
## X202737_s_at 0.0131965898 -0.034554086 0.0310151118 -0.0025880206
## X202861_at -0.1405567525 -0.128978346 -0.0475354259 0.0519487757
## X202940_at -0.0099152617 0.015753663 0.0202168759 0.0245501324
## X202963_at 0.0179529962 -0.040302838 -0.0684963315 -0.0487158150
## X203316_s_at -0.1189690642 0.088166263 -0.0668436407 0.1251517395
## X203554_x_at -0.4142142901 -0.019035593 -0.0745682557 0.0329328864
## X203755_at 0.0605664299 0.056121971 -0.0283380022 -0.0235540304
## X204018_x_at 0.0242211739 -0.023978554 0.1513728580 0.0290447417
## X204301_at 0.0094596311 0.035281087 0.0033281634 -0.0173192850
## X204428_s_at -0.0152890023 -0.005364313 -0.0730327769 0.0292551690
## X204641_at -0.1902403604 0.098694263 0.0119729503 -0.0037080404
## X204977_at 0.0309921148 0.028425989 0.0556261176 -0.0212397242
## X205019_s_at -0.1403479267 -0.215985693 -0.0551149372 -0.0089081695
## X205086_s_at -0.0230787170 -0.012751209 0.0054509194 0.0074982754
## X205298_s_at 0.0347664643 0.001767441 -0.0027987804 -0.0069085185
## X205306_x_at -0.0201644477 -0.028685426 0.0028754716 -0.0248476275
## X205392_s_at 0.0221485311 -0.140850825 -0.0586347075 -0.0315805921
## X205440_s_at 0.0078217416 -0.005449192 0.0023440640 -0.0219565891
## X205531_s_at 0.3122047677 -0.043936100 0.1106398154 -0.0519323437
## X205554_s_at -0.0264593175 0.114395958 0.1055662067 0.0564844485
## X205740_s_at -0.0256974391 -0.017351013 -0.0142907030 0.0100157307
## X205819_at -0.0223605025 -0.025359892 -0.0193845141 0.0179524721
## X205858_at 0.0202107201 -0.019971097 -0.0018039494 0.0072267841
## X205866_at 0.1544065650 -0.026741271 -0.1868958704 -0.0508629743
## X205890_s_at -0.0106637064 0.007208595 0.0070719903 -0.0343063135
## X205911_at 0.0303283580 0.042087165 0.0297651807 0.0134248205
## X206380_s_at 0.0449270903 -0.005386979 0.0191666456 -0.0137259220
## X206453_s_at 0.0090998435 0.008068960 0.0097583041 -0.0008960113
## X206643_at 0.0311637748 -0.343066775 -0.2696802020 -0.0391368543
## X206680_at -0.0020252658 0.042771916 0.0088398012 0.0110867640
## X207076_s_at -0.1976495372 0.002527841 -0.0686675871 0.0715358491
## X207218_at 0.0039920730 -0.010002238 -0.0091141840 0.0092638197
## X207262_at 0.0149427355 0.049553470 0.0541245373 -0.0418351644
## X207330_at 0.0296853850 -0.016112965 -0.0018631504 -0.0061481280
## X207609_s_at 0.0343308492 -0.030112052 0.0188155664 0.0095567937
## X207804_s_at -0.0054369699 0.030989478 -0.0001396465 0.0244458643
## X207828_s_at 0.3350223215 -0.101993567 0.0103931665 -0.0514779484
## X207995_s_at 0.0529475011 -0.050032595 -0.0344704018 -0.0313877719
## X208079_s_at 0.0348892560 0.024276081 0.0016485497 0.0272523657
## X208147_s_at -0.0101233937 0.070991036 0.0536867450 0.0100065569
## X208816_x_at -0.0257541865 0.062070959 -0.0373801102 0.0272287089
## X209189_at 0.0378895853 -0.061301786 0.0207078050 -0.0209041902
## X209219_at 0.0449795173 0.003995550 -0.0420969530 -0.0341117329
## X209335_at -0.0326611088 0.024676606 0.0300986744 0.0447184723
## X209365_s_at -0.3052725299 0.211522263 0.0244361603 0.0141539994
## X209447_at 0.0091574324 0.016233602 0.0165488898 -0.0058024661
## X209458_x_at -0.0514557664 0.020045533 0.2759118655 0.0799616173
## X209821_at 0.0040536113 -0.011412209 0.0063947629 0.0063210827
## X209825_s_at -0.0686009506 0.027105236 -0.0222323734 -0.0050432165
## X210095_s_at 0.0107831658 -0.012103334 0.0086660146 0.0311776803
## X210481_s_at -0.0697695253 0.027368851 0.0002446403 0.0063674475
## X210909_x_at -0.0305889640 0.037683088 -0.0532267510 0.0151777705
## X211023_at 0.0043949743 -0.002556336 -0.0003145939 -0.0240972185
## X211378_x_at 0.0999051481 0.003198095 -0.0153105738 0.2200275507
## X211628_x_at 0.0017236848 -0.016428282 0.0493812111 0.0009611605
## X211699_x_at -0.0135911135 -0.070700612 0.3155328938 -0.2733674473
## X211745_x_at -0.0205165871 -0.053739997 0.0207921373 -0.0601901917
## X211765_x_at -0.0081448658 -0.009962897 0.0131752050 0.2675239014
## X211978_x_at -0.1609347667 0.054765447 -0.0734905840 -0.7647649929
## X212149_at 0.0075724890 0.067477490 -0.0523539125 0.0239451764
## X212551_at 0.1618515910 0.373786623 -0.1761512804 -0.0462988099
## X212554_at -0.2190049418 -0.505880995 0.1604586396 0.0748334770
## X212661_x_at 0.0217761656 0.063170909 0.0530881166 0.0522057715
## X213068_at 0.0444354411 0.046685733 0.0025984955 -0.0051711707
## X213629_x_at 0.0370050929 -0.036821741 0.0341899254 -0.1251225516
## X214414_x_at -0.0010271138 0.092276458 -0.6178356480 0.0374643426
## X214421_x_at 0.0114613127 0.006010949 0.0134811761 -0.0450138328
## X214710_s_at 0.2874947779 -0.098628941 0.1090781734 0.0597594345
## X215138_s_at 0.0120524612 0.041186206 -0.0034139572 -0.0151786553
## X215330_at -0.0047893326 0.007739021 -0.0063566948 -0.0040846209
## X215768_at -0.0295789731 -0.009826095 0.0109409114 -0.0072159084
## X216025_x_at -0.0126584566 -0.005357637 0.0552695084 0.0006012069
## X216661_x_at 0.0078694787 -0.057383200 -0.0179518823 0.0561956930
## X216782_at -0.0019809295 -0.027636218 0.0150001249 0.0158598720
## X217165_x_at -0.0094736472 0.011282403 -0.0469461405 0.0888895334
## X217319_x_at 0.0215866495 -0.040209564 -0.0505353325 -0.0321856799
## X217414_x_at 0.0406584696 0.035309064 -0.1696730298 0.1895255502
## X217521_at -0.1021476488 0.413714947 0.2681395255 0.0799506028
## X218002_s_at 0.1943358105 -0.007041353 0.0101693885 -0.0421098755
## X218061_at -0.0041328697 0.034602486 -0.0100824887 0.0003418623
## X219485_s_at -0.0386733092 0.058662336 -0.0402806554 -0.0416972037
## X219787_s_at -0.0805998671 -0.029403294 0.0020924518 0.0130078264
## X220017_x_at -0.0447830317 -0.008186752 -0.0484223388 0.0030741263
## X220114_s_at 0.1181645827 0.054034990 0.0435103576 -0.0255653466
## X220116_at -0.0129674140 -0.060414362 0.0162985199 0.0017366372
## X220148_at 0.0479340100 0.060213709 -0.0005906209 -0.0038337977
## X220491_at -0.0003820425 -0.064455923 0.0167594543 -0.0199680148
## X220496_at -0.1158105585 0.009427170 0.0313479211 0.0255766846
## X36829_at 0.0978149974 0.142599021 -0.0203595637 -0.0345791782
## PC97 PC98 PC99 PC100
## X200606_at -0.0012160120 -7.021018e-03 -0.0212450649 -0.0036149103
## X200734_s_at 0.0198787220 2.762482e-03 -0.0070438842 -0.0133002909
## X200882_s_at 0.0019257615 -2.465032e-02 0.0066809253 0.0049123473
## X200910_at 0.0011056575 7.080333e-03 -0.0371286031 -0.0311640983
## X200954_at -0.0050989321 -6.676702e-03 -0.0062701363 0.0190060224
## X201128_s_at -0.0118720846 3.677117e-02 0.0130872861 0.0002830752
## X201184_s_at -0.0086872821 1.071922e-04 -0.0073024730 0.0148971356
## X201293_x_at 0.1219339289 -2.728860e-01 0.2385030249 -0.0238681435
## X201398_s_at 0.0032153227 7.972125e-03 -0.0066558587 0.0006780067
## X201441_at 0.0051120947 1.490712e-02 0.0355671908 -0.0129351808
## X201453_x_at 0.0375332109 6.348506e-03 -0.0286426742 0.0081498466
## X201516_at 0.0093889606 -7.965002e-03 -0.0086565532 0.0018621509
## X201527_at -0.0123594198 -1.813216e-02 -0.0046423213 -0.0005261941
## X201531_at 0.0138319883 -4.480263e-02 -0.0402693811 0.0142156170
## X201577_at -0.0421336346 -2.774237e-02 0.0138135432 0.0043235350
## X201584_s_at 0.0035019740 2.660195e-03 0.0337084720 0.0226687008
## X201656_at 0.0057602818 7.978886e-03 -0.0220202881 -0.0004319256
## X202541_at 0.0027497254 -1.155873e-03 0.0176100115 -0.0039946451
## X202737_s_at -0.0085998076 2.260910e-02 -0.0091321997 -0.0022257829
## X202861_at -0.1016644653 -2.220394e-02 -0.0137702408 0.0123245371
## X202940_at 0.0100049601 1.723662e-02 0.0072159237 0.0090982242
## X202963_at -0.0062083728 6.657451e-05 0.0015909348 0.0125526829
## X203316_s_at -0.0056986974 -1.502001e-02 -0.0191061417 0.0116063422
## X203554_x_at 0.0001950745 3.293019e-02 -0.0544921465 0.0148979700
## X203755_at -0.0148277608 -1.411123e-02 0.0149602875 -0.0139697366
## X204018_x_at 0.0703148718 2.170112e-01 -0.3324480675 -0.2111281418
## X204301_at -0.0008754295 -7.219810e-04 -0.0009963207 0.0100787885
## X204428_s_at -0.0251462460 5.598427e-02 -0.0177409805 -0.0113533616
## X204641_at 0.0165092643 -9.616001e-03 0.0117222141 0.0314327801
## X204977_at 0.0201741764 -3.101978e-03 0.0039816599 -0.0025452549
## X205019_s_at -0.0365352137 -8.477464e-03 0.0074118935 -0.0006301506
## X205086_s_at -0.0079377959 5.008215e-03 0.0078176168 -0.0160316306
## X205298_s_at 0.0031412412 -1.284030e-02 0.0071578547 -0.0026185049
## X205306_x_at 0.0168414671 1.942180e-02 -0.0010294273 -0.0001318124
## X205392_s_at -0.0471891239 -4.772354e-02 -0.0462083153 0.0727050197
## X205440_s_at 0.0220406601 3.295719e-03 -0.0279904340 0.0063049071
## X205531_s_at 0.0393347478 3.013377e-02 0.0369597564 0.0007478539
## X205554_s_at 0.0238983914 -2.392467e-02 0.0470137456 -0.0381444486
## X205740_s_at -0.0067107214 -3.030434e-02 -0.0071100157 0.0184766554
## X205819_at 0.0008199361 1.138753e-02 0.0188464143 -0.0165552483
## X205858_at 0.0008045977 -4.814418e-03 0.0229609876 -0.0136734891
## X205866_at 0.0303121165 2.170619e-02 -0.0764356686 0.0369443170
## X205890_s_at 0.0021156989 1.927141e-02 0.0030302359 0.0092105723
## X205911_at 0.0224761226 1.505027e-02 -0.0116329728 -0.0054097309
## X206380_s_at 0.0125584855 -3.118003e-02 -0.0240329854 0.0121533255
## X206453_s_at 0.0188348986 -8.154143e-03 -0.0118886210 -0.0036008986
## X206643_at 0.0365110113 6.190816e-03 0.0346993525 -0.0229440651
## X206680_at 0.0034843957 -1.510460e-02 0.0146106201 0.0082470244
## X207076_s_at -0.0324422381 -3.672855e-02 -0.0324948113 0.0040231857
## X207218_at 0.0031177466 -9.163988e-03 0.0424456936 0.0078740720
## X207262_at -0.0261538556 1.679300e-03 -0.0212424240 -0.0114267815
## X207330_at 0.0104697433 1.009952e-02 -0.0047655763 0.0091659180
## X207609_s_at -0.0065406835 3.923271e-02 -0.0055563626 -0.0051928614
## X207804_s_at 0.0372934123 1.882136e-02 0.0084916326 0.0032684969
## X207828_s_at -0.0306460637 2.759022e-02 0.0400204508 -0.0254601155
## X207995_s_at -0.0237163381 4.864936e-02 0.0294285203 -0.0139872587
## X208079_s_at -0.0122615499 -2.205666e-02 -0.0037710792 -0.0163405977
## X208147_s_at -0.0267823541 -7.036270e-04 0.0403726197 0.0035049411
## X208816_x_at -0.0141908483 -3.371888e-03 0.0353480126 -0.0112364085
## X209189_at -0.0090941705 1.871089e-02 0.0245599577 0.0053501715
## X209219_at -0.0102724411 -1.276000e-02 0.0058718239 -0.0012116763
## X209335_at 0.0129395876 9.738006e-03 -0.0124106551 -0.0409307367
## X209365_s_at -0.0042668541 5.242230e-03 0.0254616738 0.0216982919
## X209447_at -0.0451000478 8.072696e-03 0.0034024726 0.0159425255
## X209458_x_at -0.0708355857 -1.545169e-02 -0.0791190366 -0.1034383576
## X209821_at -0.0308367452 -3.059679e-03 -0.0011536431 -0.0134707162
## X209825_s_at -0.0040131783 -2.225123e-02 0.0206005542 0.0189530280
## X210095_s_at -0.0175492121 -1.436404e-02 0.0423382934 0.0152047855
## X210481_s_at 0.0082151673 -4.420485e-02 -0.0165003108 -0.0051445817
## X210909_x_at 0.0022384164 -1.109142e-02 -0.0024683841 0.0222216401
## X211023_at 0.0072831839 4.346428e-03 0.0085284054 -0.0006802351
## X211378_x_at -0.7182482062 6.766335e-02 -0.2879599768 0.1735514221
## X211628_x_at -0.0325943896 1.423594e-02 -0.0115147306 -0.0049174100
## X211699_x_at -0.0732561782 -3.066387e-01 0.3679072760 0.4833260240
## X211745_x_at -0.1034687315 1.185315e-02 0.1205993394 -0.6389679172
## X211765_x_at 0.1352862729 -2.189113e-01 0.1456697889 -0.1797070464
## X211978_x_at -0.0614920515 2.040047e-01 -0.0484850402 -0.0429383030
## X212149_at 0.0154439580 -1.396152e-02 -0.0197851647 0.0049967405
## X212551_at -0.0292565418 -4.075662e-02 0.0471202427 -0.0213285537
## X212554_at 0.0571113045 8.928728e-02 -0.0396765025 0.0514258726
## X212661_x_at 0.5014452859 2.540907e-01 -0.0386582784 0.0903637134
## X213068_at 0.0081063630 3.675977e-03 -0.0060730324 -0.0119965265
## X213629_x_at 0.1541671680 -4.130052e-01 -0.4672931898 0.0214913745
## X214414_x_at 0.0007501775 -2.477192e-01 0.1097213481 0.0276212954
## X214421_x_at 0.0205307751 -1.331624e-01 0.0562200054 0.0286766900
## X214710_s_at 0.0042863146 1.113569e-02 0.0285250498 -0.0078392696
## X215138_s_at -0.0161373599 1.993401e-02 0.0059520495 -0.0012998762
## X215330_at -0.0090512163 -4.650644e-04 0.0012410746 -0.0103600102
## X215768_at 0.0100686064 -1.155870e-02 0.0009544194 -0.0024950998
## X216025_x_at -0.1256151273 -2.648928e-03 -0.0128735426 0.0069700874
## X216661_x_at 0.1167608261 1.774788e-01 0.0303642854 0.0189710786
## X216782_at -0.0144186505 -7.845801e-03 0.0016716908 0.0165788920
## X217165_x_at -0.1646931951 4.233465e-01 0.4934466584 -0.0099580611
## X217319_x_at -0.0124438777 -1.050741e-02 0.0153720830 0.0058669199
## X217414_x_at 0.1741407932 3.384706e-01 -0.1763090973 0.4426381589
## X217521_at -0.0366832302 1.843650e-02 -0.0277155817 0.0320357614
## X218002_s_at 0.0018952423 3.487433e-02 0.0214681440 -0.0070237393
## X218061_at -0.0091162581 -9.894406e-03 -0.0151890555 -0.0172939948
## X219485_s_at -0.0142331672 3.162705e-03 0.0027596276 0.0056526189
## X219787_s_at 0.0040502266 -2.168243e-02 -0.0273585959 0.0227494720
## X220017_x_at -0.0049434909 -2.985177e-02 -0.0786067725 -0.0569100099
## X220114_s_at -0.0393874369 9.194464e-03 -0.0063144744 -0.0284353964
## X220116_at -0.0100679220 1.246658e-02 0.0364833934 0.0190974388
## X220148_at -0.0130534210 -6.677273e-02 -0.0475179042 -0.0001121838
## X220491_at 0.0015127619 -1.564899e-02 -0.0174765497 0.0123981558
## X220496_at 0.0090817581 -1.713598e-03 0.0137509970 -0.0100086585
## X36829_at 0.1129457389 3.747673e-02 -0.0145167712 -0.0260651323
## PC101 PC102 PC103 PC104
## X200606_at 1.025515e-02 6.081447e-05 0.0091105925 0.0028181932
## X200734_s_at -8.774430e-03 2.342636e-02 -0.0030067348 -0.0049283375
## X200882_s_at 2.561125e-02 6.429871e-03 0.0214645929 0.0087164042
## X200910_at -1.487288e-02 1.579370e-02 -0.0524730879 -0.0207538759
## X200954_at -8.299056e-03 -1.839044e-02 -0.0190205933 0.0007555616
## X201128_s_at -3.027223e-03 -1.080815e-02 0.0088780103 0.0139348847
## X201184_s_at 1.584403e-03 -5.264399e-03 0.0069229374 -0.0076745809
## X201293_x_at -3.514823e-01 8.569586e-02 0.2144114150 -0.2663647860
## X201398_s_at 5.276962e-03 -3.856367e-03 -0.0230512123 -0.0160937417
## X201441_at -2.117041e-02 1.388232e-02 0.0026879947 -0.0112312352
## X201453_x_at -6.016641e-04 3.470602e-03 -0.0023780604 -0.0128786809
## X201516_at 1.005223e-03 5.994647e-03 0.0057250493 -0.0009119440
## X201527_at 1.287278e-02 -9.158469e-03 0.0006650190 0.0072831567
## X201531_at -1.072274e-02 -2.079960e-02 -0.0105752148 -0.0137736752
## X201577_at 1.630683e-02 -1.165533e-02 -0.0100616960 -0.0111631721
## X201584_s_at -2.208670e-02 3.512770e-02 0.0291857206 0.0170825993
## X201656_at -1.326793e-02 1.108065e-02 -0.0102225429 -0.0155607968
## X202541_at -5.612264e-03 1.046765e-02 -0.0006541913 -0.0137001879
## X202737_s_at 6.629754e-05 -3.108653e-02 -0.0245386418 0.0236739951
## X202861_at 7.905559e-03 1.283584e-02 -0.0192793048 0.0215569331
## X202940_at 8.416817e-04 -1.586793e-03 0.0085349737 0.0053253529
## X202963_at 1.226479e-02 2.994926e-03 -0.0131915431 0.0061511426
## X203316_s_at 4.528594e-02 -2.856089e-02 0.0394187734 0.0249934821
## X203554_x_at 2.301061e-02 1.381822e-02 0.0162487558 0.0081752461
## X203755_at 1.763273e-02 -1.216805e-02 -0.0172532686 0.0052947971
## X204018_x_at -1.274800e-01 -4.974238e-01 0.3875903973 -0.2905003326
## X204301_at -1.024054e-02 1.124747e-02 0.0018578892 0.0054207631
## X204428_s_at 7.886014e-03 2.032369e-02 -0.0049504964 -0.0211337570
## X204641_at 1.603097e-02 1.629783e-02 0.0201345164 -0.0164836943
## X204977_at -3.259619e-03 1.262750e-02 0.0085007787 0.0171360795
## X205019_s_at 3.764672e-02 -3.639781e-03 0.0083330842 0.0014957089
## X205086_s_at -6.246104e-03 -1.750965e-02 -0.0023891509 -0.0007417609
## X205298_s_at 7.235383e-03 8.851125e-03 0.0097757428 0.0207595415
## X205306_x_at 1.510973e-02 -9.582949e-03 0.0103729841 0.0030923737
## X205392_s_at 3.501912e-02 7.950632e-03 0.0037260083 0.0174443816
## X205440_s_at -4.872393e-03 -6.900164e-03 -0.0238762978 0.0115914235
## X205531_s_at -2.841732e-02 1.194676e-02 -0.0002007559 0.0147057308
## X205554_s_at -2.773120e-02 4.737289e-02 0.0308155502 0.0390950814
## X205740_s_at 5.925163e-03 5.081665e-03 0.0106021122 0.0008006139
## X205819_at -8.664193e-04 -6.948540e-03 0.0131768010 -0.0137628932
## X205858_at -5.945086e-03 4.593212e-03 0.0025664833 -0.0062457281
## X205866_at -6.949993e-03 -1.834311e-02 -0.0663141651 -0.0531298135
## X205890_s_at 6.612587e-04 -5.506500e-03 -0.0013768094 -0.0149091059
## X205911_at -1.380883e-02 -1.756324e-02 0.0044581847 -0.0063263093
## X206380_s_at 1.510875e-04 -7.183954e-03 0.0013090493 0.0204750923
## X206453_s_at -1.162078e-02 -2.158488e-02 -0.0061611477 -0.0194711080
## X206643_at 4.538173e-02 1.166329e-02 -0.0613772241 -0.0648814575
## X206680_at -1.530154e-02 2.608029e-02 0.0007483321 -0.0079183457
## X207076_s_at 2.142279e-02 -1.713634e-02 0.0183711242 -0.0025328259
## X207218_at 5.995705e-03 -8.855363e-03 0.0186329008 0.0241590424
## X207262_at 1.203630e-02 2.401513e-02 0.0316918190 -0.0072158297
## X207330_at -5.758214e-03 -3.340091e-03 -0.0063576299 -0.0059534018
## X207609_s_at 3.713778e-02 -5.097425e-04 -0.0173221727 0.0139297732
## X207804_s_at -9.597802e-03 3.917898e-03 0.0053340532 0.0070652786
## X207828_s_at -3.701235e-02 1.797556e-02 -0.0300530104 -0.0056413586
## X207995_s_at 2.462807e-02 8.330631e-03 0.0047693454 -0.0269545987
## X208079_s_at -6.346076e-03 9.824334e-03 0.0038952745 0.0148553439
## X208147_s_at 1.919099e-02 3.209128e-02 0.0170477749 0.0015500110
## X208816_x_at 6.072134e-03 1.188786e-02 0.0112739879 0.0075295239
## X209189_at 1.236281e-02 -1.154380e-02 -0.0024237070 0.0012675059
## X209219_at -2.477004e-02 2.725348e-02 -0.0087862552 -0.0025633358
## X209335_at 1.575892e-02 1.809862e-02 0.0244492543 0.0074720833
## X209365_s_at 2.067884e-02 -2.076739e-02 -0.0050318128 0.0276980083
## X209447_at -2.131018e-02 -1.689858e-02 0.0026765454 -0.0171772802
## X209458_x_at 5.921283e-02 4.073337e-01 -0.4266272987 -0.4807159847
## X209821_at 1.541016e-02 4.380714e-03 -0.0042427720 -0.0029613756
## X209825_s_at -2.378396e-02 7.107847e-03 -0.0043857962 0.0081554796
## X210095_s_at 4.350265e-03 2.259415e-03 0.0199806741 0.0099307461
## X210481_s_at 3.310366e-03 -1.336460e-02 -0.0170647847 0.0162115818
## X210909_x_at 1.324058e-02 1.690602e-03 0.0069961075 -0.0010543756
## X211023_at -2.130970e-03 6.400386e-03 0.0139211614 0.0098745312
## X211378_x_at 2.167444e-01 6.271972e-03 0.1087311007 0.0979180695
## X211628_x_at -8.504564e-03 -1.161359e-02 0.0123004048 -0.0078719432
## X211699_x_at 1.512750e-01 -1.398290e-01 0.1574561688 0.1403605315
## X211745_x_at 1.474522e-01 1.425540e-01 0.0015557934 0.5033762718
## X211765_x_at -2.449827e-01 -1.166402e-01 -0.1837012973 0.2209570364
## X211978_x_at -2.349035e-01 7.338721e-02 -0.0417876725 -0.0521273517
## X212149_at -1.796630e-03 1.071213e-02 0.0108652100 -0.0078651341
## X212551_at -1.100122e-02 1.251229e-02 0.0072705026 -0.0034139001
## X212554_at -1.024855e-02 -2.719141e-02 -0.0144689523 0.0060602010
## X212661_x_at 6.414704e-01 -6.119728e-02 -0.0842913301 0.0014442989
## X213068_at -1.248146e-02 -2.112050e-03 0.0104305823 -0.0029549639
## X213629_x_at 1.281974e-02 1.239434e-01 0.0411723187 0.1206830902
## X214414_x_at 1.798149e-01 -3.446111e-02 0.1020957264 -0.2303495507
## X214421_x_at 1.073023e-01 -1.468697e-01 -0.1821751428 0.0798634670
## X214710_s_at 3.660084e-03 -3.862701e-02 0.0002614245 -0.0067698922
## X215138_s_at 7.406106e-03 9.063266e-04 0.0043517517 0.0013431519
## X215330_at -4.820014e-03 1.107407e-02 -0.0070340574 0.0011365795
## X215768_at -5.277275e-03 4.479637e-03 0.0091822121 0.0037252387
## X216025_x_at -5.854075e-03 4.547898e-02 -0.2472389009 -0.1863802872
## X216661_x_at 2.337488e-03 5.108687e-01 0.5840487857 0.0438743156
## X216782_at -1.023218e-02 -3.411722e-03 -0.0091641882 0.0057519395
## X217165_x_at -1.978675e-02 -1.252992e-01 -0.0383778277 -0.1022110964
## X217319_x_at -2.133827e-02 -2.188943e-03 -0.0284895625 -0.0095455173
## X217414_x_at -3.950653e-01 1.320043e-01 -0.2143833619 0.3545577215
## X217521_at -3.995654e-02 -1.871883e-02 0.0521933645 0.0603023306
## X218002_s_at -2.766900e-02 1.036833e-02 -0.0108559067 -0.0118045232
## X218061_at 7.029090e-03 -9.175155e-03 0.0137720754 -0.0004569190
## X219485_s_at -1.573289e-02 -8.375809e-03 0.0045709384 -0.0093711482
## X219787_s_at -1.623547e-02 9.950376e-03 0.0169022233 -0.0010246438
## X220017_x_at -1.018019e-01 -4.017026e-01 -0.1260906975 0.0840946582
## X220114_s_at -2.476343e-02 -7.952594e-03 -0.0108047388 -0.0131919363
## X220116_at 1.463648e-03 -3.286046e-03 -0.0014237456 0.0046224012
## X220148_at -7.744504e-03 3.905989e-03 -0.0296379117 0.0055317032
## X220491_at 3.713747e-04 -1.077099e-02 0.0022321140 -0.0012822547
## X220496_at -4.020632e-02 -1.275448e-02 0.0097523019 -0.0044979649
## X36829_at -2.545480e-03 -1.433540e-02 0.0275207806 -0.0325285090
## PC105 PC106 PC107
## X200606_at 0.0141384966 -3.173752e-04 -0.0047718529
## X200734_s_at -0.0072109544 -8.943411e-04 -0.0085031606
## X200882_s_at 0.0228209850 -8.009987e-03 0.0011146388
## X200910_at -0.0123586491 1.985850e-02 0.0146071834
## X200954_at 0.0038426264 -5.014398e-03 0.0031186897
## X201128_s_at 0.0035793248 2.141214e-03 0.0096324850
## X201184_s_at -0.0052920519 -4.204949e-03 -0.0033660003
## X201293_x_at 0.5689902665 5.238936e-02 -0.0141660422
## X201398_s_at -0.0034946009 -7.746084e-03 -0.0063179368
## X201441_at -0.0026912939 1.596573e-02 -0.0038086172
## X201453_x_at -0.0130983408 -6.528008e-03 -0.0172021793
## X201516_at -0.0110071161 1.012175e-02 -0.0147650657
## X201527_at 0.0180159263 1.659077e-02 0.0203634046
## X201531_at -0.0141587654 -5.660626e-03 0.0137568444
## X201577_at 0.0165881419 -1.353545e-02 0.0202976101
## X201584_s_at -0.0086643450 -5.937315e-03 0.0027251955
## X201656_at -0.0115345017 8.777840e-03 -0.0090011505
## X202541_at 0.0016151343 -6.541953e-04 -0.0008420721
## X202737_s_at 0.0071669429 7.074623e-03 -0.0025717283
## X202861_at -0.0457320255 2.411793e-02 0.0118688299
## X202940_at -0.0075297594 5.814267e-03 0.0003257317
## X202963_at -0.0077083884 4.862729e-03 -0.0201703042
## X203316_s_at -0.0086566977 -2.977562e-02 0.0002962471
## X203554_x_at 0.0128649448 -3.129886e-02 -0.0226724876
## X203755_at 0.0036876868 -2.131396e-03 0.0134015113
## X204018_x_at -0.0847001920 -2.025992e-01 -0.0567033169
## X204301_at -0.0023628872 -3.274026e-04 0.0004773867
## X204428_s_at -0.0159912687 -1.162778e-02 -0.0083686017
## X204641_at 0.0170686380 1.051715e-03 0.0029703774
## X204977_at -0.0003285864 4.912496e-03 -0.0153564707
## X205019_s_at 0.0363245549 -1.322754e-02 0.0199602046
## X205086_s_at 0.0052815234 3.806325e-04 -0.0035150691
## X205298_s_at 0.0034398375 4.482786e-05 0.0041034275
## X205306_x_at -0.0055169358 2.001443e-03 -0.0003459100
## X205392_s_at -0.0164258420 6.173971e-03 -0.0014455408
## X205440_s_at 0.0171460578 -6.167055e-03 -0.0029049307
## X205531_s_at -0.0324189527 1.676105e-02 0.0016240365
## X205554_s_at -0.0009243163 -5.460989e-03 0.0165307165
## X205740_s_at -0.0130251497 -4.368949e-03 -0.0022826266
## X205819_at 0.0034501472 -1.656241e-02 -0.0120845730
## X205858_at -0.0090309911 8.296143e-03 0.0087181805
## X205866_at 0.0078480945 3.116808e-02 -0.0136654411
## X205890_s_at 0.0081540521 -4.498092e-03 0.0101811252
## X205911_at -0.0159284088 4.644032e-03 -0.0094641412
## X206380_s_at 0.0091936222 4.786729e-03 -0.0042161275
## X206453_s_at -0.0195102114 1.327856e-04 0.0068931366
## X206643_at 0.0051628450 -1.488118e-02 0.0053536522
## X206680_at -0.0307196908 1.171473e-02 0.0049820059
## X207076_s_at 0.0020162725 4.362413e-03 0.0070872431
## X207218_at 0.0144160036 -9.869937e-03 0.0043340742
## X207262_at 0.0036451901 2.014253e-02 0.0043934976
## X207330_at -0.0035467734 -7.425657e-04 0.0029122115
## X207609_s_at 0.0134670671 8.657426e-03 -0.0045060695
## X207804_s_at 0.0048867028 4.825330e-03 -0.0127268257
## X207828_s_at -0.0356502766 2.193130e-02 -0.0047103735
## X207995_s_at 0.0243750576 -1.248625e-02 0.0072015768
## X208079_s_at 0.0136421604 8.792328e-03 0.0040266527
## X208147_s_at 0.0024884505 2.444419e-04 0.0088631649
## X208816_x_at -0.0113885846 4.836373e-03 0.0143594624
## X209189_at 0.0041049371 1.858806e-02 -0.0080772327
## X209219_at -0.0137845083 4.472285e-03 -0.0012772605
## X209335_at 0.0004247896 5.463047e-03 -0.0157981674
## X209365_s_at 0.0325175838 -3.471367e-02 -0.0120834332
## X209447_at -0.0001862476 -1.148156e-03 -0.0194599466
## X209458_x_at -0.1412345715 2.727034e-01 -0.1339439064
## X209821_at -0.0056869237 8.393984e-03 0.0106824096
## X209825_s_at 0.0043986134 6.972652e-04 -0.0018764148
## X210095_s_at -0.0143296351 1.255001e-02 0.0019836057
## X210481_s_at -0.0043011701 3.621965e-03 -0.0030663677
## X210909_x_at 0.0089960417 1.768969e-02 0.0063086522
## X211023_at -0.0071233708 5.780612e-04 0.0095564516
## X211378_x_at 0.0270946414 3.129704e-02 -0.0554902234
## X211628_x_at -0.0017216069 4.197559e-04 -0.0081618153
## X211699_x_at -0.0875466956 1.846228e-02 0.1274567604
## X211745_x_at 0.2657857083 -2.995427e-02 0.0761207796
## X211765_x_at -0.6338054008 -1.279758e-01 0.0159610952
## X211978_x_at -0.0579509619 7.468700e-03 -0.0530121346
## X212149_at 0.0012628953 1.084556e-02 -0.0009870136
## X212551_at 0.0095182480 -4.272675e-03 0.0404564219
## X212554_at 0.0046756421 -1.629258e-02 -0.0394585786
## X212661_x_at 0.0949883446 3.132663e-02 0.1060873426
## X213068_at 0.0022896238 -9.388732e-04 -0.0073120119
## X213629_x_at 0.0340959810 -2.094348e-02 0.0410548170
## X214414_x_at -0.0977108703 -7.370916e-03 0.0031601729
## X214421_x_at 0.1197220593 -2.421020e-01 -0.7567093073
## X214710_s_at 0.0038887694 3.065540e-03 -0.0033529592
## X215138_s_at -0.0085669310 -2.642369e-03 -0.0021060498
## X215330_at -0.0017683645 -5.786318e-03 -0.0062065237
## X215768_at -0.0063856846 -9.038682e-03 0.0020764398
## X216025_x_at 0.0824806050 -5.476645e-01 0.5518205850
## X216661_x_at -0.2766644878 1.019824e-01 -0.0286047722
## X216782_at -0.0081228731 -6.681847e-03 0.0005629721
## X217165_x_at -0.0253159829 1.757004e-02 -0.0453314135
## X217319_x_at 0.0140252774 -2.581676e-03 0.0110160986
## X217414_x_at 0.1586415878 -5.225162e-02 -0.0098447471
## X217521_at 0.0121099545 9.135071e-03 -0.0186905788
## X218002_s_at 0.0071299482 -1.927116e-02 -0.0050476488
## X218061_at -0.0009611825 -1.521922e-03 0.0007402766
## X219485_s_at -0.0089404807 9.519873e-03 0.0034025253
## X219787_s_at -0.0321251328 1.281155e-03 0.0112278632
## X220017_x_at 0.0485595205 6.906024e-01 0.2151335600
## X220114_s_at 0.0009208273 1.375561e-02 0.0059771021
## X220116_at -0.0093548569 1.448669e-03 -0.0030211851
## X220148_at 0.0152940429 -6.682830e-03 0.0079548644
## X220491_at -0.0123981294 -3.053200e-03 0.0034992155
## X220496_at -0.0358627203 -1.636107e-02 0.0119518308
## X36829_at 0.0330900403 -3.192015e-02 -0.0036244144head(pca$x,10)## PC1 PC2 PC3 PC4 PC5 PC6
## [1,] -10.326345 -0.5358933 -0.85018614 -1.5798462 -2.1365948 -0.92347359
## [2,] -9.270718 -0.3738642 -1.19409466 0.3900056 -0.4880585 -2.29206786
## [3,] -6.867369 0.4905576 -2.95344583 1.8530531 -0.1457931 -0.05156924
## [4,] -5.707984 1.2936060 -0.52069468 -0.4012827 -0.7957212 -0.76397503
## [5,] -8.966921 -0.2065264 -0.43592230 -0.7322418 -0.7008323 -3.77179634
## [6,] -4.554075 0.7228484 -1.75920750 -2.2381909 0.9604392 -0.21363859
## [7,] -6.718720 -0.2241320 0.60889667 -1.1804637 -0.9338937 -3.50666914
## [8,] 5.141880 -0.9518191 -1.27668285 0.5290658 0.4724239 -4.79830871
## [9,] -4.793937 3.9842413 1.62636210 0.2625670 2.3875969 -2.01114847
## [10,] -1.921854 2.8522465 -0.06641188 0.6528331 0.9767865 -2.97544120
## PC7 PC8 PC9 PC10 PC11 PC12
## [1,] 1.06271047 0.9717575 1.15295852 -0.65090795 2.0712205 -1.4594160
## [2,] 0.69887369 -1.0777511 0.14738873 -0.46104278 0.4738329 -0.8927690
## [3,] -0.78337740 -2.8514524 0.21105505 1.33545895 -0.1940618 -1.2262134
## [4,] -1.18692879 -3.1438672 -1.75929830 -0.08899578 1.4554168 -1.7817422
## [5,] 1.48651367 -1.4249037 1.13167730 -0.26379665 0.7709250 -1.0636166
## [6,] -0.07004835 -1.2419294 -0.05252534 1.37866278 1.0182711 -0.1770103
## [7,] 0.50550656 -0.4496345 0.09203877 0.35059283 -0.8225382 2.0093427
## [8,] -1.06105642 -1.5437607 -1.98136970 0.80187420 0.4995061 0.6348397
## [9,] 2.61207042 -1.3184933 -0.42310546 2.59788992 0.6484478 0.6939858
## [10,] 0.37997377 1.2193847 -0.86239213 -0.66788776 -1.2804628 -1.5579733
## PC13 PC14 PC15 PC16 PC17 PC18
## [1,] 1.66762115 -2.1680543 0.77270846 0.83514548 1.93874904 -0.10553779
## [2,] -0.05364545 0.5194720 -1.17062263 0.29755410 -0.34379751 -1.24722767
## [3,] 0.80639927 0.4091659 1.04120310 0.06503789 -0.17180976 -0.05980891
## [4,] 0.41677724 1.0360031 0.82320325 -0.17202640 -0.91932468 0.75898323
## [5,] 0.95418810 0.5891828 -0.37309819 2.31660581 0.71187757 0.44438322
## [6,] -0.01146802 0.2380826 0.06713987 0.09691731 -0.60761809 1.02339775
## [7,] 1.84043094 -0.1349447 -0.11115392 1.62378961 -0.08853476 0.10359422
## [8,] 0.91628093 1.8587107 -0.85102408 0.16865240 1.18498680 0.85275547
## [9,] 0.91892236 0.8827272 1.27046706 0.94917434 -0.78628155 0.10317055
## [10,] -0.45924425 -0.1325645 0.01255481 0.13412130 -0.52571215 0.21150479
## PC19 PC20 PC21 PC22 PC23 PC24
## [1,] -1.3779294 0.2843865 1.3647101 0.32210465 0.5425061 1.3724960
## [2,] -1.2361787 -1.0500552 0.3707780 0.23842917 -0.7286256 1.1349109
## [3,] -0.8510043 -0.3267122 0.3237274 0.97580315 0.5680062 0.1660229
## [4,] -2.2359350 -0.9075508 -0.5110284 1.00615627 1.3648106 -0.1267369
## [5,] -0.8566746 1.1003326 0.4412208 0.55963354 0.8120726 0.2025780
## [6,] -0.7738789 0.8588967 1.1071410 -0.05135004 1.0396590 0.7625462
## [7,] 0.9393150 -0.7812172 -1.2726948 1.22295265 -0.2095566 0.2775146
## [8,] -1.5101936 0.5200972 0.1651629 -0.18873175 0.5662125 -0.2451132
## [9,] -1.9595569 0.2481562 -0.6394514 0.32147140 -0.5996091 0.4878776
## [10,] 1.0013095 0.4366493 0.6726502 1.71194138 -0.4617135 1.0141477
## PC25 PC26 PC27 PC28 PC29 PC30
## [1,] -0.09625107 -2.1106570 0.11847075 -2.2829918 -0.7660476 0.9819877
## [2,] -0.61744320 -0.3493277 -0.55910927 -1.4932028 0.1392939 -1.1056431
## [3,] 0.19899050 -0.8012360 0.24388796 -0.7684000 -0.5410386 -0.3851128
## [4,] -0.35550429 0.4818125 0.14305675 -1.6999726 -0.5515166 0.1727974
## [5,] 0.39675412 1.2815432 -0.38293215 -0.2318344 0.4702747 0.1068615
## [6,] 0.62445677 0.6167389 0.09944243 -0.8564620 0.2581635 -0.6465572
## [7,] 0.06368562 0.8285414 -0.52678998 0.6973972 -1.0064417 1.0174464
## [8,] -0.94364657 -1.3216793 -1.07591182 0.1625969 -0.8671808 -1.1875948
## [9,] 0.38263980 -0.6237896 1.18756621 -0.3208476 0.5111405 0.8844668
## [10,] -0.82965778 0.2153840 -0.47640247 -0.2126745 0.7035566 0.5860783
## PC31 PC32 PC33 PC34 PC35 PC36
## [1,] 1.126723806 1.4044705 -0.7203460 -0.73125837 0.4211467 1.52704485
## [2,] -0.831036494 0.8185781 0.1747740 0.07137357 -0.1905599 0.06920162
## [3,] 1.546178926 -0.2993796 -1.2512686 0.40174933 -0.8033779 -1.26599258
## [4,] 0.355844281 0.3665606 0.2690129 0.18058649 0.4904267 -0.37119025
## [5,] -0.516288632 -0.5991876 -0.4619723 0.97996398 -0.7376247 0.62713825
## [6,] -0.333324588 -0.6465321 0.7939891 -1.12041271 -0.6595941 -0.19376939
## [7,] 0.007919291 0.1693360 0.5499454 -0.25823335 -0.5387352 -0.63652365
## [8,] 0.678460805 -0.5963635 0.5706806 -0.35805618 0.2232631 0.23760133
## [9,] -0.380035731 -0.1198570 -0.4278872 -0.79936346 -0.2796533 0.46409494
## [10,] -0.120075684 0.2307717 0.1562795 -0.14712408 0.7586811 -0.43505124
## PC37 PC38 PC39 PC40 PC41 PC42
## [1,] 0.13565807 -0.658171333 -0.14172858 -1.37584067 -0.78870175 0.4386281
## [2,] 0.11581547 -0.304809462 0.15086810 -0.30155336 0.16217688 -0.1606169
## [3,] 0.11847276 0.114760648 -1.05416473 -0.37637243 0.51281715 -0.4157505
## [4,] -0.61889767 -1.880310058 0.31090428 -0.36396678 0.11544158 0.0778171
## [5,] -0.32912228 0.374562170 0.05259974 -0.26878013 -0.29511251 0.1255561
## [6,] -1.05238323 -0.522811891 0.42467855 0.03861045 0.22923736 -0.1200935
## [7,] 0.06787878 -0.008967677 0.70249913 0.71104605 -0.36375672 0.1497495
## [8,] -0.11514364 0.404104632 -0.14830968 0.46748538 -0.81047869 0.1625222
## [9,] -0.68402157 0.081414402 -0.06636241 0.26832898 0.09085481 0.2378687
## [10,] -0.59988059 0.857493478 -0.19587892 -0.72908106 0.92154559 0.6710479
## PC43 PC44 PC45 PC46 PC47 PC48
## [1,] -0.2640975 0.18470333 -0.43355036 0.6605089541 -0.3250693 -0.6426826
## [2,] -0.1350741 0.25414442 0.29904576 1.0575020059 -0.4437882 -0.1146154
## [3,] -0.3814567 0.02537482 0.92804153 0.0170102048 -0.3510354 -0.6892200
## [4,] -0.8676371 -0.08747261 0.51372908 -0.0217941115 0.8189647 0.4806614
## [5,] -0.3121990 -0.70906525 0.12429132 0.6001970675 0.4435433 -0.4389248
## [6,] -0.4490897 -0.09195095 -0.29636442 -0.0786268952 -0.1620067 -0.4991548
## [7,] -0.1356780 0.45787877 -0.08113356 0.9890040390 -0.5959547 0.2719739
## [8,] -0.3748273 0.08664175 -0.12424465 0.0001826456 -0.2898137 0.2271105
## [9,] -0.3218270 -0.31670294 0.45465210 0.5610309197 0.2423558 -0.3344116
## [10,] -1.5550805 -0.94753427 -0.03475809 0.0254103486 0.4965460 0.7056453
## PC49 PC50 PC51 PC52 PC53 PC54
## [1,] 0.1506915 -0.41645467 -0.14615210 -0.93069269 0.14935023 -0.004464516
## [2,] 0.4608237 0.44475083 -0.32958169 0.08907915 -0.11952232 -0.269133463
## [3,] 0.4167202 -0.31455038 -0.30788785 0.58447185 0.21687598 -0.060677351
## [4,] -0.3639547 0.45098279 0.86289688 0.26749459 0.35367251 -0.241051896
## [5,] -1.0892241 0.97020768 -0.72466680 -0.10433330 0.09994651 0.711946195
## [6,] 0.2111832 0.96286936 0.02482946 0.26615903 -0.22283162 -0.029380846
## [7,] -1.2045867 1.13536822 0.55589486 0.48364615 0.37255586 -0.382303096
## [8,] 0.3203693 0.16491447 -0.09427734 0.63735417 -0.33163732 -0.490725355
## [9,] 0.5208252 -0.08588506 0.02932706 0.17170303 -0.08420172 -1.055120958
## [10,] -0.6922596 -0.46912795 0.17274991 0.25074538 0.02449186 0.367514458
## PC55 PC56 PC57 PC58 PC59 PC60
## [1,] -0.69392825 -0.1478058 -0.281243451 0.178261335 1.31269183 0.01569056
## [2,] -0.52718781 -0.2967731 0.039317113 0.268953910 0.27340220 -0.30057884
## [3,] -0.49819577 0.2919411 -0.323951196 0.014779281 0.29016923 -0.01000121
## [4,] -0.51155965 1.0350656 -0.001460971 0.507025394 0.05706717 -0.32598142
## [5,] 0.03089884 0.3947546 -0.604030156 0.314223850 -0.18185848 -0.07838952
## [6,] -0.41377312 -0.5323914 0.443482316 -0.648966992 -0.45365695 0.42834474
## [7,] -0.58310754 0.4283728 -0.067571791 -0.287621863 0.09394556 -0.23988191
## [8,] 0.11115939 -0.1847305 -0.177225122 0.236350102 -0.34269829 -0.32863304
## [9,] -1.01936529 0.4544185 -0.018824154 -0.118386514 -0.41739853 -0.31308751
## [10,] 0.63887113 -0.4464488 -0.500914085 0.001162789 -0.37031458 0.08477574
## PC61 PC62 PC63 PC64 PC65 PC66
## [1,] -0.22897008 0.2179022 -0.57691201 0.05748826 0.09292750 0.51028091
## [2,] 0.66248403 -0.5404110 -0.55816439 0.21289739 -0.30439545 0.33340431
## [3,] -0.17050834 -0.4880011 -0.21665810 -0.32374074 0.20906494 0.53361586
## [4,] 0.30524045 0.4222763 -0.19202184 0.16707399 -0.79200716 -0.24717012
## [5,] -0.48660692 0.3796941 0.32824802 0.22434914 0.16211606 -0.03287317
## [6,] 0.17510129 -0.1296229 0.13110368 0.22925627 0.45208910 -0.47144391
## [7,] -0.49773133 -0.3675229 0.48073642 0.08440119 0.02305632 -0.58381940
## [8,] 0.32690277 -0.0297661 0.28132972 0.29829639 0.46907826 0.31076076
## [9,] 0.47516025 0.2804918 -0.56116886 -0.84658322 0.19137861 -0.29278239
## [10,] 0.05871293 0.3601038 0.09923455 0.08637058 0.16436359 0.71352249
## PC67 PC68 PC69 PC70 PC71 PC72
## [1,] -0.303525668 -0.243182923 -0.4754937 -0.45796803 0.63005826 0.22304382
## [2,] -0.138483676 -0.062424957 0.1921348 0.52945650 -0.24389688 0.09111790
## [3,] -0.003138967 -0.034831179 0.3509528 -0.28696154 -0.36251241 0.04657221
## [4,] -0.072905620 -0.300944228 0.3763034 0.01617188 0.10380608 -0.26868800
## [5,] -0.064469133 -0.577204150 -0.2066357 0.30618587 -0.10829609 0.39241876
## [6,] -0.134598220 0.166741922 -0.6504258 -0.31470866 0.04006327 0.61622762
## [7,] -0.057100665 0.003082097 0.2491276 -0.13706666 0.35135111 0.20952544
## [8,] 0.272321935 0.378102038 -0.0425421 0.19229207 0.41368640 -0.15629154
## [9,] -0.418873469 -0.268267136 0.3748378 -0.56977147 0.08845407 0.48936749
## [10,] 0.360122527 -0.348470911 -0.3141064 -0.54187844 -0.03762207 0.33907019
## PC73 PC74 PC75 PC76 PC77 PC78
## [1,] -0.49482528 0.24460639 0.08431857 0.06881921 0.82267096 -0.21639410
## [2,] -0.66321935 0.09614992 0.28976729 -0.02540188 0.26502995 -0.14165379
## [3,] 0.09051718 0.32313710 0.33565447 0.19192261 -0.27682518 0.17606878
## [4,] 0.34368213 -0.06130444 -0.16510497 -0.03075230 0.01458693 -0.25085564
## [5,] -0.06352261 0.61804502 -0.12387077 -0.09976171 -0.26163696 0.21737830
## [6,] 0.30406748 -0.05945609 0.26784496 0.06530095 0.04470709 0.26341028
## [7,] -0.28152558 0.14554454 0.43478796 0.19945130 0.52916957 -0.28159779
## [8,] 0.28485036 -0.31887894 -0.44938214 0.37639983 0.11250291 -0.38435764
## [9,] -0.38905708 -0.01113561 0.06495835 -0.07100390 -0.15088105 -0.25854107
## [10,] -0.35198404 -0.21099921 0.26141763 -0.44808279 0.14852504 -0.03808206
## PC79 PC80 PC81 PC82 PC83 PC84
## [1,] 0.32835593 0.02133424 -0.23237890 -0.10045434 -0.170617940 -0.020143628
## [2,] -0.50754515 -0.39725346 -0.04796717 0.20502605 0.065324752 -0.012709484
## [3,] -0.13680143 -0.29152195 -0.50969422 0.22025426 -0.003274268 -0.112884773
## [4,] -0.02443075 0.10733128 -0.01737873 0.15995300 -0.067138140 0.118528433
## [5,] 0.34972457 0.05334557 -0.08140338 0.33058605 -0.433255592 0.077333988
## [6,] -0.26020345 0.36686340 0.05834703 -0.02281393 0.296571908 -0.391529046
## [7,] -0.03954958 0.02020130 -0.21956183 0.25090895 0.052866268 0.082894024
## [8,] 0.05263186 0.06992421 0.04743421 -0.12453713 -0.226696165 0.134512154
## [9,] -0.25432102 -0.32462103 -0.41163659 -0.47899947 0.055849931 -0.007980204
## [10,] -0.27715931 0.27021007 -0.00776845 0.31682066 -0.305325258 0.194597834
## PC85 PC86 PC87 PC88 PC89 PC90
## [1,] 0.01370139 -0.29057832 -0.38108640 -0.13754193 0.32758711 -0.20104415
## [2,] -0.01051491 0.07660813 0.04994866 -0.13582376 -0.05967964 -0.03150972
## [3,] 0.21453669 0.07073238 -0.04961740 0.16739377 -0.16180228 0.09841217
## [4,] 0.13639946 0.42434293 -0.04311300 0.31442297 -0.15148511 0.27671960
## [5,] 0.28039664 -0.01623096 -0.09114688 -0.37971828 0.03082195 -0.29085487
## [6,] -0.18836148 0.22439898 -0.14098983 -0.48856700 -0.12243095 0.31576187
## [7,] 0.13157704 -0.25786253 0.53185627 -0.02745433 -0.29475329 0.22428168
## [8,] 0.23411668 0.25239384 -0.17279028 0.09110659 -0.30900347 -0.14303433
## [9,] -0.15152947 0.25325705 0.37738043 0.22405701 -0.26149364 -0.09856849
## [10,] -0.22645739 0.13393893 0.22652832 0.53307908 -0.28089606 -0.16339559
## PC91 PC92 PC93 PC94 PC95
## [1,] -0.138695939 -0.003144301 -0.0661820837 0.151698105 -0.040362838
## [2,] -0.000557551 -0.346803578 0.0731061313 -0.188227817 0.089244989
## [3,] 0.067560608 -0.558006589 -0.0885636206 0.037228160 -0.021638755
## [4,] -0.115596016 0.006747502 -0.1079416954 0.120277824 0.275588621
## [5,] 0.059397482 -0.061871608 0.3052706155 -0.177346330 -0.043438026
## [6,] -0.156403184 0.124485341 0.0008694015 0.070669343 0.057565431
## [7,] -0.170204659 -0.078608191 0.1087636637 0.027505068 0.002995394
## [8,] -0.118711759 -0.142542485 -0.0770973826 -0.087074564 0.024195259
## [9,] 0.061849697 0.254935001 0.0761843811 0.066915843 0.271376111
## [10,] 0.278942769 0.134736056 0.0123313207 -0.003419941 0.047274770
## PC96 PC97 PC98 PC99 PC100
## [1,] 0.07245880 -0.1360880160 0.04762843 -0.078721140 0.076682386
## [2,] -0.07677867 0.2140599690 -0.04426382 -0.114856183 -0.163668029
## [3,] -0.05886410 -0.0156983562 -0.13012056 0.009571152 -0.002333773
## [4,] 0.02487558 0.0713636976 0.06135902 0.004443221 0.041203756
## [5,] -0.01551050 0.0056855850 -0.08762799 -0.095795622 0.089736759
## [6,] 0.14422434 -0.0003675789 0.14819320 -0.003460855 0.047297306
## [7,] 0.08023724 0.0301109096 0.07016886 0.004870281 0.066268303
## [8,] 0.02864671 0.0554923038 -0.05207059 -0.038420455 0.093834640
## [9,] -0.03669360 -0.0318519303 0.19664336 0.058709400 0.017709046
## [10,] 0.11302378 -0.0238171306 -0.07452152 -0.098911505 -0.162160370
## PC101 PC102 PC103 PC104 PC105
## [1,] -0.041942871 -0.05974081 0.028622042 -0.076788762 -0.004069086
## [2,] -0.003506705 -0.08386897 -0.124749585 -0.032286481 0.052564706
## [3,] -0.103361066 -0.12967680 -0.039737905 -0.036381855 0.075425763
## [4,] -0.063968569 -0.02337822 -0.024662832 -0.016356865 -0.051472530
## [5,] -0.003386760 0.03652157 -0.033827524 -0.120303342 -0.003189033
## [6,] 0.006045662 0.10012687 -0.075783382 0.010526250 0.009987957
## [7,] -0.115228728 -0.04407047 0.004048973 -0.056973993 -0.018751052
## [8,] -0.043265096 0.05668430 -0.008662054 0.009676291 -0.028029419
## [9,] -0.014188162 0.07453162 0.033611043 -0.070637033 -0.007125344
## [10,] 0.070356440 -0.04586019 0.071843447 -0.028628904 0.068661787
## PC106 PC107
## [1,] 0.0113907610 0.052041684
## [2,] -0.0008196223 -0.006220626
## [3,] 0.0382095194 -0.000406572
## [4,] 0.0351545382 -0.027490537
## [5,] 0.0603613026 0.082289250
## [6,] -0.0406492561 -0.048181873
## [7,] 0.0658791877 0.035844515
## [8,] 0.0115855813 0.055462413
## [9,] 0.0024437937 0.002318554
## [10,] 0.0083026815 -0.006460468A ver good seperation can be seen to be provided using PC1 nad PC2.
biplot(pca)
autoplot(pca,data=new_df,colour='type')
An alternative better approach to plot the results is provided by
ggbiplot. It can be seen that most of the genes are either pointed to
the right or to the left, which allows for the good separation between
the normal and HCC cases seen using the autoplot. Most of the normal
cases are mainly classified using the genes pointing to the right, while
to HCC cases are classified using the ones pointing to the left.
ggbiplot(pca, obs.scale = 2, var.scale =1 , ellipse = TRUE, circle = TRUE,groups=new_df$type) +
scale_color_discrete(name = '') +
theme(legend.direction = 'horizontal', legend.position = 'top')
The variance explained by each component is seen to decrease significantly after the first PC from 60% to 4% for PC2, then it continues to decrease at a much slower decreasing pace.
# Getting proportion of variance for a scree plot
pca.var <- pca$sdev^2
pve <- pca.var / sum(pca.var)
# Plot variance explained for each principal component
plot(pve,
xlab = "Principal Component",
ylab = "Proportion of Variance Explained",
ylim = c(0,1),
type = "b")
The cumulative proportion of variance explained by the PC components can
be also plotted.
pve## [1] 5.789657e-01 4.040908e-02 3.638356e-02 2.556411e-02 2.318503e-02
## [6] 1.967160e-02 1.720058e-02 1.544388e-02 1.207776e-02 1.182319e-02
## [11] 1.102407e-02 1.058492e-02 9.355393e-03 8.941759e-03 8.582004e-03
## [16] 7.886224e-03 7.505841e-03 7.292943e-03 6.627931e-03 6.485299e-03
## [21] 5.947498e-03 5.679626e-03 5.253164e-03 5.136734e-03 5.086393e-03
## [26] 4.601451e-03 4.580378e-03 4.416307e-03 4.095405e-03 3.912700e-03
## [31] 3.816800e-03 3.707098e-03 3.496102e-03 3.361939e-03 3.214520e-03
## [36] 3.123526e-03 2.847695e-03 2.760913e-03 2.715575e-03 2.594632e-03
## [41] 2.537984e-03 2.407908e-03 2.328776e-03 2.167264e-03 2.024559e-03
## [46] 2.001184e-03 1.968420e-03 1.842784e-03 1.819323e-03 1.674423e-03
## [51] 1.595468e-03 1.556377e-03 1.518551e-03 1.448498e-03 1.354878e-03
## [56] 1.331011e-03 1.300570e-03 1.256002e-03 1.211743e-03 1.114096e-03
## [61] 1.074739e-03 1.054544e-03 1.009164e-03 9.726548e-04 9.003628e-04
## [66] 8.767420e-04 8.448547e-04 8.030171e-04 7.654150e-04 7.465265e-04
## [71] 7.298174e-04 7.012151e-04 6.765130e-04 6.536563e-04 6.173425e-04
## [76] 6.032352e-04 5.474708e-04 5.395387e-04 5.121561e-04 4.868966e-04
## [81] 4.798703e-04 4.236585e-04 4.030733e-04 3.614664e-04 3.492909e-04
## [86] 3.454147e-04 3.360286e-04 3.001622e-04 2.907592e-04 2.642408e-04
## [91] 2.442128e-04 2.064852e-04 2.005754e-04 1.883624e-04 1.289961e-04
## [96] 9.815784e-05 7.329449e-05 6.556314e-05 6.022294e-05 5.219986e-05
## [101] 4.172105e-05 3.474847e-05 3.207074e-05 2.927123e-05 2.583833e-05
## [106] 1.733848e-05 1.197658e-05# Plot cumulative proportion of variance explained
plot(cumsum(pve), xlab = "Principal Component",
ylab = "Cumulative Proportion of Variance Explained",
ylim = c(0, 1), type = "b")
The correlations between the dimensions(pc values) and the genes, as
well as the contribution of the genes to each dimension can be examined
using get_pca_var.
get_pca_var(pca)[2]## $cor
## Dim.1 Dim.2 Dim.3 Dim.4 Dim.5
## X200606_at -0.497325656 -0.002797208 0.230555429 0.169243280 -0.037665841
## X200734_s_at -0.196085328 -0.091080338 0.091537267 -0.179758542 0.018721381
## X200882_s_at -0.827796537 0.114069597 0.074266272 -0.070694760 -0.015923607
## X200910_at -0.910703543 -0.092430440 0.082334183 -0.024033209 -0.091676109
## X200954_at -0.076490524 -0.221997346 0.427160099 -0.158437240 -0.038004606
## X201128_s_at -0.841537773 -0.178680790 0.136122348 0.053117152 -0.024053569
## X201184_s_at -0.475933343 -0.156193780 -0.286905310 0.054404792 -0.045468317
## X201293_x_at -0.858697788 -0.164421511 0.228219918 -0.099476524 -0.084064014
## X201398_s_at -0.633001488 -0.004485585 0.438773772 -0.011787517 0.036862339
## X201441_at -0.629163602 0.025169306 -0.126798218 -0.306516093 -0.248889665
## X201453_x_at -0.783374006 0.008140511 0.304834318 -0.058539518 -0.022437382
## X201516_at -0.711696708 -0.235931725 0.120991273 -0.068766427 -0.143225937
## X201527_at -0.714453255 -0.191236529 0.077774900 0.030155137 -0.090000741
## X201531_at 0.729906520 -0.189647298 0.165110535 -0.045687743 0.032819689
## X201577_at -0.850238036 -0.113608689 0.244276233 -0.037880618 -0.134026781
## X201584_s_at -0.796357701 -0.201179443 -0.052743066 0.010505985 -0.097637778
## X201656_at -0.772717600 -0.016925077 0.155489036 0.136191168 0.214012573
## X202541_at -0.558219286 -0.005545446 0.425145450 0.225547607 -0.019175212
## X202737_s_at -0.768163144 -0.174919229 0.218230044 -0.044614058 -0.194806929
## X202861_at 0.838213500 0.057081441 0.021685796 -0.088785669 -0.043681776
## X202940_at -0.002689311 -0.251390474 -0.387527089 0.093125616 -0.156751236
## X202963_at -0.791706336 -0.032391187 0.138130236 0.033800581 0.066714173
## X203316_s_at -0.865690024 -0.039080032 0.145595841 0.054195847 -0.130346677
## X203554_x_at -0.915563363 -0.113525177 -0.042708640 -0.026186507 -0.153597234
## X203755_at -0.848891584 -0.178873313 -0.106002821 0.026920829 -0.228299931
## X204018_x_at 0.671858101 -0.612544974 -0.018236500 -0.305188772 0.210506586
## X204301_at 0.707086676 0.080372576 0.009705302 0.154360124 -0.046643897
## X204428_s_at 0.924090225 0.051986919 0.046085800 -0.058435400 -0.051760625
## X204641_at -0.849259807 -0.147950660 -0.078194720 -0.005420496 -0.159049731
## X204977_at -0.695194246 -0.055076033 0.132215739 0.114748405 0.035372322
## X205019_s_at 0.937289945 -0.013769898 -0.013792813 0.119076907 -0.059449177
## X205086_s_at -0.655553165 -0.098019276 -0.107468594 -0.163911061 -0.164611960
## X205298_s_at -0.402552152 -0.016444659 0.286326597 0.174964181 0.190997850
## X205306_x_at 0.764892659 0.088445876 0.142403381 -0.272515224 -0.183171184
## X205392_s_at 0.846526543 0.018614072 0.117950531 -0.038111896 -0.015929941
## X205440_s_at 0.740164534 -0.188182287 0.171633703 0.310988791 -0.096045080
## X205531_s_at 0.834390234 0.082278431 -0.030603886 -0.218291330 -0.229401227
## X205554_s_at 0.899061510 -0.015873375 0.188513210 0.058094686 -0.071193678
## X205740_s_at -0.709323179 -0.147679783 0.060788716 -0.071211945 -0.213753328
## X205819_at 0.785058724 -0.268920571 0.185590608 0.136604320 -0.127778941
## X205858_at 0.761166995 -0.176161305 0.144979225 0.182781738 -0.081678999
## X205866_at 0.917144511 -0.129662309 0.096616739 0.142243885 -0.124932381
## X205890_s_at -0.678061362 -0.091294985 0.138663039 0.036742458 -0.002485794
## X205911_at 0.870878613 -0.058957324 0.035475551 0.140656015 -0.091098761
## X206380_s_at 0.837448581 -0.193728200 0.099066863 0.150438054 -0.156155062
## X206453_s_at 0.877950487 0.101476254 0.071705099 -0.109777059 -0.049953404
## X206643_at 0.436146892 0.001554682 -0.174087339 -0.346192602 -0.578605210
## X206680_at 0.859761420 -0.143342593 0.128816125 0.073600709 -0.034520227
## X207076_s_at 0.822503031 0.062541849 0.061405064 -0.216198433 -0.243565593
## X207218_at 0.725370110 0.251717557 0.279055119 -0.334340901 0.013364765
## X207262_at 0.882889449 0.051198798 0.181171856 -0.107466330 -0.107604065
## X207330_at 0.571636154 -0.174361221 0.069273064 0.066065776 -0.044733977
## X207609_s_at 0.912484949 0.058588010 0.025170961 0.090880882 0.004785938
## X207804_s_at 0.865431840 -0.188436702 0.082234156 0.166090683 -0.161377943
## X207828_s_at -0.891995285 -0.100570012 -0.144824942 -0.027666540 -0.180841843
## X207995_s_at 0.814215757 -0.145520200 0.077607973 0.161620626 -0.256428417
## X208079_s_at -0.859920243 -0.045887187 -0.064794122 -0.106830908 -0.182813495
## X208147_s_at 0.781301480 0.278464647 0.222142502 -0.124812695 0.108074601
## X208816_x_at -0.749187055 -0.229365358 0.126612365 0.115909423 0.137808334
## X209189_at 0.841632259 -0.189239018 0.097996480 0.074646103 -0.006016838
## X209219_at -0.837978397 -0.049651641 0.104586168 -0.042707771 -0.086186885
## X209335_at 0.809479157 -0.140203751 0.110771636 0.257139626 0.071612116
## X209365_s_at 0.928849782 -0.121710568 0.083974547 0.150886401 -0.074697950
## X209447_at 0.844543373 0.055475767 -0.002418482 0.049497624 -0.030411917
## X209458_x_at 0.672478278 -0.610899081 -0.016734897 -0.307498933 0.210359090
## X209821_at 0.488412080 -0.197220105 0.373664087 0.338267877 -0.161836681
## X209825_s_at -0.859322916 -0.135865906 0.007336037 -0.046362683 -0.177519080
## X210095_s_at 0.693662699 -0.214355544 -0.109785523 0.285082481 -0.123670407
## X210481_s_at 0.863044828 -0.112792450 0.010715296 0.100185884 -0.156515940
## X210909_x_at 0.773181678 0.064457852 0.148843316 -0.033942891 -0.227950711
## X211023_at -0.243682572 -0.021453245 0.331482545 0.011838024 -0.277709410
## X211378_x_at -0.868067469 -0.157431262 0.204500322 -0.096045709 -0.067104530
## X211628_x_at -0.663495554 -0.095285261 0.115329013 -0.143398880 0.026381834
## X211699_x_at 0.669340425 -0.620036009 -0.020255088 -0.280617791 0.218976964
## X211745_x_at 0.667326743 -0.619895851 -0.020126352 -0.299895083 0.213034866
## X211765_x_at -0.861371424 -0.158869745 0.228046177 -0.106686407 -0.081016032
## X211978_x_at -0.878512520 -0.155643461 0.202294736 -0.088617381 -0.078911215
## X212149_at -0.377913736 0.161516715 0.550626026 0.002186708 0.166124591
## X212551_at -0.787618004 0.108438416 0.210169647 -0.115718319 0.116248842
## X212554_at -0.827406595 0.106582096 0.251531607 -0.053374908 0.109117124
## X212661_x_at -0.857341183 -0.168246012 0.224463690 -0.110897971 -0.092960529
## X213068_at 0.603128090 -0.253588928 0.291059479 0.244606135 0.053903445
## X213629_x_at 0.852297120 -0.056289622 0.008572562 0.015685746 -0.030004898
## X214414_x_at 0.676280093 -0.588546488 -0.073802158 -0.273321699 0.241787795
## X214421_x_at 0.777113310 0.254780850 0.340442888 -0.231585478 0.097284031
## X214710_s_at -0.895054194 -0.137058547 -0.027131507 -0.012673466 -0.188096917
## X215138_s_at 0.419711050 0.119854495 -0.404285470 0.030308057 0.116801862
## X215330_at 0.623400919 -0.163207944 0.107512442 0.096391332 -0.077577641
## X215768_at 0.576437984 0.093927806 0.021614010 -0.056287259 -0.103640673
## X216025_x_at 0.777946851 0.261405681 0.335148878 -0.225504198 0.103460070
## X216661_x_at 0.788927948 0.249401520 0.341889017 -0.233727956 0.080982919
## X216782_at 0.496223126 -0.011494133 -0.229793702 0.038248352 0.225478532
## X217165_x_at 0.847790966 -0.019733882 0.073862401 -0.004730694 0.015987558
## X217319_x_at 0.851332691 0.216611817 0.207179148 -0.210473448 -0.026785823
## X217414_x_at 0.675481666 -0.608333795 -0.034547334 -0.299505201 0.218158222
## X217521_at 0.564675122 0.037027202 -0.192846487 -0.356869483 -0.526389698
## X218002_s_at 0.918063583 -0.105948107 0.037141047 0.162117175 -0.082476717
## X218061_at -0.758782805 0.062466113 -0.036067502 -0.158048396 -0.104423609
## X219485_s_at -0.766481543 -0.100706642 0.402392888 0.032771549 -0.035756349
## X219787_s_at -0.859023693 -0.178638869 -0.024187958 0.075790710 -0.094946964
## X220017_x_at 0.768193446 0.274417603 0.332438071 -0.227571663 0.117251621
## X220114_s_at 0.894296985 -0.164751208 0.102798889 0.132566694 -0.169627930
## X220116_at 0.763364017 0.105001612 -0.009434492 0.080829297 -0.212828513
## X220148_at 0.763762497 0.198484191 0.156115620 -0.267594639 -0.140336000
## X220491_at 0.843671019 -0.092470506 0.012808923 0.083050379 -0.079737849
## X220496_at 0.884822569 -0.121065869 0.122050337 0.151582071 -0.183137230
## X36829_at 0.829843410 0.099735316 -0.102329146 -0.092764738 0.012958497
## Dim.6 Dim.7 Dim.8 Dim.9
## X200606_at 0.370690497 -0.106792867 0.0320798236 -3.747773e-01
## X200734_s_at -0.502452935 0.102685943 0.3883843754 3.457353e-01
## X200882_s_at 0.082686531 -0.021522100 -0.1503106045 -2.088938e-02
## X200910_at 0.062846580 -0.018586584 -0.1116399677 -8.815578e-02
## X200954_at -0.334826611 0.412059224 0.1054651476 -2.460355e-01
## X201128_s_at 0.037955473 -0.120360991 0.1228228074 -8.613885e-02
## X201184_s_at -0.366911630 -0.077949316 0.3057021377 -1.657344e-01
## X201293_x_at -0.188217897 0.112189473 -0.1404905610 -3.948355e-02
## X201398_s_at 0.050387620 -0.160909323 0.1163946907 3.250492e-02
## X201441_at -0.334672712 0.069677119 -0.0690422455 -4.624619e-02
## X201453_x_at 0.101376484 0.154341407 -0.0670472209 4.949002e-02
## X201516_at -0.095898066 0.101081052 0.0973008488 4.504650e-02
## X201527_at -0.294401017 0.111117319 0.0479230107 -1.346141e-01
## X201531_at -0.103020266 -0.019350945 -0.0173108377 -2.487606e-01
## X201577_at -0.004543311 0.106084230 0.0126683920 3.916243e-03
## X201584_s_at -0.082784578 -0.105526314 -0.0903931087 -1.528322e-01
## X201656_at 0.129842462 -0.099023805 0.0284146032 -4.414474e-02
## X202541_at 0.243449071 0.105155348 0.1979788626 1.024650e-02
## X202737_s_at 0.023045978 0.116905123 0.1847301473 3.596924e-02
## X202861_at -0.083397222 0.064790108 0.1616978716 -2.353302e-01
## X202940_at 0.102024546 -0.250366368 0.4095550184 -1.631502e-01
## X202963_at -0.127298629 -0.215400507 -0.0298084432 1.149982e-01
## X203316_s_at 0.177979006 -0.087412318 -0.1296983015 -9.428920e-03
## X203554_x_at -0.015148445 -0.058970065 -0.0555840383 1.121857e-01
## X203755_at 0.051457340 -0.029836425 0.0079619133 1.585494e-01
## X204018_x_at 0.135274806 0.012713635 -0.0184303906 2.876722e-02
## X204301_at 0.156249528 0.262644758 -0.0733946901 -3.762218e-02
## X204428_s_at 0.020738241 0.063777016 0.0440682819 1.387072e-02
## X204641_at 0.128206440 -0.016198013 -0.1068162229 1.286258e-01
## X204977_at 0.143714861 0.039519947 0.1537396392 -6.595958e-02
## X205019_s_at -0.029832628 0.083446521 -0.0236225947 -5.017568e-02
## X205086_s_at 0.107809208 0.034021250 -0.1007777870 1.320909e-03
## X205298_s_at -0.140638651 -0.164633044 0.1543879909 2.933229e-01
## X205306_x_at -0.048264421 -0.087262561 0.0467916365 6.662513e-02
## X205392_s_at -0.071219049 0.022303073 -0.1224462597 1.440622e-02
## X205440_s_at -0.042842431 -0.048757433 -0.0411282243 3.909074e-02
## X205531_s_at -0.068981536 -0.021313699 0.0660751043 2.325596e-02
## X205554_s_at -0.038888570 0.019609790 -0.0810510925 1.958418e-02
## X205740_s_at -0.025714368 0.012254449 0.1389785774 -1.477127e-01
## X205819_at -0.083431746 -0.014249421 -0.1178174259 1.634365e-01
## X205858_at -0.091851118 -0.103668991 -0.1310528853 -8.154498e-02
## X205866_at -0.081826874 0.038445840 -0.0898024574 3.373373e-02
## X205890_s_at -0.217162351 -0.391811795 0.0645736347 -3.491222e-02
## X205911_at 0.059629533 0.028177558 -0.0027613375 -2.564896e-02
## X206380_s_at -0.049891899 0.045535540 -0.1130528007 6.762482e-02
## X206453_s_at 0.032304053 0.040939992 0.0006955403 -5.975931e-02
## X206643_at 0.057352952 -0.400925488 -0.0023610398 -3.837835e-02
## X206680_at -0.007269860 -0.049240137 -0.0593964439 8.749493e-02
## X207076_s_at -0.083417370 0.065248323 0.0082452308 -8.129633e-02
## X207218_at -0.086218524 -0.065752450 0.0586599281 1.035786e-01
## X207262_at 0.057436673 -0.026307704 0.0573145293 8.610901e-02
## X207330_at -0.021522528 -0.132624217 0.0851104449 7.581869e-02
## X207609_s_at 0.077982794 0.145313018 0.0141886708 -1.911093e-02
## X207804_s_at -0.007405221 0.025369506 -0.1090954937 7.642397e-02
## X207828_s_at 0.043829032 -0.027609960 -0.1550773031 2.629586e-02
## X207995_s_at 0.044899533 0.077275767 -0.0697421636 4.799479e-02
## X208079_s_at -0.023610356 -0.003825782 -0.0152716312 3.655124e-02
## X208147_s_at -0.133521311 -0.074389318 0.0467845575 4.712236e-02
## X208816_x_at -0.221128811 -0.171642616 -0.0568493305 4.675184e-02
## X209189_at -0.035897183 0.068804208 0.0317796608 -1.207444e-01
## X209219_at 0.094547681 0.123558419 -0.1213068686 -1.322951e-01
## X209335_at -0.219730501 -0.191677222 -0.0421481943 -5.600089e-02
## X209365_s_at -0.080674019 0.009455138 -0.0567217232 -1.570937e-02
## X209447_at 0.050299713 -0.055542900 0.1327461090 9.744406e-03
## X209458_x_at 0.148413492 0.004608560 -0.0190809922 1.359084e-02
## X209821_at 0.042681271 -0.271062332 -0.0448630021 9.367447e-02
## X209825_s_at 0.086765086 0.014951209 -0.1010846564 -2.380747e-02
## X210095_s_at -0.083679365 -0.136067539 0.0055943696 -4.322295e-02
## X210481_s_at 0.022535123 0.077887656 -0.1159860774 6.432798e-02
## X210909_x_at 0.154321813 0.219447347 -0.0615193302 6.021947e-02
## X211023_at 0.405771144 -0.094805299 0.2294492062 -5.700194e-03
## X211378_x_at -0.186011790 0.112792773 -0.1333182658 -2.669404e-02
## X211628_x_at 0.060999770 -0.088825340 0.0799579029 1.054120e-01
## X211699_x_at 0.146614559 -0.004549146 -0.0141332942 1.149377e-02
## X211745_x_at 0.152730762 0.005376712 -0.0020180611 1.285357e-02
## X211765_x_at -0.182743752 0.114946461 -0.1390620129 -4.144954e-02
## X211978_x_at -0.180367099 0.075712740 -0.1152512914 -3.608823e-02
## X212149_at 0.026239171 -0.003844242 0.2976040223 8.549721e-03
## X212551_at 0.116345908 -0.095530595 -0.1268874058 -1.400866e-01
## X212554_at 0.098280401 -0.142612905 -0.1076631220 -7.460124e-02
## X212661_x_at -0.197099014 0.110730163 -0.1377961738 -4.671537e-02
## X213068_at -0.241687931 -0.304549545 -0.0995850099 -1.190751e-01
## X213629_x_at -0.018038109 0.074456418 0.1506811790 8.570216e-02
## X214414_x_at 0.166655828 -0.022917334 0.0357779048 4.095295e-02
## X214421_x_at 0.009337595 -0.117487748 -0.1453902457 -4.595059e-02
## X214710_s_at 0.046199428 -0.053453889 -0.0311075587 1.198789e-01
## X215138_s_at -0.130661009 0.024958935 -0.2927584503 1.176693e-01
## X215330_at 0.008951298 0.061932412 0.1722352502 -3.198087e-01
## X215768_at 0.087949632 0.043050547 0.3531099967 1.306282e-01
## X216025_x_at 0.009484506 -0.119388697 -0.1435152183 -3.284965e-02
## X216661_x_at 0.009362822 -0.093174703 -0.1547823187 -5.408565e-02
## X216782_at -0.186457178 -0.291666118 -0.0604192927 -1.423547e-01
## X217165_x_at -0.008949942 0.096539922 0.1551836507 7.649638e-02
## X217319_x_at -0.004460044 -0.053542670 0.0572332027 -2.821804e-02
## X217414_x_at 0.146637660 -0.000132338 -0.0062074731 3.354708e-02
## X217521_at 0.051533131 -0.329312604 0.0048583152 -6.941452e-02
## X218002_s_at -0.044207157 -0.003118210 -0.0321137940 -3.049818e-02
## X218061_at -0.049751685 0.044936091 -0.0474086737 -2.808833e-02
## X219485_s_at 0.100108534 -0.037057741 0.0227498189 9.576239e-02
## X219787_s_at 0.083448765 -0.016825549 -0.0298584140 1.901944e-01
## X220017_x_at 0.013265487 -0.131676501 -0.1487680288 -2.887399e-02
## X220114_s_at -0.025846896 0.024810748 -0.0772889659 -9.868093e-05
## X220116_at 0.136419346 0.300348033 0.0655956198 4.627407e-02
## X220148_at -0.011860371 -0.176206361 0.0607749220 1.206919e-01
## X220491_at -0.078154818 -0.039516455 -0.0270157677 -1.016904e-02
## X220496_at 0.020809874 0.096830338 -0.0967878217 1.009514e-01
## X36829_at -0.081727697 0.091197876 0.1082152918 -2.405037e-01
## Dim.10 Dim.11 Dim.12 Dim.13
## X200606_at 0.0762825374 -0.030517482 0.0204445463 -0.083817676
## X200734_s_at 0.1009054299 0.217117830 0.0539113149 0.139697205
## X200882_s_at 0.0918960272 0.102705255 -0.0083857308 -0.028473217
## X200910_at 0.0604068017 0.023505115 -0.0040512339 -0.028738724
## X200954_at 0.2843815831 -0.024517258 -0.1378628718 -0.143679111
## X201128_s_at 0.0572013192 0.046395700 0.0149932457 0.119140980
## X201184_s_at 0.2368705451 -0.008403916 0.1820563253 0.095824482
## X201293_x_at -0.1634051287 -0.111355000 0.0528836887 0.018410445
## X201398_s_at -0.0155615918 0.117411728 -0.0537749350 -0.121026747
## X201441_at 0.1082528362 0.008114726 -0.0833459660 0.263870653
## X201453_x_at -0.0212562271 0.067966986 0.0226264659 0.116871239
## X201516_at -0.1183750455 -0.070617788 0.0049202521 -0.059850315
## X201527_at 0.1932759356 -0.074311181 0.0626387998 -0.079378817
## X201531_at -0.3351732693 0.131678118 -0.0750337632 -0.102594647
## X201577_at 0.0161757244 -0.075471915 0.0185678815 0.018911380
## X201584_s_at 0.0815970699 0.086556445 0.1718512357 -0.025238829
## X201656_at 0.0001713774 -0.102788004 0.0546666833 0.014853850
## X202541_at 0.1320846330 -0.003045228 0.1006469766 0.100872963
## X202737_s_at -0.0387996598 0.018989774 0.0337000712 0.058171937
## X202861_at -0.0928118277 0.089688907 0.1140590672 -0.054690626
## X202940_at 0.2288515237 -0.092459537 0.1276532296 -0.127930836
## X202963_at -0.1172436337 0.085981403 -0.0748689470 0.080358740
## X203316_s_at 0.1058774015 0.035881234 -0.0593795334 0.118799803
## X203554_x_at 0.0073569706 0.057404336 0.1451355524 0.037208855
## X203755_at -0.1104777609 0.019463192 0.1887050988 -0.043597820
## X204018_x_at 0.0458025536 -0.009367205 -0.0010230916 0.028604021
## X204301_at 0.0797755665 0.082112761 0.0216583740 0.153235744
## X204428_s_at 0.0491226043 -0.107039954 0.1052591945 -0.028166611
## X204641_at -0.0307842672 0.077339740 0.2206622262 0.006142859
## X204977_at -0.1323391405 0.001164916 -0.0594507083 0.073391812
## X205019_s_at -0.0041851975 0.056199094 0.0445036988 0.032337102
## X205086_s_at 0.0888730364 0.106552534 0.0398743572 -0.154301165
## X205298_s_at 0.0986206745 -0.132411136 0.0383199375 -0.423753211
## X205306_x_at 0.0035705280 -0.032768048 -0.0912952428 0.042236614
## X205392_s_at 0.1420014378 0.059785856 -0.2184882671 0.063435773
## X205440_s_at -0.0308895080 -0.010030701 -0.0227537926 0.280531831
## X205531_s_at 0.0700448031 -0.052375741 -0.0680134054 0.004072521
## X205554_s_at 0.0810245045 -0.037691617 -0.1321742859 0.061737749
## X205740_s_at 0.2390128380 0.074645836 0.0500293386 -0.037861549
## X205819_at 0.0609470902 -0.030702671 -0.0397154430 -0.147565263
## X205858_at 0.1098982046 0.115410802 -0.0237473532 -0.049336663
## X205866_at -0.0047684294 -0.015452460 0.0196552269 -0.008532145
## X205890_s_at 0.0661939154 -0.094899849 0.0399814424 -0.118938207
## X205911_at 0.0712307521 0.136016569 0.0546085260 -0.019271514
## X206380_s_at 0.0109926829 0.078795417 -0.0069246544 -0.086409374
## X206453_s_at -0.0074177752 -0.121198923 0.0141620202 0.041084718
## X206643_at -0.1095685691 0.049045765 -0.1873930134 -0.070690847
## X206680_at 0.0605824582 -0.016984918 -0.0227427552 -0.101343936
## X207076_s_at 0.0148821863 -0.183548455 -0.0318488975 -0.055945377
## X207218_at 0.0283101427 -0.087132462 -0.0466787399 0.037675910
## X207262_at -0.0254146547 0.040033247 0.0168326665 -0.068270254
## X207330_at 0.1059358871 0.216774325 0.1492517324 0.081792108
## X207609_s_at -0.0377007568 0.012241663 0.1384108742 -0.028750233
## X207804_s_at 0.0461481650 0.097265858 -0.0084418587 -0.062347219
## X207828_s_at 0.0009692578 0.042578394 0.1782163803 0.053509483
## X207995_s_at 0.0014147329 0.065006607 -0.0330132235 -0.129874565
## X208079_s_at 0.0368641184 0.130105538 0.1272776436 0.048883571
## X208147_s_at -0.0484359782 0.144988719 0.0650066646 0.096511545
## X208816_x_at -0.1116412708 0.034919362 -0.1219377970 -0.080684489
## X209189_at -0.2426805777 0.012410665 0.0317907859 0.023219336
## X209219_at 0.0647727629 0.148946341 -0.0138611931 0.077510135
## X209335_at -0.1058523758 -0.040650565 -0.0183858251 0.106099880
## X209365_s_at -0.0465770852 0.008127984 0.0330389435 -0.003383364
## X209447_at 0.0036349755 -0.062221372 -0.0027170846 0.092238346
## X209458_x_at 0.0415276924 -0.007398836 -0.0031817029 0.024846131
## X209821_at 0.2021424135 0.045170470 -0.1386622863 0.161987412
## X209825_s_at -0.0878170907 -0.013220445 0.0810898552 -0.100817028
## X210095_s_at -0.1686516200 0.053197287 0.1907902734 0.056463139
## X210481_s_at 0.0339879110 0.107955572 -0.0127761980 -0.132257511
## X210909_x_at 0.0740231055 -0.058116968 -0.0578641410 -0.023114522
## X211023_at -0.0170264141 -0.346875394 0.0722957180 0.123045185
## X211378_x_at -0.1699075824 -0.102475645 0.0438236282 0.027205420
## X211628_x_at -0.1709114261 0.253941221 -0.2016745157 -0.086161310
## X211699_x_at 0.0439010678 0.007086401 -0.0001366962 0.025564863
## X211745_x_at 0.0380612720 0.010723408 0.0022281671 0.034194978
## X211765_x_at -0.1607810096 -0.111062604 0.0451492404 0.012963424
## X211978_x_at -0.1504241523 -0.109956181 0.0484433557 0.007095467
## X212149_at -0.0600666013 0.293692840 -0.0414536510 -0.147993778
## X212551_at 0.0066044829 0.175366465 -0.1112074269 -0.020189766
## X212554_at 0.0361141898 0.200645858 -0.1039050479 0.018194822
## X212661_x_at -0.1508923264 -0.105642755 0.0515535662 0.016647334
## X213068_at 0.0392035360 -0.091844236 -0.0292209784 0.198765323
## X213629_x_at -0.1501669559 -0.052490996 0.0853507472 -0.098642233
## X214414_x_at 0.0315597530 0.016818208 0.0163786548 0.061948361
## X214421_x_at 0.0636730552 0.002975170 0.2833043004 -0.017934627
## X214710_s_at -0.0581611765 0.007370713 0.1670902564 -0.029718502
## X215138_s_at 0.2029442806 0.199703006 0.1386400618 -0.107008898
## X215330_at -0.1825258025 0.222705599 0.0543704067 -0.075230143
## X215768_at -0.1908995707 0.203569488 0.0511363064 0.157405145
## X216025_x_at 0.0474163475 0.009844747 0.2818823175 -0.008343256
## X216661_x_at 0.0402706757 -0.007599655 0.2561906964 -0.027636436
## X216782_at -0.1031246823 0.054890183 0.0402689140 0.144984982
## X217165_x_at -0.1468584626 -0.050531961 0.0530511045 -0.097320414
## X217319_x_at 0.0479167873 -0.002081897 0.0422291751 -0.003023196
## X217414_x_at 0.0326435084 -0.006241068 -0.0008861310 0.024215026
## X217521_at -0.0807321590 0.064436627 -0.1531269122 -0.072389704
## X218002_s_at -0.0289247674 -0.004699495 0.0707558262 0.009541413
## X218061_at 0.1126279807 0.236216895 0.0086023154 0.019795570
## X219485_s_at 0.0928510288 0.022856332 -0.0214839043 0.090055539
## X219787_s_at -0.1598193211 0.085146590 0.1983387929 0.024909995
## X220017_x_at 0.0500598786 0.020477715 0.2865097450 -0.002309435
## X220114_s_at 0.0526361708 0.082121634 0.0272455183 -0.060187752
## X220116_at 0.0041472852 0.115548075 0.0151332935 0.110684438
## X220148_at 0.0245133015 -0.110212042 0.0438099165 0.108533678
## X220491_at -0.0783452024 -0.086713816 0.0720317058 -0.040531405
## X220496_at 0.0349446267 0.040763627 -0.0023949112 -0.030598078
## X36829_at -0.0961116677 0.174641879 0.0969894414 0.008398470
## Dim.14 Dim.15 Dim.16 Dim.17
## X200606_at 0.2166170360 0.0862707049 -0.1184145906 0.1661212030
## X200734_s_at 0.2907407612 0.0744379882 -0.1191583509 0.1416396620
## X200882_s_at 0.0519809073 0.0717258007 0.0274025072 -0.0810204986
## X200910_at 0.0022923971 -0.0472199365 0.0433862104 -0.0389982237
## X200954_at -0.0480608098 -0.2351933333 -0.0263012672 0.0395854770
## X201128_s_at 0.0350248269 -0.0287863864 0.0118211231 -0.0501561752
## X201184_s_at -0.0042953152 0.1867522783 0.1248966823 -0.1005340453
## X201293_x_at -0.0817284055 -0.0248504695 0.0964481211 0.0782725871
## X201398_s_at -0.1667111641 -0.2689873735 -0.0268087714 -0.0385833608
## X201441_at 0.0421175780 0.0116749182 0.0531490707 -0.0069431256
## X201453_x_at -0.0261978876 0.1153611502 0.0588511138 -0.0100460238
## X201516_at 0.1588025339 0.0149830416 -0.0731620064 -0.2029173928
## X201527_at -0.0089720987 0.0786126130 -0.1604843018 -0.0639186706
## X201531_at 0.0314634184 0.0460700419 0.0135040170 -0.1771971148
## X201577_at 0.0798998883 -0.1022238938 0.0897784900 -0.0123266434
## X201584_s_at -0.0569614841 -0.0626183956 0.1019435579 -0.1099899327
## X201656_at -0.0112897143 0.0606580207 0.1038321299 0.1495432118
## X202541_at -0.0343962686 -0.0786812397 -0.1317321248 0.0521447505
## X202737_s_at -0.0014046968 -0.0879893991 -0.0505045088 -0.0519834425
## X202861_at 0.0412280052 0.0517739585 -0.0839094749 0.0352779524
## X202940_at -0.0936039897 -0.0066222057 0.3842235609 0.0565050376
## X202963_at -0.0203415218 0.1261999980 0.1082948766 0.1479926235
## X203316_s_at 0.0525336747 0.0238662739 -0.0066228895 -0.0307755761
## X203554_x_at 0.0419283397 0.0416828237 0.0211571481 0.0234857739
## X203755_at 0.0634151043 0.0107519702 -0.0388595119 0.0608067611
## X204018_x_at -0.0209515046 0.0158663151 -0.0116842298 0.0298842693
## X204301_at 0.0055984696 -0.0652759344 -0.0071960482 0.0572147887
## X204428_s_at 0.0324602142 0.0227433101 0.0025287965 0.0072054451
## X204641_at -0.0010466262 -0.0161481605 -0.0356333279 0.0256447093
## X204977_at 0.1271299734 0.1027384546 0.2370676334 -0.0308073240
## X205019_s_at 0.0408250568 -0.0718256439 0.0174865146 0.0843527364
## X205086_s_at -0.1741623355 0.0188923530 -0.0431903151 0.1553373554
## X205298_s_at -0.1722872010 0.1988606803 -0.1927905208 0.1848094285
## X205306_x_at 0.1351153437 -0.0491517155 0.0659392767 0.0433399517
## X205392_s_at 0.0844381647 0.0973280512 0.1793299263 -0.0277748082
## X205440_s_at -0.1271704849 0.0381093442 0.0045642232 -0.0547633391
## X205531_s_at 0.0105084643 0.0290399515 -0.1295105007 0.0650621063
## X205554_s_at 0.0273403184 0.1071328075 0.1089240533 -0.0215900743
## X205740_s_at -0.1354081094 0.0550437464 -0.0408080235 0.0262601863
## X205819_at 0.0264403704 0.0863825134 0.0912717080 -0.0111791408
## X205858_at 0.0311328443 -0.0732283814 0.0690003057 0.1324154255
## X205866_at 0.0392417343 0.0462148777 0.0251411293 0.0273756284
## X205890_s_at 0.1795617462 0.0891064393 0.0588440730 -0.0494156635
## X205911_at 0.0267432092 -0.1123150289 0.0197239457 0.1126354770
## X206380_s_at 0.0569664319 0.0708228006 0.1436208042 -0.0087187542
## X206453_s_at -0.0173430253 0.1216602008 0.0243231709 -0.0155827171
## X206643_at -0.0643552309 -0.0592300522 -0.1070290326 0.0275155926
## X206680_at 0.1014648865 -0.0007355566 0.1151003982 0.0050753423
## X207076_s_at -0.0140850632 -0.0660842066 -0.0477177349 -0.0222822171
## X207218_at -0.0775508346 0.0016994345 0.1256173976 0.0391012074
## X207262_at 0.0099641957 0.0009012391 -0.0496788314 0.0037935669
## X207330_at -0.0745553783 -0.2634417817 -0.0896894271 -0.3813917751
## X207609_s_at 0.0229291353 -0.0104538072 0.0135873496 0.0264868452
## X207804_s_at 0.0217559972 0.0693287735 0.0949826475 0.0270566344
## X207828_s_at -0.0324622383 0.0549630309 0.0112020050 -0.0140242419
## X207995_s_at -0.0625410065 0.1451560417 0.0527438803 -0.0167543927
## X208079_s_at 0.0882921109 0.0258717958 0.0069922289 0.0218135445
## X208147_s_at -0.0782293693 0.0589192748 -0.0213053750 -0.0207208118
## X208816_x_at 0.1041402359 -0.0787587273 -0.0172960760 0.0007584533
## X209189_at 0.0054348307 0.0629413083 -0.0844673172 -0.0743233489
## X209219_at 0.0803570075 0.1353121190 -0.1021071785 0.1042688332
## X209335_at 0.0178572449 -0.0144540294 -0.0470653414 -0.0394371059
## X209365_s_at 0.0603007088 -0.0055192269 -0.0288685803 0.0001800421
## X209447_at -0.0744333036 0.0241105038 0.0001860408 0.0441830322
## X209458_x_at -0.0081942306 0.0143252248 -0.0035804518 0.0230634133
## X209821_at -0.1229425485 0.0525214793 -0.0592747982 -0.0640584966
## X209825_s_at 0.0272132556 -0.0540256309 0.0082475778 -0.0277929313
## X210095_s_at -0.0953984474 -0.0960574489 -0.1184381013 0.0325058114
## X210481_s_at 0.0206102215 0.0572680537 0.0850871793 -0.0184924235
## X210909_x_at 0.0280927459 -0.0591954290 -0.0404903042 0.0768785476
## X211023_at 0.3451967752 -0.1337217774 0.0735477928 0.0093048548
## X211378_x_at -0.0877858957 -0.0198421829 0.1048982951 0.0794932195
## X211628_x_at 0.1886108842 -0.0977850404 0.0712127528 -0.0772846008
## X211699_x_at -0.0074056332 0.0144313326 -0.0233507043 0.0292960847
## X211745_x_at -0.0124835740 0.0022921254 -0.0020411480 0.0215112850
## X211765_x_at -0.0819785852 -0.0240716624 0.0945574281 0.0764642526
## X211978_x_at -0.0909572774 -0.0382683619 0.0738895524 0.0744333761
## X212149_at -0.0161079971 -0.2556827450 0.1565708489 0.0809269903
## X212551_at 0.0304244971 0.1488129569 0.0286095331 -0.0208368351
## X212554_at 0.0596741151 0.1289683453 0.0298620468 0.0118323686
## X212661_x_at -0.0892623412 -0.0220503478 0.0865001603 0.0865759321
## X213068_at 0.0105349817 -0.0843612125 -0.1245390592 0.0495206186
## X213629_x_at 0.1641869735 0.0652469916 -0.0252786523 -0.0522357075
## X214414_x_at -0.0008676642 0.0090222818 -0.0143625568 0.0096616048
## X214421_x_at 0.0023284035 0.0224285432 0.0027900683 -0.0513711563
## X214710_s_at 0.0436043798 -0.0398239455 0.0117353220 0.0180467825
## X215138_s_at 0.1696545706 -0.2691003727 0.1691824014 0.0409607009
## X215330_at -0.0397825307 0.1649949086 0.0095014681 0.0409335907
## X215768_at -0.3365025802 0.1007422880 0.1881810772 0.0471568115
## X216025_x_at 0.0055759392 0.0340874973 0.0104500496 -0.0456282709
## X216661_x_at -0.0121504729 0.0132948676 0.0003375917 -0.0505343126
## X216782_at 0.1341026746 -0.1655625295 -0.0430877648 0.4052301801
## X217165_x_at 0.1809835845 0.0956822661 -0.0012900752 -0.0741826562
## X217319_x_at 0.0316832280 0.0232082988 0.0293258691 0.0353128433
## X217414_x_at -0.0154400642 0.0142197603 -0.0235609754 0.0121502198
## X217521_at -0.0541176681 -0.0410432768 -0.1033110823 0.0545058673
## X218002_s_at 0.0346804322 -0.0541069723 -0.0128429108 0.0537728227
## X218061_at 0.1157608994 0.1939502511 -0.1224237123 -0.0030006356
## X219485_s_at -0.0604805867 0.0801238718 -0.1237176665 0.0435827849
## X219787_s_at 0.0294013608 0.0028878940 -0.0403823713 0.0533257234
## X220017_x_at 0.0021380347 0.0353087989 0.0201907782 -0.0450974297
## X220114_s_at 0.0348668300 0.0437405005 0.0251959649 0.0307134537
## X220116_at -0.0133396077 -0.0417560467 -0.0393555098 0.1619550872
## X220148_at -0.0229520788 -0.0014830014 0.1018524430 0.0503937633
## X220491_at 0.0411415597 0.0152745422 -0.0479899160 -0.0303296601
## X220496_at 0.0231127631 0.0281537365 0.0574227138 0.0193133428
## X36829_at 0.0713561496 0.0324006477 -0.0005583037 0.0666390555
## Dim.18 Dim.19 Dim.20 Dim.21
## X200606_at -7.013366e-02 0.249532987 -0.032311887 1.706039e-01
## X200734_s_at -1.229588e-01 0.170009562 -0.080265864 -1.266571e-01
## X200882_s_at -6.097662e-02 -0.154185155 0.092167754 -2.678896e-02
## X200910_at -7.833971e-02 -0.075012379 0.044553227 -4.246347e-02
## X200954_at 4.085418e-02 0.028738871 0.098102835 -8.628096e-02
## X201128_s_at -1.932832e-01 -0.025473634 -0.078006651 -7.673772e-02
## X201184_s_at -1.323571e-01 0.019193164 -0.164203661 1.692236e-01
## X201293_x_at 1.122943e-02 0.068354192 -0.058829258 3.088128e-02
## X201398_s_at -1.567893e-01 -0.018697279 -0.077399013 5.662248e-02
## X201441_at 6.546241e-02 -0.022265482 0.012906278 -3.905815e-02
## X201453_x_at 2.820668e-02 -0.058804653 0.039963787 7.413945e-02
## X201516_at 1.346894e-02 -0.239071438 -0.102792184 -8.067924e-02
## X201527_at -3.230769e-02 0.064251767 -0.057417852 1.005626e-01
## X201531_at -5.941449e-03 0.030745658 0.071234599 -6.649377e-02
## X201577_at -5.352057e-02 -0.076519054 0.012555537 -3.941031e-02
## X201584_s_at -6.270937e-02 -0.081283779 0.183032184 8.662543e-02
## X201656_at 8.130669e-02 0.147104587 -0.032129849 -7.181431e-02
## X202541_at 3.339041e-02 0.087037012 0.145930452 1.759380e-01
## X202737_s_at 7.158510e-02 -0.057230211 -0.012082897 -2.360602e-02
## X202861_at -6.033612e-02 0.011617528 0.095815032 -1.940769e-02
## X202940_at 2.173326e-01 0.028912146 -0.027811524 -1.894725e-01
## X202963_at -1.240424e-01 -0.002552402 0.116556956 9.904255e-02
## X203316_s_at -7.025817e-02 -0.023084066 0.094176621 -3.815393e-02
## X203554_x_at 5.963246e-03 -0.001494065 0.073572770 5.029155e-02
## X203755_at 5.048218e-02 0.020803254 0.034017519 -5.762753e-03
## X204018_x_at -4.303100e-02 0.006297370 0.002410008 1.628793e-02
## X204301_at -5.868412e-02 0.017414337 -0.105548622 8.187734e-02
## X204428_s_at 4.411842e-02 -0.030251784 0.019575773 4.591526e-02
## X204641_at 8.908725e-02 -0.004585646 0.116881504 2.091932e-02
## X204977_at -1.185717e-01 0.048490206 0.123992841 -1.655166e-02
## X205019_s_at 6.281794e-02 -0.041772593 0.009896146 1.221797e-02
## X205086_s_at 1.873212e-01 -0.180057409 -0.193487476 1.426700e-01
## X205298_s_at -3.660953e-02 -0.127240927 0.065653441 -6.913229e-02
## X205306_x_at 1.154033e-03 -0.088359584 0.198725194 -7.566443e-02
## X205392_s_at -3.728253e-02 -0.031142682 0.016626397 1.044957e-01
## X205440_s_at 2.643160e-02 -0.043382650 -0.018323306 -7.182324e-02
## X205531_s_at 4.827666e-03 0.057039474 0.049252255 1.562573e-01
## X205554_s_at -7.471365e-03 -0.101568602 0.001167145 4.690955e-02
## X205740_s_at 2.341322e-01 0.044415115 0.033770937 -1.182372e-01
## X205819_at -3.501956e-02 0.008610685 -0.037638909 -4.662232e-02
## X205858_at 1.302628e-02 0.083557865 0.048798589 2.956966e-02
## X205866_at 3.804462e-02 -0.017466206 -0.050404461 -3.823004e-02
## X205890_s_at -3.438551e-02 -0.096216046 0.117234684 1.360566e-01
## X205911_at 7.944387e-02 -0.014899198 0.061278793 -8.790990e-03
## X206380_s_at -1.231475e-02 -0.053059714 -0.016095269 -7.592095e-03
## X206453_s_at 6.666216e-02 0.032494365 -0.024762627 1.167903e-01
## X206643_at -1.297874e-01 0.104498450 -0.070983595 2.060539e-02
## X206680_at -1.155754e-02 -0.161958683 0.042483727 9.846431e-02
## X207076_s_at 5.332415e-02 -0.050783375 0.128868781 9.645908e-02
## X207218_at 7.302311e-02 0.028124296 0.060343491 -4.101132e-02
## X207262_at -6.834588e-03 -0.015567436 -0.028949896 -2.301221e-02
## X207330_at 1.955934e-01 0.065494570 0.008212686 1.422833e-01
## X207609_s_at 5.535012e-02 -0.058208218 0.024427628 -2.838599e-02
## X207804_s_at -3.728559e-02 0.024262452 -0.056862223 8.730760e-03
## X207828_s_at 2.667752e-02 -0.030361412 0.063308693 1.456638e-02
## X207995_s_at -7.473684e-02 0.080166819 -0.081028945 8.580317e-03
## X208079_s_at -8.235578e-02 -0.034857275 0.174329840 -1.111976e-03
## X208147_s_at 5.143232e-02 0.059412461 -0.081878705 -3.080534e-03
## X208816_x_at 1.102967e-01 0.164076202 -0.039466628 -1.718619e-02
## X209189_at 1.140062e-02 -0.035916171 0.019409575 -3.354574e-02
## X209219_at 1.189463e-01 -0.096357957 -0.065448619 -3.303402e-03
## X209335_at 4.989297e-02 -0.038157702 -0.029996492 4.104802e-02
## X209365_s_at 2.963373e-02 -0.030866223 -0.017499382 -6.940279e-03
## X209447_at 2.994197e-02 -0.019654746 0.112264729 -1.193530e-02
## X209458_x_at -3.520391e-02 0.001913595 0.003491531 1.505707e-02
## X209821_at 4.921816e-02 0.048540837 0.001075781 -1.653807e-01
## X209825_s_at -6.441958e-02 -0.041297440 0.010860723 -7.953082e-02
## X210095_s_at -8.849588e-02 0.043713979 -0.133043592 -1.273830e-01
## X210481_s_at -3.363548e-02 0.066688365 -0.033299753 5.457107e-02
## X210909_x_at 1.074501e-02 0.032742005 0.116047438 -2.090370e-02
## X211023_at -3.886882e-02 -0.080971177 -0.258907231 -3.211800e-02
## X211378_x_at 8.711529e-03 0.061384333 -0.065270879 3.174718e-02
## X211628_x_at 2.810873e-01 0.080882502 0.005978749 -7.290524e-02
## X211699_x_at -3.853177e-02 0.019237605 -0.015138313 1.216837e-02
## X211745_x_at -2.549459e-02 0.003637134 0.003885487 1.881101e-02
## X211765_x_at 9.007143e-03 0.068821268 -0.057849465 3.621145e-02
## X211978_x_at 1.944815e-02 0.069911015 -0.058232492 1.919334e-02
## X212149_at -1.038166e-01 -0.170008246 -0.104887758 1.277375e-01
## X212551_at 1.958738e-01 0.089903484 -0.086857885 -3.078945e-03
## X212554_at 1.290938e-01 0.048907034 -0.064216507 5.602139e-03
## X212661_x_at 3.098606e-02 0.061225224 -0.057666833 3.423362e-02
## X213068_at 6.241068e-02 -0.048025478 0.074810626 1.227427e-01
## X213629_x_at 1.623913e-01 0.088196246 0.014315806 1.417869e-01
## X214414_x_at -2.685127e-02 -0.028556785 -0.010081591 1.720669e-04
## X214421_x_at -3.366763e-02 0.020421519 -0.043054044 -7.152407e-02
## X214710_s_at 2.834893e-02 0.012680319 0.069321070 1.808921e-02
## X215138_s_at -9.933093e-02 0.153536808 -0.014989903 4.807614e-02
## X215330_at -5.492852e-02 -0.027464079 0.128058428 -1.220808e-01
## X215768_at -1.988279e-02 -0.064038707 -0.026704717 1.830372e-01
## X216025_x_at -4.191504e-02 0.012416281 -0.036425211 -7.232430e-02
## X216661_x_at -2.430035e-02 0.020917842 -0.041733416 -7.810345e-02
## X216782_at 1.425235e-01 -0.256397733 -0.009628973 1.503474e-02
## X217165_x_at 1.539250e-01 0.060436485 0.048915376 1.526447e-01
## X217319_x_at 5.856296e-02 -0.058946856 -0.056045273 4.662154e-02
## X217414_x_at -3.679113e-02 -0.002730304 -0.004184456 8.304146e-03
## X217521_at -1.127712e-01 0.046531415 -0.049357331 2.339058e-02
## X218002_s_at 2.859098e-02 -0.060855534 -0.025620977 -4.721772e-02
## X218061_at 8.755075e-02 -0.190740924 -0.182827289 -8.300111e-05
## X219485_s_at -4.584388e-02 0.026119561 0.097403585 -4.451445e-02
## X219787_s_at 3.837336e-02 0.070825281 0.093175682 1.740399e-02
## X220017_x_at -4.343756e-02 0.014591723 -0.036691661 -7.066039e-02
## X220114_s_at -1.889554e-02 0.027607563 -0.041394888 6.204635e-02
## X220116_at -5.815795e-02 0.012601517 -0.009073057 -7.072702e-02
## X220148_at 1.053330e-01 0.113151585 0.083770786 -2.917861e-02
## X220491_at 5.249454e-02 -0.096952606 -0.025954333 1.970664e-02
## X220496_at -3.455619e-05 -0.006448200 -0.071310379 -6.454065e-02
## X36829_at -7.148288e-02 -0.012794133 0.108524643 -6.858494e-02
## Dim.22 Dim.23 Dim.24 Dim.25
## X200606_at -0.2483502820 0.0163439059 -0.0152434987 0.0207527656
## X200734_s_at -0.0313076392 -0.0719860981 -0.0900478134 0.0100754115
## X200882_s_at 0.0183216151 -0.0429145824 -0.1782370346 -0.0687319112
## X200910_at -0.0103717215 -0.0606610028 -0.0419853536 -0.0590281904
## X200954_at -0.1317106496 -0.0342628657 0.1658394900 -0.1216395397
## X201128_s_at 0.0373433036 0.0010755443 0.0148705595 0.0003592647
## X201184_s_at 0.0140096515 -0.1419226335 0.1779418285 -0.0488664168
## X201293_x_at -0.0121511948 0.0538747383 -0.0187652561 0.0257987634
## X201398_s_at -0.0448709577 -0.2143726347 0.0500510436 0.0492626811
## X201441_at -0.0169620787 0.0813470565 -0.0851124841 0.1404599204
## X201453_x_at 0.1340241355 -0.0088710530 0.0234669332 0.0597981599
## X201516_at 0.0015591582 0.1214107033 0.0128535345 -0.1760564300
## X201527_at 0.0961825089 0.0074325662 -0.0623910937 0.0302438064
## X201531_at 0.0737228200 0.1061753667 -0.0244075394 0.0891007676
## X201577_at 0.0059375086 0.0358339852 0.0108159243 -0.1222089636
## X201584_s_at 0.1099764814 -0.0657908520 -0.0201726498 -0.0519024792
## X201656_at 0.0279135465 -0.0115234400 0.0876711669 0.0002196204
## X202541_at -0.0214969745 0.1532374799 -0.1276613090 0.0462428349
## X202737_s_at -0.0641232344 -0.0394377205 -0.0401547010 -0.0407684059
## X202861_at 0.1123964647 0.0513008386 -0.1140727888 -0.0117136214
## X202940_at -0.0841167349 0.0084599066 -0.1471876067 -0.0258267735
## X202963_at 0.0534485145 0.0831698546 -0.0551545737 -0.0021679095
## X203316_s_at 0.0009137549 -0.0720483503 0.0128475642 -0.0811843146
## X203554_x_at 0.0022497868 0.0117762208 0.0616839414 0.0227661711
## X203755_at -0.0396488422 -0.0488269419 0.0610413034 -0.0370074446
## X204018_x_at 0.0095647585 0.0073658552 -0.0017722376 -0.0059773172
## X204301_at 0.0468762398 0.1298872830 0.1327595613 -0.1759206371
## X204428_s_at -0.0502993819 -0.0299167134 -0.0421496401 0.0108207932
## X204641_at -0.0509918362 -0.0744445576 0.0458666702 0.0130345501
## X204977_at -0.1815311347 0.0287869209 0.0206181019 -0.2779241854
## X205019_s_at 0.0360823532 -0.0281048151 -0.0732488088 -0.0509409768
## X205086_s_at 0.1820597372 -0.1019953512 0.1067521652 -0.0556569517
## X205298_s_at 0.0460250200 0.2314925809 -0.0321984621 -0.0919153034
## X205306_x_at -0.0223132870 -0.0009361788 0.0715281897 -0.0433974755
## X205392_s_at 0.0888240767 -0.0300086845 -0.0041566056 0.0401196033
## X205440_s_at -0.0260796463 -0.0209206556 -0.0625414000 -0.0191783663
## X205531_s_at -0.0153198432 -0.0787636532 -0.0294322562 0.0074074796
## X205554_s_at -0.0359783016 0.0062956389 0.0385825155 0.0403530506
## X205740_s_at 0.1362621208 0.0167536761 -0.0937012219 0.0824644259
## X205819_at -0.0696394151 0.0294138252 0.0081728727 0.0332412359
## X205858_at 0.1116786887 -0.0202788722 -0.0387313788 -0.1031417886
## X205866_at -0.0625990843 -0.0104887797 0.0063084831 -0.0224841420
## X205890_s_at 0.0098739966 -0.0460255187 0.0497968162 0.0756633934
## X205911_at 0.1061147501 -0.0265359259 -0.1212407662 -0.1065918516
## X206380_s_at -0.0733525595 0.0210358102 0.0020429552 0.0771600863
## X206453_s_at 0.0041597668 -0.0597292898 -0.1099821758 -0.0178304553
## X206643_at -0.0164031306 0.0488038245 -0.0011461694 -0.0824338096
## X206680_at -0.0989404938 0.0533376472 -0.0279094628 0.0826614242
## X207076_s_at -0.0745558402 0.0376155874 -0.0295999032 -0.0114627666
## X207218_at 0.0167370608 0.0471293068 0.0715780307 -0.0294391955
## X207262_at -0.0535032387 0.0089004807 0.0166840002 -0.1015347671
## X207330_at -0.1510879963 0.2449320630 0.0640948302 0.0614731359
## X207609_s_at -0.0363068199 0.0194061119 -0.0466652850 -0.0535496277
## X207804_s_at -0.0270029185 0.0004878402 0.0180350550 0.0582781365
## X207828_s_at -0.0133079433 -0.0339855031 0.0503868426 0.0023796594
## X207995_s_at -0.0661700701 -0.0266863643 -0.0522719019 0.0622757172
## X208079_s_at -0.0444316654 0.0334275447 -0.0518151859 0.0846635569
## X208147_s_at -0.0183953563 -0.0227168012 -0.0600460504 -0.0526340909
## X208816_x_at 0.1142852687 -0.0457102603 0.1022847301 -0.1543495291
## X209189_at 0.0441313821 -0.0192185490 0.0025644794 0.0213496396
## X209219_at -0.0125685910 0.0404884639 -0.0131707192 -0.0644128446
## X209335_at 0.0669026855 -0.1052892311 -0.0433186269 -0.1096880926
## X209365_s_at -0.0019373718 -0.0704702754 -0.0732259382 -0.0496826688
## X209447_at 0.1833796207 -0.0454095153 0.0399420439 0.0046939589
## X209458_x_at 0.0207647643 0.0061420872 -0.0007084608 -0.0122463055
## X209821_at 0.0146985459 0.0337399483 0.2051033668 0.0932758934
## X209825_s_at -0.0129059082 -0.0455793306 0.0503490344 -0.0311375713
## X210095_s_at -0.0058542474 -0.0268830532 -0.0960869558 0.0013039052
## X210481_s_at 0.0010237412 -0.0085544683 -0.0769831573 -0.0020601210
## X210909_x_at 0.0522219800 -0.1650749071 0.0227821103 0.0818806882
## X211023_at 0.2521168629 0.1363386423 -0.0098170688 0.1036054408
## X211378_x_at -0.0249854958 0.0541357487 -0.0225696451 0.0277141114
## X211628_x_at -0.0103529177 -0.1052065789 -0.1089925323 0.0401551352
## X211699_x_at 0.0030113288 0.0033114888 -0.0080831890 0.0059899125
## X211745_x_at 0.0108199292 -0.0028167740 -0.0016467079 0.0097361651
## X211765_x_at -0.0167476293 0.0512709723 -0.0238766801 0.0259958142
## X211978_x_at -0.0205465952 0.0394246110 -0.0404775143 0.0327905407
## X212149_at 0.0509869887 -0.0660492541 -0.0395295362 0.1316209981
## X212551_at 0.0020506921 0.0009175666 -0.0035467813 -0.0882452066
## X212554_at 0.0359646997 0.0552266446 0.0021922020 -0.0697028124
## X212661_x_at -0.0060945479 0.0562167281 -0.0158345452 0.0365624381
## X213068_at 0.0633602330 -0.0173326445 -0.0833420021 -0.0984475332
## X213629_x_at 0.0576860701 -0.0535151791 0.0981825443 0.0055089000
## X214414_x_at -0.0103069199 -0.0037087107 -0.0197565666 -0.0112938032
## X214421_x_at -0.0235152260 -0.0376752789 -0.0012643218 0.0002976561
## X214710_s_at 0.0087705726 -0.0507485465 0.0594843090 0.0081563265
## X215138_s_at 0.1607312385 0.2547193141 0.0443385718 -0.0629115454
## X215330_at 0.0745851099 0.0908130318 0.2721457400 0.1533021489
## X215768_at -0.0609347991 0.0764619829 -0.0165909372 -0.1297164444
## X216025_x_at -0.0232043340 -0.0387908120 -0.0026879799 -0.0067386033
## X216661_x_at -0.0352147347 -0.0412527319 0.0140964467 -0.0073006447
## X216782_at -0.2182411998 0.0377429122 0.1117219644 0.1119551782
## X217165_x_at 0.0527865627 -0.0361055118 0.0982746529 0.0034240353
## X217319_x_at -0.0261492247 0.0171424137 -0.0110016931 -0.0359902498
## X217414_x_at 0.0089069733 0.0001180528 -0.0168026905 -0.0112324018
## X217521_at 0.0130581129 0.0649984619 0.0102925453 -0.0393809756
## X218002_s_at 0.0280782481 -0.0252687090 -0.0387257351 -0.0185238636
## X218061_at -0.0893700555 0.0850938463 0.0235767646 -0.0033642217
## X219485_s_at 0.0216136536 0.0525791483 -0.0091262996 0.0092430832
## X219787_s_at 0.0111760379 -0.0616339507 0.0163628505 -0.0210181575
## X220017_x_at -0.0261559294 -0.0385759969 0.0047551624 -0.0107247673
## X220114_s_at 0.0014034694 0.0140590799 -0.0478624385 0.0254010721
## X220116_at 0.0218015866 -0.0546351279 0.0927256106 -0.0331822958
## X220148_at 0.0661365397 0.0366914922 0.1188011781 -0.0527159761
## X220491_at -0.0369218841 -0.0090567209 0.0414792856 -0.1342232191
## X220496_at -0.0611607138 -0.0389761497 0.0075877459 0.0504699039
## X36829_at 0.1100933220 0.0515621692 -0.0163553362 -0.0161876829
## Dim.26 Dim.27 Dim.28 Dim.29 Dim.30
## X200606_at -0.0456777863 0.059864727 -0.166191709 0.028051776 -0.0813085166
## X200734_s_at -0.0293154993 0.056779141 0.052367050 0.121582917 -0.0097942712
## X200882_s_at -0.0535757259 0.077022213 -0.017836222 0.169150829 -0.0361819578
## X200910_at -0.0348585803 0.013842964 -0.049514898 0.068954936 -0.0077387519
## X200954_at -0.1173526163 0.064485603 0.110569902 -0.061188160 0.1236210474
## X201128_s_at -0.0314545398 -0.044807337 0.019022740 -0.050120188 0.0495537238
## X201184_s_at -0.0855254964 -0.036280022 0.079815462 -0.049490504 0.0089992073
## X201293_x_at 0.0162021747 -0.002404078 0.044424717 0.027959354 -0.0404754338
## X201398_s_at 0.0852358885 -0.069893607 -0.128398554 -0.018133339 -0.0900613993
## X201441_at 0.0007561435 -0.046391625 -0.241108294 -0.019443055 -0.0109943393
## X201453_x_at -0.0101681161 -0.104468431 -0.096059862 -0.002339825 0.1332203556
## X201516_at 0.0541600731 0.021385710 -0.055323705 -0.073721960 -0.0520614600
## X201527_at 0.1588590381 -0.169791179 -0.076660298 -0.087203468 0.0511013506
## X201531_at -0.0013154413 0.013032094 -0.028336790 -0.014788237 0.0443512983
## X201577_at 0.0670818669 0.038215978 0.001923507 -0.002511733 0.0269980362
## X201584_s_at -0.0079912371 -0.080050925 0.008464235 0.004224919 -0.0118072143
## X201656_at -0.1363085889 0.085906738 -0.057499279 0.057462134 -0.0235801756
## X202541_at 0.0601536240 -0.001307099 0.018486003 -0.028778560 0.0821367534
## X202737_s_at 0.0435418382 0.117584673 -0.105770299 -0.119979223 0.0168059317
## X202861_at -0.0789724294 0.062436131 0.087291470 0.035093642 -0.0706484962
## X202940_at 0.2132875361 0.008358318 0.031963066 0.113169867 0.1427219498
## X202963_at 0.0172994442 -0.069360329 0.049823677 0.105044780 0.0963230291
## X203316_s_at -0.0400962835 0.043714012 0.002329195 0.020723727 -0.0095267866
## X203554_x_at 0.0799330687 -0.026027057 0.039858872 -0.023811973 0.0110731501
## X203755_at 0.0225342838 0.007126925 0.034984019 -0.047969775 0.0357749642
## X204018_x_at 0.0172403015 0.003002305 -0.018247513 -0.002424316 0.0018532122
## X204301_at 0.0829762567 -0.213381022 -0.068011729 0.174108488 0.1857274239
## X204428_s_at -0.0133379466 -0.028573422 -0.025377960 0.022546904 -0.0583361627
## X204641_at -0.0401406988 0.034144052 0.039295188 -0.011705600 0.0379218498
## X204977_at -0.0350312532 -0.231287350 0.033472551 0.001449397 -0.2423084305
## X205019_s_at -0.0423754871 -0.062293772 -0.008725564 -0.018781700 0.0309694487
## X205086_s_at -0.1532751057 0.025692525 0.030740276 0.225673859 -0.1085497344
## X205298_s_at -0.0677455929 -0.095104578 0.014392216 -0.057730520 0.0253003972
## X205306_x_at -0.0291626118 -0.042911825 -0.109482289 0.130065425 0.0495913778
## X205392_s_at -0.0340692407 -0.027916639 0.040564373 -0.064971980 -0.0256305706
## X205440_s_at 0.0611328319 0.016634123 0.067099697 0.011547014 -0.0082742863
## X205531_s_at 0.0317811594 -0.001918718 0.146396000 0.064420165 0.0165285603
## X205554_s_at 0.0407614158 0.023260816 -0.022130526 0.005208387 -0.0488172131
## X205740_s_at -0.0176515746 -0.133601727 -0.140455724 -0.031161792 -0.2331069397
## X205819_at -0.0432321201 -0.020095010 0.006061275 0.071126698 0.0060307396
## X205858_at 0.0264323388 0.092843558 0.048755347 -0.054210790 -0.0650518164
## X205866_at -0.0052369214 0.015870436 -0.022511298 0.027288250 -0.0062592527
## X205890_s_at -0.0832587311 0.130972735 -0.154667484 -0.034176762 0.0979000288
## X205911_at -0.0491178531 -0.026082898 0.004602817 -0.086689411 -0.0327083122
## X206380_s_at -0.0516543999 -0.091244505 0.026908857 0.041091948 0.0334493760
## X206453_s_at -0.0213513081 0.023158722 0.027042764 0.058739920 -0.0181800437
## X206643_at 0.0557767825 -0.050048603 0.016991837 0.001413556 -0.0068234777
## X206680_at 0.0247509874 -0.031930791 0.046596389 -0.013728951 -0.0161769235
## X207076_s_at 0.0393891426 0.062586793 0.066629250 0.048103533 0.0398394983
## X207218_at -0.0977587935 0.003491190 -0.138455282 0.004027850 -0.0238379028
## X207262_at 0.0154813966 0.004303105 0.003611933 0.036781448 -0.0272108872
## X207330_at -0.2030177750 -0.063479189 0.065595643 0.114565516 -0.0227308184
## X207609_s_at -0.0077323223 0.065321309 -0.012940977 0.022622157 0.0158923443
## X207804_s_at -0.0440784955 0.019053355 -0.025252407 -0.027522053 0.0088996906
## X207828_s_at -0.0051332193 0.045481587 0.012737343 -0.039578279 0.0634918175
## X207995_s_at -0.0722314377 -0.024754964 0.002513481 -0.120566169 0.0329943938
## X208079_s_at 0.0368052842 0.048522866 0.074132274 0.051812832 -0.0415825183
## X208147_s_at 0.0553349305 0.107557322 0.026508378 0.018491901 0.0406851614
## X208816_x_at -0.0118531548 -0.014584029 -0.024987948 -0.024138011 0.0167596640
## X209189_at 0.0512603896 0.038729459 -0.022896164 -0.009152238 0.0051526368
## X209219_at 0.0373421307 -0.009212004 0.053600110 -0.041836331 0.0064895578
## X209335_at 0.0358929088 0.039322405 -0.047646330 0.047651769 -0.0121525427
## X209365_s_at -0.0268938688 -0.023296449 -0.028323834 0.006892106 0.0118107195
## X209447_at 0.0014106419 -0.131623699 0.035706379 -0.111458198 -0.0344327679
## X209458_x_at 0.0088608104 -0.002673105 -0.013877848 -0.008388222 0.0080041502
## X209821_at 0.1496809322 0.082025851 0.132876239 0.029584143 -0.1459035106
## X209825_s_at -0.0813544229 0.048260922 0.021948264 -0.010016602 0.0364897726
## X210095_s_at -0.1422308605 -0.021450766 -0.164216891 0.084679902 0.0797169301
## X210481_s_at -0.0850895602 -0.045483831 -0.028455980 -0.082784031 0.0740547224
## X210909_x_at 0.0246000270 0.072418274 0.021956532 -0.068415625 0.0024139675
## X211023_at -0.1275725464 0.029815912 0.130485590 -0.047389282 0.0064878314
## X211378_x_at 0.0093871373 -0.004948589 0.031777489 0.041126577 -0.0312415831
## X211628_x_at -0.0757866128 -0.149974080 0.072816853 -0.081139115 0.0193527640
## X211699_x_at 0.0209995739 0.018685732 -0.013986876 0.005368360 -0.0048352681
## X211745_x_at 0.0069361656 -0.002672558 -0.012938360 -0.006131449 0.0104646783
## X211765_x_at 0.0151080805 -0.005769787 0.037217455 0.027165719 -0.0324074411
## X211978_x_at 0.0232610271 0.011905297 0.046000529 0.023975426 -0.0418055921
## X212149_at 0.1189021324 0.016869845 -0.012035185 0.085647296 0.0113987298
## X212551_at 0.0483095619 0.039797625 0.045591599 -0.039193290 0.1222441553
## X212554_at 0.0329924735 0.057731305 0.015995308 -0.011767408 0.1272965512
## X212661_x_at 0.0094156261 -0.007501028 0.042019449 0.016518213 -0.0459747788
## X213068_at -0.0307032940 0.027888133 0.035866677 -0.008593879 0.0105034408
## X213629_x_at 0.1169679107 -0.035972064 -0.027136810 0.053673194 -0.0368171344
## X214414_x_at 0.0047083477 0.004164106 -0.006850334 -0.004960667 0.0074539910
## X214421_x_at 0.0321890893 -0.050892045 0.039265289 -0.034708991 0.0024325385
## X214710_s_at 0.0849159841 -0.003728716 0.008294742 -0.070578805 0.0089616230
## X215138_s_at 0.1246820549 0.146690758 -0.087643316 -0.059746041 -0.1177285469
## X215330_at 0.0349336959 0.056365449 -0.022287323 0.070412428 0.0174175377
## X215768_at -0.0680767147 0.176347350 -0.043268302 -0.189643678 -0.0285450508
## X216025_x_at 0.0295976084 -0.069887615 0.035003608 -0.028191490 0.0004132338
## X216661_x_at 0.0210462849 -0.053885020 0.024913779 -0.047932455 0.0143367956
## X216782_at -0.0036351828 -0.123510547 0.032701411 -0.118809608 -0.0172602897
## X217165_x_at 0.0963021857 -0.039811149 -0.028864133 0.063260563 -0.0477892483
## X217319_x_at 0.0452864458 0.013926998 -0.015333012 0.001072439 -0.0732510356
## X217414_x_at 0.0094705666 0.012736324 -0.018758624 -0.004580852 -0.0142283794
## X217521_at 0.0377782676 -0.048649060 0.039627737 -0.018648581 0.0417154634
## X218002_s_at -0.0143256722 -0.012230337 -0.059012047 0.039273106 0.0210877267
## X218061_at 0.0197285444 0.038600352 -0.031053900 -0.035395992 -0.0466508567
## X219485_s_at 0.0472252322 0.009389951 -0.054718288 0.059785764 -0.0330811295
## X219787_s_at -0.0024455561 -0.014839082 0.005485795 0.003021933 -0.0127872030
## X220017_x_at 0.0246422754 -0.067636988 0.035369777 -0.030477976 0.0005042448
## X220114_s_at -0.0315311305 0.014175515 -0.008402659 -0.062764213 0.0104551012
## X220116_at 0.0252352327 -0.076844230 -0.065054161 -0.018700253 0.0306621699
## X220148_at -0.1157971737 0.023562554 -0.142174253 -0.033075071 0.0657510836
## X220491_at 0.1493406624 0.092260068 -0.104304179 0.022781209 -0.0218869719
## X220496_at 0.0019285284 0.016979604 -0.042411228 0.019758505 -0.0204509526
## X36829_at -0.0530433806 0.010597415 0.094486120 -0.001768942 -0.0423485994
## Dim.31 Dim.32 Dim.33 Dim.34
## X200606_at 6.939658e-02 0.072449228 -0.1096354697 0.0488324144
## X200734_s_at -7.078692e-02 0.148062941 -0.0339163301 0.0778203116
## X200882_s_at -9.875026e-02 -0.084420223 -0.0585273628 0.0127828062
## X200910_at -7.173281e-02 -0.070180319 -0.0400265179 -0.0006022491
## X200954_at 1.358128e-01 -0.042103431 0.0549259907 0.0028239522
## X201128_s_at 9.771539e-02 0.097114696 0.0259164030 0.0076603039
## X201184_s_at -3.454339e-02 -0.144378178 0.0490140895 -0.0991467338
## X201293_x_at -5.031567e-03 0.022007791 -0.0404300583 -0.0056541355
## X201398_s_at 1.554138e-02 -0.019860089 -0.0780463268 -0.0868209912
## X201441_at -3.968322e-02 -0.137821310 -0.0542042599 0.0538865208
## X201453_x_at 8.468744e-02 0.078295696 0.0387559200 -0.1595961301
## X201516_at -2.245193e-01 0.079852150 0.0459313856 -0.0135985997
## X201527_at 6.003366e-02 0.097173595 0.0048414436 0.0658001306
## X201531_at 1.080625e-01 0.004367856 0.0473520309 -0.1026118820
## X201577_at -4.942557e-02 0.008752623 -0.0341625506 -0.0159412136
## X201584_s_at 1.912827e-02 0.036180034 -0.0784658666 0.1193579399
## X201656_at 4.284733e-03 -0.178769722 0.0101238927 0.0161421971
## X202541_at -1.295094e-01 -0.049816634 0.2900575467 0.0892113860
## X202737_s_at 2.961657e-02 -0.083553015 0.0581103745 -0.0756115381
## X202861_at 1.992692e-03 -0.056553473 -0.0371170536 -0.0792297025
## X202940_at 2.500402e-02 0.102486897 -0.0414210696 -0.0604994114
## X202963_at -1.125294e-02 -0.052262127 0.0504171789 -0.0434444483
## X203316_s_at 1.884385e-02 -0.017505312 -0.0436125026 -0.0407697349
## X203554_x_at 2.959643e-02 -0.011679152 -0.0340471813 0.0355292015
## X203755_at 2.022709e-02 -0.030759091 -0.0100907421 -0.0225003451
## X204018_x_at -1.843251e-02 -0.029348469 -0.0116671904 -0.0004570804
## X204301_at -1.115006e-02 -0.099757635 -0.0797522963 0.0708153177
## X204428_s_at 6.378432e-03 -0.040041092 -0.0224192647 -0.0353864018
## X204641_at 3.082137e-02 -0.052431777 -0.0134633367 0.0112712284
## X204977_at 1.933588e-02 0.021824990 0.1308201608 -0.0100507924
## X205019_s_at 3.056243e-02 0.011578602 -0.0077588269 -0.0246960989
## X205086_s_at -1.114983e-03 0.143338401 0.1812051233 0.0552907920
## X205298_s_at 6.711760e-02 -0.099735989 -0.1429759073 0.0176623154
## X205306_x_at 1.607858e-02 0.082061631 0.0413559925 -0.0161016791
## X205392_s_at 1.384321e-02 0.061262246 -0.0614820506 0.0281970004
## X205440_s_at 2.545082e-02 -0.044816105 0.0144466595 0.0535695352
## X205531_s_at 3.100159e-03 -0.065659367 0.0530106010 -0.0546084088
## X205554_s_at 2.432248e-02 -0.023336257 -0.0179741026 -0.0001587863
## X205740_s_at -6.046539e-02 -0.076991246 0.0703449136 -0.0570927821
## X205819_at 4.627283e-02 -0.010099501 0.0635673058 -0.1085185042
## X205858_at -9.411682e-02 0.025772046 -0.0963146585 -0.0873425750
## X205866_at 3.509463e-02 -0.037455381 0.0139353052 0.0280933779
## X205890_s_at -5.445670e-02 0.038050550 0.0429104808 0.0575136607
## X205911_at -8.356762e-02 0.003557991 -0.0293325671 0.0262575166
## X206380_s_at 3.920954e-02 0.036086925 0.0595545990 0.0085621629
## X206453_s_at 5.367060e-02 0.043198454 -0.0766791967 0.0646363325
## X206643_at 6.920504e-03 -0.016728151 0.0404080979 0.0074521377
## X206680_at 8.225726e-02 -0.005762951 0.0113230158 0.0162373893
## X207076_s_at -1.770926e-02 -0.053488064 0.0261549724 0.0425700371
## X207218_at -2.137134e-02 -0.062160444 0.0049069121 0.0192600988
## X207262_at -8.623538e-03 0.026023075 0.0183555710 -0.0530112243
## X207330_at -7.348486e-02 0.078968114 -0.1736042244 -0.0707180602
## X207609_s_at 1.460287e-02 0.045703276 -0.0055779243 0.0242474945
## X207804_s_at -3.729697e-02 0.003533361 0.0178809102 0.0181813138
## X207828_s_at 4.379099e-02 -0.034478670 -0.0002346551 -0.0142978218
## X207995_s_at -1.398094e-01 -0.002915235 -0.0002029745 -0.0097937339
## X208079_s_at 5.397110e-02 -0.111015892 -0.0110125803 -0.0381104115
## X208147_s_at -1.835868e-02 -0.071569699 0.0232441154 -0.0566069162
## X208816_x_at -5.372018e-02 -0.004401673 -0.0178863197 0.0359108757
## X209189_at 2.703438e-02 0.006525591 0.0653090239 -0.0681221226
## X209219_at 7.633794e-02 0.013996183 -0.0482307652 0.0134756321
## X209335_at 3.248310e-02 -0.025356787 -0.0289214322 0.0206608891
## X209365_s_at 1.379239e-02 -0.041306125 -0.0080221387 -0.0035224232
## X209447_at 2.270297e-02 0.059361805 -0.0718370607 -0.0036893041
## X209458_x_at 2.727898e-03 -0.013466253 -0.0150196233 -0.0040887016
## X209821_at 2.236235e-02 -0.073046339 0.0062609354 0.0562009794
## X209825_s_at -6.806522e-03 -0.032250507 -0.0056769862 -0.0457182863
## X210095_s_at 1.022391e-01 -0.016236418 0.0834640950 -0.0164003094
## X210481_s_at -1.218442e-01 -0.024448634 -0.0207300212 -0.0225223482
## X210909_x_at -3.405968e-02 0.125223239 -0.0399079076 -0.0342969510
## X211023_at 2.843504e-02 -0.048279340 -0.0407862824 0.0039537025
## X211378_x_at -1.408322e-02 0.020888597 -0.0328631128 0.0014455500
## X211628_x_at 1.292318e-01 -0.069870841 0.0304215359 0.2016178466
## X211699_x_at -7.756816e-03 -0.020171060 -0.0083585609 0.0031099804
## X211745_x_at -2.336840e-03 -0.017032244 -0.0070603750 -0.0035246296
## X211765_x_at -1.058540e-02 0.023796933 -0.0435345446 0.0067846607
## X211978_x_at -2.765534e-02 0.015755937 -0.0367649343 0.0105309978
## X212149_at 1.875238e-03 -0.084048029 -0.0251987524 0.0126801214
## X212551_at -9.675054e-02 0.017554764 -0.0101582136 -0.0776842621
## X212554_at -5.226450e-02 -0.021724447 -0.0077294864 -0.0627247084
## X212661_x_at -1.013132e-02 0.014447310 -0.0362939882 0.0070729112
## X213068_at 5.936115e-02 0.047849050 0.0258515278 0.0057168756
## X213629_x_at -1.432438e-03 -0.061327942 -0.0096196685 -0.0752443980
## X214414_x_at -6.498833e-03 -0.030603892 0.0068466596 0.0315250084
## X214421_x_at -1.581775e-02 0.012965517 0.0283157653 0.0342211442
## X214710_s_at 1.152751e-05 0.025297118 -0.0752141716 0.0355602753
## X215138_s_at 1.181498e-01 0.007325974 0.1209395787 -0.0235923613
## X215330_at -1.246367e-01 0.059231852 -0.0041857515 0.1913813333
## X215768_at 6.944217e-02 0.074142388 -0.0320585759 0.0810849273
## X216025_x_at -1.433775e-02 0.013808013 0.0376484876 0.0345219123
## X216661_x_at -1.143526e-02 0.015416436 0.0354241952 0.0269393066
## X216782_at -1.313731e-01 0.031101588 0.0251003263 -0.1072177586
## X217165_x_at 2.240909e-02 -0.050368206 -0.0232696974 -0.0658476270
## X217319_x_at 4.518420e-02 -0.024347557 -0.0059326326 0.0165531120
## X217414_x_at -9.206188e-03 -0.020630762 -0.0037076199 0.0103068234
## X217521_at -1.015476e-02 -0.031970086 0.0174179312 0.0130961424
## X218002_s_at 4.555660e-02 0.006093881 -0.0054158275 0.0318541745
## X218061_at 1.877864e-01 -0.007105813 -0.0404312451 -0.0092216763
## X219485_s_at 4.674141e-02 0.169909887 -0.0042730679 -0.1644906966
## X219787_s_at 2.875669e-02 -0.009068829 0.0147185887 -0.0006261756
## X220017_x_at -1.974897e-02 0.008634617 0.0290229661 0.0371899723
## X220114_s_at -4.293170e-02 -0.036460082 0.0279420727 0.0100691174
## X220116_at -5.911759e-02 -0.069860579 -0.0993950374 -0.0346619392
## X220148_at 4.002583e-02 0.057406820 -0.0103102846 -0.0161650556
## X220491_at 1.329051e-02 -0.045342803 -0.0418861061 0.1040148371
## X220496_at 1.451460e-02 -0.004241858 0.0393278525 -0.0166015356
## X36829_at 5.210830e-02 -0.043692349 -0.0561791802 -0.0555210876
## Dim.35 Dim.36 Dim.37 Dim.38
## X200606_at -0.0060848407 -0.0060643279 -1.692979e-02 8.812210e-03
## X200734_s_at -0.0392673418 0.0916418111 -1.775379e-02 4.176175e-02
## X200882_s_at 0.1268438513 0.0875907652 2.987807e-02 1.909486e-02
## X200910_at 0.0858837606 0.0297967233 -3.014779e-02 2.631356e-02
## X200954_at -0.0021879138 0.0604548010 -2.797499e-02 -9.442333e-02
## X201128_s_at 0.0036992633 0.0832734616 1.357782e-02 1.761171e-02
## X201184_s_at 0.0811681624 -0.0760093437 -8.600345e-02 3.829404e-02
## X201293_x_at 0.0362024272 -0.0239777530 -2.548922e-02 2.309222e-02
## X201398_s_at 0.0168808900 0.0462642524 5.746374e-02 -4.072347e-02
## X201441_at -0.0497452102 0.0429459681 -5.376572e-02 -3.389886e-02
## X201453_x_at -0.0228888977 0.0725837725 1.080432e-02 3.668487e-04
## X201516_at 0.0662180466 0.0061793422 1.846900e-02 -2.896694e-02
## X201527_at 0.0661205890 0.0821208101 1.373091e-01 -2.487285e-02
## X201531_at -0.0753672738 0.0844469599 3.942739e-03 7.259001e-02
## X201577_at 0.0069577152 -0.0785050843 3.096095e-02 3.646293e-02
## X201584_s_at -0.0122737248 -0.0009889240 3.396296e-02 1.171180e-02
## X201656_at 0.0332178734 0.0966535162 4.381328e-02 7.816111e-02
## X202541_at 0.0198211979 0.0079644560 4.365075e-02 4.434085e-03
## X202737_s_at -0.0979706502 -0.0854132936 6.187356e-02 2.181149e-01
## X202861_at -0.0057575285 -0.0225647463 9.527221e-02 -4.226172e-02
## X202940_at -0.0194919614 0.0591182943 3.741567e-02 2.594088e-02
## X202963_at 0.0425000209 -0.0283928773 2.806164e-02 1.686059e-03
## X203316_s_at 0.0319862343 0.0255862929 1.253566e-02 -1.448349e-02
## X203554_x_at -0.0720528211 0.0005505406 -9.462785e-03 -1.188575e-02
## X203755_at -0.0792593842 0.0142908753 -1.586339e-02 -1.478886e-02
## X204018_x_at 0.0045131158 -0.0128965705 -2.109871e-03 -1.339401e-05
## X204301_at -0.0291857191 -0.0298395406 7.118600e-02 1.507549e-01
## X204428_s_at -0.0379990974 0.0642260069 -4.747783e-02 1.427138e-02
## X204641_at -0.0634114244 0.0989071426 -3.755420e-02 -3.027339e-02
## X204977_at -0.0914141679 0.0056128817 -5.905190e-02 1.279380e-02
## X205019_s_at -0.0035375745 0.0042999583 -3.360497e-02 1.679934e-02
## X205086_s_at -0.0671254542 0.0349256052 5.076887e-02 9.351592e-03
## X205298_s_at 0.0061960150 0.0322833464 -9.564107e-02 5.211497e-02
## X205306_x_at 0.0753909025 0.0199111864 -9.498996e-02 -2.157678e-02
## X205392_s_at -0.0370991607 0.0744522349 2.372558e-02 3.010253e-02
## X205440_s_at 0.0904314203 0.0477615562 -1.210856e-01 -4.696568e-03
## X205531_s_at -0.0037729472 -0.0423187804 -5.377122e-02 7.489037e-03
## X205554_s_at -0.0286333882 0.0445333213 6.610803e-03 2.715103e-03
## X205740_s_at -0.0343296504 -0.0488743404 -9.077552e-02 -5.485046e-02
## X205819_at -0.0267537182 -0.1346912893 4.741900e-02 -6.987243e-02
## X205858_at 0.0319442021 -0.0583242000 1.125608e-01 4.874836e-02
## X205866_at -0.0151341987 -0.0264078827 2.869702e-02 -6.585893e-02
## X205890_s_at 0.0431079393 -0.1771619403 -1.098918e-02 6.276411e-02
## X205911_at 0.0529671193 0.0073677026 1.486108e-02 5.176243e-02
## X206380_s_at 0.0245052803 -0.1180662266 2.895437e-02 -1.149315e-02
## X206453_s_at -0.0205415653 0.0241330833 -8.781195e-02 8.219796e-02
## X206643_at 0.0053444687 0.0294200922 -5.231522e-04 1.720868e-02
## X206680_at -0.0309716737 -0.0383696796 1.345780e-02 -3.094540e-02
## X207076_s_at 0.0456067798 0.0369980216 3.302486e-03 7.600177e-03
## X207218_at -0.0556000882 0.0356600127 1.342719e-01 2.175791e-02
## X207262_at -0.0095684020 0.0452236762 -7.820420e-02 5.900605e-02
## X207330_at -0.0218974350 -0.0268321121 -3.062780e-02 2.225331e-02
## X207609_s_at 0.0344813798 0.0031316568 -2.827622e-02 -3.748218e-03
## X207804_s_at 0.0087452054 0.0572973039 4.699288e-02 1.188788e-02
## X207828_s_at -0.0495873799 0.0523906869 -1.769299e-02 -1.348864e-02
## X207995_s_at -0.0239713387 0.0826536542 -1.573371e-02 2.345048e-02
## X208079_s_at -0.0246083334 -0.0090349218 3.184449e-02 -5.166186e-02
## X208147_s_at -0.1093470486 -0.1197443162 5.981540e-02 5.414116e-02
## X208816_x_at -0.0851391736 0.0097658606 1.646389e-02 -2.145116e-02
## X209189_at -0.0462513246 0.1016313402 -6.904326e-02 1.047298e-01
## X209219_at 0.0486786742 -0.0462295619 -4.317921e-02 1.254148e-02
## X209335_at -0.1083307093 0.0152666319 -4.161128e-03 -5.655468e-02
## X209365_s_at -0.0065848211 0.0259448839 -2.593526e-02 -1.003176e-02
## X209447_at 0.0059602488 -0.0979644365 -1.155935e-01 1.017966e-01
## X209458_x_at 0.0108291437 -0.0221593492 -3.837378e-04 -9.296573e-03
## X209821_at 0.0731448328 0.0524672445 6.542343e-02 5.679172e-02
## X209825_s_at 0.0766463697 0.0707198681 3.890470e-03 1.290715e-01
## X210095_s_at 0.1478954366 -0.0674984599 -5.348356e-02 -2.348971e-02
## X210481_s_at -0.0867295439 0.0693563489 6.106134e-03 -1.138169e-02
## X210909_x_at 0.0524343801 -0.0802017277 -9.083446e-02 1.233721e-01
## X211023_at -0.0419759593 0.0133055131 -1.938224e-03 -8.665847e-02
## X211378_x_at 0.0253941650 -0.0240553203 -1.841482e-02 6.484884e-03
## X211628_x_at 0.1347642783 -0.0949099300 5.034109e-02 3.898930e-02
## X211699_x_at -0.0040707929 -0.0069638203 -2.552692e-03 -1.264817e-02
## X211745_x_at 0.0089313166 -0.0189864000 -1.372544e-02 -4.839121e-03
## X211765_x_at 0.0389991634 -0.0254417615 -2.771858e-02 2.600981e-02
## X211978_x_at 0.0300938701 -0.0111368382 3.187705e-05 1.144263e-02
## X212149_at -0.0477347942 0.0249489905 -1.397640e-01 -1.836107e-02
## X212551_at 0.0274174922 -0.0229414973 -9.771559e-02 -9.645842e-02
## X212554_at -0.0024163816 -0.0031054612 -1.001927e-01 -6.997255e-02
## X212661_x_at 0.0358813865 -0.0344257073 -1.439617e-02 2.536533e-02
## X213068_at -0.0363902640 0.0445284120 -3.601788e-02 -3.307723e-02
## X213629_x_at 0.1563240052 0.0615646801 2.501982e-02 -2.370715e-02
## X214414_x_at 0.0036577426 0.0019790753 -1.566116e-02 9.392536e-03
## X214421_x_at 0.0197657629 0.0035745023 5.402622e-03 -4.681549e-03
## X214710_s_at -0.0601169886 -0.0042405234 1.632740e-03 -5.504371e-02
## X215138_s_at 0.0653515205 0.0250427886 -1.263636e-01 3.524701e-02
## X215330_at -0.0417276899 -0.0339869340 -5.877448e-02 1.461912e-03
## X215768_at 0.1266191442 0.0382528815 4.307754e-02 -8.521437e-02
## X216025_x_at 0.0202564956 0.0060891554 -2.819256e-03 -6.683884e-03
## X216661_x_at 0.0245426871 0.0024837956 7.495762e-03 2.053769e-04
## X216782_at 0.0501838872 0.0845420839 5.490963e-02 3.836666e-02
## X217165_x_at 0.1586923357 0.0835692280 2.868168e-02 -2.459905e-02
## X217319_x_at -0.0984750615 -0.0623426132 1.667360e-02 4.964857e-02
## X217414_x_at 0.0063351131 -0.0124995335 -9.244459e-05 2.797841e-03
## X217521_at 0.0067907452 -0.0011784033 -1.616297e-02 -8.262788e-03
## X218002_s_at -0.0192171966 -0.0193656162 5.710665e-03 -1.683199e-02
## X218061_at 0.0379836611 -0.0016078683 3.489220e-02 7.910993e-02
## X219485_s_at 0.0328258483 -0.0722544417 4.246099e-02 -5.367913e-02
## X219787_s_at -0.0603992578 -0.0108125974 9.623579e-03 -8.261999e-03
## X220017_x_at 0.0168255389 0.0050985568 1.584571e-04 -1.166920e-02
## X220114_s_at -0.0391191175 0.0758873416 -8.889435e-03 -1.857987e-02
## X220116_at 0.0334068042 -0.0903427794 -1.149170e-02 -1.271897e-01
## X220148_at 0.0277516584 0.0357255490 1.893776e-02 -1.839104e-02
## X220491_at -0.0642340099 -0.0528796912 -8.989351e-03 -1.048632e-01
## X220496_at 0.0189363979 -0.0315944487 2.217730e-02 -1.213207e-02
## X36829_at 0.0008645892 -0.0358203288 1.260775e-01 -5.197823e-02
## Dim.39 Dim.40 Dim.41 Dim.42
## X200606_at 0.0291793452 -0.0693044519 -2.234177e-02 -3.704629e-02
## X200734_s_at 0.0583941771 -0.0389805745 -3.405717e-02 2.448196e-02
## X200882_s_at -0.0567912548 0.0383106282 -1.201544e-01 1.433895e-02
## X200910_at -0.0305695510 -0.0335421708 -6.259567e-02 -6.302490e-03
## X200954_at -0.0021376850 0.0146728066 -1.885258e-02 1.122582e-01
## X201128_s_at 0.0319163041 0.0611928478 -2.410073e-02 7.256126e-02
## X201184_s_at 0.0224565316 -0.0281795770 -8.627671e-02 -3.303011e-02
## X201293_x_at 0.0091964362 0.0246003696 -6.654382e-03 5.429318e-04
## X201398_s_at -0.0142873341 0.0454713987 -1.283802e-02 -2.268799e-02
## X201441_at -0.0020359027 -0.1503840124 3.438310e-02 4.776341e-02
## X201453_x_at -0.0428566448 -0.0082010775 -6.539633e-02 3.177858e-02
## X201516_at -0.0173568048 -0.0347179086 -1.505616e-02 2.821183e-02
## X201527_at -0.0687000929 0.0722716016 -2.257970e-02 -1.066087e-01
## X201531_at 0.1091870506 -0.1276220055 -5.317513e-02 1.816896e-02
## X201577_at 0.0256446135 -0.0603878686 2.192610e-02 -8.075106e-02
## X201584_s_at 0.0963971180 0.0084740775 -2.352492e-02 -1.805160e-03
## X201656_at 0.0252016936 -0.0040643426 -4.180080e-03 -6.606630e-03
## X202541_at 0.0959412794 0.0023696350 -6.124135e-02 1.960446e-02
## X202737_s_at -0.1078587825 0.0648613899 -1.845683e-03 -7.020719e-02
## X202861_at 0.0268834303 0.0120468030 7.482174e-02 -6.474727e-02
## X202940_at -0.0291521586 -0.0276826744 1.937548e-02 -3.608750e-02
## X202963_at -0.0398936224 0.0505332170 -1.053979e-01 -2.058595e-02
## X203316_s_at -0.0978166383 -0.0649088204 -1.603413e-02 1.367845e-02
## X203554_x_at -0.0100599717 -0.0181142702 1.949903e-03 -9.246032e-03
## X203755_at -0.0068707143 0.0646476173 1.645754e-02 -1.507516e-02
## X204018_x_at 0.0011993082 0.0137076768 -7.926128e-04 -1.287614e-02
## X204301_at 0.0073482818 -0.0850657373 1.102360e-01 8.170794e-02
## X204428_s_at -0.0089446984 0.0046866017 -4.610590e-02 1.018116e-02
## X204641_at -0.0188075308 -0.0200224998 -3.484639e-02 5.508732e-02
## X204977_at -0.0141552551 0.0484093461 4.737400e-02 -2.478077e-02
## X205019_s_at 0.0150610031 0.0072754212 -5.377345e-02 -4.620283e-03
## X205086_s_at 0.0445972474 -0.0708714378 5.501415e-02 -6.029367e-02
## X205298_s_at -0.0178881335 -0.0463074258 -7.636264e-03 -4.750444e-02
## X205306_x_at 0.0566114864 0.1123554955 7.703830e-02 -6.276442e-02
## X205392_s_at -0.0054092418 0.0367705209 3.391229e-02 2.774364e-02
## X205440_s_at -0.0251268703 -0.0396917639 1.712712e-01 -6.121019e-02
## X205531_s_at -0.0507987789 -0.0146006475 3.359294e-02 -5.448726e-02
## X205554_s_at 0.0155327056 0.0766101784 -1.867985e-02 -2.057618e-02
## X205740_s_at -0.0133736414 -0.0166630644 9.558186e-03 6.876117e-02
## X205819_at -0.0654723719 -0.0947834532 2.090231e-02 5.087398e-02
## X205858_at -0.0115974448 -0.0252491924 3.649194e-02 1.884846e-01
## X205866_at 0.0165267802 -0.0035688045 -5.472305e-02 1.305082e-02
## X205890_s_at 0.0814098811 -0.0458344267 9.810889e-02 2.182378e-02
## X205911_at 0.0312128649 0.0377130140 -1.989405e-02 3.515316e-02
## X206380_s_at 0.0257872593 -0.0299809683 -7.656762e-02 -4.616549e-02
## X206453_s_at -0.0261998294 0.0283844118 -5.639417e-02 3.495673e-02
## X206643_at -0.0187412350 -0.0030557604 -6.256422e-02 2.955858e-02
## X206680_at -0.0050362916 -0.0650765019 -4.067256e-02 5.845313e-02
## X207076_s_at 0.0249332854 0.0389373648 3.045242e-02 -2.916448e-02
## X207218_at 0.0034861711 0.0632901066 -2.972244e-02 -5.494459e-02
## X207262_at -0.0447797100 -0.0631202638 -5.216724e-03 1.059444e-01
## X207330_at -0.0050645620 0.0336678534 -3.340060e-02 -5.960692e-02
## X207609_s_at 0.0304074243 0.0018916940 -8.480504e-02 -2.223951e-02
## X207804_s_at -0.0112956435 0.0519713358 1.822804e-05 -2.571600e-02
## X207828_s_at -0.0178394424 -0.0180739397 -1.185866e-02 2.425442e-02
## X207995_s_at -0.0008241376 0.0403858590 1.325591e-01 -2.051378e-02
## X208079_s_at 0.0222623543 0.0172344224 7.469147e-02 -3.258818e-02
## X208147_s_at -0.0557828836 0.0641289070 -3.681299e-02 2.469083e-02
## X208816_x_at -0.0098226374 -0.0575031688 -1.437999e-02 -7.308162e-02
## X209189_at 0.0942015994 -0.1062080852 -2.174290e-02 -6.958474e-02
## X209219_at 0.0404263004 0.0092624258 -3.051507e-03 -1.755690e-02
## X209335_at 0.0004422173 -0.0268550015 -5.401651e-02 -4.322389e-02
## X209365_s_at -0.0022287682 0.0139708338 -7.447148e-02 -8.028504e-03
## X209447_at 0.1076516142 0.0778652744 -5.193592e-02 5.151313e-02
## X209458_x_at 0.0019180652 0.0113165931 1.000909e-02 -1.982791e-02
## X209821_at 0.1277464570 -0.0014794799 -2.931438e-02 -1.428878e-02
## X209825_s_at 0.0283674297 -0.0060375320 4.086643e-02 -7.615193e-02
## X210095_s_at -0.0094502634 0.1199574379 6.878729e-02 8.356962e-02
## X210481_s_at 0.0460226556 0.0509310649 9.050122e-02 -4.644151e-03
## X210909_x_at -0.0408458310 -0.0510328430 -1.532770e-02 -4.388525e-02
## X211023_at -0.0434657843 0.0162812514 -1.473469e-02 1.668669e-02
## X211378_x_at 0.0132374156 0.0157091515 -4.373573e-03 3.976617e-03
## X211628_x_at -0.0524040949 -0.0524249416 4.804294e-03 -3.726544e-02
## X211699_x_at -0.0034331150 -0.0045381343 2.627706e-03 -1.775146e-02
## X211745_x_at 0.0139137668 -0.0003920975 -4.722000e-03 7.251369e-03
## X211765_x_at 0.0134056344 0.0238291725 -4.568700e-03 4.190909e-04
## X211978_x_at 0.0084700787 0.0247970986 -9.362537e-03 -3.612533e-03
## X212149_at 0.0414485444 0.0030930599 7.995545e-02 -1.440394e-03
## X212551_at 0.0583809881 0.0638401106 -1.494859e-02 -2.849108e-02
## X212554_at 0.0256970578 0.0401293566 -9.736839e-04 -1.386089e-02
## X212661_x_at 0.0209923289 0.0244882046 -1.652786e-03 6.505060e-03
## X213068_at -0.1887514003 -0.0387063052 8.722126e-02 -6.254973e-02
## X213629_x_at -0.0378192253 -0.0001923860 2.368074e-02 4.872011e-02
## X214414_x_at -0.0010106009 0.0153562207 -6.310232e-03 -5.070945e-04
## X214421_x_at -0.0067382413 -0.0447944272 2.155041e-02 -8.819638e-06
## X214710_s_at 0.0161313933 -0.0233645693 1.220210e-02 8.053637e-03
## X215138_s_at -0.0586600557 0.0090944051 -2.860009e-02 -6.771954e-02
## X215330_at -0.2466442785 0.0696759199 -3.612702e-02 2.323653e-02
## X215768_at -0.0202602944 -0.1230458832 -1.196990e-02 1.796200e-02
## X216025_x_at -0.0143135350 -0.0492876606 2.025602e-02 -1.197792e-03
## X216661_x_at -0.0056837214 -0.0372602701 1.489161e-02 -1.409464e-02
## X216782_at -0.0022918902 -0.0070316242 -2.352127e-02 3.049127e-03
## X217165_x_at -0.0286477568 -0.0013711341 3.491807e-02 6.039455e-02
## X217319_x_at -0.0458904422 0.0362123969 -3.053177e-02 8.388561e-03
## X217414_x_at 0.0007833061 0.0102788107 2.660464e-03 -1.900471e-03
## X217521_at 0.0280092783 -0.0277858191 -4.411349e-02 2.276842e-02
## X218002_s_at 0.0273372391 0.0074373776 -1.178524e-01 -2.370603e-02
## X218061_at 0.0126267564 0.1066748614 6.163350e-02 1.368689e-02
## X219485_s_at 0.0135341731 -0.0279226546 4.077735e-02 9.755414e-03
## X219787_s_at 0.0077660472 0.0494096288 1.602365e-02 7.925516e-02
## X220017_x_at -0.0152441130 -0.0451777490 9.658363e-03 3.191173e-03
## X220114_s_at -0.0124313355 0.0572568226 5.661871e-03 -6.105509e-02
## X220116_at 0.0186795642 -0.0695832221 -6.218991e-02 -1.680703e-01
## X220148_at 0.0301334768 0.0323938092 1.808655e-02 -4.353024e-02
## X220491_at 0.1401539962 0.0955740378 4.606509e-03 4.727757e-02
## X220496_at 0.0135080173 -0.0020896559 -7.123807e-02 -4.657781e-02
## X36829_at 0.0465108733 -0.0044366725 7.466246e-02 -5.906676e-02
## Dim.43 Dim.44 Dim.45 Dim.46
## X200606_at 8.336054e-02 -0.0194466809 -0.0164012084 -0.0954014050
## X200734_s_at -5.090899e-02 0.0387470465 -0.0181827659 0.0353094943
## X200882_s_at -3.165688e-02 0.0511332571 -0.0269695644 0.0201219247
## X200910_at -6.266570e-02 0.0010056412 -0.0491346077 -0.0584450107
## X200954_at -3.445734e-02 -0.0259615806 -0.0105623886 -0.0432959883
## X201128_s_at 1.912623e-02 -0.0317665231 -0.0781658355 -0.0013657313
## X201184_s_at 4.901325e-02 0.0494312761 0.0508091781 -0.0298335759
## X201293_x_at -1.267114e-02 0.0214179049 -0.0274943676 0.0062975602
## X201398_s_at -4.021166e-02 0.1663582785 -0.0101385529 -0.0407156698
## X201441_at 1.692763e-02 -0.0458679620 -0.0152554021 -0.1304208903
## X201453_x_at 2.434078e-02 0.0017417469 0.0822521500 0.0804542907
## X201516_at 1.040386e-01 -0.0685444461 0.0532099426 -0.0637192417
## X201527_at -1.163583e-02 -0.0976026247 0.0330055191 0.0150492052
## X201531_at -3.681280e-03 0.0288046560 0.0059950040 0.0190209517
## X201577_at -2.629786e-02 -0.0398258706 0.0949775004 -0.0291871536
## X201584_s_at -3.798436e-02 -0.0634774768 0.0133160586 0.0322214704
## X201656_at -1.107913e-01 -0.1261414526 0.1595855319 0.0746602479
## X202541_at -6.692378e-02 0.0750797656 0.0197813787 -0.0105799163
## X202737_s_at 1.318772e-02 -0.0397490773 -0.0628475672 -0.0460010056
## X202861_at -2.521686e-02 -0.0265561549 -0.0567784298 -0.0437168668
## X202940_at -3.564948e-02 0.0361549340 -0.0057934590 -0.0213850626
## X202963_at -4.200972e-02 -0.0410866962 -0.0515435531 -0.0410084422
## X203316_s_at -7.359213e-02 0.0711908515 0.0116019914 -0.0426793003
## X203554_x_at 2.100865e-02 -0.0391033832 0.0579881405 0.0119869913
## X203755_at 6.007176e-02 0.0282338978 -0.0016640307 0.0098192509
## X204018_x_at -1.029525e-03 -0.0129758889 -0.0023755372 0.0039211988
## X204301_at 1.893340e-02 0.0408802004 -0.0933701186 0.0532760526
## X204428_s_at -1.994688e-02 0.0314886023 -0.0269035731 0.0595914844
## X204641_at 1.914330e-02 0.0128756584 -0.0395101460 -0.0761336839
## X204977_at -1.258983e-02 -0.0367477730 0.0205381376 0.0273456275
## X205019_s_at 9.049738e-03 -0.0217283517 0.0074915693 -0.0243916440
## X205086_s_at 5.881147e-04 -0.0123905730 -0.0008468448 -0.0988078911
## X205298_s_at 3.482757e-02 -0.0029452754 0.0142976920 -0.0384521843
## X205306_x_at 1.128381e-01 0.0404549532 -0.0167923868 0.0530700449
## X205392_s_at -1.288759e-03 -0.0493714288 0.0180343115 -0.0377957015
## X205440_s_at -7.984173e-02 0.0396088593 0.0828204184 -0.0931673935
## X205531_s_at -7.678203e-03 0.0343009321 0.0442718830 0.0136148728
## X205554_s_at -2.155262e-03 -0.0011456061 0.0115300240 0.0185191001
## X205740_s_at 1.129943e-03 0.0121743181 -0.0765465950 0.1376965653
## X205819_at -3.001621e-02 -0.0095991356 -0.0429242129 0.0114374408
## X205858_at 1.301532e-01 0.0605373604 0.1347721609 0.0300640479
## X205866_at 2.661179e-03 0.0098589832 0.0124695718 -0.0114166947
## X205890_s_at -2.738723e-02 0.0309475321 -0.0552724469 0.0750670071
## X205911_at 1.854046e-02 -0.0180161346 0.0176491309 -0.0239222051
## X206380_s_at 2.170071e-02 -0.0155040773 -0.0021174267 -0.0501472475
## X206453_s_at 8.021403e-02 -0.0065678295 0.0551412257 -0.0015008234
## X206643_at -3.927748e-02 -0.0464758013 0.0310599833 0.0213712645
## X206680_at -6.276296e-02 0.0258323519 0.0251938866 0.0121299553
## X207076_s_at 8.706681e-02 0.1104170898 0.0343064412 0.0575174552
## X207218_at -3.144723e-03 0.0570903816 0.0799806674 -0.0480632728
## X207262_at -4.622745e-02 -0.0496646933 -0.0290727864 0.0154304048
## X207330_at -5.430567e-02 -0.0349773774 0.0392979648 0.0164793999
## X207609_s_at 4.656078e-02 -0.0122090783 -0.0072083401 0.0231106049
## X207804_s_at 1.803308e-02 -0.0070807523 -0.0566829026 -0.0333262148
## X207828_s_at 2.457416e-03 -0.0138249863 -0.0137129186 0.0282059583
## X207995_s_at -2.417946e-02 0.0726366621 0.0008078319 -0.0164863977
## X208079_s_at 3.935613e-02 -0.0465162274 0.0370083712 0.0221612436
## X208147_s_at 2.146222e-02 -0.0585813443 -0.0102032968 -0.0694430827
## X208816_x_at -4.007308e-02 0.0627050898 -0.0130038876 0.0759107689
## X209189_at 1.023029e-02 0.0770343800 0.0618580581 -0.0172740031
## X209219_at -1.708541e-02 0.0548111024 0.0557174261 0.0037749103
## X209335_at -3.341717e-02 0.0277432902 0.0165501890 0.0370963417
## X209365_s_at 1.697779e-02 0.0023393003 0.0155506011 0.0197127339
## X209447_at -6.752150e-02 0.0535163720 -0.0548814190 -0.1411232607
## X209458_x_at 1.741526e-03 -0.0002585355 -0.0008560055 0.0002279858
## X209821_at 1.176741e-01 -0.0575145879 -0.0780976327 0.0247116564
## X209825_s_at -2.649225e-03 -0.0097461098 -0.1109356758 0.0420766257
## X210095_s_at 2.324818e-02 -0.0494277959 0.0790330276 0.0153951735
## X210481_s_at -7.338330e-02 0.0145919782 0.0078540314 -0.0112866167
## X210909_x_at -1.327814e-01 -0.1386088024 0.0082511865 0.0740064784
## X211023_at -3.034824e-02 0.0452759449 -0.0156638746 0.0102442959
## X211378_x_at -8.129474e-03 0.0223063785 -0.0230224924 0.0133186827
## X211628_x_at 2.340909e-02 0.0409882074 0.0240655950 -0.0191561300
## X211699_x_at -4.516099e-04 0.0018085403 0.0026400479 0.0093912074
## X211745_x_at -3.373909e-03 -0.0036816923 0.0052222406 0.0007211884
## X211765_x_at -8.206686e-03 0.0157696268 -0.0305273920 -0.0008146883
## X211978_x_at 3.773086e-03 0.0219880427 -0.0014396489 0.0176663623
## X212149_at 7.050418e-02 -0.1172998526 0.0431901672 0.0030572861
## X212551_at 9.183095e-03 -0.0294994286 -0.0470287071 -0.0094625265
## X212554_at 5.913600e-03 -0.0101396850 -0.0322949744 -0.0016022792
## X212661_x_at -1.040299e-02 0.0135420123 -0.0281774887 0.0029144262
## X213068_at 3.130900e-02 -0.0319114163 -0.0867371595 0.0244015761
## X213629_x_at -2.737462e-02 -0.0243538202 -0.0433323569 -0.0404779254
## X214414_x_at 1.858133e-02 -0.0010833069 -0.0036483098 -0.0016085865
## X214421_x_at -2.681415e-03 -0.0039580710 -0.0014953475 0.0071915254
## X214710_s_at 3.383025e-02 0.0116835132 0.0519855536 0.0003795003
## X215138_s_at -2.612361e-02 0.0583064768 0.0004273260 -0.0366095034
## X215330_at -2.973054e-02 0.0605835896 0.0438649153 -0.0151016986
## X215768_at -7.370650e-03 0.0016708074 -0.0645106339 0.0839090220
## X216025_x_at -2.442409e-03 -0.0048768423 0.0049230954 0.0016057256
## X216661_x_at -4.005417e-03 0.0028578326 -0.0018244711 -0.0126309548
## X216782_at -4.810886e-02 -0.0169457405 -0.0041990474 0.0051839527
## X217165_x_at -3.449466e-02 -0.0438807396 -0.0329673483 -0.0435164527
## X217319_x_at 5.143778e-05 0.0107297511 -0.0354462848 0.0350183181
## X217414_x_at 1.183018e-02 0.0045033070 0.0004369594 0.0046588980
## X217521_at -4.120334e-02 -0.0400208104 0.0392156758 -0.0017624888
## X218002_s_at 5.197491e-02 0.0246172685 -0.0228590981 -0.0110686241
## X218061_at -8.874630e-02 0.0869694767 0.0405258026 0.0636810524
## X219485_s_at -4.406156e-02 0.0321304850 0.0512802046 -0.0521732231
## X219787_s_at 3.367039e-02 -0.0001858285 -0.0121346120 -0.0486418958
## X220017_x_at -6.543753e-03 0.0070942715 -0.0010086843 0.0064930437
## X220114_s_at 3.501107e-02 -0.0303138685 -0.0376374936 0.0324272030
## X220116_at 2.020979e-02 0.0139557398 0.0032411707 0.0652086822
## X220148_at 2.410488e-02 -0.0144565073 0.0025081325 -0.0519804931
## X220491_at -1.870612e-01 -0.0352361544 -0.0130085717 -0.0112467835
## X220496_at -3.514611e-03 -0.0342018059 0.0003542701 -0.0056227550
## X36829_at -2.724270e-02 -0.0078325174 -0.0367635855 -0.0295144519
## Dim.47 Dim.48 Dim.49 Dim.50
## X200606_at 0.0229117395 2.846458e-04 1.993145e-02 -0.0563678379
## X200734_s_at -0.0426904687 -2.724617e-02 1.845558e-02 0.0266358816
## X200882_s_at -0.0175891111 -2.469084e-02 -3.296789e-02 -0.0113844535
## X200910_at 0.0360423966 -2.956001e-02 -4.797864e-03 0.0288569130
## X200954_at -0.0136727705 -2.705043e-02 6.671989e-03 -0.0289173511
## X201128_s_at 0.0118831339 2.735701e-02 -5.059836e-02 -0.0622691702
## X201184_s_at 0.0004793065 2.350078e-02 -5.705334e-02 0.0268310243
## X201293_x_at 0.0012304271 1.294877e-02 -2.006336e-02 -0.0218917973
## X201398_s_at -0.0905863411 1.083216e-01 4.107707e-02 0.0198238681
## X201441_at 0.0437420107 1.158806e-02 -7.806772e-03 -0.0040844677
## X201453_x_at -0.0421994487 -8.889341e-02 -6.767877e-02 -0.1584437454
## X201516_at -0.0871981992 1.008124e-01 3.498511e-02 -0.0837893178
## X201527_at 0.0011534907 -7.671817e-03 -3.247741e-02 0.1177587995
## X201531_at 0.0507861556 -6.336411e-03 4.579777e-03 0.0173146325
## X201577_at 0.0759151209 1.520329e-02 9.242912e-02 -0.0003620753
## X201584_s_at -0.0002537611 -6.191873e-02 9.635221e-02 0.0324541928
## X201656_at -0.1031553728 6.015234e-02 8.977326e-02 0.0306503079
## X202541_at 0.0343010125 8.607615e-02 -3.475255e-02 0.0248169123
## X202737_s_at -0.0005066166 -5.086057e-02 5.019754e-02 -0.0195913287
## X202861_at -0.0604752237 6.394013e-02 -6.036618e-04 -0.0018520317
## X202940_at 0.0067754093 2.250344e-02 -2.819475e-02 -0.0609642261
## X202963_at 0.0498788412 2.491401e-02 7.739439e-02 -0.0561354430
## X203316_s_at 0.0463572843 -2.979799e-02 4.616313e-03 0.0056668643
## X203554_x_at -0.0143906476 -5.869151e-04 3.053029e-02 0.0058601487
## X203755_at -0.0433875650 4.016857e-02 1.480757e-03 0.0038732309
## X204018_x_at 0.0141923152 -1.074201e-03 -4.548988e-04 0.0095328115
## X204301_at -0.0482442041 5.009579e-02 -2.106417e-05 0.0296912574
## X204428_s_at -0.0054557399 8.895475e-02 -6.275726e-02 0.0123109938
## X204641_at 0.0109953102 4.762150e-02 -1.661666e-02 -0.0065809742
## X204977_at 0.0309566718 -4.538861e-02 -5.608180e-02 0.0052900438
## X205019_s_at -0.0187748552 -1.289037e-02 3.595015e-02 -0.0263154188
## X205086_s_at 0.0226131954 -4.436848e-05 -3.484296e-02 -0.0224691633
## X205298_s_at 0.0489412773 1.895796e-02 -6.313975e-02 -0.0190072320
## X205306_x_at 0.0617694162 5.569089e-02 1.332438e-02 0.0866594636
## X205392_s_at -0.0048250501 1.158657e-01 -2.434688e-02 -0.0252210086
## X205440_s_at -0.0436057689 -1.112302e-02 2.022881e-02 -0.0055374348
## X205531_s_at 0.0854018605 7.315924e-03 4.814862e-02 -0.0810762054
## X205554_s_at -0.0320126387 6.685728e-02 -2.072795e-02 -0.0288626098
## X205740_s_at -0.0045395275 3.481136e-04 5.671281e-02 0.0110094242
## X205819_at -0.0570169710 -1.752882e-02 3.880661e-02 0.1043784399
## X205858_at 0.1303837536 2.259760e-02 -7.070760e-02 0.0550727760
## X205866_at 0.0259345873 2.097167e-02 -2.977281e-02 0.0114029340
## X205890_s_at -0.0763515651 -4.488306e-02 -5.504915e-02 -0.0729120185
## X205911_at -0.0495825408 -2.704452e-02 -9.840413e-03 -0.0097143265
## X206380_s_at -0.0080730675 3.986161e-02 5.683996e-02 0.0671027060
## X206453_s_at -0.1309675178 -2.880610e-02 3.191463e-02 0.0314652924
## X206643_at -0.0379033213 -2.472364e-02 -2.373195e-02 -0.0053419733
## X206680_at -0.1219656968 4.135310e-02 2.177176e-02 -0.0065826994
## X207076_s_at -0.0350777157 -6.332771e-02 8.698661e-02 -0.0391576253
## X207218_at -0.0491932220 -5.472135e-02 -6.737586e-02 0.0123873372
## X207262_at -0.0400146175 7.559214e-03 1.424020e-02 -0.0104649041
## X207330_at 0.0178363361 -5.153017e-04 -3.401529e-02 -0.0139215257
## X207609_s_at 0.0027989126 -4.422134e-02 4.631849e-02 0.0378616608
## X207804_s_at 0.0299407280 -1.778716e-02 2.198316e-02 -0.0230834595
## X207828_s_at 0.0011442783 3.044656e-03 -7.521874e-03 0.0500955298
## X207995_s_at -0.0121793221 -6.241994e-02 -9.932623e-03 -0.0070020782
## X208079_s_at 0.0192688466 -3.897161e-04 -3.946385e-02 0.0016619095
## X208147_s_at 0.0037496993 -5.484516e-02 -4.907693e-02 0.0442464917
## X208816_x_at 0.0495953392 -2.224770e-02 1.136402e-01 -0.0654229743
## X209189_at -0.0137998263 3.888850e-02 -4.305110e-02 0.0632633944
## X209219_at -0.0803133487 -1.105316e-01 -2.592492e-02 0.0401965026
## X209335_at 0.0591091745 2.702513e-02 -3.754166e-02 -0.0061600625
## X209365_s_at 0.0292768229 1.422890e-02 2.574964e-03 0.0062140873
## X209447_at 0.0010402047 -2.423963e-02 8.331657e-02 0.0059691932
## X209458_x_at 0.0169259711 -7.301917e-03 4.603795e-03 0.0002651985
## X209821_at -0.0221528352 -4.021507e-02 -7.543283e-03 -0.0641524602
## X209825_s_at -0.0067327440 -2.269101e-02 -7.656048e-02 0.0991032931
## X210095_s_at 0.0009802432 2.809323e-02 1.148256e-02 -0.0469303515
## X210481_s_at 0.0121845457 -5.691830e-02 1.977587e-02 -0.0379519732
## X210909_x_at 0.0413775935 1.106358e-01 -6.403172e-02 -0.0258946682
## X211023_at 0.0416343365 -4.257965e-02 -1.144582e-03 0.0455697084
## X211378_x_at -0.0022030371 1.446876e-03 -2.701223e-02 -0.0234770330
## X211628_x_at -0.0111606202 1.944647e-02 -1.016048e-01 -0.0112710502
## X211699_x_at 0.0043081214 2.621390e-04 5.236908e-03 0.0062996333
## X211745_x_at -0.0055856439 6.015216e-03 -3.119400e-03 -0.0042856376
## X211765_x_at -0.0002801398 1.004715e-02 -2.640122e-02 -0.0185263391
## X211978_x_at -0.0009528643 2.352200e-02 -2.209460e-02 -0.0165429478
## X212149_at 0.0374865545 -6.226164e-02 -3.496002e-03 0.0293906291
## X212551_at -0.0374801861 5.441728e-02 1.116337e-02 0.0541722952
## X212554_at -0.0342311684 4.526120e-02 3.026069e-03 0.0257189187
## X212661_x_at 0.0002995616 8.620345e-03 -1.589950e-02 -0.0024262750
## X213068_at -0.0531781478 1.745001e-02 -1.953635e-02 0.0219160691
## X213629_x_at 0.0206879094 -5.342099e-02 1.043777e-02 -0.0043587016
## X214414_x_at -0.0081022742 -4.323536e-03 -1.486594e-02 -0.0211894488
## X214421_x_at 0.0249991916 -2.214402e-03 9.770700e-03 -0.0234735793
## X214710_s_at -0.0528324399 1.576384e-02 2.320324e-02 0.0342152932
## X215138_s_at -0.0580564303 -1.224418e-02 -2.465280e-02 -0.0192826674
## X215330_at 0.0100000021 2.256448e-03 -8.417450e-03 0.0177431515
## X215768_at 0.0358066533 -5.724942e-04 3.950675e-02 0.0295912074
## X216025_x_at 0.0265848389 -1.325453e-03 1.008402e-02 -0.0302606339
## X216661_x_at 0.0243055206 -8.042221e-03 1.616291e-02 -0.0166292369
## X216782_at -0.0014299251 -4.925246e-02 -5.660057e-03 0.0284060269
## X217165_x_at 0.0253138730 -4.171121e-02 1.717355e-02 -0.0079513512
## X217319_x_at -0.0267080905 2.953160e-02 -1.775159e-03 0.0033954908
## X217414_x_at 0.0081880159 -6.419300e-03 -1.220467e-03 -0.0041139246
## X217521_at -0.0307114365 -3.240952e-03 -4.085253e-03 0.0147426144
## X218002_s_at 0.0116559554 -1.038435e-02 2.840510e-02 -0.0270362153
## X218061_at 0.1230632663 7.588576e-02 8.712248e-02 -0.0259290990
## X219485_s_at -0.0418294929 -7.469156e-02 -1.361322e-02 0.0491263486
## X219787_s_at -0.0186400601 5.283072e-02 -8.682982e-03 -0.0271102104
## X220017_x_at 0.0196203498 -4.312540e-03 1.054252e-02 -0.0314479297
## X220114_s_at 0.0101521398 -1.946929e-02 2.538701e-02 -0.0032609135
## X220116_at -0.0302786934 -1.358115e-02 -7.319549e-02 -0.0708180078
## X220148_at 0.0331911154 3.970282e-02 4.045868e-03 0.0401773610
## X220491_at 0.0294287690 -3.793657e-02 -1.291930e-01 -0.0086316369
## X220496_at 0.0415939825 -1.845678e-02 2.704457e-02 0.0053325796
## X36829_at -0.0764681914 5.404564e-02 3.859319e-03 -0.0693335871
## Dim.51 Dim.52 Dim.53 Dim.54
## X200606_at -0.0006133404 -0.0365429826 0.0358782269 5.290009e-02
## X200734_s_at -0.0062650718 -0.0109900637 -0.0289022308 -1.193791e-02
## X200882_s_at 0.0429007772 -0.0366112857 0.0452190716 -1.893404e-02
## X200910_at 0.0467808236 0.0091068400 0.0177320273 3.162207e-02
## X200954_at -0.0150758988 0.0513861283 0.0699644516 3.577057e-02
## X201128_s_at -0.1126154184 -0.0204636820 -0.0785285969 -6.091910e-02
## X201184_s_at 0.0300104061 -0.0207073361 0.0038377323 1.691828e-02
## X201293_x_at 0.0007685702 -0.0073578537 -0.0021348739 1.296964e-02
## X201398_s_at -0.0360699545 0.0536561486 -0.0115760826 -8.417068e-02
## X201441_at 0.0056142471 0.0091172998 -0.0095664527 -1.173958e-01
## X201453_x_at 0.0183525016 -0.0657566949 0.0092667921 -3.685935e-02
## X201516_at 0.0011000597 0.0056425457 0.0594823636 6.406158e-02
## X201527_at 0.0382170071 -0.0373435581 0.0825337643 -2.173618e-02
## X201531_at 0.0079578141 -0.0217574645 0.0136753907 4.526689e-02
## X201577_at 0.0625731110 0.0629850555 -0.1078203932 -5.699379e-02
## X201584_s_at -0.0750188136 -0.0129467436 -0.0496834669 5.333412e-02
## X201656_at 0.0423637683 -0.0411960064 0.0160188712 -9.556619e-03
## X202541_at 0.0154194625 -0.0453812809 -0.0512318960 1.778477e-02
## X202737_s_at -0.0255205825 -0.1107930945 -0.0136138006 -3.255194e-02
## X202861_at 0.0195952335 -0.0306461651 0.0127483758 -1.907397e-02
## X202940_at 0.0264630576 0.0097995414 0.0035369290 1.264676e-02
## X202963_at -0.0849616053 0.0571057295 0.0875297352 2.661970e-02
## X203316_s_at 0.0112034338 0.0262323133 0.0303287893 2.896466e-02
## X203554_x_at 0.0085940209 0.0341854131 -0.0055705781 4.769517e-02
## X203755_at 0.0286399117 0.0185872167 0.0291070149 -4.793851e-02
## X204018_x_at -0.0052876299 0.0118394800 0.0057862948 -2.587258e-03
## X204301_at 0.0101515427 0.0558840968 0.0471315409 -8.850264e-04
## X204428_s_at -0.0539398954 -0.0150990278 0.0226180849 -3.328989e-02
## X204641_at -0.0126855847 -0.0656769426 0.0129773271 1.317769e-02
## X204977_at -0.0137659062 0.0390162681 -0.0027534610 -7.404925e-02
## X205019_s_at 0.0088628195 0.0293599127 -0.0372941455 1.872281e-02
## X205086_s_at -0.0128678171 -0.0059281049 0.0147117418 -3.712207e-02
## X205298_s_at -0.0212862891 0.0084483242 -0.0112917754 -3.338848e-02
## X205306_x_at 0.0414053263 -0.0973757112 0.0943985324 2.899744e-02
## X205392_s_at 0.0762611567 -0.0123120134 -0.0146388829 4.748173e-02
## X205440_s_at -0.1449192428 -0.0899382609 0.0606958252 3.840194e-02
## X205531_s_at 0.0566901477 0.0133405981 -0.0182581823 6.229847e-05
## X205554_s_at 0.0589763292 -0.0114033739 0.0154513616 1.309291e-02
## X205740_s_at -0.0176143617 0.0331925043 0.0281414556 4.132817e-02
## X205819_at -0.0076581191 -0.0832929333 -0.0396775247 7.393918e-03
## X205858_at -0.0435662422 -0.0869586399 0.0025234231 -5.821318e-02
## X205866_at 0.0375620496 0.0278046187 -0.0067350822 -3.163534e-02
## X205890_s_at -0.0361286181 0.0476148851 0.0140813571 -8.109335e-03
## X205911_at -0.0696386970 0.0803805522 -0.0304782721 4.085722e-02
## X206380_s_at -0.1011207022 -0.0232526835 0.0007275123 -9.386760e-03
## X206453_s_at -0.0325717830 0.0377121768 0.0195216950 -3.502797e-02
## X206643_at -0.0192719901 -0.0221984097 -0.0006685028 -6.326190e-03
## X206680_at 0.0350557278 -0.0336507897 0.0090611776 -4.450775e-02
## X207076_s_at -0.0063844158 0.0217757149 -0.0205987599 -6.173083e-02
## X207218_at -0.0413562443 0.0095979361 -0.0765669111 4.777442e-02
## X207262_at 0.0583034435 -0.0539893596 -0.1022147125 7.675703e-02
## X207330_at 0.0079578927 -0.0035864816 0.0175933419 -2.441897e-02
## X207609_s_at -0.0405216201 -0.0468772698 0.0424565721 -9.244985e-02
## X207804_s_at 0.0620954493 0.0457570138 -0.0155424704 -6.553707e-03
## X207828_s_at -0.0157322225 0.0012976720 0.0181244712 -1.158985e-03
## X207995_s_at -0.0231888954 0.0073535383 0.0579220328 4.580240e-02
## X208079_s_at 0.0072116855 0.0823513792 -0.0025623567 -2.052131e-02
## X208147_s_at -0.0053691837 0.0498182305 0.0964688991 3.303195e-02
## X208816_x_at 0.0177783062 -0.0540830199 0.0960166135 -5.480190e-02
## X209189_at 0.0009709045 0.1084320773 0.0311163406 -1.543153e-02
## X209219_at 0.0157079446 -0.0018625367 -0.0115944034 -4.953760e-02
## X209335_at -0.0100037414 0.0246855907 -0.0198193636 6.849711e-02
## X209365_s_at -0.0123507626 0.0294436755 -0.0281128942 1.757477e-02
## X209447_at 0.1271869900 -0.0613243355 0.0099030612 -2.155485e-02
## X209458_x_at -0.0141302144 0.0098937960 -0.0029689635 2.149863e-03
## X209821_at 0.0215024685 0.0169313636 0.0176790472 -2.144216e-02
## X209825_s_at 0.0401473159 -0.0040502543 -0.0459241508 2.802785e-02
## X210095_s_at 0.0693153766 0.0413803647 -0.0019631474 -2.332368e-02
## X210481_s_at 0.0283788217 0.0128164416 0.0161526774 -2.837764e-02
## X210909_x_at -0.0595717368 0.0604949972 0.0625976238 -5.038654e-02
## X211023_at -0.0149951454 0.0307890646 0.0539281514 -4.452288e-03
## X211378_x_at -0.0063315127 -0.0116124900 -0.0110263501 5.270674e-03
## X211628_x_at 0.0499398918 0.0108394574 0.0109368736 2.017448e-02
## X211699_x_at -0.0121327203 0.0048314256 0.0030036534 -9.351511e-03
## X211745_x_at 0.0041746037 0.0023063301 0.0066203003 -1.252918e-03
## X211765_x_at -0.0029420954 -0.0078966859 -0.0111218784 2.151719e-02
## X211978_x_at 0.0124742397 -0.0169101031 -0.0042368920 1.989726e-02
## X212149_at 0.0160673250 -0.0359020024 0.0083864131 2.875391e-02
## X212551_at -0.0244889333 0.0127938107 -0.0538794690 -3.671378e-02
## X212554_at -0.0055738179 0.0136199549 -0.0367958099 -5.164276e-02
## X212661_x_at 0.0181311680 -0.0008706913 -0.0181417618 1.716225e-02
## X213068_at 0.0463668621 -0.0067251057 -0.0899446412 -1.671386e-02
## X213629_x_at -0.0408000500 0.0191722705 -0.0397206396 -1.114551e-02
## X214414_x_at 0.0034944433 -0.0189182008 -0.0004105951 5.161379e-03
## X214421_x_at 0.0189994722 -0.0063633625 0.0091867567 -1.316161e-02
## X214710_s_at 0.0153930682 0.0085922637 -0.0005885211 6.247777e-02
## X215138_s_at 0.0007324110 0.0060992904 0.0224325789 5.969726e-03
## X215330_at 0.0051731241 0.0122646622 -0.0459821950 -2.545962e-02
## X215768_at 0.0541499140 0.0232765439 0.0459000120 -2.433839e-02
## X216025_x_at 0.0153885276 -0.0078366090 0.0093422816 -1.030767e-02
## X216661_x_at 0.0058747008 0.0006767143 0.0064634725 -1.474148e-02
## X216782_at 0.0072436521 0.0102779120 0.0361734800 2.117284e-03
## X217165_x_at -0.0362517305 0.0154157308 -0.0352572460 1.262287e-03
## X217319_x_at -0.0174808765 0.0259202150 0.0476220645 5.844008e-02
## X217414_x_at 0.0058818166 0.0007179228 0.0020500214 3.485310e-03
## X217521_at -0.0106813841 -0.0148739410 0.0027973520 -1.134322e-02
## X218002_s_at 0.0115487728 0.0357571879 -0.0050540056 2.586347e-02
## X218061_at -0.0482082542 0.0017504776 -0.0462853263 6.128214e-02
## X219485_s_at 0.0640044160 0.0770769856 0.0276337634 4.966709e-02
## X219787_s_at 0.0219846997 0.0012038032 0.0369245746 -1.594216e-03
## X220017_x_at 0.0116104982 -0.0087530935 0.0048864604 -4.290218e-03
## X220114_s_at 0.0205584658 0.0245497655 -0.0306345203 2.499419e-02
## X220116_at -0.0282138753 -0.0735666764 -0.0466314188 7.132960e-02
## X220148_at -0.0554489023 0.0215486921 -0.0345658717 1.493222e-02
## X220491_at 0.0249976091 -0.0442639166 0.0203038484 -3.066568e-02
## X220496_at 0.0129728582 0.0258597322 -0.0150723897 -6.353240e-02
## X36829_at -0.0041545742 -0.0417312348 0.0143386808 -3.867595e-02
## Dim.55 Dim.56 Dim.57 Dim.58
## X200606_at -0.0090932500 -0.008683512 -0.0339375356 -1.211133e-02
## X200734_s_at -0.0138641847 0.003658022 0.0146596297 -5.335414e-03
## X200882_s_at 0.0665883856 0.026061030 0.0091649083 2.186843e-02
## X200910_at 0.0142129488 0.014112929 -0.0158091102 7.461180e-03
## X200954_at -0.0034280622 0.023258827 0.0345793113 -2.818947e-02
## X201128_s_at 0.0816540542 -0.019182754 -0.0175740549 1.779488e-02
## X201184_s_at -0.0102429086 0.013554975 -0.0416168668 4.777204e-02
## X201293_x_at 0.0108829550 0.008064384 0.0121927252 2.123794e-02
## X201398_s_at -0.0681978666 -0.036805300 0.0108017499 8.622562e-03
## X201441_at -0.0429189910 -0.022207312 0.0037215684 -3.897236e-02
## X201453_x_at -0.0463608526 -0.023711314 -0.0578516921 4.252086e-02
## X201516_at -0.0192504706 0.009126868 0.0153793406 1.598327e-02
## X201527_at 0.0687777379 -0.018340286 -0.0046783493 -6.896089e-02
## X201531_at -0.0144104476 0.003597137 0.0181387910 -1.755861e-02
## X201577_at -0.0134694783 0.016602141 -0.0588802789 -2.239213e-03
## X201584_s_at -0.0401316975 -0.101396010 0.0873883744 1.010545e-02
## X201656_at 0.0104491859 0.035836821 0.0619130303 2.812626e-03
## X202541_at -0.0579333188 -0.020808934 -0.0030363631 4.500609e-02
## X202737_s_at 0.0423595246 -0.019234172 0.0707045506 1.278285e-02
## X202861_at 0.0293761819 -0.001370132 -0.0524280891 3.971951e-02
## X202940_at -0.0321749821 0.001961526 0.0169830252 2.250119e-03
## X202963_at -0.0643843540 0.057913300 -0.0096996287 -1.339878e-01
## X203316_s_at 0.0041600316 -0.017564861 0.0122781668 5.174952e-02
## X203554_x_at 0.0122527595 0.016966248 -0.0109408556 -4.868827e-03
## X203755_at 0.0041170294 0.061513862 -0.0336889634 -5.259589e-02
## X204018_x_at -0.0081472318 -0.008850005 -0.0072118840 -1.139189e-02
## X204301_at 0.0633496104 0.011347032 -0.0124422845 3.326758e-02
## X204428_s_at 0.0365017165 -0.004850373 0.0013628225 -3.515313e-02
## X204641_at 0.0630864475 -0.016263346 0.0084601342 1.713635e-02
## X204977_at 0.0187208286 -0.002526637 0.0312110774 -1.304392e-02
## X205019_s_at -0.0086178377 -0.004901054 -0.0409822099 -1.426284e-04
## X205086_s_at -0.0002948462 0.001291958 0.0320386113 -4.058538e-02
## X205298_s_at -0.0066591545 -0.054830693 0.0271644049 4.567546e-02
## X205306_x_at -0.0640667525 -0.008699539 0.0469968285 6.055144e-02
## X205392_s_at 0.0075461142 -0.086199144 0.0195199681 2.218734e-02
## X205440_s_at 0.0248720564 -0.048822380 -0.0347185016 -3.099554e-02
## X205531_s_at 0.0566098550 -0.086350626 -0.0157946261 -1.226665e-02
## X205554_s_at 0.0175267471 0.006028327 -0.0467709280 -3.590153e-02
## X205740_s_at 0.0113300377 0.005975532 -0.0436139351 -1.316404e-03
## X205819_at 0.0202816231 -0.023627935 0.0260630755 6.143236e-02
## X205858_at -0.0090273557 0.015180920 0.0259347957 -7.526101e-02
## X205866_at -0.0020279297 -0.003403746 -0.0151964747 -1.819501e-02
## X205890_s_at 0.0539648465 0.015679719 0.0381607102 -3.145333e-02
## X205911_at -0.0047459254 0.013792711 -0.0366656553 1.483461e-02
## X206380_s_at 0.0161346777 -0.028472065 -0.0857568881 1.597479e-02
## X206453_s_at -0.0211412677 -0.056892771 0.0141064255 2.445993e-02
## X206643_at 0.0227059489 0.048732736 0.0233896004 4.503359e-02
## X206680_at -0.0398409429 0.035533674 0.0192755270 -6.217484e-02
## X207076_s_at 0.0596982053 -0.045468551 -0.0105329364 -2.864192e-02
## X207218_at 0.0608717596 0.020538154 -0.0727818081 -4.751354e-02
## X207262_at 0.0191296163 -0.069784252 -0.0724091623 -9.180883e-02
## X207330_at -0.0057941277 0.016917720 0.0075009455 -2.006081e-02
## X207609_s_at 0.0384860892 0.062690067 -0.0412528970 -3.586781e-02
## X207804_s_at -0.0012818071 -0.022631352 0.0643153561 -1.836388e-02
## X207828_s_at 0.0200274393 0.021043001 -0.0293046194 9.310364e-03
## X207995_s_at -0.0112339960 0.074706068 -0.0434102124 1.785512e-03
## X208079_s_at 0.0228087701 -0.032690351 0.0082146925 5.640246e-03
## X208147_s_at -0.0586163292 -0.049964570 0.0167796632 2.644504e-02
## X208816_x_at -0.0076223132 -0.072117644 -0.0927593692 1.447957e-02
## X209189_at 0.0400944280 0.010205013 0.0748072904 -1.930826e-02
## X209219_at -0.1380266464 0.007459837 -0.0061351456 3.848362e-02
## X209335_at 0.0323849354 0.003024110 0.0105966375 1.008145e-02
## X209365_s_at 0.0009221246 0.010992708 -0.0091630185 1.140906e-02
## X209447_at 0.0427327220 0.065007223 0.0225765459 -4.868951e-02
## X209458_x_at 0.0036478280 -0.003928423 -0.0047242712 2.046414e-05
## X209821_at -0.0163752148 -0.007670135 -0.0057611428 8.110275e-03
## X209825_s_at -0.1040421254 -0.071757701 -0.0847764151 -1.023003e-01
## X210095_s_at -0.0070679973 -0.074065683 0.0016250159 -4.484437e-02
## X210481_s_at -0.0015397214 -0.011348450 0.0658236234 3.118954e-02
## X210909_x_at -0.0093730196 0.006296272 -0.0304697903 4.046058e-02
## X211023_at 0.0014454287 -0.041969237 0.0267306712 -2.734125e-02
## X211378_x_at -0.0005215958 0.005288843 0.0204098545 1.999042e-02
## X211628_x_at 0.0357471326 0.004605756 -0.0058060457 1.168197e-03
## X211699_x_at -0.0037895620 0.022813361 -0.0104992933 8.511446e-03
## X211745_x_at -0.0063548018 -0.001633678 0.0004647664 3.847419e-03
## X211765_x_at 0.0144235007 0.013158813 0.0059352304 1.588864e-02
## X211978_x_at 0.0225927336 0.001724058 0.0064977361 3.306924e-02
## X212149_at 0.0426427902 0.061632665 -0.0408119691 2.359066e-02
## X212551_at 0.0776510266 -0.051799081 0.0439742178 -3.475204e-02
## X212554_at 0.0220580450 -0.021475715 -0.0025235884 -1.380528e-02
## X212661_x_at 0.0048501284 -0.001416940 0.0093618573 1.428134e-02
## X213068_at -0.0530896080 0.123141190 0.0256178172 1.171444e-02
## X213629_x_at -0.0152605642 0.013957659 0.0304286106 6.872588e-03
## X214414_x_at 0.0124363840 -0.003631015 0.0030889748 2.736202e-03
## X214421_x_at 0.0003417166 0.007602778 0.0098423421 -6.767836e-03
## X214710_s_at 0.0254884818 0.003017211 -0.0329887099 1.197202e-02
## X215138_s_at 0.0240749426 -0.024919637 0.0105553010 3.294973e-03
## X215330_at -0.0028853574 -0.023515987 -0.0053381106 4.659088e-03
## X215768_at 0.0200319638 -0.032238285 0.0009672922 2.027834e-03
## X216025_x_at -0.0046069621 0.012234380 0.0162154690 -8.334773e-03
## X216661_x_at -0.0018104351 0.025642150 0.0091169690 -3.890245e-03
## X216782_at 0.0490609505 -0.069431117 -0.0011873047 3.488657e-02
## X217165_x_at -0.0265887913 0.004772723 0.0157975299 1.945201e-02
## X217319_x_at -0.0506124864 -0.060410109 0.0149802738 -3.592145e-02
## X217414_x_at 0.0035030449 0.003685394 -0.0078776178 -1.088596e-03
## X217521_at -0.0170418722 0.030550979 0.0060633887 1.492248e-02
## X218002_s_at 0.0341898712 0.010210807 -0.0023223152 6.887191e-02
## X218061_at 0.0025577316 0.072801705 0.0158419201 1.758509e-03
## X219485_s_at 0.0884772353 -0.007712390 -0.0069792931 -6.724470e-03
## X219787_s_at -0.0172751477 -0.013771997 0.0245388635 1.535142e-03
## X220017_x_at -0.0062021541 0.013347942 0.0137724859 1.707051e-03
## X220114_s_at -0.0281143410 0.019127619 -0.0142830560 2.016023e-02
## X220116_at -0.0048816239 0.001249045 0.1326506546 -9.161106e-02
## X220148_at -0.0178771644 0.031966805 -0.0281555915 5.806838e-02
## X220491_at -0.0179614399 -0.017126554 -0.0517117443 1.613542e-02
## X220496_at 0.0276373247 0.007173385 0.0259814158 4.586449e-02
## X36829_at -0.0105038416 0.001880101 -0.0287991697 3.159842e-02
## Dim.59 Dim.60 Dim.61 Dim.62
## X200606_at 0.0415948949 1.210444e-02 3.451415e-02 1.656600e-02
## X200734_s_at 0.0236510338 6.226650e-03 2.900565e-02 -2.360464e-02
## X200882_s_at 0.0126739784 -3.064535e-02 4.771312e-02 5.261313e-02
## X200910_at 0.0266215027 1.356615e-02 1.361912e-02 -1.185680e-02
## X200954_at 0.0095572306 -2.739394e-02 -1.465964e-02 3.643568e-03
## X201128_s_at -0.0364576445 -8.432203e-03 -4.393042e-02 1.660018e-02
## X201184_s_at -0.0190322956 4.081267e-03 4.336782e-02 3.777881e-03
## X201293_x_at -0.0094201648 1.166372e-02 -1.465149e-03 -1.046059e-02
## X201398_s_at 0.0185616611 2.535812e-02 -4.982790e-04 1.350663e-03
## X201441_at -0.0209199148 4.311314e-03 -5.659723e-02 2.163008e-02
## X201453_x_at 0.0779334510 2.138774e-02 -3.802178e-02 -1.349947e-02
## X201516_at 0.0407917632 4.871950e-02 -1.633766e-02 5.446612e-02
## X201527_at 0.0012200121 2.156349e-02 -1.110381e-02 -1.045354e-02
## X201531_at 0.0027898139 1.443027e-02 3.852330e-02 4.326528e-02
## X201577_at -0.0014338595 1.614440e-02 -2.248406e-02 -4.381233e-02
## X201584_s_at 0.0664828024 5.118183e-02 1.474547e-02 1.325367e-02
## X201656_at -0.0256486312 2.186727e-02 -6.154806e-02 2.223852e-02
## X202541_at 0.0092228019 -3.142967e-02 -4.067499e-02 3.643527e-03
## X202737_s_at -0.0616719331 -2.519795e-02 7.371896e-02 -6.831039e-02
## X202861_at 0.0547341453 -6.887417e-03 -3.513195e-02 -4.508417e-02
## X202940_at -0.0104642499 -5.993096e-03 -1.090178e-02 3.078026e-02
## X202963_at -0.0178748619 3.632458e-02 1.590763e-02 -4.062093e-02
## X203316_s_at -0.0384658659 1.784139e-02 -6.698980e-02 -8.264163e-02
## X203554_x_at 0.0073721195 -2.184990e-02 1.595263e-02 -4.215977e-02
## X203755_at 0.0743440052 1.033515e-02 -1.193322e-02 1.209267e-02
## X204018_x_at 0.0064451859 -3.347871e-03 2.193036e-03 2.987540e-03
## X204301_at 0.0258406137 5.932149e-03 3.308320e-02 5.880982e-03
## X204428_s_at 0.0121456612 4.272265e-02 -3.737292e-02 4.763950e-02
## X204641_at -0.0402699881 5.099581e-02 2.932394e-02 2.778111e-02
## X204977_at 0.0243212611 6.490048e-04 6.826094e-04 8.742008e-03
## X205019_s_at -0.0300354067 -1.503352e-02 5.302433e-03 -1.333685e-02
## X205086_s_at 0.0049802231 -3.465730e-03 7.321669e-03 -1.719607e-02
## X205298_s_at 0.0024691610 -1.804189e-02 5.692228e-04 -1.996705e-02
## X205306_x_at -0.0402995716 -7.837552e-03 -1.057852e-02 -3.967913e-02
## X205392_s_at -0.0587723476 -4.067144e-02 3.172878e-02 4.009102e-02
## X205440_s_at 0.0776921502 -6.936135e-02 2.175454e-02 -4.912638e-03
## X205531_s_at -0.0159534053 8.792630e-02 6.890668e-03 2.428902e-02
## X205554_s_at -0.0337785075 -5.714083e-02 -1.152080e-02 -7.571843e-02
## X205740_s_at 0.0065201497 -3.402807e-03 3.983490e-02 -3.211658e-02
## X205819_at 0.0496479157 2.092080e-02 -2.716949e-02 4.963891e-02
## X205858_at 0.0205214346 -4.382360e-03 4.551837e-03 -2.950584e-02
## X205866_at 0.0032690718 -2.543944e-02 -4.618253e-02 -1.561993e-02
## X205890_s_at -0.0010765640 -3.201094e-02 -5.495841e-02 -1.491543e-02
## X205911_at -0.0968519364 2.841907e-03 -9.794701e-05 1.772832e-02
## X206380_s_at -0.0822755632 1.313804e-02 -3.142733e-02 4.766409e-02
## X206453_s_at -0.0367179997 3.284340e-02 -7.473728e-02 -2.826439e-02
## X206643_at 0.0089105437 -2.909174e-02 -1.792113e-02 7.822234e-03
## X206680_at 0.0011336286 2.169255e-02 1.343488e-01 -2.903613e-02
## X207076_s_at 0.0326836015 2.520397e-02 -9.911217e-03 3.227556e-02
## X207218_at 0.0131281346 -3.863839e-02 5.580645e-02 6.899370e-02
## X207262_at 0.0100436696 2.462117e-02 -1.904129e-02 -5.491668e-02
## X207330_at -0.0105983153 -2.830463e-02 -2.106989e-02 -1.960193e-02
## X207609_s_at -0.0226529887 1.200567e-02 -1.994133e-02 1.181514e-02
## X207804_s_at 0.1053336061 -9.744377e-02 -1.118637e-02 -1.401680e-02
## X207828_s_at 0.0107675299 5.516547e-05 -2.480364e-02 -5.987217e-02
## X207995_s_at -0.0293987253 4.395496e-02 -4.730995e-02 -7.823480e-03
## X208079_s_at -0.0009570057 -4.646145e-02 2.711646e-02 8.194412e-02
## X208147_s_at 0.0589092064 4.135205e-02 -2.232089e-02 5.637163e-02
## X208816_x_at -0.0576347334 -6.280901e-02 8.585826e-03 6.938121e-02
## X209189_at -0.0370871239 1.083380e-03 2.624759e-02 -2.991764e-02
## X209219_at -0.0101451582 -4.802286e-02 3.728050e-02 2.540211e-02
## X209335_at 0.0517002466 -2.449000e-02 -5.180552e-02 -1.015181e-02
## X209365_s_at 0.0341234181 3.233332e-02 -1.632059e-03 -1.928961e-02
## X209447_at 0.0660057113 -1.079807e-02 -5.454567e-02 6.705626e-02
## X209458_x_at -0.0040845743 -7.596470e-03 -7.418704e-03 -1.545853e-03
## X209821_at -0.0087262181 7.796503e-02 5.245186e-03 -5.933717e-03
## X209825_s_at -0.0029764773 -4.111160e-03 -4.490215e-02 4.472663e-02
## X210095_s_at -0.0097676979 -1.704850e-03 5.506565e-02 4.258517e-03
## X210481_s_at -0.0352903796 8.343247e-02 1.492489e-02 -7.610715e-03
## X210909_x_at 0.0506554146 -1.749985e-02 4.791338e-02 4.675979e-02
## X211023_at 0.0029742792 1.293424e-02 2.574205e-02 3.170069e-03
## X211378_x_at -0.0064739143 7.309778e-04 2.836921e-03 -7.728128e-03
## X211628_x_at 0.0318385222 6.179939e-02 -1.868456e-02 -3.642355e-02
## X211699_x_at 0.0153085755 -2.967312e-03 -2.727940e-02 -1.125044e-02
## X211745_x_at 0.0018175810 2.426993e-03 -8.822004e-03 6.657396e-03
## X211765_x_at -0.0063467616 5.382176e-03 -6.432049e-04 -3.261690e-03
## X211978_x_at -0.0014874511 -4.744913e-03 6.181425e-03 -1.710570e-03
## X212149_at -0.0043485229 2.787368e-03 -2.458544e-02 1.946701e-02
## X212551_at 0.0053981566 -1.164179e-02 1.687346e-02 -2.580120e-02
## X212554_at 0.0254451479 4.110633e-03 1.875088e-02 3.104835e-03
## X212661_x_at -0.0025478926 2.429646e-03 4.893600e-03 5.470125e-04
## X213068_at -0.0322152484 3.356160e-02 2.645351e-03 6.857668e-02
## X213629_x_at -0.0190180691 -4.507636e-02 -1.417100e-02 -2.394095e-03
## X214414_x_at 0.0007841307 -3.538882e-03 1.180091e-02 2.887750e-03
## X214421_x_at -0.0216404043 -1.454805e-02 4.341228e-03 -6.336513e-04
## X214710_s_at 0.0129607489 -4.538214e-02 3.516927e-04 -1.782591e-02
## X215138_s_at 0.0146248005 3.368951e-02 -2.627787e-02 -2.899012e-04
## X215330_at -0.0103008818 2.434690e-02 1.353747e-03 8.044782e-03
## X215768_at -0.0085601030 -2.149443e-03 4.760987e-03 1.672874e-02
## X216025_x_at -0.0212682514 -1.613122e-02 7.542226e-03 2.995987e-03
## X216661_x_at -0.0163379247 -1.289002e-02 5.532211e-03 -5.761139e-03
## X216782_at 0.0261790843 2.040928e-02 -1.006593e-02 -7.089381e-03
## X217165_x_at -0.0198551336 -3.459217e-02 9.370964e-03 1.610753e-03
## X217319_x_at -0.0168094523 -4.696646e-02 -6.160837e-02 -1.731918e-02
## X217414_x_at 0.0015028940 1.053277e-02 -2.583592e-03 2.052978e-03
## X217521_at -0.0246368001 -6.037083e-02 -5.770580e-03 -1.555711e-03
## X218002_s_at -0.0026032784 -5.045057e-02 1.396804e-02 -1.687385e-02
## X218061_at 0.0047639294 2.977009e-02 -3.930007e-02 6.050247e-02
## X219485_s_at -0.0755107542 1.624233e-02 -2.885745e-03 2.735252e-02
## X219787_s_at -0.0546970832 -3.785986e-02 -3.153983e-02 5.553158e-02
## X220017_x_at -0.0134801583 -1.346033e-02 5.897304e-03 3.580697e-05
## X220114_s_at 0.0210438332 -1.327974e-02 3.630918e-02 5.934509e-03
## X220116_at -0.0406274863 1.675747e-02 -2.806720e-02 3.064999e-02
## X220148_at 0.0612822908 7.888323e-02 6.270776e-02 -2.770423e-02
## X220491_at -0.0383348221 7.746927e-02 3.313212e-02 -1.456030e-02
## X220496_at 0.0405256447 -1.790748e-02 -3.850298e-02 -4.097892e-03
## X36829_at -0.0079035214 8.849512e-03 -1.949449e-02 -5.365366e-02
## Dim.63 Dim.64 Dim.65 Dim.66
## X200606_at -2.344426e-02 -2.826874e-03 -4.302203e-03 -1.385636e-03
## X200734_s_at -4.849032e-02 2.122968e-02 -2.183293e-02 9.750838e-03
## X200882_s_at 5.769510e-02 -5.672986e-02 -3.491872e-02 -4.116259e-03
## X200910_at -6.952079e-03 -3.802070e-02 -2.087199e-02 3.500969e-02
## X200954_at 5.949296e-03 -5.379841e-03 -1.206005e-02 -2.074081e-02
## X201128_s_at -5.014970e-03 -1.932126e-02 4.488651e-03 5.090095e-02
## X201184_s_at -2.267419e-02 -3.276535e-02 5.180427e-02 7.984517e-04
## X201293_x_at 4.950863e-03 8.800012e-03 2.414663e-03 7.182472e-03
## X201398_s_at -2.784506e-02 1.818307e-02 3.127662e-02 -2.864976e-02
## X201441_at 1.809991e-02 3.281778e-03 1.750292e-02 1.228587e-02
## X201453_x_at -4.052952e-02 2.394040e-02 3.704144e-03 2.386862e-02
## X201516_at -3.257200e-02 5.892944e-03 -7.935095e-04 -8.644654e-03
## X201527_at 5.646958e-02 -1.311207e-02 -1.064580e-02 3.247917e-03
## X201531_at -2.810783e-02 -5.618136e-03 3.960874e-02 -4.858609e-03
## X201577_at 1.212469e-02 2.332656e-03 -2.938178e-03 1.754430e-02
## X201584_s_at -2.727253e-02 6.117031e-03 -1.145423e-02 -3.578359e-03
## X201656_at -4.092823e-02 4.007915e-02 2.277691e-02 3.485550e-02
## X202541_at 1.871872e-02 -2.190151e-02 -1.640583e-02 -2.331890e-02
## X202737_s_at -2.140695e-02 9.996023e-03 7.758108e-03 -2.819431e-02
## X202861_at 1.560743e-02 3.240297e-02 -3.078254e-03 2.874178e-03
## X202940_at 3.358571e-03 -2.799207e-03 -7.451096e-03 -1.315348e-02
## X202963_at 1.872113e-03 -1.096496e-02 7.412968e-02 -5.655457e-02
## X203316_s_at -2.999791e-02 1.476234e-05 -4.201427e-02 3.590895e-02
## X203554_x_at -1.786123e-02 -1.957699e-02 -2.320713e-02 -1.346475e-02
## X203755_at 3.486866e-02 -1.028898e-02 1.211693e-02 2.845965e-02
## X204018_x_at 5.059429e-03 4.040669e-03 -2.059165e-02 -5.156548e-04
## X204301_at -2.992195e-02 1.821784e-02 8.837677e-03 -9.828944e-03
## X204428_s_at 4.823832e-02 2.067500e-02 1.187993e-02 2.906149e-02
## X204641_at 2.902868e-02 7.527774e-02 1.954435e-02 3.401542e-03
## X204977_at 3.249403e-02 2.720845e-02 -2.072686e-02 -1.148240e-02
## X205019_s_at 1.584196e-02 1.874991e-02 -2.024001e-02 1.418689e-02
## X205086_s_at -1.678642e-02 -8.254988e-03 2.356823e-03 -3.205899e-03
## X205298_s_at -3.104510e-02 8.422207e-03 -1.058256e-02 6.016110e-04
## X205306_x_at -2.621089e-02 2.213551e-02 3.238567e-02 6.968633e-03
## X205392_s_at 1.295494e-02 5.748660e-02 1.201388e-02 -2.950087e-02
## X205440_s_at 1.627933e-02 1.238125e-02 2.210464e-02 2.640760e-03
## X205531_s_at 2.240249e-02 6.436692e-02 3.406343e-03 2.815036e-02
## X205554_s_at -1.329364e-02 9.386600e-03 -3.185170e-02 -2.357192e-02
## X205740_s_at -3.476602e-02 3.054386e-02 -1.907412e-02 -2.568719e-02
## X205819_at 6.216633e-02 -4.726033e-02 7.073984e-02 -1.390595e-02
## X205858_at -1.759090e-02 -8.913487e-03 -5.978865e-03 -9.387251e-03
## X205866_at 1.508776e-02 2.968498e-02 -3.324188e-02 -6.328457e-02
## X205890_s_at 5.844892e-02 3.908350e-02 -1.378927e-02 -1.801805e-02
## X205911_at 6.715381e-02 5.511182e-02 8.618813e-02 6.592207e-02
## X206380_s_at -8.044999e-02 -1.225214e-02 -1.014266e-01 3.586087e-02
## X206453_s_at 2.168648e-02 -5.084952e-02 2.384267e-02 -1.124735e-01
## X206643_at 2.338926e-03 2.496930e-02 -1.966466e-02 -3.170091e-03
## X206680_at 2.871132e-02 5.127026e-02 -6.942162e-02 6.016742e-02
## X207076_s_at -4.841340e-02 -1.214022e-02 2.092860e-03 2.306110e-02
## X207218_at -4.973932e-02 -2.264203e-02 -1.502332e-02 -3.988309e-02
## X207262_at 3.252798e-02 -7.994133e-02 3.010382e-02 -4.594758e-02
## X207330_at 9.005458e-03 5.440006e-03 1.119728e-02 -4.082624e-03
## X207609_s_at -4.452183e-02 2.754078e-02 4.328256e-02 9.639930e-03
## X207804_s_at -1.470041e-02 1.175017e-02 7.818866e-02 5.316123e-02
## X207828_s_at -1.905524e-02 -7.989397e-03 -2.633773e-02 4.112770e-03
## X207995_s_at -3.801269e-02 -6.291826e-04 -2.547237e-02 -8.807843e-03
## X208079_s_at -6.570547e-02 -5.951175e-02 2.933229e-02 -2.674494e-02
## X208147_s_at 1.082484e-02 7.849095e-02 -6.521239e-02 1.070624e-02
## X208816_x_at 6.353176e-02 -3.464607e-02 -4.970921e-03 4.662186e-06
## X209189_at 4.021304e-02 -4.379951e-02 -1.970427e-02 2.306650e-02
## X209219_at 5.510444e-02 -3.141855e-03 3.537912e-03 5.374062e-04
## X209335_at -1.252773e-02 2.701396e-02 -3.521927e-02 1.226922e-03
## X209365_s_at 7.806160e-03 1.546211e-02 1.413429e-02 -5.587580e-03
## X209447_at -2.772613e-02 -1.405871e-02 -2.793891e-02 4.963315e-03
## X209458_x_at -5.092041e-03 -3.512474e-03 -8.133153e-03 -6.737416e-03
## X209821_at 2.820329e-02 -2.445630e-02 -2.378965e-02 -8.706197e-05
## X209825_s_at 1.264714e-03 7.274428e-02 -2.750113e-02 -2.821224e-02
## X210095_s_at -1.989816e-03 -2.731086e-02 -5.124744e-02 1.369112e-02
## X210481_s_at -3.715273e-03 -7.697548e-02 -4.138480e-02 -2.240914e-02
## X210909_x_at -3.223853e-02 -4.253547e-02 -7.980241e-04 -2.602590e-02
## X211023_at -1.061027e-02 2.646374e-03 2.591812e-03 -3.004456e-02
## X211378_x_at 8.723269e-03 5.161818e-03 -2.586005e-04 5.376654e-03
## X211628_x_at -3.932167e-02 -1.995807e-02 4.178815e-02 1.031860e-03
## X211699_x_at -3.860051e-04 -4.452084e-03 -3.202321e-03 -3.159355e-03
## X211745_x_at 4.221070e-03 7.049230e-03 1.528898e-05 -6.646793e-03
## X211765_x_at 7.287268e-03 2.976178e-03 -2.339842e-03 6.317199e-03
## X211978_x_at -7.813700e-04 4.918485e-04 -1.466057e-02 1.546396e-02
## X212149_at 4.843560e-02 -1.409350e-02 -2.654572e-02 2.809501e-04
## X212551_at -4.692240e-02 2.574958e-03 -1.506747e-02 -3.781575e-03
## X212554_at -2.999669e-03 2.854302e-03 -7.272781e-03 8.411086e-03
## X212661_x_at 4.936815e-03 -2.064911e-03 -4.739127e-03 1.244247e-02
## X213068_at -6.781028e-02 -2.761136e-02 -8.041804e-03 -9.473238e-03
## X213629_x_at -1.154002e-02 1.490217e-02 -2.597476e-02 1.132081e-02
## X214414_x_at 6.580676e-03 8.604793e-03 6.117552e-03 8.167741e-03
## X214421_x_at -8.773432e-04 7.142023e-03 5.038654e-03 -8.705586e-03
## X214710_s_at 1.044695e-03 6.073525e-03 1.070868e-02 -9.611525e-03
## X215138_s_at -2.127113e-02 5.644032e-03 -1.175689e-02 -1.849621e-02
## X215330_at 1.582836e-02 1.515884e-02 7.532573e-03 4.583275e-03
## X215768_at -1.329395e-02 3.463838e-03 -7.138891e-03 -6.723787e-03
## X216025_x_at -7.342656e-03 1.172011e-02 8.732875e-03 -1.264987e-02
## X216661_x_at -9.162787e-04 -1.306942e-03 1.157542e-02 -1.031149e-02
## X216782_at -8.494271e-03 -2.584924e-02 -4.879199e-03 -2.491538e-02
## X217165_x_at -1.167906e-02 1.345499e-03 -3.192742e-02 1.613457e-03
## X217319_x_at -1.839938e-02 -1.109378e-01 1.492630e-02 1.586062e-01
## X217414_x_at 8.330706e-03 -6.268672e-03 -6.304011e-03 -8.782480e-04
## X217521_at -3.893612e-03 2.084347e-02 1.181098e-03 2.437670e-03
## X218002_s_at 5.336678e-03 2.545449e-02 3.881950e-03 -6.090639e-02
## X218061_at 3.470663e-02 8.421122e-04 -6.424230e-03 -3.380030e-02
## X219485_s_at -5.492194e-03 2.872523e-02 5.334263e-02 1.979101e-02
## X219787_s_at 1.350942e-02 -6.113338e-02 -2.384318e-02 -2.329098e-02
## X220017_x_at -3.471853e-03 1.434951e-02 3.834887e-03 -1.252052e-02
## X220114_s_at 2.088443e-05 -5.267348e-03 4.951498e-02 3.660181e-02
## X220116_at 2.161604e-02 -1.572539e-02 -2.323693e-02 -8.206623e-03
## X220148_at 1.086845e-01 -4.801544e-02 -3.297713e-02 2.244482e-02
## X220491_at -6.673591e-02 -1.242516e-02 7.742268e-02 5.403094e-04
## X220496_at 1.606254e-02 2.003875e-02 3.174139e-02 -2.871528e-02
## X36829_at 1.914889e-02 -3.323088e-02 -1.262492e-02 -2.168083e-02
## Dim.67 Dim.68 Dim.69 Dim.70
## X200606_at -1.969360e-02 3.419451e-02 0.0053980685 0.0080098717
## X200734_s_at 1.665598e-02 1.090721e-02 -0.0007764336 0.0090993891
## X200882_s_at -6.015408e-03 3.063960e-02 -0.0129762749 -0.0187596274
## X200910_at 1.729695e-02 9.061664e-03 -0.0290230865 0.0184734884
## X200954_at 8.450247e-04 1.655632e-02 -0.0177323350 -0.0156036933
## X201128_s_at -2.019835e-02 5.702239e-02 0.0127426469 -0.0005299315
## X201184_s_at -2.893417e-02 -4.085151e-02 -0.0053784176 -0.0218884792
## X201293_x_at -1.151132e-02 -5.675009e-03 0.0114686617 -0.0012134102
## X201398_s_at -3.395481e-03 -4.560211e-05 0.0034538086 0.0324233696
## X201441_at -4.043820e-02 -4.688440e-02 0.0044931150 0.0074598657
## X201453_x_at -7.242725e-04 1.553953e-02 -0.0301314089 -0.0019862087
## X201516_at 2.576212e-02 -3.962940e-03 0.0075903463 0.0083104886
## X201527_at 1.135075e-02 1.476661e-02 -0.0115684079 0.0447084705
## X201531_at -7.247234e-03 1.533612e-02 -0.0063234018 0.0113938038
## X201577_at -1.135634e-02 5.965078e-02 -0.0423243259 -0.0174242158
## X201584_s_at -1.244305e-02 -3.564713e-02 0.0623598948 -0.0730239887
## X201656_at 7.953973e-03 1.629884e-02 -0.0038564553 0.0091319446
## X202541_at -1.450007e-02 -2.293291e-02 -0.0012743069 -0.0064125343
## X202737_s_at -2.428225e-02 2.385602e-02 0.0074307923 -0.0279781586
## X202861_at -2.875907e-02 -4.097916e-02 0.0017725425 0.0097768780
## X202940_at 7.098378e-03 -1.065155e-02 0.0205846851 0.0086480545
## X202963_at 1.263794e-02 1.237652e-02 0.0095564057 0.0268973966
## X203316_s_at 3.664907e-02 -1.795489e-02 0.0812645699 0.0172089631
## X203554_x_at -8.688761e-03 -8.948702e-03 -0.0005847274 0.0442576088
## X203755_at -1.811558e-02 4.365718e-02 0.0354628395 -0.0245174681
## X204018_x_at -5.434723e-03 -1.114322e-02 0.0037169358 -0.0012973328
## X204301_at 9.844868e-03 1.111684e-02 0.0033309283 -0.0117339049
## X204428_s_at -1.541494e-02 -1.889624e-02 -0.0013761630 -0.0682471780
## X204641_at 5.916219e-02 -2.825022e-02 -0.0244634101 0.0631543631
## X204977_at 5.108697e-03 -4.687134e-02 -0.0097275724 0.0395827216
## X205019_s_at 2.071809e-02 -1.955357e-03 -0.0476080911 0.0006065087
## X205086_s_at -4.011406e-02 1.804574e-02 0.0058313963 -0.0019075721
## X205298_s_at -6.897129e-03 -4.881113e-03 0.0084146710 -0.0051065928
## X205306_x_at -5.238574e-02 1.809623e-02 -0.0123021325 0.0250024588
## X205392_s_at 1.289630e-02 1.553275e-02 0.0502645643 0.0067749322
## X205440_s_at 1.260693e-02 1.167955e-02 -0.0408767997 -0.0240743737
## X205531_s_at 5.455162e-02 3.834644e-02 -0.0176280945 0.0198557121
## X205554_s_at -7.881798e-03 1.762736e-02 0.0501982741 -0.0350704726
## X205740_s_at 5.195358e-02 4.883667e-02 -0.0044966302 -0.0064993408
## X205819_at -2.601913e-02 4.663726e-02 0.0234146960 0.0665473509
## X205858_at 3.939696e-02 -8.660931e-03 -0.0219247026 -0.0035030999
## X205866_at -3.001527e-02 1.837576e-02 0.0501265539 -0.0299931586
## X205890_s_at 3.425696e-02 2.913601e-03 -0.0017722826 0.0224886879
## X205911_at -7.530931e-02 3.620507e-02 0.0141280021 0.0490146192
## X206380_s_at 5.642368e-02 9.207082e-03 -0.0053231956 0.0055401334
## X206453_s_at 2.145841e-02 1.035546e-02 -0.0579580830 -0.0266829962
## X206643_at 4.027982e-03 -1.525744e-02 -0.0050372772 -0.0350260842
## X206680_at -5.656554e-02 -1.567629e-02 -0.0369805751 -0.0339265929
## X207076_s_at -4.210908e-03 -2.894810e-02 0.0539811589 0.0416351201
## X207218_at 1.987274e-02 -2.377395e-02 0.0108984924 0.0544465403
## X207262_at -3.025336e-02 -3.246668e-02 0.0514053106 0.0097976753
## X207330_at 1.342221e-02 2.054982e-02 0.0077270454 0.0186363334
## X207609_s_at -2.825779e-02 -6.265693e-02 0.0322266639 -0.0138809747
## X207804_s_at 6.630629e-02 -5.288766e-02 -0.0296748979 -0.0031665786
## X207828_s_at -3.414116e-02 -4.766479e-02 0.0296075741 0.0471113487
## X207995_s_at -3.800622e-02 3.279014e-02 0.0287126103 -0.0286705081
## X208079_s_at -5.389988e-02 8.179208e-02 -0.0151572369 -0.0341283245
## X208147_s_at -2.533701e-02 -4.149797e-03 0.0321467724 0.0021960266
## X208816_x_at -1.838070e-02 -3.294022e-02 0.0197324954 -0.0339727308
## X209189_at 5.771262e-02 1.806990e-02 0.0452665973 0.0126246651
## X209219_at 3.154835e-02 2.533405e-02 0.0538336984 0.0556968601
## X209335_at -8.598170e-02 4.283065e-02 -0.0273649810 0.0383993376
## X209365_s_at -7.153127e-03 3.400463e-02 -0.0025433107 -0.0315162281
## X209447_at -9.915183e-03 3.492124e-02 0.0090801008 0.0182419708
## X209458_x_at 2.574826e-03 -5.403055e-03 0.0039698222 0.0018588495
## X209821_at -3.146370e-02 -2.223481e-02 -0.0259618706 0.0288616571
## X209825_s_at 1.669273e-02 -4.123129e-03 -0.0636565809 -0.0178057664
## X210095_s_at -1.396666e-02 -2.778985e-02 0.0298137269 0.0313324771
## X210481_s_at -4.969524e-02 -2.858282e-02 -0.0836249681 0.0327137439
## X210909_x_at -2.780644e-02 -4.857285e-02 0.0152937489 0.0402848874
## X211023_at -3.414558e-03 -9.271829e-03 0.0063121129 0.0092548563
## X211378_x_at 6.287279e-03 -3.234189e-03 -0.0099770386 -0.0001273391
## X211628_x_at -1.450445e-02 -1.422394e-02 0.0074061626 -0.0284745170
## X211699_x_at -1.052546e-02 -1.361688e-02 0.0031720910 -0.0015014739
## X211745_x_at 8.200528e-03 -4.984073e-03 0.0003436142 -0.0000910119
## X211765_x_at -9.487997e-03 -5.284883e-03 0.0086722794 0.0007178516
## X211978_x_at -6.437959e-03 -1.151503e-03 0.0123969848 0.0109592972
## X212149_at 3.685480e-02 -2.899099e-02 0.0172022483 0.0010712118
## X212551_at -1.249475e-02 -4.109663e-03 -0.0229419065 0.0094367612
## X212554_at -8.523705e-03 -7.190823e-03 0.0032338355 -0.0144616102
## X212661_x_at -1.019409e-02 -6.294921e-03 0.0065214649 -0.0036619599
## X213068_at 3.495953e-02 -2.048909e-02 -0.0081807234 -0.0087574928
## X213629_x_at -2.775847e-02 -5.514224e-03 0.0059086258 -0.0018559008
## X214414_x_at 2.028047e-03 1.574510e-02 -0.0103285893 0.0070774494
## X214421_x_at -2.688277e-03 5.401636e-03 0.0046495453 -0.0035567995
## X214710_s_at -7.684422e-03 -1.010690e-02 -0.0440313921 0.0201790291
## X215138_s_at -5.884636e-03 1.757908e-02 -0.0007037435 0.0010844837
## X215330_at -2.209015e-02 8.604626e-03 -0.0193071285 -0.0126965720
## X215768_at -3.387486e-03 3.566253e-02 -0.0135156905 0.0144360073
## X216025_x_at -3.183820e-03 6.235061e-03 0.0066452582 0.0047840537
## X216661_x_at -1.542921e-03 1.732534e-02 -0.0085493025 -0.0058035650
## X216782_at -3.997666e-03 1.624469e-02 0.0039329387 -0.0190495546
## X217165_x_at -7.585753e-03 9.697016e-03 -0.0022826927 -0.0026098546
## X217319_x_at 1.321176e-02 -1.424835e-02 -0.0538785046 0.0073300114
## X217414_x_at -6.173810e-03 1.490252e-04 -0.0017446008 0.0064839409
## X217521_at 3.038070e-03 4.226978e-03 -0.0150487625 -0.0066044530
## X218002_s_at -1.022777e-02 -6.952084e-02 -0.0606503174 0.0205179379
## X218061_at -7.721468e-03 -5.437276e-02 -0.0225894745 0.0057635375
## X219485_s_at -2.715167e-02 -7.832146e-02 -0.0200705176 -0.0918492178
## X219787_s_at 4.444134e-02 5.524391e-03 -0.0007998325 -0.0437827225
## X220017_x_at 3.390996e-05 1.084165e-02 0.0024651832 -0.0019128096
## X220114_s_at 3.380188e-02 -2.772545e-02 0.0650259392 -0.0295106505
## X220116_at 1.585708e-03 -3.368263e-03 0.0166056439 -0.0062029101
## X220148_at 3.303135e-02 1.743987e-02 0.0028804204 -0.0550094013
## X220491_at 6.255946e-02 2.043495e-02 -0.0026904311 -0.0038551992
## X220496_at 6.292897e-02 2.199202e-02 -0.0045911198 -0.0288590826
## X36829_at 4.523150e-02 -1.662262e-02 -0.0030977478 0.0055904636
## Dim.71 Dim.72 Dim.73 Dim.74
## X200606_at 0.0020590340 -2.970389e-03 -8.729609e-03 -0.0014268431
## X200734_s_at 0.0234536648 -2.088446e-03 -3.431080e-02 -0.0113554368
## X200882_s_at -0.0024793052 1.149808e-02 2.225775e-02 -0.0531352117
## X200910_at 0.0239502224 -1.797206e-02 2.859476e-03 0.0167745754
## X200954_at 0.0057525779 2.553473e-02 2.659784e-03 -0.0024758273
## X201128_s_at -0.0731429365 -3.920532e-02 4.984705e-02 -0.0315178416
## X201184_s_at -0.0062843259 -2.102284e-02 8.811477e-03 -0.0130187908
## X201293_x_at 0.0012253001 -6.464435e-04 4.176918e-03 0.0094589464
## X201398_s_at 0.0155611623 -9.079806e-03 1.115306e-02 0.0144290729
## X201441_at -0.0066549387 1.167941e-02 -6.399125e-03 -0.0050289621
## X201453_x_at 0.0314493353 1.569948e-04 -1.447143e-02 0.0291175730
## X201516_at -0.0064014114 -7.229546e-03 -1.563461e-02 0.0188847709
## X201527_at 0.0085263171 -1.639746e-02 -3.023750e-03 0.0272405498
## X201531_at 0.0111335206 -2.605172e-02 1.584265e-02 -0.0889870186
## X201577_at -0.0057448727 5.615931e-02 2.725392e-02 -0.0510079689
## X201584_s_at 0.0262820494 1.235337e-02 7.241611e-03 0.0010774203
## X201656_at -0.0092629543 -1.503203e-02 4.046835e-03 0.0236661903
## X202541_at -0.0246341940 -1.479857e-03 -8.686864e-03 -0.0128299530
## X202737_s_at 0.0153622015 2.646152e-02 -1.956571e-02 0.0068928208
## X202861_at 0.0132752242 1.292109e-02 4.261047e-02 -0.0185088001
## X202940_at 0.0049155702 6.438355e-03 -2.594265e-05 0.0022809751
## X202963_at -0.0002120641 4.521664e-03 -7.262644e-03 -0.0064264034
## X203316_s_at -0.0479861789 -2.429947e-02 -4.455306e-02 0.0024181158
## X203554_x_at -0.0015042392 -1.520670e-02 2.877635e-02 -0.0216592173
## X203755_at -0.0589750978 2.404462e-02 -4.250369e-02 -0.0536950077
## X204018_x_at -0.0050753952 4.521381e-04 -3.519893e-03 -0.0046170777
## X204301_at 0.0082714616 -5.207798e-04 7.243681e-03 -0.0040467197
## X204428_s_at 0.0589797299 8.169946e-02 1.229696e-02 0.0164712496
## X204641_at 0.0218398801 1.027189e-02 3.168922e-02 0.0021754679
## X204977_at 0.0147610051 -5.097115e-03 -1.591034e-02 -0.0093987507
## X205019_s_at 0.0055001948 -1.542974e-02 -2.476137e-02 0.0287204359
## X205086_s_at 0.0009869423 -5.501956e-03 -8.384898e-03 -0.0140591315
## X205298_s_at -0.0017436358 -9.474478e-03 -1.747367e-03 -0.0166047682
## X205306_x_at -0.0011053782 1.628545e-02 5.728471e-02 0.0113966347
## X205392_s_at -0.0156600769 2.653400e-04 -5.681786e-02 -0.0226431622
## X205440_s_at 0.0133180401 -2.386780e-02 -9.856096e-03 -0.0104797322
## X205531_s_at -0.0012316221 -6.085640e-04 1.468872e-02 0.0014793817
## X205554_s_at 0.0063419977 -2.689330e-02 -1.007105e-02 -0.0311537592
## X205740_s_at -0.0486344691 -1.526615e-02 9.826199e-03 -0.0163043319
## X205819_at -0.0197930621 1.140591e-02 -7.492669e-02 -0.0138620983
## X205858_at -0.0001028727 1.752887e-04 -7.787890e-03 0.0140483299
## X205866_at 0.0642168325 -6.263396e-02 2.658490e-02 -0.0167774292
## X205890_s_at 0.0275910639 5.739501e-03 1.209556e-02 0.0150629504
## X205911_at 0.0118691999 -3.621864e-02 1.147595e-03 0.0002135930
## X206380_s_at -0.0076314520 5.606434e-02 3.714147e-02 0.0240572588
## X206453_s_at -0.0734226140 2.845029e-02 1.027429e-02 -0.0436142203
## X206643_at -0.0193993730 9.260225e-03 -2.392282e-03 0.0082218338
## X206680_at -0.0568498697 -3.176809e-02 1.171531e-02 0.0165939189
## X207076_s_at -0.0117360746 -5.187757e-02 -4.002689e-02 -0.0237275917
## X207218_at 0.0089621406 4.026090e-02 1.662891e-02 -0.0111801436
## X207262_at 0.0011785861 -1.928788e-02 8.147946e-02 0.0802153597
## X207330_at -0.0056887352 -3.336711e-03 -1.264318e-02 0.0022110898
## X207609_s_at -0.0318267777 -4.372704e-02 -2.756700e-03 0.0189949975
## X207804_s_at -0.1066586521 3.827653e-02 6.963933e-02 0.0209789936
## X207828_s_at 0.0044968952 2.607365e-02 -2.217961e-02 -0.0118796677
## X207995_s_at 0.0066287515 1.004738e-02 9.443717e-03 0.0140070295
## X208079_s_at -0.0152112200 -3.619328e-02 -7.079835e-03 0.1130559820
## X208147_s_at -0.0416524554 -4.141452e-02 5.360623e-02 -0.0077136828
## X208816_x_at -0.0270927047 -7.860921e-03 2.022854e-02 0.0161035529
## X209189_at -0.0194466660 1.041193e-03 4.000412e-03 0.0559502657
## X209219_at 0.0114844708 3.963692e-02 4.596935e-02 0.0183426768
## X209335_at -0.0325213851 5.018043e-02 -1.203588e-03 0.0265616420
## X209365_s_at 0.0300574994 5.947791e-02 -2.549290e-02 0.0103009760
## X209447_at 0.0088920363 -5.064620e-04 -1.602380e-02 0.0202854247
## X209458_x_at -0.0046822109 1.145075e-03 -9.263228e-03 -0.0072290979
## X209821_at 0.0256193104 3.923151e-02 -7.377054e-03 -0.0012353974
## X209825_s_at -0.0287181017 -3.381426e-02 -6.111522e-02 -0.0031647400
## X210095_s_at 0.0109210048 2.687954e-02 -1.170007e-02 -0.0409703869
## X210481_s_at 0.0034194223 -2.742272e-02 1.461268e-02 -0.0080020588
## X210909_x_at -0.0096461840 4.244012e-03 2.909616e-03 -0.0235147300
## X211023_at 0.0209523365 9.062032e-03 1.403027e-02 0.0060552250
## X211378_x_at -0.0005479791 -4.257120e-03 4.178516e-03 0.0122021654
## X211628_x_at -0.0065361674 6.159721e-04 2.087046e-03 -0.0006705991
## X211699_x_at 0.0053066939 -6.551613e-03 -8.706885e-03 0.0073735758
## X211745_x_at 0.0069380662 -8.819862e-03 -1.635432e-03 -0.0064583242
## X211765_x_at 0.0007709073 2.098053e-03 3.509061e-03 0.0180437543
## X211978_x_at -0.0142076798 -1.480185e-02 -1.328233e-03 0.0034336457
## X212149_at -0.0179199866 1.802980e-03 -2.655753e-02 -0.0059890639
## X212551_at 0.0138115973 -4.476071e-03 -1.352587e-02 -0.0096056122
## X212554_at 0.0227955104 4.614700e-03 -2.142999e-02 0.0194174725
## X212661_x_at 0.0035288230 -5.567026e-03 -6.693995e-04 0.0034598773
## X213068_at 0.0139438556 -3.070009e-02 3.135147e-02 -0.0162654676
## X213629_x_at -0.0060944187 1.416665e-02 -1.762501e-03 -0.0103811228
## X214414_x_at 0.0088821360 -1.643207e-04 1.239891e-02 0.0119084750
## X214421_x_at -0.0049470640 5.642445e-03 -5.038796e-03 -0.0021843025
## X214710_s_at 0.0267620038 -3.012145e-02 4.664803e-02 -0.0565851191
## X215138_s_at 0.0035583079 1.386501e-02 2.980705e-03 -0.0114783644
## X215330_at 0.0066607416 -2.492680e-03 -1.389316e-02 0.0079859130
## X215768_at 0.0134259513 2.153634e-02 -3.673979e-03 0.0047056323
## X216025_x_at -0.0083043326 9.460683e-03 -8.620606e-03 0.0026067969
## X216661_x_at -0.0004211847 5.229988e-03 -1.734299e-02 -0.0083124077
## X216782_at -0.0093871789 8.028638e-03 -4.021179e-04 -0.0294483654
## X217165_x_at -0.0047973179 -3.215843e-03 -4.053809e-03 -0.0132594551
## X217319_x_at 0.0572477964 -3.222505e-02 -3.501416e-02 -0.0280623218
## X217414_x_at -0.0059896433 2.011182e-03 4.652693e-03 -0.0024366842
## X217521_at 0.0307272477 8.140304e-03 -2.024700e-02 0.0033664745
## X218002_s_at -0.0194069318 -2.544471e-02 -7.895923e-02 0.0521024120
## X218061_at -0.0142104768 -1.436651e-02 -2.534006e-03 0.0027078400
## X219485_s_at -0.0050996753 2.669596e-02 -5.567088e-03 -0.0210630539
## X219787_s_at 0.0283594344 1.383846e-05 -9.000480e-03 0.0006654966
## X220017_x_at -0.0079434131 1.278830e-02 -1.235092e-02 0.0013471176
## X220114_s_at 0.0379303060 4.877765e-02 -2.024605e-02 -0.0074769083
## X220116_at -0.0415662958 -1.431389e-02 8.183690e-03 -0.0326859012
## X220148_at -0.0277633747 -5.670998e-02 -1.975062e-02 0.0202466358
## X220491_at -0.0380316012 -1.317305e-03 -1.585201e-02 -0.0085420359
## X220496_at 0.0817016239 -9.730705e-02 4.472017e-02 -0.0193244917
## X36829_at -0.0056103727 1.162677e-02 -2.142917e-02 0.0158143127
## Dim.75 Dim.76 Dim.77 Dim.78
## X200606_at -0.0090713175 -1.610894e-02 3.397247e-02 0.0012850939
## X200734_s_at -0.0077202704 7.658839e-03 2.555654e-03 -0.0014186500
## X200882_s_at -0.0222233566 1.739151e-02 1.505314e-02 -0.0376413826
## X200910_at 0.0452186213 2.922015e-02 -2.468153e-02 0.0246777895
## X200954_at -0.0077465378 1.016873e-02 1.259735e-02 -0.0083604757
## X201128_s_at 0.0401558587 -1.279727e-02 -1.388601e-02 0.0467600511
## X201184_s_at -0.0036968405 -1.599563e-02 8.165540e-06 -0.0165199950
## X201293_x_at -0.0102645302 -8.612414e-03 -2.598812e-03 0.0035248470
## X201398_s_at -0.0302681448 1.595199e-02 -1.857840e-02 -0.0046272651
## X201441_at 0.0234280980 2.006823e-02 7.784718e-03 -0.0345900577
## X201453_x_at -0.0229166378 1.704520e-02 4.413570e-02 -0.0237497661
## X201516_at 0.0222680959 -1.080715e-02 3.912634e-03 0.0276024157
## X201527_at -0.0294954552 -5.708627e-03 -2.594450e-02 -0.0173991892
## X201531_at -0.0326993854 1.447347e-02 -7.203432e-02 -0.0168934127
## X201577_at -0.0811315635 -3.938386e-02 -1.423927e-02 0.0162325774
## X201584_s_at 0.0355472433 -4.434804e-02 3.660817e-02 -0.0259868422
## X201656_at 0.0157010063 1.944766e-02 -2.645871e-02 -0.0014153757
## X202541_at 0.0129603689 -2.049662e-03 4.777463e-03 0.0134409882
## X202737_s_at 0.0323416439 2.059368e-02 -2.517738e-03 -0.0131574630
## X202861_at 0.0080738812 2.101960e-02 3.450510e-03 -0.0019851868
## X202940_at 0.0025794523 6.596373e-03 5.379654e-04 0.0015256303
## X202963_at 0.0322857132 -6.193776e-03 1.512106e-03 0.0190959204
## X203316_s_at -0.0443172693 -2.991496e-02 -9.959360e-03 -0.0026436131
## X203554_x_at 0.0053671185 5.074835e-02 3.026448e-02 -0.0042445463
## X203755_at 0.0195919481 -4.919541e-02 -1.309400e-03 -0.0097589368
## X204018_x_at -0.0021180578 -1.103197e-02 -2.986926e-03 0.0047412657
## X204301_at 0.0007141978 -3.097894e-03 -3.486743e-03 -0.0012177890
## X204428_s_at 0.0020386115 -5.536335e-03 -8.042877e-03 0.0374723596
## X204641_at 0.0044077616 -1.925568e-02 2.063437e-03 0.0502202193
## X204977_at -0.0006664482 3.578738e-02 -1.597182e-02 -0.0146936519
## X205019_s_at -0.0102045591 -2.733713e-02 1.562318e-02 -0.0026343633
## X205086_s_at -0.0100731966 2.263351e-02 -1.619360e-02 0.0068374216
## X205298_s_at -0.0040865093 1.468539e-03 -9.700242e-04 -0.0080686597
## X205306_x_at -0.0098393198 -1.938379e-02 2.087969e-02 -0.0007133360
## X205392_s_at -0.0051411994 -3.062566e-02 -4.282396e-02 0.0234740332
## X205440_s_at -0.0471022302 -1.449574e-02 -7.215981e-03 0.0110254633
## X205531_s_at 0.0283970258 -2.387972e-02 -7.249515e-04 -0.0361355901
## X205554_s_at 0.0222854486 1.877200e-02 2.217037e-02 -0.0014700803
## X205740_s_at -0.0133281116 -2.972610e-02 -5.379254e-03 0.0125606518
## X205819_at 0.0067071317 -9.698912e-03 4.500953e-02 -0.0108724684
## X205858_at 0.0159811532 2.342353e-02 6.148156e-04 0.0170463344
## X205866_at 0.0013827988 -1.533040e-02 2.552760e-02 0.0010650423
## X205890_s_at -0.0412702031 -2.843105e-03 -3.096115e-02 0.0081099228
## X205911_at -0.0253649888 3.421362e-02 4.923522e-02 -0.0457006773
## X206380_s_at -0.0058009718 5.772436e-02 -9.716807e-03 -0.0219157272
## X206453_s_at -0.0063929899 3.053695e-02 1.395882e-02 0.0319420181
## X206643_at -0.0186748326 -4.799375e-03 1.692505e-02 0.0008457356
## X206680_at -0.0003400239 -6.012767e-03 5.678082e-03 0.0027610667
## X207076_s_at 0.0277468597 5.220029e-02 -3.481327e-02 -0.0069899496
## X207218_at 0.0032666256 -7.550619e-02 3.195398e-02 0.0074780747
## X207262_at -0.0216507868 -6.389349e-04 -3.672674e-02 -0.0151542744
## X207330_at 0.0081326361 4.872601e-03 -3.991292e-03 -0.0014116298
## X207609_s_at -0.0428046107 -8.537335e-02 -2.914417e-02 -0.0164727207
## X207804_s_at 0.0089498108 1.774429e-04 1.404659e-03 -0.0390981107
## X207828_s_at -0.0251728531 6.844316e-03 -3.915294e-03 0.0574221263
## X207995_s_at 0.0563184490 9.476084e-04 -2.941803e-02 -0.0403839806
## X208079_s_at -0.0245073246 1.179475e-02 -1.374343e-02 0.0479073183
## X208147_s_at -0.0444378368 1.081641e-02 -5.421153e-03 0.0222445720
## X208816_x_at 0.0160008343 1.766831e-02 2.969178e-02 0.0394981047
## X209189_at 0.0083707231 -1.188959e-02 9.127027e-02 -0.0001879267
## X209219_at 0.0610528892 -3.005976e-02 -7.073434e-02 0.0217576624
## X209335_at 0.0468072907 -1.023975e-02 -2.303004e-02 -0.0234938836
## X209365_s_at 0.0259600549 -3.798921e-04 -5.067617e-02 0.0088510571
## X209447_at -0.0130110004 3.030009e-02 1.631012e-02 0.0338170458
## X209458_x_at -0.0026756183 -1.280508e-02 3.835669e-03 -0.0048847514
## X209821_at -0.0112267425 -1.522466e-02 8.542497e-04 -0.0178936368
## X209825_s_at 0.0200037021 4.447670e-03 2.904381e-02 0.0052353178
## X210095_s_at 0.0145970852 1.461690e-03 1.039519e-02 0.0168529325
## X210481_s_at -0.0141746338 -5.531954e-02 1.711839e-05 0.0446497243
## X210909_x_at 0.0215195098 -2.984515e-03 -2.168892e-03 -0.0198813303
## X211023_at -0.0083715479 7.038870e-03 7.045008e-03 -0.0269573313
## X211378_x_at 0.0041378350 -8.213686e-03 1.098908e-02 -0.0049109512
## X211628_x_at 0.0003818350 -4.144647e-03 6.360097e-03 0.0185586019
## X211699_x_at 0.0002249003 1.460275e-03 1.370919e-03 0.0003238744
## X211745_x_at -0.0032399852 1.257095e-03 -3.227630e-03 -0.0035986752
## X211765_x_at -0.0109738255 -1.167950e-02 -1.844564e-04 0.0009110779
## X211978_x_at -0.0082806179 8.873583e-05 -1.542809e-03 -0.0048441637
## X212149_at 0.0246353700 -1.269351e-02 5.101209e-03 -0.0016238548
## X212551_at -0.0103294510 -3.320892e-03 1.936707e-02 -0.0290306933
## X212554_at 0.0124417560 7.297427e-03 -7.963535e-03 -0.0131924395
## X212661_x_at -0.0074109831 5.446858e-05 -3.582949e-03 0.0116253320
## X213068_at 0.0004583407 -4.657411e-03 1.622150e-02 -0.0070522762
## X213629_x_at 0.0110615701 -8.227786e-03 7.274261e-03 0.0217898421
## X214414_x_at 0.0058441807 2.070527e-02 -7.691786e-03 -0.0098845524
## X214421_x_at 0.0081002956 7.216317e-03 2.177194e-03 -0.0019786072
## X214710_s_at 0.0385188768 3.803772e-02 -4.518908e-03 -0.0145959588
## X215138_s_at 0.0114440335 -3.484991e-03 -7.996232e-03 -0.0048662188
## X215330_at -0.0013764307 -2.573529e-03 1.010080e-03 0.0014178705
## X215768_at 0.0092933546 1.652588e-03 7.805448e-03 -0.0043289596
## X216025_x_at 0.0129573862 8.527209e-03 8.160323e-03 -0.0043413693
## X216661_x_at -0.0004931177 8.875844e-03 -2.525229e-03 0.0045260217
## X216782_at -0.0121991466 -5.384066e-04 -5.771663e-03 -0.0051227265
## X217165_x_at -0.0017972807 -2.488431e-03 -7.772426e-03 0.0095877731
## X217319_x_at 0.0183579282 -3.633298e-02 -1.241626e-02 0.0197932807
## X217414_x_at -0.0066796139 3.105190e-03 -1.059325e-03 -0.0003439012
## X217521_at -0.0032087126 -1.627725e-02 -2.749055e-03 0.0029998766
## X218002_s_at 0.0032339347 7.082669e-03 -5.365562e-02 -0.0024204229
## X218061_at -0.0156372419 1.895358e-02 3.306373e-02 -0.0145764676
## X219485_s_at 0.0465668270 9.786764e-03 -9.860587e-03 0.0213332706
## X219787_s_at -0.0484502553 -2.865723e-02 -4.095162e-02 -0.1090480075
## X220017_x_at 0.0099773112 4.746486e-03 4.117048e-03 -0.0046152644
## X220114_s_at -0.0859021666 7.105520e-02 6.509011e-03 0.0571313215
## X220116_at -0.0207407633 3.139923e-02 -1.902760e-02 0.0180159561
## X220148_at 0.0135927261 4.098046e-02 -4.285537e-02 -0.0103390904
## X220491_at -0.0038355698 3.407444e-02 1.729533e-02 -0.0124663319
## X220496_at 0.0436534400 -2.902932e-02 1.495955e-02 0.0293651795
## X36829_at 0.0218109112 -1.940011e-02 1.186059e-02 -0.0031421166
## Dim.79 Dim.80 Dim.81 Dim.82
## X200606_at 0.0158016036 -0.0070553841 -9.203476e-03 -0.0027568138
## X200734_s_at -0.0044871754 0.0029758887 -1.320377e-02 -0.0056138773
## X200882_s_at -0.0349738927 -0.0081748664 3.305350e-03 0.0018775059
## X200910_at 0.0465132202 -0.0232248703 -1.139769e-02 0.0313739122
## X200954_at -0.0143925062 -0.0195797426 -4.017257e-03 -0.0036510867
## X201128_s_at 0.0561880198 0.0322953198 1.571996e-02 0.0164878728
## X201184_s_at 0.0083091256 -0.0007837324 -2.797356e-03 -0.0121059177
## X201293_x_at -0.0058692501 -0.0064408278 3.871959e-03 0.0052945745
## X201398_s_at -0.0243289426 -0.0035816831 6.622950e-03 0.0137182473
## X201441_at -0.0021912472 -0.0060553219 2.843717e-02 0.0055637776
## X201453_x_at -0.0089231923 -0.0164917466 -1.842521e-02 -0.0181357879
## X201516_at -0.0053193743 0.0230542989 3.642534e-03 0.0045461464
## X201527_at 0.0062363905 0.0165808547 8.314964e-03 -0.0036858422
## X201531_at -0.0143424921 0.0183674056 1.179428e-02 0.0208482029
## X201577_at 0.0235486079 0.0178491116 -5.255112e-02 -0.0363565746
## X201584_s_at -0.0002968668 0.0061949012 9.945201e-03 -0.0098286748
## X201656_at 0.0191775676 0.0029190788 2.098298e-02 0.0050790489
## X202541_at -0.0231228142 -0.0073398114 6.123897e-04 0.0151344664
## X202737_s_at -0.0125046883 -0.0076494035 -1.238440e-02 0.0044845377
## X202861_at -0.0364853965 0.0111863222 2.145271e-02 -0.0380242351
## X202940_at -0.0088677759 0.0037788026 8.031379e-03 -0.0005574713
## X202963_at 0.0128890710 -0.0032672458 -2.032922e-02 -0.0161245533
## X203316_s_at -0.0078218543 0.0136437084 6.964083e-03 0.0190820662
## X203554_x_at -0.0012723756 -0.0134468103 -2.441650e-02 0.0590162582
## X203755_at -0.0111048464 -0.0856683470 8.618633e-02 0.0037457986
## X204018_x_at -0.0107557008 0.0068996460 3.625471e-03 -0.0059840562
## X204301_at -0.0120549912 0.0059953653 5.507116e-03 -0.0051639216
## X204428_s_at 0.0552512783 -0.0222917012 -8.772512e-02 0.0483429654
## X204641_at -0.0297201872 0.0413782235 -9.963782e-03 -0.0679677062
## X204977_at -0.0232591238 0.0035562239 7.674765e-04 0.0033899479
## X205019_s_at -0.0194912019 0.0187802664 3.294380e-02 0.0994034817
## X205086_s_at 0.0031356257 0.0038132471 -1.768033e-03 0.0181487365
## X205298_s_at -0.0022704220 -0.0052873339 2.257046e-05 0.0049413808
## X205306_x_at 0.0286218755 0.0053314734 2.667902e-02 0.0102048361
## X205392_s_at -0.0355925257 -0.0640434461 -4.048165e-02 0.0036831615
## X205440_s_at 0.0179951738 -0.0091506334 1.288955e-02 0.0003903496
## X205531_s_at -0.0069483760 0.0280156246 2.878590e-02 0.0305164761
## X205554_s_at 0.0302684612 0.0189208826 4.325633e-03 -0.0064204290
## X205740_s_at 0.0161824651 -0.0087285402 -1.835213e-02 -0.0152838851
## X205819_at 0.0160352790 0.0247920623 -2.810547e-02 0.0174961334
## X205858_at 0.0042177701 -0.0019416620 1.494774e-02 -0.0013483075
## X205866_at 0.0057834253 0.0615220184 3.447092e-03 -0.0049226694
## X205890_s_at -0.0187043558 -0.0072135150 1.552039e-02 0.0143485814
## X205911_at 0.0054924215 -0.0090788344 -2.201420e-03 -0.0190857072
## X206380_s_at -0.0174506526 -0.0557615490 2.356485e-02 -0.0174430632
## X206453_s_at -0.0264376890 0.0237224632 4.674866e-03 -0.0091542573
## X206643_at 0.0018356026 0.0022248283 1.226074e-02 -0.0195074575
## X206680_at 0.0141180598 0.0389619892 8.858659e-03 -0.0165698965
## X207076_s_at 0.0545637876 -0.0090765761 -2.908289e-02 -0.0256170743
## X207218_at 0.0141173970 0.0267941439 2.241381e-02 0.0097764272
## X207262_at -0.0001326719 -0.0367179353 2.410751e-02 -0.0092568370
## X207330_at 0.0086508717 0.0038746494 4.325378e-03 -0.0005230592
## X207609_s_at -0.0537434436 -0.0232687861 -4.700724e-02 0.0263986889
## X207804_s_at -0.0087806883 0.0259281147 -3.736288e-02 0.0116744354
## X207828_s_at -0.0188922303 0.0268946846 -6.833438e-03 0.0055538938
## X207995_s_at -0.0366109214 0.0501543198 -3.796659e-02 -0.0032020225
## X208079_s_at -0.0454099624 0.0192924726 -7.465269e-03 0.0030864235
## X208147_s_at 0.0414562350 -0.0133762521 -1.107967e-02 0.0281624179
## X208816_x_at -0.0175701239 0.0196914480 -6.310005e-03 0.0083321284
## X209189_at 0.0123072727 -0.0163722364 -1.445013e-02 -0.0125472953
## X209219_at 0.0155646316 0.0043121650 -5.230846e-03 -0.0091357301
## X209335_at -0.0056100542 -0.0372990367 -1.824062e-02 -0.0522565023
## X209365_s_at -0.0188091493 0.0537815190 5.555965e-02 0.0452716878
## X209447_at -0.0097372576 0.0187050548 -5.569595e-03 -0.0038185099
## X209458_x_at -0.0041891342 0.0031174802 1.237442e-03 0.0047048089
## X209821_at -0.0184349584 -0.0022032212 -4.979721e-03 0.0135424500
## X209825_s_at 0.0101117999 0.0011492213 -6.734590e-03 -0.0128984218
## X210095_s_at -0.0318725713 -0.0002922940 -3.999227e-02 -0.0001880115
## X210481_s_at 0.0390969856 -0.0455538593 1.850334e-02 -0.0045924260
## X210909_x_at 0.0135545762 0.0261396897 1.992796e-02 -0.0070384982
## X211023_at -0.0070353113 -0.0099994380 6.094147e-03 0.0022663318
## X211378_x_at 0.0021194793 0.0032973604 1.589228e-02 0.0033084289
## X211628_x_at 0.0141796388 -0.0021545288 -1.362394e-02 -0.0053145657
## X211699_x_at 0.0079417159 0.0066455513 -9.285913e-03 0.0025293776
## X211745_x_at -0.0012522313 0.0038171758 -3.636484e-03 -0.0057309599
## X211765_x_at -0.0072961137 -0.0001461093 2.245045e-03 0.0098174795
## X211978_x_at -0.0092130973 -0.0075713013 -5.853000e-03 0.0095005718
## X212149_at -0.0004071493 0.0158213090 -5.405891e-03 -0.0098512889
## X212551_at -0.0083887917 0.0147796559 -7.741040e-03 0.0094184977
## X212554_at 0.0118979421 0.0075698729 5.106185e-03 -0.0075633759
## X212661_x_at -0.0064462522 -0.0022479900 5.902767e-03 -0.0047185814
## X213068_at -0.0057923279 -0.0083336588 -1.375653e-02 0.0055869567
## X213629_x_at -0.0004349392 0.0041834098 8.867011e-04 0.0065115511
## X214414_x_at -0.0055706138 -0.0193565465 4.975430e-03 0.0104096361
## X214421_x_at 0.0042903496 -0.0015572028 5.978693e-03 -0.0048322015
## X214710_s_at 0.0018772003 -0.0192209806 -3.569780e-02 0.0466230043
## X215138_s_at 0.0027726435 0.0060130934 1.380846e-04 -0.0043093538
## X215330_at 0.0030595947 -0.0041947891 1.913825e-03 0.0026048802
## X215768_at 0.0177746800 0.0004813337 1.722662e-02 0.0046188626
## X216025_x_at 0.0015631768 -0.0058444222 2.969102e-03 -0.0052467910
## X216661_x_at -0.0036100851 -0.0033898593 8.948261e-03 -0.0019745958
## X216782_at -0.0058475585 0.0033161117 -8.376222e-03 -0.0088777505
## X217165_x_at -0.0018345469 -0.0125749602 1.405757e-03 -0.0047888728
## X217319_x_at -0.0413046877 0.0234178680 3.608231e-03 -0.0287688086
## X217414_x_at -0.0070166611 -0.0074180284 5.109137e-03 -0.0002163605
## X217521_at -0.0088027193 -0.0192209355 -3.479917e-02 0.0101314304
## X218002_s_at 0.0552937336 0.0031012296 1.346461e-02 -0.0223470828
## X218061_at -0.0067854257 -0.0039723064 2.178060e-03 0.0028797400
## X219485_s_at 0.0095288341 -0.0104061128 2.034708e-02 -0.0077429418
## X219787_s_at 0.0750112575 0.0312431300 -8.264894e-03 -0.0230241886
## X220017_x_at 0.0025022432 -0.0037740212 1.350349e-03 0.0012067860
## X220114_s_at 0.0378466938 0.0025486201 4.701969e-02 -0.0109789219
## X220116_at -0.0145542795 0.0071910705 -3.476909e-03 -0.0044672355
## X220148_at -0.0382435310 0.0050514118 -3.483057e-02 -0.0119014962
## X220491_at -0.0062481114 -0.0034441988 -5.586011e-03 0.0064688447
## X220496_at -0.0163444216 -0.0532209260 1.390396e-02 -0.0225563385
## X36829_at 0.0369584689 -0.0126396598 -1.967803e-02 0.0318311871
## Dim.83 Dim.84 Dim.85 Dim.86
## X200606_at -0.0089642564 -5.981192e-03 1.282887e-02 1.449052e-02
## X200734_s_at -0.0044412720 1.692504e-02 -4.074954e-03 3.500441e-03
## X200882_s_at 0.0225448597 -4.653866e-02 1.607490e-02 3.948965e-02
## X200910_at -0.0105547917 8.581645e-02 1.206844e-02 -6.488766e-02
## X200954_at 0.0053087127 -1.459928e-02 -4.533185e-04 -2.394779e-03
## X201128_s_at 0.0191175673 -3.247054e-02 8.521813e-03 -1.212769e-02
## X201184_s_at -0.0065211286 2.528059e-04 2.303096e-03 4.115684e-03
## X201293_x_at -0.0020746489 -6.958938e-05 9.352398e-04 -5.933738e-03
## X201398_s_at 0.0151872183 -1.904366e-03 8.593740e-03 5.568606e-03
## X201441_at 0.0061794162 -2.368143e-02 1.036822e-03 6.818894e-05
## X201453_x_at 0.0077272836 8.082930e-03 6.996832e-03 -5.276997e-03
## X201516_at -0.0054023488 -3.899744e-03 -1.049912e-02 -1.042270e-02
## X201527_at -0.0126230804 8.366337e-03 -8.853198e-03 4.808917e-03
## X201531_at -0.0164236609 2.678793e-02 -3.848468e-02 7.889298e-03
## X201577_at 0.0084023242 -2.689542e-03 4.465006e-03 3.081745e-02
## X201584_s_at 0.0159416753 8.675095e-03 -1.038451e-02 1.402195e-02
## X201656_at 0.0157956427 -1.162969e-02 4.075874e-03 1.041908e-02
## X202541_at -0.0050051676 3.886962e-03 1.756651e-05 -8.160136e-04
## X202737_s_at -0.0015580230 5.843338e-03 -3.661699e-03 -1.053503e-02
## X202861_at 0.0138897546 -8.089435e-03 -2.591316e-02 -3.725460e-02
## X202940_at -0.0023899523 -1.431090e-03 4.307961e-03 -7.223968e-03
## X202963_at 0.0035633283 -1.920275e-02 -4.008095e-04 -3.354985e-03
## X203316_s_at -0.0254913145 -1.272246e-02 -6.346220e-02 -2.239046e-02
## X203554_x_at 0.0278747443 -4.299897e-02 -2.283330e-02 -1.609834e-03
## X203755_at 0.0060398178 3.817444e-02 -3.075828e-02 1.927103e-02
## X204018_x_at 0.0020879593 -2.310943e-04 -4.125697e-03 4.307556e-03
## X204301_at -0.0013224905 -2.884018e-03 -3.968352e-03 -1.018267e-02
## X204428_s_at -0.0169821131 -3.059521e-04 -6.599302e-02 1.303932e-02
## X204641_at 0.0353895920 2.827494e-02 -2.302341e-03 2.064277e-02
## X204977_at 0.0032085528 4.549003e-03 5.510700e-03 1.292064e-03
## X205019_s_at 0.0080550049 1.478171e-02 -5.080222e-03 9.991300e-03
## X205086_s_at -0.0027423164 -4.572332e-03 -4.440682e-03 4.213938e-03
## X205298_s_at -0.0056982898 2.169886e-03 7.008397e-03 1.646749e-03
## X205306_x_at -0.0146532056 -7.947221e-03 1.451852e-03 2.972253e-03
## X205392_s_at -0.0098541244 -1.009309e-02 3.285835e-02 -1.669735e-03
## X205440_s_at 0.0024109116 2.981572e-03 5.216700e-03 8.121316e-03
## X205531_s_at 0.0133748359 -1.782274e-02 -1.056978e-02 -2.232194e-02
## X205554_s_at 0.0448495995 5.012433e-02 -1.856462e-02 2.403971e-02
## X205740_s_at 0.0054303465 9.590486e-05 1.790042e-02 1.570842e-03
## X205819_at 0.0235876802 -9.427419e-04 4.140455e-03 -3.800543e-03
## X205858_at 0.0094559649 -6.574932e-03 -5.115949e-03 -8.992516e-04
## X205866_at 0.0474351125 4.165069e-02 2.054983e-02 -1.142977e-02
## X205890_s_at 0.0075827737 7.150619e-03 1.007931e-03 -1.287732e-03
## X205911_at -0.0407795305 3.336486e-02 -1.229629e-02 1.033324e-02
## X206380_s_at 0.0072270470 1.504534e-02 9.219991e-04 1.403992e-02
## X206453_s_at -0.0231572271 2.330037e-02 -1.320074e-02 -3.674534e-02
## X206643_at -0.0047810239 -5.538049e-03 -1.015744e-03 1.196935e-02
## X206680_at -0.0505114461 -2.184276e-02 -3.856378e-03 -3.052639e-02
## X207076_s_at -0.0172544168 5.945468e-03 3.025091e-02 1.789520e-02
## X207218_at -0.0289548227 -2.964779e-03 -1.467401e-02 -2.308200e-02
## X207262_at -0.0050387411 -1.005935e-02 1.452596e-03 2.354530e-02
## X207330_at -0.0008909078 -6.490999e-03 4.974786e-03 -4.475950e-04
## X207609_s_at 0.0459462055 -1.072036e-02 2.978953e-02 -5.156476e-02
## X207804_s_at -0.0103209028 3.616833e-02 4.666613e-03 1.620323e-02
## X207828_s_at -0.0802806043 6.043307e-03 5.291008e-02 3.426139e-02
## X207995_s_at -0.0045146630 -2.741812e-02 -1.454465e-02 2.323002e-02
## X208079_s_at -0.0056594569 1.469311e-02 -2.339851e-02 5.499246e-05
## X208147_s_at 0.0062697233 -2.533241e-03 1.960109e-02 2.888546e-02
## X208816_x_at -0.0181269642 6.765963e-03 -2.069250e-03 2.063782e-03
## X209189_at 0.0229451871 -2.005956e-02 2.993405e-02 4.412377e-03
## X209219_at 0.0188667888 -1.249072e-02 -1.967065e-02 -4.708485e-03
## X209335_at -0.0082297674 -1.287005e-02 1.157208e-02 -5.151560e-02
## X209365_s_at -0.0205254949 -1.521221e-02 7.346302e-02 1.804926e-02
## X209447_at -0.0058056467 -1.623855e-02 -4.221899e-03 2.003562e-03
## X209458_x_at -0.0044923055 -3.644507e-03 -5.422839e-03 7.599390e-03
## X209821_at -0.0033080743 3.248303e-03 -4.336884e-03 -1.024597e-02
## X209825_s_at 0.0034274212 -3.403421e-02 6.044179e-03 -1.151204e-02
## X210095_s_at -0.0072072235 -9.474768e-04 -2.100425e-02 -5.049278e-03
## X210481_s_at 0.0309768462 6.953945e-03 9.076718e-03 -4.748837e-03
## X210909_x_at 0.0079936035 2.983749e-03 3.240091e-03 3.499321e-04
## X211023_at -0.0028962077 8.179327e-03 8.811465e-03 8.803069e-03
## X211378_x_at -0.0046610973 4.934674e-03 5.018870e-03 8.352636e-03
## X211628_x_at 0.0138567016 -8.676341e-03 4.964531e-03 2.662465e-03
## X211699_x_at -0.0051905037 8.986490e-03 -1.219068e-02 -3.519924e-03
## X211745_x_at -0.0031845622 3.176020e-03 1.876012e-03 -6.630209e-04
## X211765_x_at 0.0099525098 -3.427799e-03 7.472181e-03 8.801542e-03
## X211978_x_at -0.0055886101 4.708024e-03 -5.119098e-03 -9.761187e-03
## X212149_at -0.0147674882 4.776500e-03 -5.961593e-03 -2.066754e-03
## X212551_at -0.0158136717 -2.023349e-02 -2.688513e-02 -6.034412e-03
## X212554_at -0.0033232754 2.169539e-02 7.721948e-03 5.092018e-03
## X212661_x_at -0.0048988201 -3.928111e-03 -4.459583e-03 -3.534782e-03
## X213068_at -0.0013009269 1.134731e-02 -3.212303e-03 2.546977e-02
## X213629_x_at 0.0020623143 -8.091539e-03 -7.245509e-04 6.547296e-03
## X214414_x_at 0.0106747259 -1.427923e-03 2.145811e-02 -2.774951e-03
## X214421_x_at -0.0047599632 4.580466e-03 -5.722981e-03 -5.897452e-03
## X214710_s_at 0.0159291010 -3.257722e-02 1.342728e-02 -2.004146e-02
## X215138_s_at 0.0057296086 -2.748436e-03 1.949393e-03 -1.137393e-03
## X215330_at -0.0012637008 -1.946927e-03 1.945002e-03 -1.967104e-03
## X215768_at 0.0011758434 -1.888495e-04 -9.007798e-03 3.632316e-03
## X216025_x_at -0.0005591415 5.040770e-03 2.542026e-03 -6.068834e-03
## X216661_x_at 0.0037378245 5.039964e-03 3.242001e-03 -3.954006e-03
## X216782_at 0.0039002741 -5.360884e-04 -1.986990e-04 -7.076755e-03
## X217165_x_at 0.0075278209 6.367477e-03 3.590766e-03 9.631637e-04
## X217319_x_at 0.0216740183 -1.424808e-02 4.645999e-03 1.290895e-02
## X217414_x_at -0.0015352095 -6.143390e-03 1.868895e-03 3.900200e-03
## X217521_at 0.0163290425 2.328125e-02 1.735414e-02 -1.177921e-02
## X218002_s_at 0.0315172582 -3.087247e-02 -5.158380e-02 5.275943e-02
## X218061_at -0.0075477188 1.451295e-02 1.103431e-02 -1.312125e-02
## X219485_s_at 0.0073174827 2.530894e-03 2.650080e-02 4.306790e-03
## X219787_s_at -0.0316633854 -9.214141e-03 2.206321e-02 -4.131110e-02
## X220017_x_at -0.0008841514 -2.221808e-03 -2.630637e-03 4.640933e-03
## X220114_s_at 0.0281028923 -4.559616e-02 2.847576e-03 -6.533194e-02
## X220116_at -0.0056617255 1.057671e-02 5.675012e-03 6.867717e-04
## X220148_at 0.0164337424 4.509013e-04 1.966168e-05 -7.586492e-03
## X220491_at -0.0083053160 -1.033238e-02 -4.278021e-03 1.038716e-02
## X220496_at -0.0895694370 -3.996961e-02 -1.634497e-02 -1.071311e-03
## X36829_at -0.0267899498 -4.778881e-04 3.554808e-02 2.362419e-02
## Dim.87 Dim.88 Dim.89 Dim.90
## X200606_at 0.0071582918 4.109765e-03 7.037719e-03 -6.187553e-03
## X200734_s_at 0.0037375268 6.760597e-04 2.678062e-03 -3.340124e-03
## X200882_s_at 0.0207656107 1.374207e-02 -6.225070e-03 1.181412e-02
## X200910_at -0.0707197605 3.676252e-03 1.680564e-03 8.315293e-03
## X200954_at -0.0047239551 -2.142269e-03 1.047170e-02 5.833449e-05
## X201128_s_at -0.0107102997 1.214514e-02 -7.909269e-04 -6.021984e-04
## X201184_s_at 0.0117735084 -5.373435e-04 -1.014506e-02 -2.697391e-03
## X201293_x_at 0.0012159747 -4.755605e-04 2.145211e-03 1.321123e-03
## X201398_s_at 0.0025339529 1.542950e-02 1.283120e-02 1.139440e-02
## X201441_at -0.0066133038 -9.083047e-04 -4.117913e-03 1.871776e-05
## X201453_x_at -0.0158661876 -7.640785e-03 -4.544942e-03 -1.244501e-02
## X201516_at 0.0256862481 7.901526e-03 1.636001e-02 5.283064e-03
## X201527_at -0.0003180419 -6.780839e-03 -1.098965e-02 5.976627e-03
## X201531_at 0.0144962898 -2.205977e-03 5.724806e-03 1.810582e-02
## X201577_at -0.0303396469 5.275995e-03 -1.156040e-02 1.701718e-03
## X201584_s_at -0.0162517643 8.222226e-03 9.026557e-04 2.917014e-03
## X201656_at 0.0060979555 8.043264e-03 -5.137536e-03 -5.421718e-04
## X202541_at -0.0091280648 -5.755478e-03 -9.853309e-04 7.531473e-03
## X202737_s_at 0.0228912362 -5.356530e-03 -5.114213e-03 2.131721e-05
## X202861_at -0.0244357772 2.353768e-02 2.208964e-02 -5.833484e-02
## X202940_at -0.0002372543 2.153461e-04 6.271629e-03 -3.173956e-03
## X202963_at 0.0126248441 1.857603e-03 -9.425226e-03 -2.411796e-02
## X203316_s_at 0.0259187038 -4.168246e-02 -1.833949e-02 -1.376754e-02
## X203554_x_at -0.0108507639 1.189993e-02 5.105119e-02 6.056721e-02
## X203755_at -0.0168651224 -1.202057e-03 -1.780849e-02 8.146177e-03
## X204018_x_at -0.0020213882 4.939091e-03 5.099918e-04 -1.272885e-02
## X204301_at 0.0078287040 9.419980e-05 1.764742e-03 -2.249807e-04
## X204428_s_at 0.0234260264 -6.403544e-03 7.136586e-03 -9.908079e-03
## X204641_at -0.0102658414 -2.261395e-03 -3.416868e-02 1.400156e-02
## X204977_at -0.0063039716 9.230667e-04 -7.307535e-03 2.578349e-03
## X205019_s_at 0.0295444097 8.571197e-02 -5.837564e-02 -2.513881e-02
## X205086_s_at -0.0028673802 -8.760152e-03 -5.907825e-03 -1.822563e-03
## X205298_s_at -0.0021484900 3.286939e-03 -2.648597e-03 2.136012e-03
## X205306_x_at -0.0088623888 1.647040e-03 -1.441035e-02 7.313807e-03
## X205392_s_at -0.0232960495 -9.898246e-04 -8.049205e-03 -8.898142e-03
## X205440_s_at 0.0032081340 -7.669978e-04 9.011557e-03 1.923412e-03
## X205531_s_at 0.0019861245 1.982841e-03 4.636105e-02 2.199706e-02
## X205554_s_at -0.0047344400 1.292994e-02 5.581627e-02 -1.900922e-02
## X205740_s_at 0.0042871779 -6.174406e-04 -1.620959e-03 -1.522088e-03
## X205819_at -0.0129660297 1.091376e-02 6.132067e-03 -9.306314e-03
## X205858_at -0.0064726909 1.107638e-02 2.002604e-03 1.689892e-03
## X205866_at 0.0517815187 -1.854418e-02 -2.795751e-02 2.377577e-02
## X205890_s_at -0.0073897134 -1.060214e-03 6.708156e-04 1.388110e-03
## X205911_at 0.0106166591 -2.307622e-02 2.524421e-02 8.448610e-03
## X206380_s_at 0.0194067164 -1.200171e-02 5.697364e-03 -5.847600e-03
## X206453_s_at -0.0148757291 -3.848938e-03 -8.716624e-03 1.862983e-02
## X206643_at 0.0091212018 -2.922227e-02 1.074022e-02 -1.022048e-02
## X206680_at -0.0149554965 -6.449146e-03 -1.455948e-02 6.692223e-03
## X207076_s_at 0.0182570421 1.400765e-02 -3.206161e-02 -1.921216e-02
## X207218_at -0.0157747445 -1.004212e-02 2.475877e-03 4.268335e-03
## X207262_at -0.0041553686 -1.976543e-03 -1.467153e-02 2.163195e-03
## X207330_at -0.0034292530 -1.119214e-03 -3.904073e-03 -2.743760e-03
## X207609_s_at -0.0161907778 -1.204108e-02 3.142918e-02 1.295153e-02
## X207804_s_at 0.0287243329 -5.940932e-03 8.715106e-03 -1.487857e-03
## X207828_s_at 0.0206163076 5.051182e-02 4.961356e-02 -1.185120e-03
## X207995_s_at -0.0534099488 1.972272e-02 -3.229351e-02 2.246940e-02
## X208079_s_at 0.0037651887 -1.139013e-02 -2.989737e-03 -8.114390e-03
## X208147_s_at -0.0283819911 2.451241e-03 -1.207520e-02 -3.292465e-03
## X208816_x_at -0.0177902407 -3.145780e-04 4.224473e-03 -5.796776e-03
## X209189_at -0.0285522620 -6.574835e-04 -3.331115e-03 -2.276645e-02
## X209219_at 0.0244283024 9.670319e-03 1.905789e-02 -1.180835e-02
## X209335_at 0.0439841305 2.617459e-02 -1.559355e-02 2.908249e-02
## X209365_s_at -0.0195594953 -6.368435e-02 2.569678e-02 -3.587094e-02
## X209447_at 0.0131979791 -1.438993e-02 6.692592e-03 5.131588e-03
## X209458_x_at 0.0034557878 -4.244724e-03 -8.224958e-03 -2.765583e-03
## X209821_at -0.0049743146 -1.654106e-03 -1.127233e-02 -8.448371e-03
## X209825_s_at 0.0217579185 -9.397564e-03 1.549420e-02 4.045077e-03
## X210095_s_at -0.0106436916 -1.561429e-02 -1.592994e-03 5.739969e-03
## X210481_s_at 0.0470931220 -1.474796e-02 3.171028e-02 -2.181059e-02
## X210909_x_at 0.0036186980 2.010470e-04 -1.663230e-02 6.439423e-03
## X211023_at -0.0055681539 6.798898e-03 -1.953444e-04 2.358617e-03
## X211378_x_at 0.0029017829 -1.131511e-02 5.908056e-03 1.648773e-02
## X211628_x_at 0.0030893445 1.817148e-02 4.941122e-03 -2.834477e-03
## X211699_x_at 0.0123746025 -6.440765e-03 -5.314704e-03 5.224617e-03
## X211745_x_at 0.0057493664 -7.023981e-03 -4.603689e-03 5.176270e-03
## X211765_x_at 0.0001269485 -1.630760e-03 -1.075190e-02 9.690781e-03
## X211978_x_at 0.0079516650 -1.082539e-02 -1.297158e-03 -7.526042e-03
## X212149_at 0.0222416325 -5.460177e-03 1.044618e-03 -6.108471e-03
## X212551_at -0.0089505638 1.038868e-02 -9.002426e-03 -1.746206e-02
## X212554_at -0.0059861448 -3.100162e-02 -1.278934e-03 3.610730e-02
## X212661_x_at -0.0014696566 1.180382e-02 5.330703e-03 -8.549577e-03
## X213068_at -0.0099082476 -5.523948e-03 5.974364e-03 -7.533186e-03
## X213629_x_at -0.0171638350 -2.681205e-03 -1.365916e-04 3.136171e-03
## X214414_x_at -0.0116655129 5.026468e-03 1.374031e-02 1.239544e-02
## X214421_x_at 0.0004328135 9.075244e-03 -1.313057e-04 -6.434815e-03
## X214710_s_at 0.0065844765 -5.941748e-02 -4.092944e-02 -5.192558e-02
## X215138_s_at -0.0018752306 5.094269e-03 -1.692585e-03 -4.407558e-03
## X215330_at 0.0074678591 6.946892e-03 2.443737e-03 -7.638534e-03
## X215768_at -0.0031673881 -1.946379e-03 -7.221403e-04 -3.780741e-03
## X216025_x_at 0.0093442903 7.423499e-04 3.144396e-03 -3.638502e-03
## X216661_x_at 0.0077612047 -3.515304e-03 -3.878375e-03 -7.216219e-03
## X216782_at -0.0068419533 -1.299174e-03 7.537584e-04 3.333291e-03
## X217165_x_at 0.0001901202 8.744577e-05 -8.191009e-04 6.405983e-03
## X217319_x_at -0.0103735390 -8.069817e-03 -2.374298e-03 1.333060e-02
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## X217521_at -0.0092730115 3.124695e-02 -1.148567e-02 5.755728e-03
## X218002_s_at -0.0467530638 -5.452178e-03 1.095591e-02 6.351954e-03
## X218061_at -0.0176090555 -2.610828e-03 -1.028297e-02 -8.276071e-03
## X219485_s_at 0.0179562663 1.717815e-02 6.584896e-05 1.572069e-02
## X219787_s_at -0.0072020019 2.848171e-02 2.027006e-02 -1.446994e-02
## X220017_x_at 0.0002682961 1.547365e-03 4.305450e-03 -1.617477e-03
## X220114_s_at 0.0036687164 7.929326e-03 -2.711162e-02 2.800760e-02
## X220116_at -0.0179379283 7.728979e-03 2.898587e-03 -5.984082e-03
## X220148_at 0.0265811022 1.138093e-02 1.475535e-02 -9.488720e-04
## X220491_at -0.0032679469 8.731920e-03 -3.412255e-03 -9.724707e-03
## X220496_at -0.0119519743 1.628956e-02 3.401639e-03 9.935565e-03
## X36829_at 0.0129123099 -3.301766e-02 -2.703742e-02 6.434378e-02
## Dim.91 Dim.92 Dim.93 Dim.94
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## X200734_s_at 2.555461e-03 1.797831e-03 3.540811e-03 -0.0003615578
## X200882_s_at -3.852520e-03 -4.889054e-03 8.302379e-03 0.0007449761
## X200910_at -1.066360e-02 2.721050e-02 1.579470e-02 -0.0081024679
## X200954_at 5.530054e-03 -2.774969e-03 1.527382e-03 -0.0041635597
## X201128_s_at -1.104657e-02 -7.103736e-03 3.166527e-03 -0.0009550271
## X201184_s_at 2.118496e-03 3.575565e-03 -1.022328e-02 0.0011428324
## X201293_x_at -1.223627e-02 1.481811e-03 2.302381e-04 -0.0077117672
## X201398_s_at 4.031240e-03 3.431682e-03 4.450785e-03 -0.0021597982
## X201441_at 1.140548e-02 3.893199e-03 3.434950e-03 0.0043323292
## X201453_x_at -1.358833e-02 5.745012e-03 4.268732e-03 0.0069624152
## X201516_at 7.871679e-04 -4.340298e-03 5.591111e-03 0.0016582725
## X201527_at 5.734732e-03 -6.065229e-03 -5.372548e-03 0.0004794351
## X201531_at 8.881176e-03 9.624854e-04 3.980477e-03 -0.0007967767
## X201577_at 6.718659e-03 -1.369548e-03 -2.291244e-03 -0.0054118343
## X201584_s_at 7.544659e-03 -9.624627e-03 8.564585e-03 -0.0005620635
## X201656_at -7.493057e-03 4.710042e-04 8.401120e-03 0.0012634208
## X202541_at 6.423345e-03 5.593892e-03 2.927118e-03 0.0023991036
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## X202940_at 1.666869e-03 1.023379e-03 -1.452563e-03 0.0022365088
## X202963_at -2.547284e-03 -2.957337e-03 2.630072e-03 -0.0057216947
## X203316_s_at 1.364202e-03 -2.384741e-02 -1.742869e-02 0.0125167473
## X203554_x_at -3.749454e-02 2.824796e-02 -6.068143e-02 -0.0027024363
## X203755_at -1.921405e-02 9.617077e-04 8.872842e-03 0.0079674980
## X204018_x_at -4.301130e-03 2.060988e-02 3.548346e-03 -0.0034041763
## X204301_at 4.720435e-03 1.436706e-03 1.385814e-03 0.0050087690
## X204428_s_at -1.092238e-02 -4.057353e-03 -2.239803e-03 -0.0007615583
## X204641_at 2.608069e-02 1.735318e-02 -2.786977e-02 0.0140113816
## X204977_at 5.673283e-03 -4.683664e-03 4.540273e-03 0.0040355677
## X205019_s_at 2.274204e-02 7.148157e-03 -2.056065e-02 -0.0306629571
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## X205298_s_at 8.268710e-03 4.859503e-03 5.093206e-03 0.0002509192
## X205306_x_at -6.497321e-03 6.290927e-04 -2.954045e-03 -0.0040723994
## X205392_s_at -3.219824e-02 1.440352e-02 3.244708e-03 -0.0199962449
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## X205531_s_at -8.038380e-04 -9.948972e-03 4.573727e-02 -0.0062374999
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## X205740_s_at -6.489086e-03 -3.170752e-03 -3.764615e-03 -0.0024632806
## X205819_at 1.420713e-02 -4.856926e-05 -3.275762e-03 -0.0036002815
## X205858_at 9.477594e-04 -1.696360e-03 2.960824e-03 -0.0028352474
## X205866_at -6.787389e-02 -1.669205e-03 2.262020e-02 -0.0037963924
## X205890_s_at 4.531525e-03 6.899671e-03 -1.562208e-03 0.0010233864
## X205911_at -3.290389e-03 3.500626e-03 4.443034e-03 0.0059750113
## X206380_s_at -9.671536e-03 -1.435356e-03 6.581715e-03 -0.0007647761
## X206453_s_at 1.461806e-03 -8.940888e-03 1.333106e-03 0.0011455304
## X206643_at 2.322245e-02 5.373464e-02 4.565421e-03 -0.0487043454
## X206680_at -6.360090e-03 -4.001583e-03 -2.966967e-04 0.0060722236
## X207076_s_at -6.600525e-03 1.016651e-02 -2.895520e-02 0.0003588713
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## X207262_at -1.202633e-03 7.722496e-04 2.189076e-03 0.0070349841
## X207330_at -2.811750e-03 -7.739763e-04 4.348840e-03 -0.0022875179
## X207609_s_at 2.291845e-02 9.471181e-03 5.029390e-03 -0.0042749340
## X207804_s_at -1.284753e-02 -5.047430e-03 -7.965035e-04 0.0043994999
## X207828_s_at -8.246366e-03 -1.762651e-02 4.907999e-02 -0.0144797756
## X207995_s_at 2.762273e-03 -9.712516e-04 7.756686e-03 -0.0071030044
## X208079_s_at 1.308463e-02 1.391957e-03 5.111195e-03 0.0034464154
## X208147_s_at 1.338112e-02 8.486198e-05 -1.483054e-03 0.0100784226
## X208816_x_at -2.931897e-03 1.290334e-03 -3.772929e-03 0.0088120612
## X209189_at -1.051312e-02 -5.352380e-03 5.550736e-03 -0.0087028636
## X209219_at 3.411120e-03 1.253726e-02 6.589395e-03 0.0005672383
## X209335_at 2.722747e-02 9.437740e-03 -4.784777e-03 0.0035032770
## X209365_s_at -7.225386e-03 1.271791e-02 -4.472172e-02 0.0300292949
## X209447_at 3.723268e-03 -3.210159e-03 1.341543e-03 0.0023046445
## X209458_x_at -2.990868e-03 1.272223e-02 -7.538150e-03 0.0028458150
## X209821_at -3.240916e-03 -1.358142e-03 5.938447e-04 -0.0016201633
## X209825_s_at 2.879070e-03 -1.986098e-03 -1.004988e-02 0.0038480636
## X210095_s_at 1.257437e-02 1.082509e-03 1.579709e-03 -0.0017182806
## X210481_s_at -1.382192e-03 -5.671058e-03 -1.022107e-02 0.0038854884
## X210909_x_at 8.215556e-03 -4.291268e-03 -4.481212e-03 0.0053497753
## X211023_at 8.449919e-03 7.666567e-03 6.438535e-04 -0.0003629167
## X211378_x_at 1.202525e-02 3.893926e-03 1.463587e-02 0.0004540257
## X211628_x_at 4.299020e-03 -9.903724e-04 2.525158e-04 -0.0023322828
## X211699_x_at -9.673186e-03 2.460383e-02 -1.991067e-03 -0.0100371919
## X211745_x_at -1.052992e-02 -6.308026e-04 -3.005632e-03 -0.0076293350
## X211765_x_at -5.084943e-03 4.511159e-03 -1.193204e-03 -0.0014144080
## X211978_x_at 1.543641e-02 -2.515823e-02 -2.357657e-02 0.0077749158
## X212149_at -1.048288e-02 -9.450447e-04 1.109352e-03 0.0095796131
## X212551_at -6.385562e-03 4.167958e-02 2.371088e-02 0.0530655666
## X212554_at 1.335407e-02 -5.531774e-02 -3.208372e-02 -0.0718186795
## X212661_x_at -1.472696e-03 -3.398006e-03 3.190158e-03 0.0089682184
## X213068_at -6.714896e-03 -3.495208e-03 6.509689e-03 0.0066278585
## X213629_x_at 8.194871e-03 -6.984882e-03 5.421160e-03 -0.0052274919
## X214414_x_at 2.297758e-02 -5.957702e-02 -1.504698e-04 0.0131002616
## X214421_x_at 2.770566e-03 3.018331e-03 1.679056e-03 0.0008533596
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## X215138_s_at -2.109269e-03 -1.632618e-03 1.765658e-03 0.0058471042
## X215330_at 2.407917e-03 3.623204e-03 -7.016261e-04 0.0010986898
## X215768_at -2.347684e-03 1.941274e-03 -4.333251e-03 -0.0013949865
## X216025_x_at -8.755562e-04 -5.524189e-03 -1.854435e-03 -0.0007606105
## X216661_x_at -7.956239e-03 6.129798e-03 1.152860e-03 -0.0081465516
## X216782_at 3.069259e-05 -1.813028e-03 -2.902016e-04 -0.0039234459
## X217165_x_at -2.583124e-03 -2.816233e-03 -1.387867e-03 0.0016017350
## X217319_x_at -5.984360e-03 3.974829e-03 3.162394e-03 -0.0057084528
## X217414_x_at 1.070814e-02 2.087562e-03 5.956372e-03 0.0050127409
## X217521_at -2.093481e-02 -5.478649e-02 -1.496439e-02 0.0587340925
## X218002_s_at -2.325175e-02 -1.659559e-02 2.846975e-02 -0.0009996436
## X218061_at 8.056211e-04 -2.100822e-03 -6.054558e-04 0.0049124297
## X219485_s_at -7.283681e-04 4.490947e-03 -5.665550e-03 0.0083281474
## X219787_s_at 1.848662e-03 4.557771e-03 -1.180769e-02 -0.0041743132
## X220017_x_at 7.154057e-03 -1.033654e-03 -6.560610e-03 -0.0011622530
## X220114_s_at 1.963901e-02 1.257903e-03 1.731084e-02 0.0076712145
## X220116_at -2.693722e-03 -4.369009e-03 -1.899696e-03 -0.0085768782
## X220148_at 1.357299e-03 3.786374e-03 7.022221e-03 0.0085483920
## X220491_at -1.494418e-02 -3.435197e-03 -5.596833e-05 -0.0091506487
## X220496_at 2.025699e-02 -3.004237e-03 -1.696598e-02 0.0013383521
## X36829_at 2.674314e-02 1.698597e-02 1.432967e-02 0.0202444319
## Dim.95 Dim.96 Dim.97 Dim.98
## X200606_at 8.595442e-04 1.366683e-04 -1.076875e-04 -5.880602e-04
## X200734_s_at 6.018701e-04 2.218158e-03 1.760419e-03 2.313775e-04
## X200882_s_at 1.370694e-02 -2.193149e-03 1.705415e-04 -2.064640e-03
## X200910_at -4.866741e-03 -2.889244e-03 9.791476e-05 5.930284e-04
## X200954_at 2.012129e-03 -2.648441e-03 -4.515510e-04 -5.592214e-04
## X201128_s_at 7.258805e-03 -1.223165e-03 -1.051367e-03 3.079847e-03
## X201184_s_at -2.492163e-03 1.351431e-03 -7.693279e-04 8.978114e-06
## X201293_x_at 6.390036e-03 2.232663e-02 1.079822e-02 -2.285614e-02
## X201398_s_at 1.365369e-04 -1.128719e-03 2.847424e-04 6.677223e-04
## X201441_at -8.004379e-04 -3.256545e-03 4.527166e-04 1.248577e-03
## X201453_x_at 5.721597e-04 -1.755905e-03 3.323864e-03 5.317326e-04
## X201516_at 4.030200e-03 2.232440e-03 8.314671e-04 -6.671256e-04
## X201527_at -5.805533e-04 3.691585e-03 -1.094525e-03 -1.518697e-03
## X201531_at -1.750053e-03 7.231063e-04 1.224933e-03 -3.752540e-03
## X201577_at -8.179541e-03 -3.330928e-03 -3.731268e-03 -2.323621e-03
## X201584_s_at -7.625344e-04 -3.572198e-03 3.101276e-04 2.228103e-04
## X201656_at 2.287314e-03 9.459703e-04 5.101188e-04 6.682886e-04
## X202541_at -6.675951e-04 2.968021e-03 2.435101e-04 -9.681263e-05
## X202737_s_at 3.643792e-03 -2.652297e-04 -7.615813e-04 1.893673e-03
## X202861_at -5.584671e-03 5.323898e-03 -9.003197e-03 -1.859738e-03
## X202940_at 2.375168e-03 2.515986e-03 8.860188e-04 1.443689e-03
## X202963_at -8.047251e-03 -4.992572e-03 -5.498008e-04 5.576089e-06
## X203316_s_at -7.853086e-03 1.282600e-02 -5.046650e-04 -1.258033e-03
## X203554_x_at -8.760608e-03 3.375081e-03 1.727540e-05 2.758138e-03
## X203755_at -3.329273e-03 -2.413902e-03 -1.313116e-03 -1.181916e-03
## X204018_x_at 1.778395e-02 2.976610e-03 6.226941e-03 1.817623e-02
## X204301_at 3.910073e-04 -1.774943e-03 -7.752625e-05 -6.047105e-05
## X204428_s_at -8.580213e-03 2.998175e-03 -2.226900e-03 4.689082e-03
## X204641_at 1.406635e-03 -3.800133e-04 1.462027e-03 -8.054086e-04
## X204977_at 6.535202e-03 -2.176723e-03 1.786584e-03 -2.598128e-04
## X205019_s_at -6.475146e-03 -9.129413e-04 -3.235484e-03 -7.100480e-04
## X205086_s_at 6.403981e-04 7.684503e-04 -7.029549e-04 4.194737e-04
## X205298_s_at -3.288131e-04 -7.080099e-04 2.781819e-04 -1.075466e-03
## X205306_x_at 3.378231e-04 -2.546474e-03 1.491446e-03 1.626714e-03
## X205392_s_at -6.888664e-03 -3.236493e-03 -4.178972e-03 -3.997186e-03
## X205440_s_at 2.753910e-04 -2.250190e-03 1.951876e-03 2.760399e-04
## X205531_s_at 1.299845e-02 -5.322214e-03 3.483405e-03 2.523918e-03
## X205554_s_at 1.240238e-02 5.788730e-03 2.116393e-03 -2.003862e-03
## X205740_s_at -1.678935e-03 1.026448e-03 -5.942877e-04 -2.538204e-03
## X205819_at -2.277378e-03 1.839834e-03 7.261186e-05 9.537865e-04
## X205858_at -2.119359e-04 7.406269e-04 7.125352e-05 -4.032418e-04
## X205866_at -2.195735e-02 -5.212621e-03 2.684379e-03 1.818048e-03
## X205890_s_at 8.308486e-04 -3.515835e-03 1.873620e-04 1.614118e-03
## X205911_at 3.496945e-03 1.375824e-03 1.990439e-03 1.260567e-03
## X206380_s_at 2.251782e-03 -1.406682e-03 1.112154e-03 -2.611550e-03
## X206453_s_at 1.146449e-03 -9.182646e-05 1.667980e-03 -6.829676e-04
## X206643_at -3.168322e-02 -4.010886e-03 3.233340e-03 5.185250e-04
## X206680_at 1.038539e-03 1.136212e-03 3.085709e-04 -1.265118e-03
## X207076_s_at -8.067371e-03 7.331251e-03 -2.873018e-03 -3.076277e-03
## X207218_at -1.070775e-03 9.493896e-04 2.761012e-04 -7.675493e-04
## X207262_at 6.358789e-03 -4.287418e-03 -2.316132e-03 1.406533e-04
## X207330_at -2.188911e-04 -6.300823e-04 9.271790e-04 8.459067e-04
## X207609_s_at 2.210536e-03 9.794146e-04 -5.792295e-04 3.286019e-03
## X207804_s_at -1.640629e-05 2.505300e-03 3.302628e-03 1.576423e-03
## X207828_s_at 1.221035e-03 -5.275646e-03 -2.713953e-03 2.310878e-03
## X207995_s_at -4.049735e-03 -3.216732e-03 -2.100270e-03 4.074730e-03
## X208079_s_at 1.936789e-04 2.792921e-03 -1.085858e-03 -1.847402e-03
## X208147_s_at 6.307356e-03 1.025508e-03 -2.371790e-03 -5.893377e-05
## X208816_x_at -4.391580e-03 2.790496e-03 -1.256712e-03 -2.824196e-04
## X209189_at 2.432844e-03 -2.142337e-03 -8.053611e-04 1.567170e-03
## X209219_at -4.945736e-03 -3.495893e-03 -9.097063e-04 -1.068741e-03
## X209335_at 3.536125e-03 4.582910e-03 1.145903e-03 8.156274e-04
## X209365_s_at 2.870868e-03 1.450553e-03 -3.778639e-04 4.390741e-04
## X209447_at 1.944237e-03 -5.946576e-04 -3.993968e-03 6.761458e-04
## X209458_x_at 3.241534e-02 8.194755e-03 -6.273054e-03 -1.294189e-03
## X209821_at 7.512849e-04 6.478073e-04 -2.730839e-03 -2.562699e-04
## X209825_s_at -2.611957e-03 -5.168470e-04 -3.553989e-04 -1.863699e-03
## X210095_s_at 1.018122e-03 3.195201e-03 -1.554122e-03 -1.203090e-03
## X210481_s_at 2.874142e-05 6.525589e-04 7.275184e-04 -3.702471e-03
## X210909_x_at -6.253313e-03 1.555473e-03 1.982296e-04 -9.289854e-04
## X211023_at -3.695988e-05 -2.469570e-03 6.449838e-04 3.640443e-04
## X211378_x_at -1.798754e-03 2.254922e-02 -6.360659e-02 5.667287e-03
## X211628_x_at 5.801522e-03 9.850319e-05 -2.886492e-03 1.192362e-03
## X211699_x_at 3.707020e-02 -2.801568e-02 -6.487417e-03 -2.568318e-02
## X211745_x_at 2.442752e-03 -6.168508e-03 -9.162979e-03 9.927857e-04
## X211765_x_at 1.547881e-03 2.741681e-02 1.198068e-02 -1.833538e-02
## X211978_x_at -8.633998e-03 -7.837587e-02 -5.445610e-03 1.708685e-02
## X212149_at -6.150769e-03 2.453988e-03 1.367685e-03 -1.169377e-03
## X212551_at -2.069503e-02 -4.744869e-03 -2.590899e-03 -3.413657e-03
## X212554_at 1.885139e-02 7.669204e-03 5.057660e-03 7.478445e-03
## X212661_x_at 6.237026e-03 5.350235e-03 4.440697e-02 2.128191e-02
## X213068_at 3.052827e-04 -5.299602e-04 7.178829e-04 3.078893e-04
## X213629_x_at 4.016783e-03 -1.282301e-02 1.365273e-02 -3.459213e-02
## X214414_x_at -7.258606e-02 3.839481e-03 6.643418e-05 -2.074824e-02
## X214421_x_at 1.583828e-03 -4.613180e-03 1.818163e-03 -1.115330e-02
## X214710_s_at 1.281498e-02 6.124362e-03 3.795872e-04 9.326933e-04
## X215138_s_at -4.010867e-04 -1.555563e-03 -1.429092e-03 1.669616e-03
## X215330_at -7.468125e-04 -4.186067e-04 -8.015572e-04 -3.895246e-05
## X215768_at 1.285387e-03 -7.395123e-04 8.916552e-04 -9.681237e-04
## X216025_x_at 6.493306e-03 6.161385e-05 -1.112422e-02 -2.218666e-04
## X216661_x_at -2.109066e-03 5.759137e-03 1.034010e-02 1.486511e-02
## X216782_at 1.762281e-03 1.625377e-03 -1.276886e-03 -6.571417e-04
## X217165_x_at -5.515440e-03 9.109720e-03 -1.458489e-02 3.545828e-02
## X217319_x_at -5.937114e-03 -3.298504e-03 -1.102004e-03 -8.800702e-04
## X217414_x_at -1.993394e-02 1.942326e-02 1.542155e-02 2.834932e-02
## X217521_at 3.150221e-02 8.193626e-03 -3.248592e-03 1.544188e-03
## X218002_s_at 1.194745e-03 -4.315572e-03 1.678388e-04 2.920974e-03
## X218061_at -1.184535e-03 3.503528e-05 -8.073171e-04 -8.287270e-04
## X219485_s_at -4.732349e-03 -4.273280e-03 -1.260460e-03 2.648990e-04
## X219787_s_at 2.458305e-04 1.333089e-03 3.586798e-04 -1.816058e-03
## X220017_x_at -5.688870e-03 3.150475e-04 -4.377854e-04 -2.500299e-03
## X220114_s_at 5.111789e-03 -2.620029e-03 -3.488071e-03 7.701019e-04
## X220116_at 1.914822e-03 1.779768e-04 -8.915946e-04 1.044165e-03
## X220148_at -6.938875e-05 -3.929014e-04 -1.155984e-03 -5.592692e-03
## X220491_at 1.968975e-03 -2.046394e-03 1.339671e-04 -1.310715e-03
## X220496_at 3.682892e-03 2.621191e-03 8.042619e-04 -1.435260e-04
## X36829_at -2.391931e-03 -3.543799e-03 1.000224e-02 3.138943e-03
## Dim.99 Dim.100 Dim.101 Dim.102
## X200606_at -1.705418e-03 -2.701619e-04 6.851905e-04 3.708230e-06
## X200734_s_at -5.654381e-04 -9.940030e-04 -5.862575e-04 1.428448e-03
## X200882_s_at 5.363021e-04 3.671264e-04 1.711198e-03 3.920685e-04
## X200910_at -2.980447e-03 -2.329062e-03 -9.937209e-04 9.630387e-04
## X200954_at -5.033266e-04 1.420423e-03 -5.544958e-04 -1.121377e-03
## X201128_s_at 1.050564e-03 2.115575e-05 -2.022618e-04 -6.590392e-04
## X201184_s_at -5.861960e-04 1.113344e-03 1.058608e-04 -3.210025e-04
## X201293_x_at 1.914550e-02 -1.783796e-03 -2.348405e-02 5.225400e-03
## X201398_s_at -5.342899e-04 5.067112e-05 3.525766e-04 -2.351463e-04
## X201441_at 2.855107e-03 -9.667164e-04 -1.414487e-03 8.464900e-04
## X201453_x_at -2.299251e-03 6.090823e-04 -4.019977e-05 2.116238e-04
## X201516_at -6.948929e-04 1.391687e-04 6.716326e-05 3.655302e-04
## X201527_at -3.726560e-04 -3.932534e-05 8.600859e-04 -5.584478e-04
## X201531_at -3.232569e-03 1.062410e-03 -7.164326e-04 -1.268279e-03
## X201577_at 1.108863e-03 3.231213e-04 1.089530e-03 -7.106966e-04
## X201584_s_at 2.705901e-03 1.694155e-03 -1.475708e-03 2.141951e-03
## X201656_at -1.767648e-03 -3.228015e-05 -8.864876e-04 6.756550e-04
## X202541_at 1.413619e-03 -2.985415e-04 -3.749795e-04 6.382765e-04
## X202737_s_at -7.330748e-04 -1.663449e-04 4.429625e-06 -1.895536e-03
## X202861_at -1.105387e-03 9.210796e-04 5.282045e-04 7.826795e-04
## X202940_at 5.792483e-04 6.799597e-04 5.623638e-05 -9.675645e-05
## X202963_at 1.277101e-04 9.381302e-04 8.194637e-04 1.826189e-04
## X203316_s_at -1.533719e-03 8.674050e-04 3.025749e-03 -1.741532e-03
## X203554_x_at -4.374282e-03 1.113406e-03 1.537438e-03 8.425814e-04
## X203755_at 1.200916e-03 -1.044034e-03 1.178119e-03 -7.419605e-04
## X204018_x_at -2.668681e-02 -1.577875e-02 -8.517491e-03 -3.033097e-02
## X204301_at -7.997827e-05 7.532426e-04 -6.842148e-04 6.858270e-04
## X204428_s_at -1.424133e-03 -8.484984e-04 5.268986e-04 1.239259e-03
## X204641_at 9.409846e-04 2.349142e-03 1.071098e-03 9.937782e-04
## X204977_at 3.196223e-04 -1.902207e-04 -2.177892e-04 7.699761e-04
## X205019_s_at 5.949795e-04 -4.709458e-05 2.515340e-03 -2.219397e-04
## X205086_s_at 6.275484e-04 -1.198131e-03 -4.173292e-04 -1.067670e-03
## X205298_s_at 5.745869e-04 -1.956951e-04 4.834271e-04 5.397072e-04
## X205306_x_at -8.263586e-05 -9.851060e-06 1.009546e-03 -5.843309e-04
## X205392_s_at -3.709309e-03 5.433641e-03 2.339779e-03 4.847986e-04
## X205440_s_at -2.246894e-03 4.712000e-04 -3.255456e-04 -4.207451e-04
## X205531_s_at 2.966894e-03 5.589118e-05 -1.898683e-03 7.284672e-04
## X205554_s_at 3.773964e-03 -2.850742e-03 -1.852841e-03 2.888615e-03
## X205740_s_at -5.707467e-04 1.380861e-03 3.958857e-04 3.098602e-04
## X205819_at 1.512870e-03 -1.237264e-03 -5.788921e-05 -4.236949e-04
## X205858_at 1.843162e-03 -1.021894e-03 -3.972168e-04 2.800762e-04
## X205866_at -6.135768e-03 2.761050e-03 -4.643590e-04 -1.118491e-03
## X205890_s_at 2.432480e-04 6.883561e-04 4.418155e-05 -3.357650e-04
## X205911_at -9.338209e-04 -4.042986e-04 -9.226277e-04 -1.070938e-03
## X206380_s_at -1.929215e-03 9.082841e-04 1.009481e-05 -4.380496e-04
## X206453_s_at -9.543427e-04 -2.691147e-04 -7.764343e-04 -1.316162e-03
## X206643_at 2.785443e-03 -1.714735e-03 3.032149e-03 7.111821e-04
## X206680_at 1.172847e-03 6.163449e-04 -1.022362e-03 1.590275e-03
## X207076_s_at -2.608476e-03 3.006745e-04 1.431349e-03 -1.044907e-03
## X207218_at 3.407270e-03 5.884722e-04 4.005989e-04 -5.399656e-04
## X207262_at -1.705206e-03 -8.539855e-04 8.041969e-04 1.464349e-03
## X207330_at -3.825501e-04 6.850189e-04 -3.847311e-04 -2.036658e-04
## X207609_s_at -4.460294e-04 -3.880907e-04 2.481335e-03 -3.108211e-05
## X207804_s_at 6.816541e-04 2.442725e-04 -6.412705e-04 2.388982e-04
## X207828_s_at 3.212587e-03 -1.902773e-03 -2.472955e-03 1.096080e-03
## X207995_s_at 2.362334e-03 -1.045344e-03 1.645508e-03 5.079695e-04
## X208079_s_at -3.027182e-04 -1.221222e-03 -4.240087e-04 5.990497e-04
## X208147_s_at 3.240856e-03 2.619433e-04 1.282233e-03 1.956801e-03
## X208816_x_at 2.837513e-03 -8.397579e-04 4.057054e-04 7.248754e-04
## X209189_at 1.971517e-03 3.998474e-04 8.260127e-04 -7.038962e-04
## X209219_at 4.713526e-04 -9.055516e-05 -1.654993e-03 1.661811e-03
## X209335_at -9.962482e-04 -3.058976e-03 1.052922e-03 1.103584e-03
## X209365_s_at 2.043901e-03 1.621631e-03 1.381642e-03 -1.266315e-03
## X209447_at 2.731288e-04 1.191472e-03 -1.423825e-03 -1.030410e-03
## X209458_x_at -6.351172e-03 -7.730511e-03 3.956265e-03 2.483763e-02
## X209821_at -9.260711e-05 -1.006740e-03 1.029619e-03 2.671189e-04
## X209825_s_at 1.653681e-03 1.416463e-03 -1.589109e-03 4.334089e-04
## X210095_s_at 3.398648e-03 1.136336e-03 2.906600e-04 1.377704e-04
## X210481_s_at -1.324540e-03 -3.844825e-04 2.211798e-04 -8.149216e-04
## X210909_x_at -1.981461e-04 1.660744e-03 8.846604e-04 1.030864e-04
## X211023_at 6.846060e-04 -5.083766e-05 -1.423793e-04 3.902707e-04
## X211378_x_at -2.311559e-02 1.297044e-02 1.448163e-02 3.824404e-04
## X211628_x_at -9.243291e-04 -3.675048e-04 -5.682266e-04 -7.081515e-04
## X211699_x_at 2.953325e-02 3.612158e-02 1.010734e-02 -8.526226e-03
## X211745_x_at 9.680946e-03 -4.775354e-02 9.851919e-03 8.692389e-03
## X211765_x_at 1.169344e-02 -1.343048e-02 -1.636835e-02 -7.112268e-03
## X211978_x_at -3.892070e-03 -3.209013e-03 -1.569491e-02 4.474866e-03
## X212149_at -1.588227e-03 3.734336e-04 -1.200406e-04 6.531842e-04
## X212551_at 3.782513e-03 -1.593999e-03 -7.350387e-04 7.629508e-04
## X212554_at -3.184977e-03 3.843335e-03 -6.847499e-04 -1.658026e-03
## X212661_x_at -3.103240e-03 6.753371e-03 4.285940e-02 -3.731572e-03
## X213068_at -4.875043e-04 -8.965656e-04 -8.339399e-04 -1.287846e-04
## X213629_x_at -3.751132e-02 1.606167e-03 8.565420e-04 7.557586e-03
## X214414_x_at 8.807730e-03 2.064289e-03 1.201421e-02 -2.101304e-03
## X214421_x_at 4.512984e-03 2.143165e-03 7.169328e-03 -8.955544e-03
## X214710_s_at 2.289809e-03 -5.858712e-04 2.445460e-04 -2.355325e-03
## X215138_s_at 4.777926e-04 -9.714681e-05 4.948339e-04 5.526427e-05
## X215330_at 9.962555e-05 -7.742599e-04 -3.220459e-04 6.752536e-04
## X215768_at 7.661471e-05 -1.864724e-04 -3.525975e-04 2.731508e-04
## X216025_x_at -1.033406e-03 5.209125e-04 -3.911360e-04 2.773131e-03
## X216661_x_at 2.437451e-03 1.417812e-03 1.561776e-04 3.115079e-02
## X216782_at 1.341927e-04 1.239031e-03 -6.836560e-04 -2.080336e-04
## X217165_x_at 3.961075e-02 -7.442200e-04 -1.322038e-03 -7.640256e-03
## X217319_x_at 1.233973e-03 4.384668e-04 -1.425702e-03 -1.334732e-04
## X217414_x_at -1.415297e-02 3.308075e-02 -2.639602e-02 8.049108e-03
## X217521_at -2.224830e-03 2.394207e-03 -2.669669e-03 -1.141402e-03
## X218002_s_at 1.723326e-03 -5.249222e-04 -1.848685e-03 6.322204e-04
## X218061_at -1.219281e-03 -1.292474e-03 4.696438e-04 -5.594653e-04
## X219485_s_at 2.215253e-04 4.224509e-04 -1.051182e-03 -5.107242e-04
## X219787_s_at -2.196174e-03 1.700192e-03 -1.084762e-03 6.067352e-04
## X220017_x_at -6.310050e-03 -4.253194e-03 -6.801825e-03 -2.449426e-02
## X220114_s_at -5.068857e-04 -2.125132e-03 -1.654552e-03 -4.849182e-04
## X220116_at 2.928654e-03 1.427255e-03 9.779265e-05 -2.003703e-04
## X220148_at -3.814434e-03 -8.384102e-06 -5.174437e-04 2.381720e-04
## X220491_at -1.402906e-03 9.265816e-04 2.481315e-05 -6.567728e-04
## X220496_at 1.103842e-03 -7.480014e-04 -2.686357e-03 -7.777186e-04
## X36829_at -1.165314e-03 -1.947989e-03 -1.700745e-04 -8.741171e-04
## Dim.103 Dim.104 Dim.105 Dim.106
## X200606_at 5.336948e-04 1.577187e-04 7.434081e-04 -1.367006e-05
## X200734_s_at -1.761333e-04 -2.758118e-04 -3.791550e-04 -3.852127e-05
## X200882_s_at 1.257387e-03 4.878089e-04 1.199937e-03 -3.450080e-04
## X200910_at -3.073852e-03 -1.161480e-03 -6.498230e-04 8.553500e-04
## X200954_at -1.114219e-03 4.228460e-05 2.020469e-04 -2.159813e-04
## X201128_s_at 5.200702e-04 7.798584e-04 1.882024e-04 9.222688e-05
## X201184_s_at 4.055429e-04 -4.295038e-04 -2.782583e-04 -1.811166e-04
## X201293_x_at 1.256013e-02 -1.490696e-02 2.991775e-02 2.256527e-03
## X201398_s_at -1.350331e-03 -9.006777e-04 -1.837476e-04 -3.336411e-04
## X201441_at 1.574616e-04 -6.285501e-04 -1.415094e-04 6.876798e-04
## X201453_x_at -1.393058e-04 -7.207485e-04 -6.887163e-04 -2.811759e-04
## X201516_at 3.353711e-04 -5.103646e-05 -5.787588e-04 4.359665e-04
## X201527_at 3.895654e-05 4.075980e-04 9.472850e-04 7.146017e-04
## X201531_at -6.194918e-04 -7.708364e-04 -7.444739e-04 -2.438158e-04
## X201577_at -5.894101e-04 -6.247410e-04 8.722115e-04 -5.830019e-04
## X201584_s_at 1.709688e-03 9.560186e-04 -4.555749e-04 -2.557334e-04
## X201656_at -5.988324e-04 -8.708517e-04 -6.064890e-04 3.780812e-04
## X202541_at -3.832226e-05 -7.667237e-04 8.492444e-05 -2.817765e-05
## X202737_s_at -1.437464e-03 1.324903e-03 3.768409e-04 3.047198e-04
## X202861_at -1.129374e-03 1.206422e-03 -2.404609e-03 1.038813e-03
## X202940_at 4.999753e-04 2.980305e-04 -3.959179e-04 2.504335e-04
## X202963_at -7.727552e-04 3.442454e-04 -4.053103e-04 2.094486e-04
## X203316_s_at 2.309136e-03 1.398747e-03 -4.551728e-04 -1.282502e-03
## X203554_x_at 9.518455e-04 4.575233e-04 6.764442e-04 -1.348112e-03
## X203755_at -1.010689e-03 2.963205e-04 1.939001e-04 -9.180399e-05
## X204018_x_at 2.270489e-02 -1.625770e-02 -4.453572e-03 -8.726400e-03
## X204301_at 1.088344e-04 3.033701e-04 -1.242416e-04 -1.410196e-05
## X204428_s_at -2.899981e-04 -1.182739e-03 -8.408277e-04 -5.008344e-04
## X204641_at 1.179472e-03 -9.225012e-04 8.974762e-04 4.529969e-05
## X204977_at 4.979722e-04 9.590115e-04 -1.727721e-05 2.115922e-04
## X205019_s_at 4.881487e-04 8.370655e-05 1.909960e-03 -5.697396e-04
## X205086_s_at -1.399555e-04 -4.151225e-05 2.777047e-04 1.639469e-05
## X205298_s_at 5.726590e-04 1.161797e-03 1.808681e-04 1.930836e-06
## X205306_x_at 6.076452e-04 1.730630e-04 -2.900828e-04 8.620661e-05
## X205392_s_at 2.182680e-04 9.762655e-04 -8.636777e-04 2.659267e-04
## X205440_s_at -1.398664e-03 6.487078e-04 9.015470e-04 -2.656288e-04
## X205531_s_at -1.176020e-05 8.229984e-04 -1.704602e-03 7.219361e-04
## X205554_s_at 1.805162e-03 2.187935e-03 -4.860094e-05 -2.352170e-04
## X205740_s_at 6.210674e-04 4.480593e-05 -6.848679e-04 -1.881804e-04
## X205819_at 7.718916e-04 -7.702330e-04 1.814102e-04 -7.133801e-04
## X205858_at 1.503435e-04 -3.495388e-04 -4.748533e-04 3.573334e-04
## X205866_at -3.884657e-03 -2.973382e-03 4.126561e-04 1.342479e-03
## X205890_s_at -8.065293e-05 -8.343802e-04 4.287435e-04 -1.937429e-04
## X205911_at 2.611586e-04 -3.540485e-04 -8.375225e-04 2.000288e-04
## X206380_s_at 7.668357e-05 1.145878e-03 4.834045e-04 2.061751e-04
## X206453_s_at -3.609175e-04 -1.089690e-03 -1.025855e-03 5.719373e-06
## X206643_at -3.595453e-03 -3.631056e-03 2.714646e-04 -6.409658e-04
## X206680_at 4.383699e-05 -4.431460e-04 -1.615254e-03 5.045795e-04
## X207076_s_at 1.076173e-03 -1.417483e-04 1.060165e-04 1.878989e-04
## X207218_at 1.091508e-03 1.352048e-03 7.579996e-04 -4.251203e-04
## X207262_at 1.856494e-03 -4.038301e-04 1.916656e-04 8.675839e-04
## X207330_at -3.724274e-04 -3.331790e-04 -1.864908e-04 -3.198396e-05
## X207609_s_at -1.014726e-03 7.795723e-04 7.081041e-04 3.728947e-04
## X207804_s_at 3.124667e-04 3.954045e-04 2.569449e-04 2.078377e-04
## X207828_s_at -1.760493e-03 -3.157156e-04 -1.874507e-03 9.446300e-04
## X207995_s_at 2.793863e-04 -1.508500e-03 1.281651e-03 -5.378108e-04
## X208079_s_at 2.281836e-04 8.313714e-04 7.173106e-04 3.787052e-04
## X208147_s_at 9.986517e-04 8.674554e-05 1.308438e-04 1.052866e-05
## X208816_x_at 6.604256e-04 4.213858e-04 -5.988166e-04 2.083134e-04
## X209189_at -1.419798e-04 7.093529e-05 2.158393e-04 8.006292e-04
## X209219_at -5.146953e-04 -1.434557e-04 -7.247953e-04 1.926313e-04
## X209335_at 1.432227e-03 4.181712e-04 2.233562e-05 2.353056e-04
## X209365_s_at -2.947615e-04 1.550104e-03 1.709788e-03 -1.495195e-03
## X209447_at 1.567909e-04 -9.613173e-04 -9.792976e-06 -4.945364e-05
## X209458_x_at -2.499165e-02 -2.690301e-02 -7.426173e-03 1.174595e-02
## X209821_at -2.485399e-04 -1.657318e-04 -2.990208e-04 3.615477e-04
## X209825_s_at -2.569182e-04 4.564171e-04 2.312809e-04 3.003277e-05
## X210095_s_at 1.170460e-03 5.557689e-04 -7.534583e-04 5.405571e-04
## X210481_s_at -9.996481e-04 9.072725e-04 -2.261573e-04 1.560061e-04
## X210909_x_at 4.098291e-04 -5.900757e-05 4.730157e-04 7.619346e-04
## X211023_at 8.154960e-04 5.526229e-04 -3.745498e-04 2.489839e-05
## X211378_x_at 6.369424e-03 5.479933e-03 1.424648e-03 1.348033e-03
## X211628_x_at 7.205527e-04 -4.405491e-04 -9.052282e-05 1.807982e-05
## X211699_x_at 9.223718e-03 7.855202e-03 -4.603242e-03 7.952115e-04
## X211745_x_at 9.113774e-05 2.817118e-02 1.397512e-02 -1.290198e-03
## X211765_x_at -1.076115e-02 1.236574e-02 -3.332576e-02 -5.512205e-03
## X211978_x_at -2.447905e-03 -2.917279e-03 -3.047086e-03 3.216936e-04
## X212149_at 6.364796e-04 -4.401680e-04 6.640357e-05 4.671423e-04
## X212551_at 4.259031e-04 -1.910571e-04 5.004735e-04 -1.840337e-04
## X212554_at -8.475853e-04 3.391559e-04 2.458472e-04 -7.017577e-04
## X212661_x_at -4.937752e-03 8.082942e-05 4.994527e-03 1.349308e-03
## X213068_at 6.110193e-04 -1.653730e-04 1.203894e-04 -4.043937e-05
## X213629_x_at 2.411858e-03 6.753965e-03 1.792781e-03 -9.020826e-04
## X214414_x_at 5.980726e-03 -1.289139e-02 -5.137679e-03 -3.174818e-04
## X214421_x_at -1.067175e-02 4.469516e-03 6.295036e-03 -1.042788e-02
## X214710_s_at 1.531414e-05 -3.788734e-04 2.044731e-04 1.320396e-04
## X215138_s_at 2.549238e-04 7.516878e-05 -4.504528e-04 -1.138128e-04
## X215330_at -4.120522e-04 6.360807e-05 -9.298135e-05 -2.492296e-04
## X215768_at 5.378902e-04 2.084810e-04 -3.357620e-04 -3.893162e-04
## X216025_x_at -1.448315e-02 -1.043067e-02 4.336865e-03 -2.358913e-02
## X216661_x_at 3.421334e-02 2.455403e-03 -1.454714e-02 4.392609e-03
## X216782_at -5.368344e-04 3.219042e-04 -4.271041e-04 -2.878021e-04
## X217165_x_at -2.248158e-03 -5.720189e-03 -1.331125e-03 7.567808e-04
## X217319_x_at -1.668907e-03 -5.342098e-04 7.374550e-04 -1.111986e-04
## X217414_x_at -1.255849e-02 1.984263e-02 8.341442e-03 -2.250594e-03
## X217521_at 3.057466e-03 3.374788e-03 6.367465e-04 3.934679e-04
## X218002_s_at -6.359346e-04 -6.606338e-04 3.748957e-04 -8.300519e-04
## X218061_at 8.067626e-04 -2.557123e-05 -5.053938e-05 -6.555257e-05
## X219485_s_at 2.677637e-04 -5.244513e-04 -4.700942e-04 4.100422e-04
## X219787_s_at 9.901254e-04 -5.734364e-05 -1.689153e-03 5.518221e-05
## X220017_x_at -7.386342e-03 4.706313e-03 2.553280e-03 2.974579e-02
## X220114_s_at -6.329372e-04 -7.382797e-04 4.841749e-05 5.924847e-04
## X220116_at -8.340244e-05 2.586902e-04 -4.918823e-04 6.239740e-05
## X220148_at -1.736177e-03 3.095788e-04 8.041672e-04 -2.878444e-04
## X220491_at 1.307563e-04 -7.176070e-05 -6.518989e-04 -1.315082e-04
## X220496_at 5.712859e-04 -2.517262e-04 -1.885677e-03 -7.047078e-04
## X36829_at 1.612156e-03 -1.820441e-03 1.739888e-03 -1.374872e-03
## Dim.107
## X200606_at -1.708226e-04
## X200734_s_at -3.043958e-04
## X200882_s_at 3.990180e-05
## X200910_at 5.229074e-04
## X200954_at 1.116427e-04
## X201128_s_at 3.448233e-04
## X201184_s_at -1.204959e-04
## X201293_x_at -5.071154e-04
## X201398_s_at -2.261693e-04
## X201441_at -1.363407e-04
## X201453_x_at -6.158029e-04
## X201516_at -5.285592e-04
## X201527_at 7.289684e-04
## X201531_at 4.924670e-04
## X201577_at 7.266130e-04
## X201584_s_at 9.755644e-05
## X201656_at -3.222228e-04
## X202541_at -3.014447e-05
## X202737_s_at -9.206263e-05
## X202861_at 4.248799e-04
## X202940_at 1.166053e-05
## X202963_at -7.220558e-04
## X203316_s_at 1.060504e-05
## X203554_x_at -8.116288e-04
## X203755_at 4.797468e-04
## X204018_x_at -2.029863e-03
## X204301_at 1.708947e-05
## X204428_s_at -2.995789e-04
## X204641_at 1.063335e-04
## X204977_at -5.497303e-04
## X205019_s_at 7.145346e-04
## X205086_s_at -1.258323e-04
## X205298_s_at 1.468943e-04
## X205306_x_at -1.238287e-05
## X205392_s_at -5.174741e-05
## X205440_s_at -1.039906e-04
## X205531_s_at 5.813719e-05
## X205554_s_at 5.917659e-04
## X205740_s_at -8.171338e-05
## X205819_at -4.326031e-04
## X205858_at 3.120931e-04
## X205866_at -4.891949e-04
## X205890_s_at 3.644635e-04
## X205911_at -3.387970e-04
## X206380_s_at -1.509288e-04
## X206453_s_at 2.467602e-04
## X206643_at 1.916498e-04
## X206680_at 1.783457e-04
## X207076_s_at 2.537088e-04
## X207218_at 1.551510e-04
## X207262_at 1.572783e-04
## X207330_at 1.042512e-04
## X207609_s_at -1.613081e-04
## X207804_s_at -4.555944e-04
## X207828_s_at -1.686218e-04
## X207995_s_at 2.578018e-04
## X208079_s_at 1.441460e-04
## X208147_s_at 3.172832e-04
## X208816_x_at 5.140395e-04
## X209189_at -2.891485e-04
## X209219_at -4.572332e-05
## X209335_at -5.655422e-04
## X209365_s_at -4.325623e-04
## X209447_at -6.966264e-04
## X209458_x_at -4.794919e-03
## X209821_at 3.824085e-04
## X209825_s_at -6.717182e-05
## X210095_s_at 7.100904e-05
## X210481_s_at -1.097697e-04
## X210909_x_at 2.258369e-04
## X211023_at 3.421015e-04
## X211378_x_at -1.986437e-03
## X211628_x_at -2.921763e-04
## X211699_x_at 4.562692e-03
## X211745_x_at 2.724969e-03
## X211765_x_at 5.713747e-04
## X211978_x_at -1.897726e-03
## X212149_at -3.533307e-05
## X212551_at 1.448257e-03
## X212554_at -1.412537e-03
## X212661_x_at 3.797711e-03
## X213068_at -2.617551e-04
## X213629_x_at 1.469679e-03
## X214414_x_at 1.131277e-04
## X214421_x_at -2.708865e-02
## X214710_s_at -1.200291e-04
## X215138_s_at -7.539229e-05
## X215330_at -2.221809e-04
## X215768_at 7.433231e-05
## X216025_x_at 1.975405e-02
## X216661_x_at -1.023993e-03
## X216782_at 2.015325e-05
## X217165_x_at -1.622772e-03
## X217319_x_at 3.943539e-04
## X217414_x_at -3.524219e-04
## X217521_at -6.690846e-04
## X218002_s_at -1.806955e-04
## X218061_at 2.650039e-05
## X219485_s_at 1.218035e-04
## X219787_s_at 4.019346e-04
## X220017_x_at 7.701343e-03
## X220114_s_at 2.139681e-04
## X220116_at -1.081523e-04
## X220148_at 2.847679e-04
## X220491_at 1.252648e-04
## X220496_at 4.278512e-04
## X36829_at -1.297466e-04get_pca_var(pca)[4]## $contrib
## Dim.1 Dim.2 Dim.3 Dim.4 Dim.5
## X200606_at 3.992502e-01 1.809618e-04 1.3654057073 1.0471489754 5.718786e-02
## X200734_s_at 6.206598e-02 1.918609e-01 0.2152320256 1.1813121630 1.412812e-02
## X200882_s_at 1.106141e+00 3.009381e-01 0.1416753373 0.1827090445 1.022095e-02
## X200910_at 1.338805e+00 1.975911e-01 0.1741291031 0.0211158770 3.387824e-01
## X200954_at 9.444494e-03 1.139811e+00 4.6869720419 0.9176987445 5.822118e-02
## X201128_s_at 1.143169e+00 7.384023e-01 0.4759593609 0.1031466572 2.332209e-02
## X201184_s_at 3.656417e-01 5.642412e-01 2.1144050114 0.1082081364 8.333477e-02
## X201293_x_at 1.190266e+00 6.252513e-01 1.3378828831 0.3617652183 2.848582e-01
## X201398_s_at 6.468042e-01 4.653454e-04 4.9452963847 0.0050796084 5.477398e-02
## X201441_at 6.389849e-01 1.465142e-02 0.4129878809 3.4347265444 2.497021e+00
## X201453_x_at 9.906077e-01 1.532642e-03 2.3869247219 0.1252806187 2.029331e-02
## X201516_at 8.176234e-01 1.287390e+00 0.3760270624 0.1728775194 8.268978e-01
## X201527_at 8.239693e-01 8.458221e-01 0.1553781445 0.0332436128 3.265131e-01
## X201531_at 8.599989e-01 8.318224e-01 0.7002620284 0.0763106250 4.341876e-02
## X201577_at 1.166929e+00 2.985110e-01 1.5327574494 0.0524589657 7.240885e-01
## X201584_s_at 1.023717e+00 9.360618e-01 0.0714565025 0.0040351452 3.842769e-01
## X201656_at 9.638401e-01 6.625194e-03 0.6210270937 0.6780839966 1.846235e+00
## X202541_at 5.030059e-01 7.112304e-04 4.6428652430 1.8597820382 1.482139e-02
## X202737_s_at 9.525117e-01 7.076401e-01 1.2233200345 0.0727660926 1.529739e+00
## X202861_at 1.134156e+00 7.535762e-02 0.0120798554 0.2881849828 7.691465e-02
## X202940_at 1.167469e-05 1.461622e+00 3.8575817438 0.3170471966 9.904452e-01
## X202963_at 1.011793e+00 2.426560e-02 0.4901042990 0.0417670635 1.794092e-01
## X203316_s_at 1.209729e+00 3.532215e-02 0.5445138698 0.1073785701 6.848704e-01
## X203554_x_at 1.353132e+00 2.980723e-01 0.0468535496 0.0250692152 9.509885e-01
## X203755_at 1.163236e+00 7.399944e-01 0.2886329131 0.0264949104 2.100971e+00
## X204018_x_at 7.286492e-01 8.677873e+00 0.0085426774 3.4050438209 1.786240e+00
## X204301_at 8.070654e-01 1.494009e-01 0.0024195197 0.8710755811 8.769971e-02
## X204428_s_at 1.378454e+00 6.250654e-02 0.0545563452 0.1248353659 1.079960e-01
## X204641_at 1.164245e+00 5.062571e-01 0.1570600966 0.0010741468 1.019705e+00
## X204977_at 7.801457e-01 7.015564e-02 0.4490320266 0.4813698866 5.043542e-02
## X205019_s_at 1.418115e+00 4.385294e-03 0.0048867118 0.5183710001 1.424624e-01
## X205086_s_at 6.937120e-01 2.222083e-01 0.2966703475 0.9822049630 1.092273e+00
## X205298_s_at 2.615819e-01 6.254420e-03 2.1058837343 1.1191386578 1.470501e+00
## X205306_x_at 9.444183e-01 1.809225e-01 0.5208967001 2.7149831590 1.352455e+00
## X205392_s_at 1.156763e+00 8.013460e-03 0.3573640050 0.0531014904 1.022909e-02
## X205440_s_at 8.843414e-01 8.190205e-01 0.7566867885 3.5356972893 3.718423e-01
## X205531_s_at 1.123833e+00 1.565703e-01 0.0240582568 1.7420418201 2.121290e+00
## X205554_s_at 1.304795e+00 5.827414e-03 0.9128398396 0.1233838792 2.043108e-01
## X205740_s_at 8.121789e-01 5.044050e-01 0.0949198284 0.1853921344 1.841765e+00
## X205819_at 9.948731e-01 1.672574e+00 0.8847549354 0.6822043326 6.581533e-01
## X205858_at 9.352405e-01 7.177254e-01 0.5399114712 1.2213811300 2.689238e-01
## X205866_at 1.357810e+00 3.888345e-01 0.2397815448 0.7396952181 6.291563e-01
## X205890_s_at 7.421666e-01 1.927663e-01 0.4938925075 0.0493539619 2.490799e-04
## X205911_at 1.224274e+00 8.039200e-02 0.0323272906 0.7232729451 3.345287e-01
## X206380_s_at 1.132087e+00 8.680065e-01 0.2520970902 0.8273723710 9.829256e-01
## X206453_s_at 1.244238e+00 2.381585e-01 0.1320721005 0.4405637776 1.005863e-01
## X206643_at 3.070640e-01 5.590109e-05 0.7784762774 4.3814833908 1.349501e+01
## X206680_at 1.193217e+00 4.752125e-01 0.4262373189 0.1980384869 4.803478e-02
## X207076_s_at 1.092040e+00 9.046462e-02 0.0968544057 1.7087978335 2.391335e+00
## X207218_at 8.493422e-01 1.465427e+00 2.0002809210 4.0866234211 7.199977e-03
## X207262_at 1.258276e+00 6.062571e-02 0.8431259822 0.4222118669 4.667301e-01
## X207330_at 5.274761e-01 7.031324e-01 0.1232650048 0.1595653852 8.066470e-02
## X207609_s_at 1.344048e+00 7.938799e-02 0.0162746110 0.3019469627 9.232995e-04
## X207804_s_at 1.209008e+00 8.212366e-01 0.1737062654 1.0085005584 1.049776e+00
## X207828_s_at 1.284365e+00 2.339237e-01 0.5387629641 0.0279830661 1.318276e+00
## X207995_s_at 1.070144e+00 4.897606e-01 0.1547118901 0.9549467895 2.650579e+00
## X208079_s_at 1.193658e+00 4.869901e-02 0.1078405810 0.4172337631 1.347178e+00
## X208147_s_at 9.853731e-01 1.793401e+00 1.2675769225 0.5695123245 4.708210e-01
## X208816_x_at 9.060328e-01 1.216726e+00 0.4117781017 0.4911601096 7.655251e-01
## X209189_at 1.143426e+00 8.282447e-01 0.2466788751 0.2037041531 1.459302e-03
## X209219_at 1.133520e+00 5.701702e-02 0.2809697118 0.0666805864 2.994269e-01
## X209335_at 1.057730e+00 4.546284e-01 0.3151868910 2.4172614105 2.067195e-01
## X209365_s_at 1.392690e+00 3.426051e-01 0.1811366569 0.8323113194 2.249189e-01
## X209447_at 1.151350e+00 7.117770e-02 0.0001502439 0.0895682967 3.728173e-02
## X209458_x_at 7.299951e-01 8.631301e+00 0.0071937790 3.4567886721 1.783738e+00
## X209821_at 3.850669e-01 8.995798e-01 3.5865238792 4.1831854620 1.055753e+00
## X209825_s_at 1.192000e+00 4.269316e-01 0.0013824011 0.0785819352 1.270277e+00
## X210095_s_at 7.767121e-01 1.062690e+00 0.3096001441 2.9711642660 6.165099e-01
## X210481_s_at 1.202348e+00 2.942371e-01 0.0029493029 0.3669430562 9.874739e-01
## X210909_x_at 9.649982e-01 9.609238e-02 0.5690752269 0.0421195053 2.094548e+00
## X211023_at 9.585446e-02 1.064445e-02 2.8224895038 0.0051232324 3.108778e+00
## X211378_x_at 1.216383e+00 5.732173e-01 1.0742342562 0.3372419067 1.815149e-01
## X211628_x_at 7.106233e-01 2.099852e-01 0.3416552970 0.7517563731 2.805553e-02
## X211699_x_at 7.231985e-01 8.891420e+00 0.0105385118 2.8788299087 1.932882e+00
## X211745_x_at 7.188536e-01 8.887401e+00 0.0104049774 3.2879431073 1.829405e+00
## X211765_x_at 1.197690e+00 5.837403e-01 1.3358466248 0.4161058083 2.645760e-01
## X211978_x_at 1.245832e+00 5.602722e-01 1.0511874621 0.2870935455 2.510071e-01
## X212149_at 2.305413e-01 6.033541e-01 7.7879737182 0.0001748103 1.112439e+00
## X212551_at 1.001370e+00 2.719591e-01 1.1346214718 0.4895418611 5.447356e-01
## X212554_at 1.105099e+00 2.627277e-01 1.6251600424 0.1041501456 4.799481e-01
## X212661_x_at 1.186508e+00 6.546767e-01 1.2942053822 0.4496067327 3.483419e-01
## X213068_at 5.871952e-01 1.487298e+00 2.1760782108 2.1873601435 1.171228e-01
## X213629_x_at 1.172588e+00 7.328144e-02 0.0018876971 0.0089948920 3.629049e-02
## X214414_x_at 7.382724e-01 8.011224e+00 0.1399101180 2.7310762546 2.356553e+00
## X214421_x_at 9.748372e-01 1.501312e+00 2.9771419306 1.9606869007 3.814974e-01
## X214710_s_at 1.293189e+00 4.344598e-01 0.0189085771 0.0058718700 1.426172e+00
## X215138_s_at 2.843572e-01 3.322354e-01 4.1984334444 0.0335816308 5.499308e-01
## X215330_at 6.273332e-01 6.160556e-01 0.2969124837 0.3396734242 2.425949e-01
## X215768_at 5.363751e-01 2.040449e-01 0.0120000123 0.1158259304 4.329811e-01
## X216025_x_at 9.769296e-01 1.580401e+00 2.8852705695 1.8590662389 4.314734e-01
## X216661_x_at 1.004704e+00 1.438585e+00 3.0024881818 1.9971327092 2.643598e-01
## X216782_at 3.974819e-01 3.055553e-03 1.3563983368 0.0534824219 2.049363e+00
## X217165_x_at 1.160222e+00 9.006631e-03 0.1401386225 0.0008181546 1.030322e-02
## X217319_x_at 1.169936e+00 1.085180e+00 1.1025621840 1.6194973286 2.892134e-02
## X217414_x_at 7.365302e-01 8.558964e+00 0.0306577358 3.2793996032 1.918455e+00
## X217521_at 5.147078e-01 3.170875e-02 0.9552883223 4.6559083797 1.116923e+01
## X218002_s_at 1.360533e+00 2.596114e-01 0.0354339283 0.9608235879 2.742024e-01
## X218061_at 9.293908e-01 9.024565e-02 0.0334151286 0.9131997620 4.395476e-01
## X219485_s_at 9.483460e-01 2.345598e-01 4.1592171913 0.0392626444 5.153649e-02
## X219787_s_at 1.191170e+00 7.380559e-01 0.0150282850 0.2099991558 3.633881e-01
## X220017_x_at 9.525869e-01 1.741651e+00 2.8387850730 1.8933110507 5.541741e-01
## X220114_s_at 1.291002e+00 6.277613e-01 0.2714487492 0.6424723706 1.159854e+00
## X220116_at 9.406472e-01 2.549936e-01 0.0022863782 0.2388488810 1.825863e+00
## X220148_at 9.416295e-01 9.111485e-01 0.6260423603 2.6178238460 7.938651e-01
## X220491_at 1.148973e+00 1.977624e-01 0.0042144046 0.2521557272 2.562935e-01
## X220496_at 1.263793e+00 3.389852e-01 0.3826387719 0.8400038518 1.351954e+00
## X36829_at 1.111618e+00 2.300569e-01 0.2689736326 0.3145947343 6.768895e-03
## Dim.6 Dim.7 Dim.8 Dim.9 Dim.10
## X200606_at 6.528290e+00 6.196660e-01 6.227644e-02 1.086867e+01 4.599725e-01
## X200734_s_at 1.199409e+01 5.729216e-01 9.128162e+00 9.249474e+00 8.048421e-01
## X200882_s_at 3.248225e-01 2.516764e-02 1.367222e+00 3.376610e-02 6.675366e-01
## X200910_at 1.876462e-01 1.877035e-02 7.542221e-01 6.013555e-01 2.884385e-01
## X200954_at 5.326187e+00 9.225554e+00 6.730972e-01 4.684088e+00 6.392703e+00
## X201128_s_at 6.844242e-02 7.871268e-01 9.128888e-01 5.741532e-01 2.586388e-01
## X201184_s_at 6.395867e+00 3.301397e-01 5.655315e+00 2.125471e+00 4.435103e+00
## X201293_x_at 1.683055e+00 6.838761e-01 1.194412e+00 1.206319e-01 2.110634e+00
## X201398_s_at 1.206214e-01 1.406810e+00 8.198345e-01 8.175757e-02 1.914210e-02
## X201441_at 5.321292e+00 2.637871e-01 2.884627e-01 1.654938e-01 9.263181e-01
## X201453_x_at 4.882598e-01 1.294309e+00 2.720329e-01 1.895243e-01 3.571527e-02
## X201516_at 4.369142e-01 5.551530e-01 5.729188e-01 1.570188e-01 1.107648e+00
## X201527_at 4.117704e+00 6.708674e-01 1.389786e-01 1.402202e+00 2.952821e+00
## X201531_at 5.042221e-01 2.034593e-02 1.813410e-02 4.788426e+00 8.880151e+00
## X201577_at 9.806667e-04 6.114696e-01 9.711869e-03 1.186777e-03 2.068279e-02
## X201584_s_at 3.255932e-01 6.050548e-01 4.944592e-01 1.807421e+00 5.262968e-01
## X201656_at 8.009584e-01 5.327855e-01 4.885883e-02 1.507953e-01 2.321606e-06
## X202541_at 2.815741e+00 6.008083e-01 2.371906e+00 8.124208e-03 1.379070e+00
## X202737_s_at 2.523288e-02 7.425749e-01 2.065073e+00 1.001134e-01 1.189974e-01
## X202861_at 3.304301e-01 2.280818e-01 1.582226e+00 4.285337e+00 6.809077e-01
## X202940_at 4.945223e-01 3.405847e+00 1.015043e+01 2.059704e+00 4.139894e+00
## X202963_at 7.698816e-01 2.520964e+00 5.376980e-02 1.023320e+00 1.086576e+00
## X203316_s_at 1.504922e+00 4.151628e-01 1.017955e+00 6.879448e-03 8.861110e-01
## X203554_x_at 1.090216e-02 1.889454e-01 1.869649e-01 9.738775e-01 4.278383e-03
## X203755_at 1.257973e-01 4.836896e-02 3.836142e-03 1.945177e+00 9.647867e-01
## X204018_x_at 8.693814e-01 8.782389e-03 2.055554e-02 6.403617e-02 1.658292e-01
## X204301_at 1.159882e+00 3.748096e+00 3.259786e-01 1.095261e-01 5.030619e-01
## X204428_s_at 2.043245e-02 2.210047e-01 1.175201e-01 1.488771e-02 1.907411e-01
## X204641_at 7.809014e-01 1.425597e-02 6.904532e-01 1.280223e+00 7.490990e-02
## X204977_at 9.812504e-01 8.486056e-02 1.430315e+00 3.366553e-01 1.384389e+00
## X205019_s_at 4.228239e-02 3.783464e-01 3.376875e-02 1.948122e-01 1.384566e-03
## X205086_s_at 5.521896e-01 6.288886e-02 6.145956e-01 1.350129e-04 6.243407e-01
## X205298_s_at 9.396928e-01 1.472676e+00 1.442404e+00 6.657662e+00 7.688074e-01
## X205306_x_at 1.106702e-01 4.137415e-01 1.324940e-01 3.434835e-01 1.007735e-03
## X205392_s_at 2.409733e-01 2.702730e-02 9.072999e-01 1.605942e-02 1.593922e+00
## X205440_s_at 8.720165e-02 1.291680e-01 1.023622e-01 1.182435e-01 7.542296e-02
## X205531_s_at 2.260696e-01 2.468260e-02 2.642017e-01 4.185026e-02 3.878229e-01
## X205554_s_at 7.184895e-02 2.089388e-02 3.975370e-01 2.967839e-02 5.189367e-01
## X205740_s_at 3.141436e-02 8.159448e-03 1.168841e+00 1.688360e+00 4.515689e+00
## X205819_at 3.307038e-01 1.103234e-02 8.399992e-01 2.066940e+00 2.936213e-01
## X205858_at 4.008163e-01 5.839436e-01 1.039329e+00 5.145460e-01 9.546909e-01
## X205866_at 3.181035e-01 8.031042e-02 4.880185e-01 8.805587e-02 1.797349e-03
## X205890_s_at 2.240503e+00 8.341193e+00 2.523308e-01 9.431584e-02 3.463520e-01
## X205911_at 1.689271e-01 4.313998e-02 4.614226e-04 5.090603e-02 4.010668e-01
## X206380_s_at 1.182596e-01 1.126611e-01 7.734326e-01 3.538685e-01 9.551883e-03
## X206453_s_at 4.957818e-02 9.106861e-02 2.927551e-05 2.763381e-01 4.349396e-03
## X206643_at 1.562745e-01 8.733745e+00 3.373389e-04 1.139731e-01 9.489724e-01
## X206680_at 2.510895e-03 1.317382e-01 2.134916e-01 5.923734e-01 2.901185e-01
## X207076_s_at 3.305898e-01 2.313193e-01 4.114011e-03 5.114128e-01 1.750713e-02
## X207218_at 3.531650e-01 2.349076e-01 2.082298e-01 8.301746e-01 6.335279e-02
## X207262_at 1.567311e-01 3.760443e-02 1.987876e-01 5.737555e-01 5.105638e-02
## X207330_at 2.200711e-02 9.556940e-01 4.383546e-01 4.448179e-01 8.870903e-01
## X207609_s_at 2.889177e-01 1.147314e+00 1.218269e-02 2.826138e-02 1.123522e-01
## X207804_s_at 2.605269e-03 3.497013e-02 7.202337e-01 4.519484e-01 1.683412e-01
## X207828_s_at 9.126416e-02 4.141949e-02 1.455313e+00 5.350626e-02 7.426090e-05
## X207995_s_at 9.577676e-02 3.244590e-01 2.943409e-01 1.782452e-01 1.582088e-04
## X208079_s_at 2.648388e-02 7.952681e-04 1.411337e-02 1.033794e-01 1.074210e-01
## X208147_s_at 8.469888e-01 3.006729e-01 1.324539e-01 1.718239e-01 1.854461e-01
## X208816_x_at 2.323096e+00 1.600750e+00 1.955737e-01 1.691325e-01 9.852153e-01
## X209189_at 6.122055e-02 2.572191e-01 6.111648e-02 1.128143e+00 4.655343e+00
## X209219_at 4.246961e-01 8.295028e-01 8.904932e-01 1.354308e+00 3.316396e-01
## X209335_at 2.293809e+00 1.996247e+00 1.075023e-01 2.426719e-01 8.856922e-01
## X209365_s_at 3.092031e-01 4.857456e-03 1.946967e-01 1.909620e-02 1.714850e-01
## X209447_at 1.202008e-01 1.676217e-01 1.066359e+00 7.347514e-03 1.044443e-03
## X209458_x_at 1.046462e+00 1.153994e-03 2.203240e-02 1.429296e-02 1.363193e-01
## X209821_at 8.654683e-02 3.992193e+00 1.217970e-01 6.790037e-01 3.229955e+00
## X209825_s_at 3.576568e-01 1.214579e-02 6.183442e-01 4.385873e-02 6.095926e-01
## X210095_s_at 3.326697e-01 1.005964e+00 1.893922e-03 1.445634e-01 2.248343e+00
## X210481_s_at 2.412661e-02 3.296176e-01 8.140884e-01 3.202060e-01 9.131257e-02
## X210909_x_at 1.131439e+00 2.616579e+00 2.290251e-01 2.806102e-01 4.331279e-01
## X211023_at 7.822378e+00 4.883581e-01 3.185906e+00 2.514253e-03 2.291543e-02
## X211378_x_at 1.643832e+00 6.912509e-01 1.075571e+00 5.513892e-02 2.281955e+00
## X211628_x_at 1.767799e-01 4.286935e-01 3.868857e-01 8.598242e-01 2.308999e+00
## X211699_x_at 1.021247e+00 1.124431e-03 1.208778e-02 1.022244e-02 1.523462e-01
## X211745_x_at 1.108229e+00 1.570749e-03 2.464498e-04 1.278431e-02 1.145113e-01
## X211765_x_at 1.586579e+00 7.179007e-01 1.170245e+00 1.329441e-01 2.043389e+00
## X211978_x_at 1.545579e+00 3.114663e-01 8.038064e-01 1.007769e-01 1.788614e+00
## X212149_at 3.270971e-02 8.029614e-04 5.359662e+00 5.656316e-03 2.851988e-01
## X212551_at 6.431003e-01 4.958589e-01 9.743093e-01 1.518528e+00 3.447936e-03
## X212554_at 4.588918e-01 1.105073e+00 7.014452e-01 4.306474e-01 1.030949e-01
## X212661_x_at 1.845633e+00 6.662007e-01 1.149037e+00 1.688688e-01 1.799765e+00
## X213068_at 2.775150e+00 5.039519e+00 6.001334e-01 1.097165e+00 1.214876e-01
## X213629_x_at 1.545819e-02 3.012156e-01 1.373972e+00 5.683466e-01 1.782503e+00
## X214414_x_at 1.319525e+00 2.853654e-02 7.746217e-02 1.297777e-01 7.873155e-02
## X214421_x_at 4.142347e-03 7.499950e-01 1.279176e+00 1.633849e-01 3.204741e-01
## X214710_s_at 1.014027e-01 1.552501e-01 5.855874e-02 1.112027e+00 2.673917e-01
## X215138_s_at 8.110890e-01 3.384740e-02 5.186552e+00 1.071411e+00 3.255631e+00
## X215330_at 3.806699e-03 2.084055e-01 1.795163e+00 7.914257e+00 2.633481e+00
## X215768_at 3.674892e-01 1.007002e-01 7.545358e+00 1.320395e+00 2.880657e+00
## X216025_x_at 4.273719e-03 7.744611e-01 1.246395e+00 8.350090e-02 1.777206e-01
## X216661_x_at 4.164761e-03 4.717036e-01 1.449781e+00 2.263569e-01 1.281916e-01
## X216782_at 1.651713e+00 4.622162e+00 2.209078e-01 1.568098e+00 8.406338e-01
## X217165_x_at 3.805546e-03 5.063923e-01 1.457309e+00 4.528053e-01 1.704824e+00
## X217319_x_at 9.450499e-04 1.557662e-01 1.982239e-01 6.161455e-02 1.814918e-01
## X217414_x_at 1.021569e+00 9.515735e-07 2.331790e-03 8.708417e-02 8.423164e-02
## X217521_at 1.261681e-01 5.892368e+00 1.428339e-03 3.728467e-01 5.151987e-01
## X218002_s_at 9.284567e-02 5.283039e-04 6.240840e-02 7.197433e-02 6.613348e-02
## X218061_at 1.175959e-01 1.097144e-01 1.360114e-01 6.104940e-02 1.002707e+00
## X219485_s_at 4.761225e-01 7.461585e-02 3.131957e-02 7.096098e-01 6.814830e-01
## X219787_s_at 3.308387e-01 1.538196e-02 5.395023e-02 2.799143e+00 2.019018e+00
## X220017_x_at 8.360320e-03 9.420842e-01 1.339304e+00 6.451241e-02 1.980894e-01
## X220114_s_at 3.173900e-02 3.344667e-02 3.614888e-01 7.535223e-07 2.190031e-01
## X220116_at 8.841550e-01 4.901430e+00 2.603811e-01 1.656933e-01 1.359594e-03
## X220148_at 6.683025e-03 1.687005e+00 2.235160e-01 1.127162e+00 4.749908e-02
## X220491_at 2.901937e-01 8.484556e-02 4.416665e-02 8.001829e-03 4.851839e-01
## X220496_at 2.057384e-02 5.094436e-01 5.668932e-01 7.885960e-01 9.652558e-02
## X36829_at 3.173328e-01 4.519003e-01 7.086587e-01 4.475826e+00 7.301865e-01
## Dim.11 Dim.12 Dim.13 Dim.14 Dim.15
## X200606_at 7.895352e-02 3.690486e-02 7.018194e-01 4.904316e+00 8.105022e-01
## X200734_s_at 3.996364e+00 2.566188e-01 1.949529e+00 8.834971e+00 6.034159e-01
## X200882_s_at 8.942510e-01 6.208840e-03 8.098922e-02 2.824106e-01 5.602454e-01
## X200910_at 4.683806e-02 1.449116e-03 8.250668e-02 5.492536e-04 2.428166e-01
## X200954_at 5.095865e-02 1.678121e+00 2.062251e+00 2.414212e-01 6.023897e+00
## X201128_s_at 1.824860e-01 1.984815e-02 1.418001e+00 1.282169e-01 9.024056e-02
## X201184_s_at 5.987389e-03 2.926444e+00 9.172910e-01 1.928339e-03 3.798038e+00
## X201293_x_at 1.051220e+00 2.469290e-01 3.385967e-02 6.981348e-01 6.725068e-02
## X201398_s_at 1.168684e+00 2.553221e-01 1.463244e+00 2.904843e+00 7.879366e+00
## X201441_at 5.582411e-03 6.133351e-01 6.955628e+00 1.854044e-01 1.484346e-02
## X201453_x_at 3.916247e-01 4.520246e-02 1.364487e+00 7.173413e-02 1.449261e+00
## X201516_at 4.227682e-01 2.137486e-03 3.578385e-01 2.635774e+00 2.444711e-02
## X201527_at 4.681472e-01 3.464300e-01 6.294532e-01 8.413590e-03 6.729952e-01
## X201531_at 1.469946e+00 4.970981e-01 1.051486e+00 1.034678e-01 2.311345e-01
## X201577_at 4.828862e-01 3.044061e-02 3.572733e-02 6.672454e-01 1.137974e+00
## X201584_s_at 6.351451e-01 2.607558e+00 6.363449e-02 3.391219e-01 4.270034e-01
## X201656_at 8.956925e-01 2.638603e-01 2.204105e-02 1.332169e-02 4.006858e-01
## X202541_at 7.861651e-04 8.943965e-01 1.016491e+00 1.236562e-01 6.741707e-01
## X202737_s_at 3.057128e-02 1.002744e-01 3.380502e-01 2.062331e-04 8.431177e-01
## X202861_at 6.819485e-01 1.148651e+00 2.987996e-01 1.776552e-01 2.919109e-01
## X202940_at 7.247321e-01 1.438773e+00 1.634951e+00 9.157607e-01 4.775654e-03
## X202963_at 6.267339e-01 4.949167e-01 6.450901e-01 4.324741e-02 1.734388e+00
## X203316_s_at 1.091463e-01 3.113165e-01 1.409891e+00 2.884489e-01 6.202928e-02
## X203554_x_at 2.793595e-01 1.859843e+00 1.383078e-01 1.837421e-01 1.892090e-01
## X203755_at 3.211458e-02 3.144097e+00 1.898820e-01 4.203187e-01 1.258936e-02
## X204018_x_at 7.438651e-03 9.241824e-05 8.173505e-02 4.588003e-02 2.741446e-02
## X204301_at 5.716042e-01 4.141716e-02 2.345710e+00 3.275910e-03 4.640168e-01
## X204428_s_at 9.713280e-01 9.782474e-01 7.925439e-02 1.101276e-01 5.632936e-02
## X204641_at 5.070835e-01 4.299170e+00 3.769600e-03 1.144924e-04 2.839708e-02
## X204977_at 1.150438e-04 3.120633e-01 5.380831e-01 1.689232e+00 1.149459e+00
## X205019_s_at 2.677520e-01 1.748722e-01 1.044615e-01 1.741995e-01 5.618062e-01
## X205086_s_at 9.625020e-01 1.403835e-01 2.378442e+00 3.170310e+00 3.886866e-02
## X205298_s_at 1.486357e+00 1.296517e-01 1.793825e+01 3.102411e+00 4.306509e+00
## X205306_x_at 9.102805e-02 7.359104e-01 1.782101e-01 1.908106e+00 2.630903e-01
## X205392_s_at 3.030198e-01 4.214877e+00 4.019968e-01 7.451965e-01 1.031582e+00
## X205440_s_at 8.529757e-03 4.571263e-02 7.861736e+00 1.690308e+00 1.581577e-01
## X205531_s_at 2.325597e-01 4.084300e-01 1.656841e-03 1.154175e-02 9.183734e-02
## X205554_s_at 1.204380e-01 1.542491e+00 3.807639e-01 7.812686e-02 1.249892e+00
## X205740_s_at 4.723732e-01 2.209928e-01 1.432026e-01 1.916384e+00 3.299465e-01
## X205819_at 7.991465e-02 1.392668e-01 2.175316e+00 7.306819e-02 8.126044e-01
## X205858_at 1.129190e+00 4.979194e-02 2.431609e-01 1.013050e-01 5.839644e-01
## X205866_at 2.024274e-02 3.411024e-02 7.272281e-03 1.609495e-01 2.325900e-01
## X205890_s_at 7.634931e-01 1.411385e-01 1.413178e+00 3.369930e+00 8.646606e-01
## X205911_at 1.568403e+00 2.632992e-01 3.710102e-02 7.475157e-02 1.373736e+00
## X206380_s_at 5.263517e-01 4.233746e-03 7.458919e-01 3.391808e-01 5.462277e-01
## X206453_s_at 1.245293e+00 1.770839e-02 1.686222e-01 3.143714e-02 1.611850e+00
## X206643_at 2.039281e-01 3.100526e+00 4.992068e-01 4.328735e-01 3.820425e-01
## X206680_at 2.445688e-02 4.566829e-02 1.026006e+00 1.076031e+00 5.891959e-05
## X207076_s_at 2.856114e+00 8.956069e-02 3.126674e-01 2.073533e-02 4.755792e-01
## X207218_at 6.436267e-01 1.923831e-01 1.418018e-01 6.285882e-01 3.145114e-04
## X207262_at 1.358675e-01 2.501696e-02 4.656045e-01 1.037714e-02 8.845197e-05
## X207330_at 3.983729e+00 1.966833e+00 6.683085e-01 5.809667e-01 7.557825e+00
## X207609_s_at 1.270442e-02 1.691488e+00 8.257278e-02 5.495012e-02 1.190081e-02
## X207804_s_at 8.020380e-01 6.292233e-03 3.883187e-01 4.947106e-02 5.234251e-01
## X207828_s_at 1.536925e-01 2.804296e+00 2.860327e-01 1.101413e-01 3.289795e-01
## X207995_s_at 3.582524e-01 9.622867e-02 1.685010e+00 4.088114e-01 2.294551e+00
## X208079_s_at 1.435045e+00 1.430319e+00 2.387152e-01 8.147738e-01 7.289213e-02
## X208147_s_at 1.782143e+00 3.731164e-01 9.304921e-01 6.396360e-01 3.780439e-01
## X208816_x_at 1.033729e-01 1.312820e+00 6.503307e-01 1.133523e+00 6.754993e-01
## X209189_at 1.305762e-02 8.923416e-02 5.385844e-02 3.087204e-03 4.314188e-01
## X209219_at 1.880762e+00 1.696406e-02 6.001657e-01 6.749021e-01 1.993889e+00
## X209335_at 1.400900e-01 2.984660e-02 1.124563e+00 3.332899e-02 2.275126e-02
## X209365_s_at 5.600668e-03 9.637867e-02 1.143541e-03 3.800477e-01 3.317294e-03
## X209447_at 3.282111e-01 6.518309e-04 8.499183e-01 5.790657e-01 6.330530e-02
## X209458_x_at 4.640886e-03 8.938155e-04 6.166968e-02 7.017940e-03 2.234757e-02
## X209821_at 1.729750e-01 1.697639e+00 2.621300e+00 1.579784e+00 3.004010e-01
## X209825_s_at 1.481720e-02 5.805795e-01 1.015364e+00 7.740237e-02 3.178536e-01
## X210095_s_at 2.399126e-01 3.213965e+00 3.184815e-01 9.512088e-01 1.004823e+00
## X210481_s_at 9.880166e-01 1.441225e-02 1.747410e+00 4.439751e-02 3.571514e-01
## X210909_x_at 2.863387e-01 2.956294e-01 5.337329e-02 8.248627e-02 3.815960e-01
## X211023_at 1.020049e+01 4.614809e-01 1.512458e+00 1.245451e+01 1.947295e+00
## X211378_x_at 8.902570e-01 1.695685e-01 7.393754e-02 8.054577e-01 4.287522e-02
## X211628_x_at 5.466892e+00 3.591126e+00 7.416154e-01 3.718149e+00 1.041292e+00
## X211699_x_at 4.257214e-03 1.649839e-06 6.528916e-02 5.732151e-03 2.267986e-02
## X211745_x_at 9.748545e-03 4.383531e-04 1.168097e-01 1.628813e-02 5.721425e-04
## X211765_x_at 1.045706e+00 1.799822e-01 1.678779e-02 7.024155e-01 6.310150e-02
## X211978_x_at 1.024975e+00 2.072035e-01 5.029400e-03 8.647054e-01 1.594804e-01
## X212149_at 7.312415e+00 1.517240e-01 2.187969e+00 2.711917e-02 7.119186e+00
## X212551_at 2.607157e+00 1.091934e+00 4.072084e-02 9.674757e-02 2.411621e+00
## X212554_at 3.412986e+00 9.532392e-01 3.307119e-02 3.721905e-01 1.811314e+00
## X212661_x_at 9.461359e-01 2.346638e-01 2.768494e-02 8.327791e-01 5.294908e-02
## X213068_at 7.151183e-01 7.539076e-02 3.946712e+00 1.160008e-02 7.750204e-01
## X213629_x_at 2.335843e-01 6.431959e-01 9.720306e-01 2.817544e+00 4.636054e-01
## X214414_x_at 2.397914e-02 2.368564e-02 3.833662e-01 7.868585e-05 8.864623e-03
## X214421_x_at 7.504083e-04 7.086552e+00 3.213208e-02 5.666433e-04 5.478096e-02
## X214710_s_at 4.605673e-03 2.465079e+00 8.822832e-02 1.987254e-01 1.727094e-01
## X215138_s_at 3.380985e+00 1.697095e+00 1.143916e+00 3.008322e+00 7.885988e+00
## X215330_at 4.204713e+00 2.610080e-01 5.653767e-01 1.654162e-01 2.964617e+00
## X215768_at 3.513172e+00 2.308805e-01 2.475096e+00 1.183505e+01 1.105226e+00
## X216025_x_at 8.216431e-03 7.015591e+00 6.953849e-03 3.249596e-03 1.265371e-01
## X216661_x_at 4.896230e-03 5.795025e+00 7.629889e-02 1.543049e-02 1.924844e-02
## X216782_at 2.554250e-01 1.431754e-01 2.099908e+00 1.879612e+00 2.985050e+00
## X217165_x_at 2.164743e-01 2.484949e-01 9.461545e-01 3.423510e+00 9.969891e-01
## X217319_x_at 3.674453e-04 1.574540e-01 9.130337e-04 1.049185e-01 5.865623e-02
## X217414_x_at 3.302113e-03 6.933052e-05 5.857658e-02 2.491675e-02 2.201973e-02
## X217521_at 3.519976e-01 2.070292e+00 5.234892e-01 3.061057e-01 1.834474e-01
## X218002_s_at 1.872304e-03 4.420313e-01 9.094515e-03 1.257078e-01 3.188115e-01
## X218061_at 4.730380e+00 6.533702e-03 3.914625e-02 1.400609e+00 4.096455e+00
## X219485_s_at 4.428811e-02 4.075257e-02 8.101679e-01 3.823184e-01 6.991194e-01
## X219787_s_at 6.146227e-01 3.473313e+00 6.198712e-02 9.034999e-02 9.082178e-04
## X220017_x_at 3.554979e-02 7.247820e+00 5.328017e-04 4.777743e-04 1.357667e-01
## X220114_s_at 5.717277e-01 6.554186e-02 3.618849e-01 1.270627e-01 2.083507e-01
## X220116_at 1.131878e+00 2.022067e-02 1.223847e+00 1.859856e-02 1.898743e-01
## X220148_at 1.029751e+00 1.694624e-01 1.176747e+00 5.506014e-02 2.395028e-04
## X220491_at 6.374567e-01 4.581166e-01 1.641109e-01 1.769110e-01 2.540762e-02
## X220496_at 1.408704e-01 5.064161e-04 9.352818e-02 5.583378e-02 8.631765e-02
## X36829_at 2.585657e+00 8.305725e-01 7.046193e-03 5.321770e-01 1.143233e-01
## Dim.16 Dim.17 Dim.18 Dim.19 Dim.20
## X200606_at 1.661719e+00 3.436110e+00 6.303277e-01 8.7799925646 0.1504564602
## X200734_s_at 1.682659e+00 2.497967e+00 1.937461e+00 4.0755377231 0.9284274591
## X200882_s_at 8.898724e-02 8.173474e-01 4.764750e-01 3.3521491907 1.2241769852
## X200910_at 2.230748e-01 1.893680e-01 7.864612e-01 0.7934217462 0.2860517014
## X200954_at 8.197860e-02 1.951141e-01 2.138880e-01 0.1164602262 1.3869133242
## X201128_s_at 1.656016e-02 3.132317e-01 4.787421e+00 0.0914997758 0.8768987789
## X201184_s_at 1.848625e+00 1.258471e+00 2.244955e+00 0.0519435212 3.8855443904
## X201293_x_at 1.102388e+00 7.628449e-01 1.615954e-02 0.6588226647 0.4987385497
## X201398_s_at 8.517280e-02 1.853604e-01 3.150258e+00 0.0492941087 0.8632906742
## X201441_at 3.347638e-01 6.002427e-03 5.491580e-01 0.0699040647 0.0240042552
## X201453_x_at 4.104464e-01 1.256624e-02 1.019570e-01 0.4875976487 0.2301545038
## X201516_at 6.343345e-01 5.126907e+00 2.324772e-02 8.0592310378 1.5226720883
## X201527_at 3.052195e+00 5.087124e-01 1.337597e-01 0.5821144418 0.4750945979
## X201531_at 2.161091e-02 3.909581e+00 4.523745e-03 0.1332925298 0.7312538623
## X201577_at 9.551943e-01 1.891936e-02 3.670750e-01 0.8256146834 0.0227173032
## X201584_s_at 1.231592e+00 1.506339e+00 5.039393e-01 0.9316354087 4.8277094967
## X201656_at 1.277646e+00 2.784520e+00 8.471611e-01 3.0513403262 0.1487659627
## X202541_at 2.056509e+00 3.385619e-01 1.428752e-01 1.0681842483 3.0688669475
## X202737_s_at 3.022786e-01 3.364705e-01 6.566875e-01 0.4618371951 0.0210391587
## X202861_at 8.343901e-01 1.549614e-01 4.665178e-01 0.0190311793 1.3229806903
## X202940_at 1.749505e+01 3.975495e-01 6.052897e+00 0.1178687998 0.1114642995
## X202963_at 1.389834e+00 2.727075e+00 1.971760e+00 0.0009186207 1.9577741805
## X203316_s_at 5.198070e-03 1.179313e-01 6.325678e-01 0.0751385523 1.2781223115
## X203554_x_at 5.304707e-02 6.867942e-02 4.556998e-03 0.0003147581 0.7800463683
## X203755_at 1.789542e-01 4.603844e-01 3.265800e-01 0.0610240133 0.1667598387
## X204018_x_at 1.617884e-02 1.111993e-01 2.372883e-01 0.0055918641 0.0008369958
## X204301_at 6.136705e-03 4.075993e-01 4.413210e-01 0.0427614206 1.6054298664
## X204428_s_at 7.578354e-04 6.464553e-03 2.494326e-01 0.1290447089 0.0552235149
## X204641_at 1.504735e-01 8.188652e-02 1.017055e+00 0.0029650995 1.9686920324
## X204977_at 6.660267e+00 1.181748e-01 1.801670e+00 0.3315479020 2.2155391400
## X205019_s_at 3.623712e-02 8.859623e-01 5.056857e-01 0.2460487128 0.0141129693
## X205086_s_at 2.210649e-01 3.004476e+00 4.496630e+00 4.5715156522 5.3950058796
## X205298_s_at 4.404722e+00 4.252704e+00 1.717520e-01 2.2829261705 0.6211567203
## X205306_x_at 5.152707e-01 2.338803e-01 1.706672e-04 1.1008940965 5.6910455370
## X205392_s_at 3.811120e+00 9.605479e-02 1.781247e-01 0.1367572143 0.0398366206
## X205440_s_at 2.468771e-03 3.734193e-01 8.952826e-02 0.2653813285 0.0483831185
## X205531_s_at 1.987729e+00 5.270758e-01 2.986675e-03 0.4587639055 0.3495734497
## X205554_s_at 1.406030e+00 5.803970e-02 7.153414e-03 1.4546454884 0.0001963072
## X205740_s_at 1.973505e-01 8.586427e-02 7.024826e+00 0.2781632817 0.1643510240
## X205819_at 9.872326e-01 1.556086e-02 1.571574e-01 0.0104547497 0.2041551064
## X205858_at 5.642209e-01 2.183203e+00 2.174475e-02 0.9844935831 0.3431632134
## X205866_at 7.490601e-02 9.331363e-02 1.854812e-01 0.0430165287 0.3661205890
## X205890_s_at 4.103482e-01 3.040508e-01 1.515180e-01 1.3053688134 1.9806075683
## X205911_at 4.610359e-02 1.579673e+00 8.087871e-01 0.0313014176 0.5411362332
## X206380_s_at 2.444454e+00 9.465112e-03 1.943411e-02 0.3969794456 0.0373321202
## X206453_s_at 7.011122e-02 3.023453e-02 5.694718e-01 0.1488861619 0.0883648705
## X206643_at 1.357533e+00 9.427024e-02 2.158632e+00 1.5397773161 0.7261096170
## X206680_at 1.570004e+00 3.207359e-03 1.711766e-02 3.6986794100 0.2600946566
## X207076_s_at 2.698403e-01 6.182067e-02 3.643856e-01 0.3636481128 2.3932146140
## X207218_at 1.870022e+00 1.903694e-01 6.833357e-01 0.1115325251 0.5247434937
## X207262_at 2.924758e-01 1.791894e-03 5.986019e-03 0.0341721552 0.1207758835
## X207330_at 9.533001e-01 1.811171e+01 4.902548e+00 0.6048515588 0.0097197846
## X207609_s_at 2.187845e-02 8.735290e-02 3.926002e-01 0.4777567374 0.0859901704
## X207804_s_at 1.069143e+00 9.115163e-02 1.781539e-01 0.0830056371 0.4659441596
## X207828_s_at 1.487095e-02 2.448926e-02 9.120198e-02 0.1299816769 0.5775810081
## X207995_s_at 3.296790e-01 3.495218e-02 7.157855e-01 0.9062072195 0.9461643370
## X208079_s_at 5.793999e-03 5.924741e-02 8.691637e-01 0.1713267173 4.3795517892
## X208147_s_at 5.379297e-02 5.346018e-02 3.389891e-01 0.4977294096 0.9661134699
## X208816_x_at 3.545213e-02 7.162664e-05 1.558972e+00 3.7960280234 0.2244637713
## X209189_at 8.455212e-01 6.878083e-01 1.665599e-02 0.1818939564 0.0542898026
## X209219_at 1.235548e+00 1.353711e+00 1.813074e+00 1.3092222751 0.6172870716
## X209335_at 2.625122e-01 1.936542e-01 3.190010e-01 0.2053064720 0.1296663055
## X209365_s_at 9.876384e-02 4.036129e-06 1.125346e-01 0.1343399586 0.0441297662
## X209447_at 4.101696e-06 2.430681e-01 1.148879e-01 0.0544719691 1.8162384703
## X209458_x_at 1.519227e-03 6.623142e-02 1.588163e-01 0.0005163431 0.0017567827
## X209821_at 4.163775e-01 5.109405e-01 3.104303e-01 0.3322406236 0.0001667761
## X209825_s_at 8.061205e-03 9.618018e-02 5.318010e-01 0.2404830579 0.0169982275
## X210095_s_at 1.662379e+00 1.315646e-01 1.003597e+00 0.2694504383 2.5507866155
## X210481_s_at 8.579765e-01 4.257989e-02 1.449802e-01 0.6271022458 0.1597968579
## X210909_x_at 1.942894e-01 7.359143e-01 1.479542e-02 0.1511641378 1.9406951427
## X211023_at 6.410419e-01 1.078043e-02 1.936048e-01 0.9244834120 9.6599429653
## X211378_x_at 1.304019e+00 7.868230e-01 9.725281e-03 0.5313165003 0.6139388712
## X211628_x_at 6.009837e-01 7.437086e-01 1.012502e+01 0.9224596456 0.0051511811
## X211699_x_at 6.461704e-02 1.068651e-01 1.902616e-01 0.0521843411 0.0330248721
## X211745_x_at 4.937375e-04 5.761686e-02 8.329318e-02 0.0018653353 0.0021755902
## X211765_x_at 1.059591e+00 7.280040e-01 1.039651e-02 0.6678571074 0.4822640539
## X211978_x_at 6.470133e-01 6.898463e-01 4.846964e-02 0.6891748780 0.4886714306
## X212149_at 2.905153e+00 8.154619e-01 1.381169e+00 4.0754746272 1.5853888912
## X212551_at 9.699931e-02 5.406054e-02 4.916612e+00 1.1397018734 1.0871881418
## X212554_at 1.056784e-01 1.743252e-02 2.135621e+00 0.3372724537 0.5942641815
## X212661_x_at 8.867087e-01 9.332784e-01 1.230399e-01 0.5285657006 0.4792238237
## X213068_at 1.838054e+00 3.053437e-01 4.991503e-01 0.3252232688 0.8065156065
## X213629_x_at 7.572773e-02 3.397440e-01 3.379394e+00 1.0968277215 0.0295336972
## X214414_x_at 2.444616e-02 1.162292e-02 9.239382e-02 0.1149891434 0.0146468540
## X214421_x_at 9.225221e-04 3.285909e-01 1.452575e-01 0.0588050094 0.2671247382
## X214710_s_at 1.632064e-02 4.055239e-02 1.029880e-01 0.0226724551 0.6924951265
## X215138_s_at 3.392013e+00 2.089063e-01 1.264394e+00 3.3240169941 0.0323805217
## X215330_at 1.069864e-02 2.086299e-01 3.866422e-01 0.1063575425 2.3632111953
## X215768_at 4.196614e+00 2.768890e-01 5.066031e-02 0.5782602292 0.1027690039
## X216025_x_at 1.294148e-02 2.592298e-01 2.251402e-01 0.0217380839 0.1912010836
## X216661_x_at 1.350612e-05 3.179725e-01 7.567255e-02 0.0616981257 0.2509886395
## X216782_at 2.200164e-01 2.044657e+01 2.603071e+00 9.2697192372 0.0133612200
## X217165_x_at 1.972319e-04 6.852068e-01 3.036211e+00 0.5150348421 0.3448077375
## X217319_x_at 1.019175e-01 1.552681e-01 4.395006e-01 0.4899587408 0.4526517338
## X217414_x_at 6.578603e-02 1.838168e-02 1.734601e-01 0.0010511390 0.0025232724
## X217521_at 1.264856e+00 3.699162e-01 1.629707e+00 0.3053027592 0.3510666200
## X218002_s_at 1.954673e-02 3.600332e-01 1.047542e-01 0.5222018193 0.0945970482
## X218061_at 1.776144e+00 1.121098e-03 9.822752e-01 5.1301017679 4.8169067811
## X219485_s_at 1.813888e+00 2.365085e-01 2.693247e-01 0.0961988702 1.3672126997
## X219787_s_at 1.932550e-01 3.540710e-01 1.887005e-01 0.7073181972 1.2510981002
## X220017_x_at 4.831180e-02 2.532331e-01 2.417933e-01 0.0300228115 0.1940085798
## X220114_s_at 7.523313e-02 1.174557e-01 4.575429e-02 0.1074717608 0.2469332752
## X220116_at 1.835516e-01 3.265924e+00 4.334426e-01 0.0223915370 0.0118629702
## X220148_at 1.229391e+00 3.162063e-01 1.421813e+00 1.8053420754 1.0112799232
## X220491_at 2.729274e-01 1.145386e-01 3.531358e-01 1.3254312217 0.0970746744
## X220496_at 3.907640e-01 4.644423e-02 1.530260e-07 0.0058629371 0.7328105067
## X36829_at 3.693926e-05 5.529356e-01 6.548133e-01 0.0230812834 1.6972387502
## Dim.21 Dim.22 Dim.23 Dim.24 Dim.25
## X200606_at 4.573619e+00 1.014906e+01 4.752334e-02 4.227644e-02 7.913311e-02
## X200734_s_at 2.520814e+00 1.612862e-01 9.219185e-01 1.475283e+00 1.865228e-02
## X200882_s_at 1.127700e-01 5.523623e-02 3.276461e-01 5.779962e+00 8.680068e-01
## X200910_at 2.833433e-01 1.770102e-02 6.546580e-01 3.207190e-01 6.402141e-01
## X200954_at 1.169801e+00 2.854554e+00 2.088539e-01 5.003859e+00 2.718666e+00
## X201128_s_at 9.253364e-01 2.294679e-01 2.058031e-04 4.023312e-02 2.371567e-05
## X201184_s_at 4.499911e+00 3.229618e-02 3.583427e+00 5.760832e+00 4.387602e-01
## X201293_x_at 1.498554e-01 2.429598e-02 5.163755e-01 6.406755e-02 1.222937e-01
## X201398_s_at 5.038017e-01 3.313044e-01 8.175870e+00 4.557801e-01 4.459050e-01
## X201441_at 2.397205e-01 4.734288e-02 1.177278e+00 1.318001e+00 3.625026e+00
## X201453_x_at 8.637352e-01 2.955715e+00 1.400057e-02 1.001940e-01 6.570250e-01
## X201516_at 1.022835e+00 4.000156e-04 2.622462e+00 3.005898e-02 5.695214e+00
## X201527_at 1.589115e+00 1.522260e+00 9.828174e-03 7.082300e-01 1.680657e-01
## X201531_at 6.947745e-01 8.943353e-01 2.005593e+00 1.083870e-01 1.458711e+00
## X201577_at 2.440628e-01 5.801029e-03 2.284470e-01 2.128415e-02 2.744179e+00
## X201584_s_at 1.179160e+00 1.990197e+00 7.700631e-01 7.403806e-02 4.949741e-01
## X201656_at 8.104082e-01 1.282114e-01 2.362433e-02 1.398436e+00 8.862409e-06
## X202541_at 4.864087e+00 7.604159e-02 4.177585e+00 2.965157e+00 3.929119e-01
## X202737_s_at 8.756434e-02 6.765928e-01 2.767062e-01 2.933607e-01 3.053892e-01
## X202861_at 5.918746e-02 2.078748e+00 4.682138e-01 2.367518e+00 2.521092e-02
## X202940_at 5.641237e+00 1.164290e+00 1.273287e-02 3.941591e+00 1.225594e-01
## X202963_at 1.541436e+00 4.700757e-01 1.230629e+00 5.534676e-01 8.635521e-04
## X203316_s_at 2.287497e-01 1.373903e-04 9.235137e-01 3.003106e-02 1.211018e+00
## X203554_x_at 3.974403e-01 8.328739e-04 2.467216e-02 6.922666e-01 9.523274e-02
## X203755_at 5.218454e-03 2.586768e-01 4.241450e-01 6.779173e-01 2.516428e-01
## X204018_x_at 4.168825e-02 1.505374e-02 9.652541e-03 5.714431e-04 6.564760e-03
## X204301_at 1.053439e+00 3.615780e-01 3.001432e+00 3.206718e+00 5.686432e+00
## X204428_s_at 3.312807e-01 4.163148e-01 1.592293e-01 3.232339e-01 2.151416e-02
## X204641_at 6.876650e-02 4.278562e-01 9.859643e-01 3.827574e-01 3.121752e-02
## X204977_at 4.304917e-02 5.422490e+00 1.474299e-01 7.734397e-02 1.419250e+01
## X205019_s_at 2.345741e-02 2.142329e-01 1.405260e-01 9.761808e-01 4.768050e-01
## X205086_s_at 3.198504e+00 5.454116e+00 1.850785e+00 2.073397e+00 5.691741e-01
## X205298_s_at 7.510067e-01 3.485656e-01 9.533875e+00 1.886251e-01 1.552322e+00
## X205306_x_at 8.996331e-01 8.192635e-02 1.559240e-04 9.308583e-01 3.460471e-01
## X205392_s_at 1.715847e+00 1.298249e+00 1.602098e-01 3.143451e-03 2.957464e-01
## X205440_s_at 8.106100e-01 1.119180e-01 7.786564e-02 7.116465e-01 6.758176e-02
## X205531_s_at 3.836741e+00 3.861937e-02 1.103690e+00 1.576073e-01 1.008201e-02
## X205554_s_at 3.457836e-01 2.129991e-01 7.051393e-03 2.708384e-01 2.991982e-01
## X205740_s_at 2.196798e+00 3.055250e+00 4.993620e-02 1.597422e+00 1.249509e+00
## X205819_at 3.415621e-01 7.980071e-01 1.539211e-01 1.215286e-02 2.030302e-01
## X205858_at 1.373961e-01 2.052282e+00 7.316155e-02 2.729324e-01 1.954680e+00
## X205866_at 2.296632e-01 6.448111e-01 1.957245e-02 7.240674e-03 9.288785e-02
## X205890_s_at 2.908849e+00 1.604288e-02 3.768710e-01 4.511618e-01 1.051908e+00
## X205911_at 1.214388e-02 1.852883e+00 1.252748e-01 2.674401e+00 2.087634e+00
## X206380_s_at 9.057434e-03 8.853746e-01 7.872520e-02 7.593584e-04 1.093935e+00
## X206453_s_at 2.143361e+00 2.847308e-03 6.347022e-01 2.200765e+00 5.841591e-02
## X206643_at 6.671811e-02 4.427413e-02 4.237434e-01 2.390159e-04 1.248582e+00
## X206680_at 1.523490e+00 1.610811e+00 5.061311e-01 1.417203e-01 1.255486e+00
## X207076_s_at 1.462070e+00 9.146604e-01 2.517277e-01 1.594079e-01 2.414266e-02
## X207218_at 2.642953e-01 4.609512e-02 3.951640e-01 9.321560e-01 1.592422e-01
## X207262_at 8.321438e-02 4.710388e-01 1.409361e-02 5.064417e-02 1.894244e+00
## X207330_at 3.181191e+00 3.756267e+00 1.067300e+01 7.474379e-01 6.943477e-01
## X207609_s_at 1.266164e-01 2.169067e-01 6.699962e-02 3.962023e-01 5.268891e-01
## X207804_s_at 1.197805e-02 1.199825e-01 4.233996e-05 5.917852e-02 6.240474e-01
## X207828_s_at 3.334150e-02 2.914194e-02 2.054862e-01 4.619164e-01 1.040485e-03
## X207995_s_at 1.156881e-02 7.204763e-01 1.266993e-01 4.971251e-01 7.125966e-01
## X208079_s_at 1.943000e-04 3.248491e-01 1.987944e-01 4.884760e-01 1.317041e+00
## X208147_s_at 1.491193e-03 5.568176e-02 9.180993e-02 6.559912e-01 5.090267e-01
## X208816_x_at 4.641318e-02 2.149201e+00 3.717258e-01 1.903491e+00 4.377407e+00
## X209189_at 1.768303e-01 3.204731e-01 6.571076e-02 1.196541e-03 8.375049e-02
## X209219_at 1.714766e-03 2.599380e-02 2.916472e-01 3.156081e-02 7.623444e-01
## X209335_at 2.647685e-01 7.365184e-01 1.972256e+00 3.414118e-01 2.210677e+00
## X209365_s_at 7.568951e-03 6.176216e-04 8.835014e-01 9.755713e-01 4.535405e-01
## X209447_at 2.238456e-02 5.533484e+00 3.668504e-01 2.902617e-01 4.048413e-03
## X209458_x_at 3.562564e-02 7.094969e-02 6.711618e-03 9.131892e-05 2.755602e-02
## X209821_at 4.297855e+00 3.555046e-02 2.025275e-01 7.653758e+00 1.598620e+00
## X209825_s_at 9.939232e-01 2.740777e-02 3.695993e-01 4.612235e-01 1.781459e-01
## X210095_s_at 2.549793e+00 5.639475e-03 1.285738e-01 1.679802e+00 3.123909e-04
## X210481_s_at 4.679579e-01 1.724554e-04 1.301911e-02 1.078253e+00 7.798153e-04
## X210909_x_at 6.866385e-02 4.487487e-01 4.847942e+00 9.443153e-02 1.231882e+00
## X211023_at 1.620984e-01 1.045924e+01 3.306993e+00 1.753448e-02 1.972293e+00
## X211378_x_at 1.583770e-01 1.027241e-01 5.213911e-01 9.267841e-02 1.411264e-01
## X211628_x_at 8.352171e-01 1.763689e-02 1.969160e+00 2.161338e+00 2.962705e-01
## X211699_x_at 2.326735e-02 1.492151e-03 1.950931e-03 1.188761e-02 6.592456e-03
## X211745_x_at 5.560401e-02 1.926395e-02 1.411560e-03 4.933581e-04 1.741735e-02
## X211765_x_at 2.060505e-01 4.615335e-02 4.676688e-01 1.037235e-01 1.241690e-01
## X211978_x_at 5.788728e-02 6.946663e-02 2.765223e-01 2.980964e-01 1.975620e-01
## X212149_at 2.564004e+00 4.277748e-01 7.761240e-01 2.842972e-01 3.183147e+00
## X212551_at 1.489655e-03 6.919862e-04 1.497857e-04 2.288748e-03 1.430832e+00
## X212554_at 4.931620e-03 2.128381e-01 5.426160e-01 8.743600e-04 8.927028e-01
## X212661_x_at 1.841567e-01 6.111946e-03 5.622460e-01 4.561843e-02 2.456273e-01
## X213068_at 2.367408e+00 6.605870e-01 5.344720e-02 1.263738e+00 1.780803e+00
## X213629_x_at 3.159034e+00 5.475685e-01 5.095059e-01 1.753871e+00 5.576171e-03
## X214414_x_at 4.652395e-06 1.748052e-02 2.447041e-03 7.101532e-02 2.343617e-02
## X214421_x_at 8.038710e-01 9.099024e-02 2.525272e-01 2.908335e-04 1.627930e-05
## X214710_s_at 5.141869e-02 1.265763e-02 4.581867e-01 6.437748e-01 1.222350e-02
## X215138_s_at 3.631960e-01 4.251059e+00 1.154301e+01 3.576782e-01 7.272220e-01
## X215330_at 2.341945e+00 9.153787e-01 1.467208e+00 1.347511e+01 4.318200e+00
## X215768_at 5.264545e+00 6.109804e-01 1.040127e+00 5.008077e-02 3.091693e+00
## X216025_x_at 8.219595e-01 8.860021e-02 2.677029e-01 1.314562e-03 8.343458e-03
## X216661_x_at 9.585666e-01 2.040541e-01 3.027615e-01 3.615334e-02 9.793292e-03
## X216782_at 3.552005e-02 7.837364e+00 2.534347e-01 2.270943e+00 2.303004e+00
## X217165_x_at 3.661383e+00 4.585042e-01 2.319222e-01 1.757163e+00 2.154184e-03
## X217319_x_at 3.415507e-01 1.125160e-01 5.228044e-02 2.202156e-02 2.379995e-01
## X217414_x_at 1.083607e-02 1.305440e-02 2.479408e-06 5.136730e-02 2.318203e-02
## X217521_at 8.597337e-02 2.805804e-02 7.516254e-01 1.927413e-02 2.849569e-01
## X218002_s_at 3.503417e-01 1.297288e-01 1.135956e-01 2.728528e-01 6.304773e-02
## X218061_at 1.082554e-06 1.314258e+00 1.288225e+00 1.011341e-01 2.079579e-03
## X219485_s_at 3.113752e-01 7.686929e-02 4.918383e-01 1.515370e-02 1.569784e-02
## X219787_s_at 4.759700e-02 2.055286e-02 6.758266e-01 4.871324e-02 8.117000e-02
## X220017_x_at 7.845741e-01 1.125737e-01 2.647461e-01 4.113958e-03 2.113402e-02
## X220114_s_at 6.049428e-01 3.241175e-04 3.516488e-02 4.167914e-01 1.185524e-01
## X220116_at 7.860544e-01 7.821188e-02 5.310546e-01 1.564331e+00 2.023108e-01
## X220148_at 1.337861e-01 7.197463e-01 2.395113e-01 2.567856e+00 5.106117e-01
## X220491_at 6.102491e-02 2.243181e-01 1.459275e-02 3.130341e-01 3.310256e+00
## X220496_at 6.545586e-01 6.155192e-01 2.702671e-01 1.047502e-02 4.680273e-01
## X36829_at 7.391617e-01 1.994428e+00 4.729962e-01 4.866851e-02 4.814771e-02
## Dim.26 Dim.27 Dim.28 Dim.29 Dim.30
## X200606_at 0.4237713144 7.312349e-01 5.844880e+00 1.795726e-01 1.579108e+00
## X200734_s_at 0.1745484716 6.577980e-01 5.803275e-01 3.373374e+00 2.291310e-02
## X200882_s_at 0.5829852775 1.210450e+00 6.732288e-02 6.529315e+00 3.126971e-01
## X200910_at 0.2467975528 3.909967e-02 5.188343e-01 1.085051e+00 1.430479e-02
## X200954_at 2.7970936784 8.484777e-01 2.587205e+00 8.543861e-01 3.650266e+00
## X201128_s_at 0.2009500556 4.096502e-01 7.657783e-02 5.732509e-01 5.865327e-01
## X201184_s_at 1.4856368600 2.685654e-01 1.348128e+00 5.589373e-01 1.934408e-02
## X201293_x_at 0.0533172916 1.179267e-03 4.176440e-01 1.783913e-01 3.913116e-01
## X201398_s_at 1.4755925166 9.967582e-01 3.488809e+00 7.503690e-02 1.937390e+00
## X201441_at 0.0001161261 4.391310e-01 1.230216e+01 8.626773e-02 2.887207e-02
## X201453_x_at 0.0209991854 2.226820e+00 1.952724e+00 1.249356e-03 4.239170e+00
## X201516_at 0.5957718013 9.331732e-02 6.477083e-01 1.240261e+00 6.473995e-01
## X201527_at 5.1256071453 5.882273e+00 1.243649e+00 1.735349e+00 6.237412e-01
## X201531_at 0.0003514507 3.465320e-02 1.699254e-01 4.990593e-02 4.698425e-01
## X201577_at 0.9139695787 2.979922e-01 7.829687e-04 1.439681e-03 1.741021e-01
## X201584_s_at 0.0129702842 1.307518e+00 1.516116e-02 4.073391e-03 3.329926e-02
## X201656_at 3.7737046187 1.505807e+00 6.996514e-01 7.534993e-01 1.328109e-01
## X202541_at 0.7349284393 3.486037e-04 7.231743e-02 1.889981e-01 1.611442e+00
## X202737_s_at 0.3850658268 2.821086e+00 2.367469e+00 3.284970e+00 6.746288e-02
## X202861_at 1.2666961664 7.954024e-01 1.612503e+00 2.810452e-01 1.192190e+00
## X202940_at 9.2395839107 1.425452e-02 2.161991e-01 2.922678e+00 4.865430e+00
## X202963_at 0.0607835080 9.816060e-01 5.253255e-01 2.518073e+00 2.216154e+00
## X203316_s_at 0.3265349708 3.899027e-01 1.148071e-03 9.800655e-02 2.167866e-02
## X203554_x_at 1.2977003796 1.382181e-01 3.362071e-01 1.293928e-01 2.928748e-02
## X203755_at 0.1031356897 1.036380e-02 2.589979e-01 5.251154e-01 3.057019e-01
## X204018_x_at 0.0603686095 1.839181e-03 7.046351e-02 1.341213e-03 8.203326e-04
## X204301_at 1.3983926630 9.290230e+00 9.788690e-01 6.917661e+00 8.239327e+00
## X204428_s_at 0.0361326164 1.665864e-01 1.362920e-01 1.160094e-01 8.128593e-01
## X204641_at 0.3272587866 2.378729e-01 3.267651e-01 3.126848e-02 3.434936e-01
## X204977_at 0.2492486450 1.091487e+01 2.371016e-01 4.793957e-04 1.402416e+01
## X205019_s_at 0.3647126831 7.917794e-01 1.611179e-02 8.049876e-02 2.290903e-01
## X205086_s_at 4.7716074484 1.346879e-01 1.999735e-01 1.162203e+01 2.814474e+00
## X205298_s_at 0.9321451730 1.845516e+00 4.383412e-02 7.605544e-01 1.528954e-01
## X205306_x_at 0.1727325928 3.757239e-01 2.536557e+00 3.860496e+00 5.874244e-01
## X205392_s_at 0.2357471047 1.590161e-01 3.482142e-01 9.633222e-01 1.569120e-01
## X205440_s_at 0.7590501815 5.645660e-02 9.527919e-01 3.042697e-02 1.635312e-02
## X205531_s_at 0.2051449984 7.511685e-04 4.535397e+00 9.470285e-01 6.525439e-02
## X205554_s_at 0.3374581963 1.103989e-01 1.036431e-01 6.190501e-03 5.692272e-01
## X205740_s_at 0.0632831902 3.641993e+00 4.174801e+00 2.215972e-01 1.297926e+01
## X205819_at 0.3796072744 8.239320e-02 7.774722e-03 1.154475e+00 8.687220e-03
## X205858_at 0.1419033491 1.758808e+00 5.030387e-01 6.706421e-01 1.010784e+00
## X205866_at 0.0055702356 5.139166e-02 1.072403e-01 1.699303e-01 9.358034e-03
## X205890_s_at 1.4079299076 3.500070e+00 5.062383e+00 2.665515e-01 2.289314e+00
## X205911_at 0.4900046620 1.388119e-01 4.483368e-03 1.714950e+00 2.555383e-01
## X206380_s_at 0.5419211497 1.698746e+00 1.532313e-01 3.853300e-01 2.672488e-01
## X206453_s_at 0.0925913541 1.094319e-01 1.547601e-01 7.873831e-01 7.894589e-02
## X206643_at 0.6318709310 5.110917e-01 6.109949e-02 4.559798e-04 1.112119e-02
## X206680_at 0.1244246753 2.080340e-01 4.594745e-01 4.301244e-02 6.250741e-02
## X207076_s_at 0.3151189451 7.992457e-01 9.394783e-01 5.280479e-01 3.791119e-01
## X207218_at 1.9410339244 2.486920e-03 4.056729e+00 3.702251e-03 1.357300e-01
## X207262_at 0.0486790092 3.778146e-03 2.760809e-03 3.087287e-01 1.768581e-01
## X207330_at 8.3712360270 8.222003e-01 9.105565e-01 2.995209e+00 1.234155e-01
## X207609_s_at 0.0121434294 8.706120e-01 3.543978e-02 1.167851e-01 6.032754e-02
## X207804_s_at 0.3946162672 7.407264e-02 1.349468e-01 1.728546e-01 1.891862e-02
## X207828_s_at 0.0053518150 4.220716e-01 3.433322e-02 3.574647e-01 9.628867e-01
## X207995_s_at 1.0596781462 1.250373e-01 1.336928e-03 3.317190e+00 2.600279e-01
## X208079_s_at 0.2751324470 4.804053e-01 1.162978e+00 6.126240e-01 4.130106e-01
## X208147_s_at 0.6218994848 2.360450e+00 1.487042e-01 7.803375e-02 3.953773e-01
## X208816_x_at 0.0285357553 4.339802e-02 1.321351e-01 1.329604e-01 6.709193e-02
## X209189_at 0.5336853291 3.060538e-01 1.109385e-01 1.911499e-02 6.341598e-03
## X209219_at 0.2832172162 1.731503e-02 6.079786e-01 3.994170e-01 1.005935e-02
## X209335_at 0.2616608635 3.154969e-01 4.804142e-01 5.181762e-01 3.527556e-02
## X209365_s_at 0.1469021060 1.107374e-01 1.697700e-01 1.083985e-02 3.331903e-02
## X209447_at 0.0004041616 3.534949e+00 2.698041e-01 2.834937e+00 2.831937e-01
## X209458_x_at 0.0159466091 1.457964e-03 4.075691e-02 1.605681e-02 1.530277e-02
## X209821_at 4.5504507468 1.372829e+00 3.736385e+00 1.997273e-01 5.084768e+00
## X209825_s_at 1.3442616135 4.752325e-01 1.019430e-01 2.289603e-02 3.180402e-01
## X210095_s_at 4.1087444900 9.388593e-02 5.706799e+00 1.636365e+00 1.517892e+00
## X210481_s_at 1.4705304355 4.221133e-01 1.713579e-01 1.563913e+00 1.309921e+00
## X210909_x_at 0.1229115305 1.070068e+00 1.020198e-01 1.068144e+00 1.391882e-03
## X211023_at 3.3054904593 1.813891e-01 3.603147e+00 5.124832e-01 1.005400e-02
## X211378_x_at 0.0178973116 4.996635e-03 2.136958e-01 3.859797e-01 2.331341e-01
## X211628_x_at 1.1665583140 4.589309e+00 1.122072e+00 1.502380e+00 8.945933e-02
## X211699_x_at 0.0895658440 7.124184e-02 4.139981e-02 6.576617e-03 5.584455e-03
## X211745_x_at 0.0097714804 1.457368e-03 3.542545e-02 8.579176e-03 2.615721e-02
## X211765_x_at 0.0463596381 6.792575e-03 2.931233e-01 1.684076e-01 2.508587e-01
## X211978_x_at 0.1098953290 2.891980e-02 4.477984e-01 1.311753e-01 4.174538e-01
## X212149_at 2.8714466105 5.806803e-02 3.065226e-02 1.673966e+00 3.103506e-02
## X212551_at 0.4740101677 3.231686e-01 4.398723e-01 3.505442e-01 3.569405e+00
## X212554_at 0.2210808946 6.800450e-01 5.414298e-02 3.159956e-02 3.870552e+00
## X212661_x_at 0.0180061089 1.148039e-02 3.736437e-01 6.226522e-02 5.048693e-01
## X213068_at 0.1914658842 1.586915e-01 2.722320e-01 1.685380e-02 2.635135e-02
## X213629_x_at 2.7787848609 2.640254e-01 1.558384e-01 6.574069e-01 3.237723e-01
## X214414_x_at 0.0045025496 3.538005e-03 9.930711e-03 5.615644e-03 1.327142e-02
## X214421_x_at 0.2104451101 5.284632e-01 3.262680e-01 2.749181e-01 1.413380e-03
## X214710_s_at 1.4645370175 2.836832e-03 1.456004e-02 1.136758e+00 1.918284e-02
## X215138_s_at 3.1573982381 4.390565e+00 1.625528e+00 8.145873e-01 3.310573e+00
## X215330_at 0.2478623314 6.482475e-01 1.051169e-01 1.131405e+00 7.246248e-02
## X215768_at 0.9412795798 6.345309e+00 3.961837e-01 8.207221e+00 1.946262e-01
## X216025_x_at 0.1779240682 9.965873e-01 2.592881e-01 1.813658e-01 4.078789e-05
## X216661_x_at 0.0899647446 5.924491e-01 1.313518e-01 5.242986e-01 4.909574e-02
## X216782_at 0.0026839472 3.112598e+00 2.263028e-01 3.221236e+00 7.115998e-02
## X217165_x_at 1.8836219693 3.233883e-01 1.763088e-01 9.132412e-01 5.455067e-01
## X217319_x_at 0.4165411711 3.957582e-02 4.975215e-02 2.624610e-04 1.281643e+00
## X217414_x_at 0.0182168543 3.309811e-02 7.446615e-02 4.788636e-03 4.835602e-02
## X217521_at 0.2898715123 4.829073e-01 3.323192e-01 7.936169e-02 4.156558e-01
## X218002_s_at 0.0416822809 3.052051e-02 7.369504e-01 3.519734e-01 1.062183e-01
## X218061_at 0.0790517605 3.040167e-01 2.040747e-01 2.859088e-01 5.198271e-01
## X219485_s_at 0.4529702333 1.799043e-02 6.336099e-01 8.156708e-01 2.613968e-01
## X219787_s_at 0.0012147215 4.492923e-02 6.368483e-03 2.083959e-03 3.905627e-02
## X220017_x_at 0.1233340726 9.334336e-01 2.647412e-01 2.119784e-01 6.073269e-05
## X220114_s_at 0.2019298593 4.100082e-02 1.494137e-02 8.989666e-01 2.610935e-02
## X220116_at 0.1293409616 1.204862e+00 8.955856e-01 7.980210e-02 2.245667e-01
## X220148_at 2.7234372805 1.132817e-01 4.277587e+00 2.496439e-01 1.032632e+00
## X220491_at 4.5297851738 1.736771e+00 2.302292e+00 1.184330e-01 1.144224e-01
## X220496_at 0.0007553940 5.882609e-02 3.806437e-01 8.908970e-02 9.990029e-02
## X36829_at 0.5714573851 2.291473e-02 1.889265e+00 7.140794e-04 4.283687e-01
## Dim.31 Dim.32 Dim.33 Dim.34 Dim.35
## X200606_at 1.179215e+00 1.323273691 3.213174e+00 6.628919e-01 0.010764614
## X200734_s_at 1.226939e+00 5.526814540 3.075034e-01 1.683497e+00 0.448294133
## X200882_s_at 2.387775e+00 1.796698245 9.156933e-01 4.542331e-02 4.677770275
## X200910_at 1.259948e+00 1.241688987 4.282800e-01 1.008274e-04 2.144480764
## X200954_at 4.516464e+00 0.446906966 8.064695e-01 2.216874e-03 0.001391748
## X201128_s_at 2.337991e+00 2.377672642 1.795484e-01 1.631242e-02 0.003978602
## X201184_s_at 2.921774e-01 5.255151747 6.422055e-01 2.732645e+00 1.915452903
## X201293_x_at 6.199025e-03 0.122105452 4.369592e-01 8.887073e-03 0.381044263
## X201398_s_at 5.914199e-02 0.099436203 1.628310e+00 2.095443e+00 0.082849660
## X201441_at 3.855944e-01 4.788669857 7.854146e-01 8.072102e-01 0.719453271
## X201453_x_at 1.756123e+00 1.545460575 4.015210e-01 7.080616e+00 0.152317501
## X201516_at 1.234310e+01 1.607516265 5.639638e-01 5.140611e-02 1.274831482
## X201527_at 8.824832e-01 2.380557584 6.265877e-03 1.203594e+00 1.271081733
## X201531_at 2.859347e+00 0.004809709 5.993898e-01 2.926993e+00 1.651450886
## X201577_at 5.981639e-01 0.019313393 3.119843e-01 7.064300e-02 0.014074512
## X201584_s_at 8.959176e-02 0.330004673 1.645863e+00 3.960308e+00 0.043797852
## X201656_at 4.495359e-03 8.056939050 2.739853e-02 7.243553e-02 0.320806901
## X202541_at 4.106951e+00 0.625649229 2.249057e+01 2.212417e+00 0.114224652
## X202737_s_at 2.147763e-01 1.759974622 9.026918e-01 1.589288e+00 2.790564279
## X202861_at 9.722932e-04 0.806307523 3.682808e-01 1.745028e+00 0.009637674
## X202940_at 1.530864e-01 2.648005247 4.586430e-01 1.017486e+00 0.110461550
## X202963_at 3.100620e-02 0.688583025 6.794996e-01 5.246805e-01 0.525143914
## X203316_s_at 8.694728e-02 0.077254159 5.084569e-01 4.620640e-01 0.297458429
## X203554_x_at 2.144843e-01 0.034387827 3.098807e-01 3.509112e-01 1.509391946
## X203755_at 1.001806e-01 0.238522386 2.721939e-02 1.407358e-01 1.826423293
## X204018_x_at 8.319284e-02 0.217146608 3.638855e-02 5.807798e-05 0.005921790
## X204301_at 3.044184e-02 2.508848516 1.700273e+00 1.394058e+00 0.247651433
## X204428_s_at 9.961959e-03 0.404197827 1.343615e-01 3.480961e-01 0.419804038
## X204641_at 2.326059e-01 0.693060756 4.845488e-02 3.531578e-02 1.169055335
## X204977_at 9.154711e-02 0.120085415 4.574899e+00 2.808193e-02 2.429556877
## X205019_s_at 2.287140e-01 0.033798262 1.609253e-02 1.695442e-01 0.003638407
## X205086_s_at 3.044063e-04 5.179731663 8.777546e+00 8.498298e-01 1.310009739
## X205298_s_at 1.103036e+00 2.507759884 5.464594e+00 8.672047e-02 0.011161562
## X205306_x_at 6.330126e-02 1.697705820 4.572030e-01 7.207235e-02 1.652486555
## X205392_s_at 4.692352e-02 0.946167387 1.010483e+00 2.210203e-01 0.400154974
## X205440_s_at 1.586063e-01 0.506349478 5.579137e-02 7.977413e-01 2.377599788
## X205531_s_at 2.353341e-03 1.086864808 7.512035e-01 8.289825e-01 0.004138677
## X205554_s_at 1.448547e-01 0.137291788 8.636277e-02 7.008939e-06 0.238366672
## X205740_s_at 8.952217e-01 1.494393068 1.322810e+00 9.061263e-01 0.342640592
## X205819_at 5.242869e-01 0.025714728 1.080189e+00 3.273663e+00 0.208098211
## X205858_at 2.168959e+00 0.167447996 2.479802e+00 2.120696e+00 0.296677177
## X205866_at 3.015770e-01 0.353680067 5.191168e-02 2.193988e-01 0.066591518
## X205890_s_at 7.261385e-01 0.365009380 4.922196e-01 9.195352e-01 0.540274630
## X205911_at 1.709988e+00 0.003191478 2.300024e-01 1.916610e-01 0.815666747
## X206380_s_at 3.764440e-01 0.328308324 9.481188e-01 2.037949e-02 0.174590013
## X206453_s_at 7.053258e-01 0.470455515 1.571764e+00 1.161394e+00 0.122678122
## X206643_at 1.172714e-02 0.070546914 4.364846e-01 1.543790e-02 0.008304417
## X206680_at 1.656782e+00 0.008372824 3.427334e-02 7.329237e-02 0.278887725
## X207076_s_at 7.679228e-02 0.721266730 1.828692e-01 5.037724e-01 0.604726315
## X207218_at 1.118356e-01 0.974115304 6.436484e-03 1.031201e-01 0.898775055
## X207262_at 1.820907e-02 0.170725888 9.006747e-02 7.811996e-01 0.026618212
## X207330_at 1.322247e+00 1.572119956 8.056617e+00 1.390231e+00 0.139407629
## X207609_s_at 5.221480e-02 0.526595106 8.317204e-03 1.634407e-01 0.345676074
## X207804_s_at 3.406151e-01 0.003147445 8.546954e-02 9.189182e-02 0.022235151
## X207828_s_at 4.695550e-01 0.299697528 1.471947e-05 5.682849e-02 0.714895188
## X207995_s_at 4.786189e+00 0.002142542 1.101324e-05 2.666386e-02 0.167064673
## X208079_s_at 7.132461e-01 3.107080114 3.241980e-02 4.037510e-01 0.176061523
## X208147_s_at 8.252771e-02 1.291339784 1.444303e-01 8.907695e-01 3.476275447
## X208816_x_at 7.066296e-01 0.004884472 8.552127e-02 3.584911e-01 2.107457916
## X209189_at 1.789574e-01 0.010735488 1.140193e+00 1.290039e+00 0.621939872
## X209219_at 1.426914e+00 0.049385719 6.218426e-01 5.048061e-02 0.688933863
## X209335_at 2.583639e-01 0.162095367 2.236000e-01 1.186655e-01 3.411954440
## X209365_s_at 4.657962e-02 0.430141218 1.720333e-02 3.449129e-03 0.012606311
## X209447_at 1.262067e-01 0.888375043 1.379524e+00 3.783687e-03 0.010328300
## X209458_x_at 1.822104e-03 0.045716785 6.030457e-02 4.647262e-03 0.034094811
## X209821_at 1.224480e-01 1.345175844 1.047878e-02 8.780396e-01 1.555490463
## X209825_s_at 1.134403e-02 0.262213614 8.615249e-03 5.810403e-01 1.707981761
## X210095_s_at 2.559476e+00 0.066460347 1.862222e+00 7.477052e-02 6.359304162
## X210481_s_at 3.635183e+00 0.150692395 1.148766e-01 1.410112e-01 2.186926440
## X210909_x_at 2.840521e-01 3.953229395 4.257455e-01 3.269922e-01 0.799341434
## X211023_at 1.979815e-01 0.587631141 4.446931e-01 4.345446e-03 0.512272815
## X211378_x_at 4.856474e-02 0.110002028 2.887018e-01 5.808882e-04 0.187485603
## X211628_x_at 4.089362e+00 1.230762049 2.473970e-01 1.130015e+01 5.280190968
## X211699_x_at 1.473275e-02 0.102574542 1.867649e-02 2.688696e-03 0.004817903
## X211745_x_at 1.337134e-03 0.073135105 1.332563e-02 3.453451e-03 0.023191616
## X211765_x_at 2.743668e-02 0.142765777 5.066408e-01 1.279625e-02 0.442191746
## X211978_x_at 1.872729e-01 0.062585054 3.613264e-01 3.082942e-02 0.263303197
## X212149_at 8.610529e-04 1.780890495 1.697424e-01 4.469646e-02 0.662476016
## X212551_at 2.292048e+00 0.077691258 2.758461e-02 1.677616e+00 0.218552363
## X212554_at 6.688526e-01 0.118981548 1.597105e-02 1.093714e+00 0.001697583
## X212661_x_at 2.513326e-02 0.052620644 3.521288e-01 1.390666e-02 0.374316079
## X213068_at 8.628225e-01 0.577203273 1.786506e-01 9.085395e-03 0.385008627
## X213629_x_at 5.024222e-04 0.948197785 2.473730e-02 1.573891e+00 7.104792480
## X214414_x_at 1.034160e-02 0.236121460 1.253111e-02 2.762719e-01 0.003889792
## X214421_x_at 6.126412e-02 0.042380082 2.143329e-01 3.255483e-01 0.113586630
## X214710_s_at 3.253778e-08 0.161333380 1.512278e+00 3.515253e-01 1.050738111
## X215138_s_at 3.418084e+00 0.013530470 3.909931e+00 1.547281e-01 1.241685025
## X215330_at 3.803719e+00 0.884489680 4.683592e-03 1.018182e+01 0.506230998
## X215768_at 1.180765e+00 1.385847000 2.747392e-01 1.827707e+00 4.661211373
## X216025_x_at 5.033606e-02 0.048066725 3.789023e-01 3.312959e-01 0.119296768
## X216661_x_at 3.201909e-02 0.059917010 3.354533e-01 2.017433e-01 0.175123437
## X216782_at 4.226001e+00 0.243863767 1.684189e-01 3.195654e+00 0.732198183
## X217165_x_at 1.229604e-01 0.639580357 1.447483e-01 1.205332e+00 7.321700415
## X217319_x_at 4.999079e-01 0.149448967 9.408645e-03 7.617030e-02 2.819373225
## X217414_x_at 2.075279e-02 0.107303205 3.674706e-03 2.953085e-02 0.011668332
## X217521_at 2.524971e-02 0.257673496 8.110083e-02 4.767746e-02 0.013407102
## X218002_s_at 5.081821e-01 0.009362032 7.840826e-03 2.820714e-01 0.107369299
## X218061_at 8.634662e+00 0.012729450 4.369848e-01 2.363992e-02 0.419463035
## X219485_s_at 5.349590e-01 7.278124049 4.881033e-03 7.521579e+00 0.313279492
## X219787_s_at 2.024858e-01 0.020734071 5.791146e-02 1.089980e-04 1.060628404
## X220017_x_at 9.550049e-02 0.018796124 2.251727e-01 3.844838e-01 0.082307235
## X220114_s_at 4.513081e-01 0.335133185 2.087129e-01 2.818442e-02 0.444916127
## X220116_at 8.557567e-01 1.230400527 2.640958e+00 3.339889e-01 0.324466537
## X220148_at 3.922813e-01 0.830824172 2.841669e-02 7.264082e-02 0.223912290
## X220491_at 4.325138e-02 0.518321081 4.689992e-01 3.007578e+00 1.199582494
## X220496_at 5.158544e-02 0.004536222 4.134592e-01 7.661660e-02 0.104254495
## X36829_at 6.648608e-01 0.481274597 8.436901e-01 8.569239e-01 0.000217330
## Dim.36 Dim.37 Dim.38 Dim.39 Dim.40
## X200606_at 0.0110036432 9.406449e-02 2.628652e-02 2.930255e-01 1.730066e+00
## X200734_s_at 2.5128031616 1.034439e-01 5.903654e-01 1.173528e+00 5.473145e-01
## X200882_s_at 2.2955554240 2.929731e-01 1.234230e-01 1.109986e+00 5.286632e-01
## X200910_at 0.2656489839 2.982866e-01 2.343811e-01 3.216122e-01 4.052498e-01
## X200954_at 1.0935351185 2.568400e-01 3.018019e+00 1.572685e-03 7.754734e-02
## X201128_s_at 2.0748388858 6.050385e-02 1.049945e-01 3.505739e-01 1.348782e+00
## X201184_s_at 1.7286421883 2.427473e+00 4.963932e-01 1.735560e-01 2.860286e-01
## X201293_x_at 0.1720236292 2.132238e-01 1.805073e-01 2.910674e-02 2.179836e-01
## X201398_s_at 0.6404160973 1.083704e+00 5.613748e-01 7.025169e-02 7.447613e-01
## X201441_at 0.5518435056 9.487102e-01 3.889857e-01 1.426489e-03 8.145989e+00
## X201453_x_at 1.5763411592 3.831051e-02 4.555515e-05 6.321072e-01 2.422603e-02
## X201516_at 0.0114249848 1.119462e-01 2.840329e-01 1.036797e-01 4.341578e-01
## X201527_at 2.0177975610 6.187590e+00 2.094182e-01 1.624310e+00 1.881377e+00
## X201531_at 2.1337286135 5.101744e-03 1.783681e+00 4.102954e+00 5.866670e+00
## X201577_at 1.8440246022 3.145945e-01 4.500559e-01 2.263324e-01 1.313530e+00
## X201584_s_at 0.0002926152 3.785593e-01 4.643128e-02 3.198030e+00 2.586577e-02
## X201656_at 2.7951586242 6.299909e-01 2.067973e+00 2.185817e-01 5.950057e-03
## X202541_at 0.0189794392 6.253255e-01 6.655359e-03 3.167856e+00 2.022569e-03
## X202737_s_at 2.1828408869 1.256414e+00 1.610402e+01 4.003736e+00 1.515350e+00
## X202861_at 0.1523463494 2.978895e+00 6.045856e-01 2.487275e-01 5.227380e-02
## X202940_at 1.0457188402 4.594410e-01 2.277890e-01 2.924798e-01 2.760302e-01
## X202963_at 0.2412070250 2.584335e-01 9.622961e-04 5.477234e-01 9.198021e-01
## X203316_s_at 0.1958780973 5.157241e-02 7.100838e-02 3.292910e+00 1.517567e+00
## X203554_x_at 0.0000906880 2.938736e-02 4.782079e-02 3.482955e-02 1.181904e-01
## X203755_at 0.0611066961 8.258755e-02 7.403431e-02 1.624644e-02 1.505378e+00
## X204018_x_at 0.0497644964 1.460947e-03 6.072741e-08 4.950123e-04 6.768122e-02
## X204301_at 0.2664129961 1.663075e+00 7.693183e+00 1.858343e-02 2.606453e+00
## X204428_s_at 1.2342211541 7.397832e-01 6.894385e-02 2.753504e-02 7.911459e-03
## X204641_at 2.9270251433 4.628495e-01 3.102312e-01 1.217357e-01 1.444033e-01
## X204977_at 0.0094263361 1.144433e+00 5.540674e-02 6.895881e-02 8.441098e-01
## X205019_s_at 0.0055322224 3.706208e-01 9.553173e-02 7.806605e-02 1.906588e-02
## X205086_s_at 0.3649715588 8.458974e-01 2.960292e-02 6.844953e-01 1.809185e+00
## X205298_s_at 0.3118374237 3.002006e+00 9.193659e-01 1.101246e-01 7.723991e-01
## X205306_x_at 0.1186220487 2.961271e+00 1.575929e-01 1.102969e+00 4.547044e+00
## X205392_s_at 1.6585425603 1.847381e-01 3.067393e-01 1.006995e-02 4.870124e-01
## X205440_s_at 0.6825399570 4.811804e+00 7.466632e-03 2.172857e-01 5.674679e-01
## X205531_s_at 0.5358428354 9.489043e-01 1.898521e-02 8.880981e-01 7.678647e-02
## X205554_s_at 0.5933914904 1.434271e-02 2.495376e-03 8.303259e-02 2.114041e+00
## X205740_s_at 0.7147151062 2.704333e+00 1.018413e+00 6.155364e-02 1.000116e-01
## X205819_at 5.4281290277 7.379509e-01 1.652628e+00 1.475267e+00 3.235978e+00
## X205858_at 1.0178147108 4.158119e+00 8.044209e-01 4.628913e-02 2.296336e-01
## X205866_at 0.2086595693 2.702691e-01 1.468226e+00 9.400066e-02 4.587605e-03
## X205890_s_at 9.3910034139 3.963269e-02 1.333479e+00 2.280912e+00 7.567006e-01
## X205911_at 0.0162418432 7.248088e-02 9.069695e-01 3.352908e-01 5.122984e-01
## X206380_s_at 4.1708301947 2.751382e-01 4.471377e-02 2.288573e-01 3.237664e-01
## X206453_s_at 0.1742596217 2.530637e+00 2.287102e+00 2.362388e-01 2.902019e-01
## X206643_at 0.2589758106 8.982118e-05 1.002440e-01 1.208790e-01 3.363404e-03
## X206680_at 0.4405015969 5.943894e-02 3.241571e-01 8.729234e-03 1.525418e+00
## X207076_s_at 0.4095700077 3.579354e-03 1.955289e-02 2.139505e-01 5.461018e-01
## X207218_at 0.3804820129 5.916883e+00 1.602499e-01 4.182652e-03 1.442820e+00
## X207262_at 0.6119315818 2.007164e+00 1.178573e+00 6.901078e-01 1.435087e+00
## X207330_at 0.2154174409 3.078608e-01 1.676303e-01 8.827509e-03 4.082925e-01
## X207609_s_at 0.0029344010 2.624009e-01 4.755686e-03 3.182099e-01 1.288968e-03
## X207804_s_at 0.9822895333 7.247476e-01 4.783796e-02 4.391130e-02 9.729001e-01
## X207828_s_at 0.8212574606 1.027365e-01 6.158848e-02 1.095259e-01 1.176647e-01
## X207995_s_at 2.0440676277 8.124280e-02 1.861516e-01 2.337512e-04 5.874882e-01
## X208079_s_at 0.0244241767 3.328062e-01 9.034487e-01 1.705676e-01 1.069877e-01
## X208147_s_at 4.2902337866 1.174218e+00 9.922440e-01 1.070918e+00 1.481318e+00
## X208816_x_at 0.0285359398 8.895855e-02 1.557633e-01 3.320554e-02 1.191034e+00
## X209189_at 3.0904836293 1.564463e+00 3.712821e+00 3.054013e+00 4.063083e+00
## X209219_at 0.6394560466 6.118882e-01 5.324285e-02 5.624480e-01 3.090224e-02
## X209335_at 0.0697360929 5.682572e-03 1.082681e+00 6.730167e-05 2.597711e-01
## X209365_s_at 0.2014070211 2.207517e-01 3.406571e-02 1.709559e-03 7.030483e-02
## X209447_at 2.8714947832 4.385198e+00 3.507761e+00 3.988370e+00 2.183877e+00
## X209458_x_at 0.1469214293 4.832723e-05 2.925561e-02 1.266138e-03 4.612877e-02
## X209821_at 0.8236593908 1.404718e+00 1.091776e+00 5.616323e+00 7.884218e-04
## X209825_s_at 1.4964218010 4.967374e-03 5.639289e+00 2.769455e-01 1.312984e-02
## X210095_s_at 1.3631977811 9.387790e-01 1.867750e-01 3.073564e-02 5.183163e+00
## X210481_s_at 1.4392743576 1.223645e-02 4.385078e-02 7.289500e-01 9.343423e-01
## X210909_x_at 1.9245916192 2.707846e+00 5.152251e+00 5.741824e-01 9.380803e-01
## X211023_at 0.0529705395 1.232908e-03 2.542058e+00 6.502037e-01 9.548080e-02
## X211378_x_at 0.1731384120 1.112904e-01 1.423534e-02 6.030604e-02 8.888858e-02
## X211628_x_at 2.6952214172 8.317025e-01 5.145816e-01 9.451154e-01 9.899572e-01
## X211699_x_at 0.0145099613 2.138551e-03 5.415255e-02 4.056310e-03 7.418143e-03
## X211745_x_at 0.1078590017 6.182656e-02 7.926772e-03 6.662601e-02 5.537691e-05
## X211765_x_at 0.1936714023 2.521534e-01 2.290012e-01 6.184849e-02 2.045307e-01
## X211978_x_at 0.0371103426 3.334871e-07 4.432160e-02 2.469047e-02 2.214839e-01
## X212149_at 0.1862417727 6.410812e+00 1.141194e-01 5.912524e-01 3.446015e-03
## X212551_at 0.1574761033 3.133650e+00 3.149515e+00 1.172998e+00 1.468006e+00
## X212554_at 0.0028855152 3.294544e+00 1.657367e+00 2.272590e-01 5.800493e-01
## X212661_x_at 0.3545984931 6.801689e-02 2.177932e-01 1.516616e-01 2.160003e-01
## X213068_at 0.5932606698 4.257542e-01 3.703581e-01 1.226125e+01 5.396397e-01
## X213629_x_at 1.1340557283 2.054429e-01 1.902489e-01 4.922431e-01 1.333176e-05
## X214414_x_at 0.0011719140 8.049531e-02 2.986271e-02 3.514907e-04 8.493940e-02
## X214421_x_at 0.0038229825 9.579259e-03 7.418952e-03 1.562599e-02 7.227506e-01
## X214710_s_at 0.0053803444 8.748967e-04 1.025602e+00 8.955671e-02 1.966328e-01
## X215138_s_at 0.1876447927 5.240431e+00 4.205406e-01 1.184239e+00 2.979127e-02
## X215330_at 0.3456170172 1.133706e+00 7.234458e-04 2.093613e+01 1.748662e+00
## X215768_at 0.4378238864 6.090102e-01 2.458041e+00 1.412687e-01 5.453492e+00
## X216025_x_at 0.0110939257 2.608505e-03 1.512242e-02 7.050959e-02 8.750178e-01
## X216661_x_at 0.0018458773 1.843972e-02 1.427797e-05 1.111783e-02 5.000719e-01
## X216782_at 2.1385383337 9.895088e-01 4.982776e-01 1.807765e-03 1.780950e-02
## X217165_x_at 2.0896036718 2.699802e-01 2.048331e-01 2.824461e-01 6.771741e-04
## X217319_x_at 1.1628967255 9.123919e-02 8.344050e-01 7.247678e-01 4.723403e-01
## X217414_x_at 0.0467475393 2.804695e-06 2.649778e-03 2.111628e-04 3.805627e-02
## X217521_at 0.0004154885 8.573638e-02 2.311089e-02 2.699966e-01 2.780910e-01
## X218002_s_at 0.1122105740 1.070277e-02 9.590353e-02 2.571957e-01 1.992417e-02
## X218061_at 0.0007735210 3.995576e-01 2.118485e+00 5.487038e-02 4.098875e+00
## X219485_s_at 1.5620691003 5.917017e-01 9.753811e-01 6.304024e-02 2.808367e-01
## X219787_s_at 0.0349809187 3.039457e-02 2.310648e-02 2.075651e-02 8.793539e-01
## X220017_x_at 0.0077779592 8.240359e-06 4.609415e-02 7.997582e-02 7.351732e-01
## X220114_s_at 1.7230973745 2.593409e-02 1.168553e-01 5.318510e-02 1.180851e+00
## X220116_at 2.4420696001 4.334021e-02 5.476045e+00 1.200848e-01 1.744012e+00
## X220148_at 0.3818818030 1.177010e-01 1.144922e-01 3.125020e-01 3.779763e-01
## X220491_at 0.8366599179 2.652036e-02 3.722283e+00 6.760290e+00 3.290185e+00
## X220496_at 0.2986707600 1.614135e-01 4.982335e-02 6.279681e-02 1.572860e-03
## X36829_at 0.3839107548 5.216726e+00 9.145479e-01 7.444977e-01 7.090147e-03
## Dim.41 Dim.42 Dim.43 Dim.44 Dim.45
## X200606_at 1.838073e-01 5.326794e-01 2.788749e+00 1.630780e-01 1.241759e-01
## X200734_s_at 4.271145e-01 2.326317e-01 1.040106e+00 6.474134e-01 1.526179e-01
## X200882_s_at 5.316266e+00 7.980150e-02 4.021840e-01 1.127487e+00 3.357635e-01
## X200910_at 1.442833e+00 1.541703e-02 1.575971e+00 4.361045e-04 1.114450e+00
## X200954_at 1.308786e-01 4.891168e+00 4.764881e-01 2.906476e-01 5.150032e-02
## X201128_s_at 2.138886e-01 2.043553e+00 1.468072e-01 4.351549e-01 2.820458e+00
## X201184_s_at 2.741035e+00 4.234445e-01 9.640851e-01 1.053678e+00 1.191708e+00
## X201293_x_at 1.630583e-02 1.144108e-04 6.443466e-02 1.978146e-01 3.489580e-01
## X201398_s_at 6.069083e-02 1.997876e-01 6.489218e-01 1.193420e+01 4.745015e-02
## X201441_at 4.353288e-01 8.854561e-01 1.149955e-01 9.072424e-01 1.074318e-01
## X201453_x_at 1.574831e+00 3.919632e-01 2.377702e-01 1.308201e-03 3.123059e+00
## X201516_at 8.347482e-02 3.089150e-01 4.343873e+00 2.026045e+00 1.306987e+00
## X201527_at 1.877429e-01 4.411254e+00 5.433547e-02 4.107972e+00 5.028736e-01
## X201531_at 1.041225e+00 1.281258e-01 5.438588e-03 3.577914e-01 1.659070e-02
## X201577_at 1.770314e-01 2.530887e+00 2.775423e-01 6.839668e-01 4.164158e+00
## X201584_s_at 2.037904e-01 1.264758e-03 5.790260e-01 1.737576e+00 8.185347e-02
## X201656_at 6.434230e-03 1.694090e-02 4.926059e+00 6.861517e+00 1.175636e+01
## X202541_at 1.381073e+00 1.491716e-01 1.797419e+00 2.430806e+00 1.806337e-01
## X202737_s_at 1.254415e-03 1.913108e+00 6.979557e-02 6.813317e-01 1.823319e+00
## X202861_at 2.061498e+00 1.627119e+00 2.551940e-01 3.041129e-01 1.488170e+00
## X202940_at 1.382395e-01 5.054637e-01 5.100290e-01 5.636891e-01 1.549393e-02
## X202963_at 4.090640e+00 1.644819e-01 7.082524e-01 7.279590e-01 1.226406e+00
## X203316_s_at 9.467127e-02 7.261899e-02 2.173458e+00 2.185510e+00 6.213707e-02
## X203554_x_at 1.400082e-03 3.318082e-02 1.771270e-01 6.593760e-01 1.552258e+00
## X203755_at 9.973721e-02 8.820640e-02 1.448202e+00 3.437527e-01 1.278228e-03
## X204018_x_at 2.313393e-04 6.434992e-02 4.253654e-04 7.260703e-02 2.605010e-03
## X204301_at 4.474803e+00 2.591224e+00 1.438619e-01 7.206601e-01 4.024403e+00
## X204428_s_at 7.827810e-01 4.023197e-02 1.596756e-01 4.275739e-01 3.341224e-01
## X204641_at 4.471395e-01 1.177822e+00 1.470694e-01 7.148968e-02 7.206144e-01
## X204977_at 8.264327e-01 2.383449e-01 6.361039e-02 5.823264e-01 1.947188e-01
## X205019_s_at 1.064788e+00 8.285402e-03 3.286703e-02 2.035907e-01 2.590784e-02
## X205086_s_at 1.114490e+00 1.410977e+00 1.388074e-04 6.620446e-02 3.310498e-04
## X205298_s_at 2.147282e-02 8.758802e-01 4.867822e-01 3.740729e-03 9.436644e-02
## X205306_x_at 2.185449e+00 1.528986e+00 5.109758e+00 7.057451e-01 1.301699e-01
## X205392_s_at 4.234884e-01 2.987469e-01 6.665484e-04 1.051129e+00 1.501360e-01
## X205440_s_at 1.080179e+01 1.454199e+00 2.558281e+00 6.765332e-01 3.166362e+00
## X205531_s_at 4.155502e-01 1.152302e+00 2.365961e-02 5.073601e-01 9.047772e-01
## X205554_s_at 1.284914e-01 1.643258e-01 1.864184e-03 5.659461e-04 6.136858e-02
## X205740_s_at 3.364173e-02 1.835114e+00 5.123913e-04 6.391367e-02 2.704814e+00
## X205819_at 1.608851e-01 1.004541e+00 3.615764e-01 3.973459e-02 8.505314e-01
## X205858_at 4.903670e-01 1.378886e+01 6.798269e+00 1.580343e+00 8.384672e+00
## X205866_at 1.102727e+00 6.610766e-02 2.842082e-03 4.191493e-02 7.177757e-02
## X205890_s_at 3.544411e+00 1.848572e-01 3.010126e-01 4.130061e-01 1.410273e+00
## X205911_at 1.457384e-01 4.796285e-01 1.379525e-01 1.399677e-01 1.437912e-01
## X206380_s_at 2.158826e+00 8.272012e-01 1.889890e-01 1.036564e-01 2.069676e-03
## X206453_s_at 1.171105e+00 4.742835e-01 2.582196e+00 1.860151e-02 1.403584e+00
## X206643_at 1.441383e+00 3.391122e-01 6.191213e-01 9.314472e-01 4.453363e-01
## X206680_at 6.091585e-01 1.326148e+00 1.580867e+00 2.877613e-01 2.930057e-01
## X207076_s_at 3.414844e-01 3.301298e-01 3.042242e+00 5.257473e+00 5.432966e-01
## X207218_at 3.253091e-01 1.171726e+00 3.968745e-03 1.405498e+00 2.952948e+00
## X207262_at 1.002128e-02 4.356449e+00 8.576069e-01 1.063653e+00 3.901746e-01
## X207330_at 4.108050e-01 1.379017e+00 1.183529e+00 5.275686e-01 7.128954e-01
## X207609_s_at 2.648321e+00 1.919670e-01 8.700195e-01 6.427916e-02 2.398591e-02
## X207804_s_at 1.223509e-07 2.566748e-01 1.305053e-01 2.162038e-02 1.483166e+00
## X207828_s_at 5.178438e-02 2.283275e-01 2.423515e-03 8.242024e-02 8.680515e-02
## X207995_s_at 6.470630e+00 1.633306e-01 2.346290e-01 2.275182e+00 3.012504e-04
## X208079_s_at 2.054326e+00 4.121892e-01 6.216033e-01 9.330683e-01 6.322453e-01
## X208147_s_at 4.990332e-01 2.366179e-01 1.848578e-01 1.479869e+00 4.805811e-02
## X208816_x_at 7.614552e-02 2.072968e+00 6.444569e-01 1.695548e+00 7.806064e-02
## X209189_at 1.740854e-01 1.879336e+00 4.200148e-02 2.559020e+00 1.766356e+00
## X209219_at 3.428910e-03 1.196388e-01 1.171492e-01 1.295512e+00 1.433071e+00
## X209335_at 1.074436e+00 7.251435e-01 4.481546e-01 3.319100e-01 1.264421e-01
## X209365_s_at 2.042242e+00 2.501760e-02 1.156780e-01 2.359807e-03 1.116298e-01
## X209447_at 9.932602e-01 1.029941e+00 1.829669e+00 1.235031e+00 1.390389e+00
## X209458_x_at 3.689069e-02 1.525914e-01 1.217162e-03 2.882338e-05 3.382508e-04
## X209821_at 3.164381e-01 7.924401e-02 5.557126e+00 1.426463e+00 2.815538e+00
## X209825_s_at 6.149797e-01 2.250807e+00 2.816606e-03 4.096067e-02 5.681044e+00
## X210095_s_at 1.742383e+00 2.710649e+00 2.169034e-01 1.053530e+00 2.883387e+00
## X210481_s_at 3.016033e+00 8.371224e-03 2.161140e+00 9.181905e-02 2.847547e-02
## X210909_x_at 8.651298e-02 7.475039e-01 7.075593e+00 8.284877e+00 3.142813e-02
## X211023_at 7.994834e-02 1.080728e-01 3.696200e-01 8.839740e-01 1.132620e-01
## X211378_x_at 7.043688e-03 6.137676e-03 2.652244e-02 2.145668e-01 2.446754e-01
## X211628_x_at 8.499366e-03 5.390002e-01 2.199164e-01 7.244732e-01 2.673492e-01
## X211699_x_at 2.542617e-03 1.223050e-01 8.184936e-05 1.410460e-03 3.217431e-03
## X211745_x_at 8.210683e-03 2.040875e-02 4.568305e-03 5.845201e-03 1.258924e-02
## X211765_x_at 7.686217e-03 6.816992e-05 2.702863e-02 1.072377e-01 4.301947e-01
## X211978_x_at 3.227858e-02 5.065239e-03 5.713232e-03 2.084863e-01 9.567508e-04
## X212149_at 2.354092e+00 8.052653e-04 1.994887e+00 5.933342e+00 8.611037e-01
## X212551_at 8.228636e-02 3.150606e-01 3.384283e-02 3.752595e-01 1.020967e+00
## X212554_at 3.491108e-04 7.456910e-02 1.403435e-02 4.433568e-02 4.814549e-01
## X212661_x_at 1.005914e-03 1.642400e-02 4.343148e-02 7.908077e-02 3.665137e-01
## X213068_at 2.801380e+00 1.518543e+00 3.933932e-01 4.391336e-01 3.472930e+00
## X213629_x_at 2.064989e-01 9.212827e-01 3.007356e-01 2.557636e-01 8.667828e-01
## X214414_x_at 1.466284e-02 9.980543e-05 1.385613e-01 5.060664e-04 6.144253e-03
## X214421_x_at 1.710166e-01 3.019102e-08 2.885469e-03 6.755720e-03 1.032215e-03
## X214710_s_at 5.482723e-02 2.517448e-02 4.593025e-01 5.886422e-02 1.247530e+00
## X215138_s_at 3.012050e-01 1.779936e+00 2.738765e-01 1.466014e+00 8.429549e-05
## X215330_at 4.806086e-01 2.095650e-01 3.547268e-01 1.582758e+00 8.882194e-01
## X215768_at 5.276042e-02 1.252235e-01 2.180218e-02 1.203808e-03 1.921093e+00
## X216025_x_at 1.510900e-01 5.568509e-04 2.394006e-03 1.025609e-02 1.118825e-02
## X216661_x_at 8.166020e-02 7.710528e-02 6.438487e-03 3.521908e-03 1.536596e-03
## X216782_at 2.037270e-01 3.608507e-03 9.288351e-01 1.238299e-01 8.139303e-03
## X217165_x_at 4.489809e-01 1.415702e+00 4.775207e-01 8.303331e-01 5.017111e-01
## X217319_x_at 3.432665e-01 2.731186e-02 1.061825e-06 4.964594e-02 5.799988e-01
## X217414_x_at 2.606407e-03 1.401841e-03 5.616574e-02 8.745156e-03 8.813896e-05
## X217521_at 7.165892e-01 2.012066e-01 6.813234e-01 6.906789e-01 7.099129e-01
## X218002_s_at 5.114515e+00 2.181192e-01 1.084117e+00 2.613269e-01 2.412148e-01
## X218061_at 1.398817e+00 7.270863e-02 3.160741e+00 3.261656e+00 7.581392e-01
## X219485_s_at 6.123015e-01 3.693752e-02 7.791267e-01 4.451835e-01 1.213906e+00
## X219787_s_at 9.454752e-02 2.437987e+00 4.549721e-01 1.489118e-05 6.797316e-02
## X220017_x_at 3.435060e-02 3.952547e-03 1.718471e-02 2.170302e-02 4.696737e-04
## X220114_s_at 1.180449e-02 1.446839e+00 4.919254e-01 3.962663e-01 6.539237e-01
## X220116_at 1.424188e+00 1.096373e+01 1.639125e-01 8.398664e-02 4.849416e-03
## X220148_at 1.204589e-01 7.354591e-01 2.331838e-01 9.012208e-02 2.903933e-03
## X220491_at 7.813960e-03 8.675343e-01 1.404288e+01 5.354038e-01 7.811688e-02
## X220496_at 1.868752e+00 8.420433e-01 4.957274e-03 5.044319e-01 5.793683e-05
## X36829_at 2.052730e+00 1.354137e+00 2.978438e-01 2.645497e-02 6.239092e-01
## Dim.46 Dim.47 Dim.48 Dim.49 Dim.50
## X200606_at 4.250487e+00 2.492382e-01 4.109142e-05 2.040724e-01 1.773429e+00
## X200734_s_at 5.822535e-01 8.652871e-01 3.764892e-01 1.749692e-01 3.959909e-01
## X200882_s_at 1.890898e-01 1.468880e-01 3.091814e-01 5.583270e-01 7.233949e-02
## X200910_at 1.595233e+00 6.167735e-01 4.431500e-01 1.182503e-02 4.647836e-01
## X200954_at 8.754360e-01 8.875881e-02 3.710991e-01 2.286741e-02 4.667325e-01
## X201128_s_at 8.710832e-04 6.704407e-02 3.795588e-01 1.315162e+00 2.164199e+00
## X201184_s_at 4.156614e-01 1.090750e-04 2.800956e-01 1.672124e+00 4.018145e-01
## X201293_x_at 1.852140e-02 7.188035e-04 8.503524e-02 2.067825e-01 2.674939e-01
## X201398_s_at 7.741984e-01 3.896044e+00 5.950755e+00 8.667728e-01 2.193451e-01
## X201441_at 7.943711e+00 9.084393e-01 6.810253e-02 3.130757e-02 9.311551e-03
## X201453_x_at 3.022926e+00 8.454968e-01 4.007568e+00 2.352943e+00 1.401204e+01
## X201516_at 1.896140e+00 3.610052e+00 5.154295e+00 6.287427e-01 3.918577e+00
## X201527_at 1.057685e-01 6.317229e-04 2.984957e-02 5.418377e-01 7.739944e+00
## X201531_at 1.689638e-01 1.224585e+00 2.036237e-02 1.077445e-02 1.673315e-01
## X201577_at 3.978438e-01 2.736245e+00 1.172241e-01 4.388580e+00 7.317267e-05
## X201584_s_at 4.848639e-01 3.057374e-05 1.944400e+00 4.769026e+00 5.878854e-01
## X201656_at 2.603203e+00 5.052218e+00 1.835045e+00 4.140000e+00 5.243494e-01
## X202541_at 5.227494e-02 5.586146e-01 3.757572e+00 6.204115e-01 3.437531e-01
## X202737_s_at 9.882430e-01 1.218589e-04 1.311910e+00 1.294408e+00 2.142293e-01
## X202861_at 8.925389e-01 1.736414e+00 2.073427e+00 1.871948e-04 1.914467e-03
## X202940_at 2.135749e-01 2.179563e-02 2.568263e-01 4.083597e-01 2.074442e+00
## X202963_at 7.853724e-01 1.181221e+00 3.147958e-01 3.076984e+00 1.758836e+00
## X203316_s_at 8.506750e-01 1.020315e+00 4.503141e-01 1.094704e-02 1.792407e-02
## X203554_x_at 6.710417e-02 9.832390e-02 1.746997e-04 4.788156e-01 1.916763e-02
## X203755_at 4.502833e-02 8.937766e-01 8.183037e-01 1.126352e-03 8.373323e-03
## X204018_x_at 7.180701e-03 9.563237e-02 5.852109e-04 1.063007e-04 5.072162e-02
## X204301_at 1.325541e+00 1.105067e+00 1.272753e+00 2.279267e-07 4.920489e-01
## X204428_s_at 1.658431e+00 1.413207e-02 4.013100e+00 2.023179e+00 8.459356e-02
## X204641_at 2.706966e+00 5.740020e-02 1.150132e+00 1.418385e-01 2.417305e-02
## X204977_at 3.492247e-01 4.549953e-01 1.044806e+00 1.615661e+00 1.561959e-02
## X205019_s_at 2.778505e-01 1.673600e-01 8.426986e-02 6.639080e-01 3.865197e-01
## X205086_s_at 4.559449e+00 2.427852e-01 9.983684e-07 6.236437e-01 2.817895e-01
## X205298_s_at 6.905119e-01 1.137232e+00 1.822740e-01 2.047916e+00 2.016456e-01
## X205306_x_at 1.315310e+00 1.811529e+00 1.572932e+00 9.120111e-02 4.191631e+00
## X205392_s_at 6.671353e-01 1.105356e-02 6.808503e+00 3.045039e-01 3.550389e-01
## X205440_s_at 4.053750e+00 9.027891e-01 6.274613e-02 2.102070e-01 1.711466e-02
## X205531_s_at 8.656778e-02 3.462845e+00 2.714439e-02 1.190897e+00 3.668917e+00
## X205554_s_at 1.601655e-01 4.865655e-01 2.266935e+00 2.207084e-01 4.649671e-01
## X205740_s_at 8.854730e+00 9.784074e-03 6.145876e-05 1.652223e+00 6.765194e-02
## X205819_at 6.109235e-02 1.543500e+00 1.558285e-01 7.736023e-01 6.080967e+00
## X205858_at 4.221084e-01 8.071335e+00 2.589802e-01 2.568257e+00 1.692875e+00
## X205866_at 6.087092e-02 3.193428e-01 2.230528e-01 4.553507e-01 7.257454e-02
## X205890_s_at 2.631645e+00 2.767797e+00 1.021661e+00 1.556709e+00 2.967217e+00
## X205911_at 2.672585e-01 1.167229e+00 3.709371e-01 4.974311e-02 5.267159e-02
## X206380_s_at 1.174420e+00 3.094394e-02 8.058448e-01 1.659640e+00 2.513224e+00
## X206453_s_at 1.051933e-03 8.143772e+00 4.208339e-01 5.232219e-01 5.526048e-01
## X206643_at 2.132994e-01 6.821077e-01 3.100034e-01 2.893166e-01 1.592775e-02
## X206680_at 6.871436e-02 7.062750e+00 8.672771e-01 2.434970e-01 2.418573e-02
## X207076_s_at 1.545000e+00 5.841993e-01 2.033898e+00 3.886970e+00 8.558226e-01
## X207218_at 1.078837e+00 1.148971e+00 1.518642e+00 2.331927e+00 8.564598e-02
## X207262_at 1.111946e-01 7.602138e-01 2.897977e-02 1.041690e-01 6.112538e-02
## X207330_at 1.268271e-01 1.510462e-01 1.346682e-04 5.943670e-01 1.081745e-01
## X207609_s_at 2.494317e-01 3.719436e-03 9.917575e-01 1.102085e+00 8.001113e-01
## X207804_s_at 5.186819e-01 4.256211e-01 1.604557e-01 2.482484e-01 2.974081e-01
## X207828_s_at 3.715445e-01 6.216726e-04 4.701301e-03 2.906421e-02 1.400713e+00
## X207995_s_at 1.269348e-01 7.042788e-02 1.976007e+00 5.067973e-02 2.736560e-02
## X208079_s_at 2.293598e-01 1.762828e-01 7.702617e-05 8.000284e-01 1.541579e-03
## X208147_s_at 2.252097e+00 6.675615e-03 1.525521e+00 1.237261e+00 1.092720e+00
## X208816_x_at 2.691137e+00 1.167831e+00 2.510221e-01 6.633917e+00 2.388975e+00
## X209189_at 1.393526e-01 9.041607e-02 7.669799e-01 9.520833e-01 2.233861e+00
## X209219_at 6.654913e-03 3.062484e+00 6.196042e+00 3.452561e-01 9.018361e-01
## X209335_at 6.426748e-01 1.658854e+00 3.704054e-01 7.239911e-01 2.117977e-02
## X209365_s_at 1.814775e-01 4.069549e-01 1.026797e-01 3.406032e-03 2.155290e-02
## X209447_at 9.300929e+00 5.137313e-04 2.979844e-01 3.565900e+00 1.988760e-02
## X209458_x_at 2.427418e-05 1.360209e-01 2.704054e-02 1.088775e-02 3.925485e-05
## X209821_at 2.851890e-01 2.330006e-01 8.201993e-01 2.922989e-02 2.297088e+00
## X209825_s_at 8.268199e-01 2.152200e-02 2.611254e-01 3.011034e+00 5.481851e+00
## X210095_s_at 1.106874e-01 4.562113e-04 4.002625e-01 6.773038e-02 1.229302e+00
## X210481_s_at 5.949174e-02 7.048831e-02 1.643030e+00 2.008988e-01 8.039329e-01
## X210909_x_at 2.557812e+00 8.128845e-01 6.207732e+00 2.106186e+00 3.742586e-01
## X211023_at 4.901097e-02 8.230035e-01 9.194876e-01 6.729775e-04 1.159054e+00
## X211378_x_at 8.284221e-02 2.304316e-03 1.061705e-03 3.748238e-01 3.076362e-01
## X211628_x_at 1.713739e-01 5.913915e-02 1.917887e-01 5.303165e+00 7.090549e-02
## X211699_x_at 4.118812e-02 8.811996e-03 3.485017e-05 1.408823e-02 2.215040e-02
## X211745_x_at 2.428995e-04 1.481306e-02 1.835034e-02 4.998602e-03 1.025137e-02
## X211765_x_at 3.099646e-04 3.726044e-05 5.119498e-02 3.580588e-01 1.915712e-01
## X211978_x_at 1.457550e-01 4.310826e-04 2.806017e-01 2.507719e-01 1.527485e-01
## X212149_at 4.365171e-03 6.671899e-01 1.965997e+00 6.278412e-03 4.821352e-01
## X212551_at 4.181608e-02 6.669632e-01 1.501811e+00 6.401730e-02 1.637968e+00
## X212554_at 1.198962e-03 5.563420e-01 1.038948e+00 4.703964e-03 3.691956e-01
## X212661_x_at 3.966754e-03 4.260599e-05 3.768695e-02 1.298594e-01 3.285724e-03
## X213068_at 2.780769e-01 1.342656e+00 1.544305e-01 1.960620e-01 2.680874e-01
## X213629_x_at 7.651835e-01 2.032037e-01 1.447323e+00 5.596572e-02 1.060389e-02
## X214414_x_at 1.208420e-03 3.116824e-02 9.480251e-03 1.135249e-01 2.506054e-01
## X214421_x_at 2.415300e-02 2.967224e-01 2.486878e-03 4.904082e-02 3.075457e-01
## X214710_s_at 6.725945e-05 1.325256e+00 1.260276e-01 2.765690e-01 6.534188e-01
## X215138_s_at 6.259171e-01 1.600291e+00 7.603283e-02 3.122042e-01 2.075321e-01
## X215330_at 1.065076e-01 4.747867e-02 2.582214e-03 3.639715e-02 1.757165e-01
## X215768_at 3.288111e+00 6.087316e-01 1.662202e-04 8.017685e-01 4.887384e-01
## X216025_x_at 1.204126e-03 3.355571e-01 8.909845e-04 5.223644e-02 5.111015e-01
## X216661_x_at 7.450775e-02 2.804841e-01 3.280150e-02 1.341979e-01 1.543461e-01
## X216782_at 1.255022e-02 9.707893e-04 1.230262e+00 1.645690e-02 4.503727e-01
## X217165_x_at 8.843742e-01 3.042395e-01 8.823630e-01 1.515048e-01 3.528848e-02
## X217319_x_at 5.726901e-01 3.386757e-01 4.422985e-01 1.618754e-03 6.435113e-03
## X217414_x_at 1.013667e-02 3.183140e-02 2.089859e-02 7.651708e-04 9.446343e-03
## X217521_at 1.450714e-03 4.478150e-01 5.327050e-03 8.573226e-03 1.213110e-01
## X218002_s_at 5.721585e-02 6.450512e-02 5.468904e-02 4.144756e-01 4.079837e-01
## X218061_at 1.893867e+00 7.190437e+00 2.920534e+00 3.899122e+00 3.752545e-01
## X219485_s_at 1.271231e+00 8.307371e-01 2.829337e+00 9.519801e-02 1.347039e+00
## X219787_s_at 1.104969e+00 1.649655e-01 1.415516e+00 3.872970e-02 4.102200e-01
## X220017_x_at 1.968910e-02 1.827729e-01 9.432091e-03 5.709466e-02 5.519951e-01
## X220114_s_at 4.910753e-01 4.893432e-02 1.922392e-01 3.310773e-01 5.935122e-03
## X220116_at 1.985820e+00 4.352840e-01 9.354377e-02 2.752169e+00 2.799229e+00
## X220148_at 1.261856e+00 5.230487e-01 7.994374e-01 8.408718e-03 9.009774e-01
## X220491_at 5.907256e-02 4.111901e-01 7.298908e-01 8.574022e+00 4.158507e-02
## X220496_at 1.476480e-02 8.214089e-01 1.727641e-01 3.757220e-01 1.587178e-02
## X36829_at 4.068165e-01 2.776259e+00 1.481368e+00 7.651167e-03 2.683110e+00
## Dim.51 Dim.52 Dim.53 Dim.54 Dim.55
## X200606_at 2.203592e-04 0.8018801365 0.7922255080 1.805557e+00 5.703669e-02
## X200734_s_at 2.299218e-02 0.0725273636 0.5141023715 9.195066e-02 1.325881e-01
## X200882_s_at 1.078098e+00 0.8048805499 1.2584331808 2.313049e-01 3.058532e+00
## X200910_at 1.281928e+00 0.0498008654 0.1935101101 6.451774e-01 1.393428e-01
## X200954_at 1.331357e-01 1.5855986473 3.0126019065 8.255630e-01 8.106127e-03
## X201128_s_at 7.428887e+00 0.2514600685 3.7952689194 2.394448e+00 4.599086e+00
## X201184_s_at 5.275599e-01 0.2574838153 0.0090643407 1.846762e-01 7.237067e-02
## X201293_x_at 3.460151e-04 0.0325090115 0.0028049902 1.085312e-01 8.169767e-02
## X201398_s_at 7.621127e-01 1.7287829277 0.0824726802 4.571093e+00 3.208172e+00
## X201441_at 1.846337e-02 0.0499153301 0.0563233835 8.892091e+00 1.270618e+00
## X201453_x_at 1.972961e-01 2.5964587367 0.0528500883 8.765847e-01 1.482582e+00
## X201516_at 7.088601e-04 0.0191184047 2.1775258126 2.647852e+00 2.556223e-01
## X201527_at 8.555421e-01 0.8373998179 4.1922790699 3.048352e-01 3.262960e+00
## X201531_at 3.709502e-02 0.2842614965 0.1150976257 1.322086e+00 1.432422e-01
## X201577_at 2.293525e+00 2.3821905909 7.1546550626 2.095818e+00 1.251462e-01
## X201584_s_at 3.296616e+00 0.1006520373 1.5191850005 1.835307e+00 1.110941e+00
## X201656_at 1.051277e+00 1.0190880441 0.1579249319 5.892600e-02 7.531490e-02
## X202541_at 1.392729e-01 1.2366732666 1.6153540849 2.040775e-01 2.315116e+00
## X202737_s_at 3.815129e-01 7.3710075746 0.1140632256 6.836789e-01 1.237708e+00
## X202861_at 2.249204e-01 0.5639670692 0.1000222441 2.347364e-01 5.952600e-01
## X202940_at 4.102117e-01 0.0576650898 0.0076990928 1.031946e-01 7.140895e-01
## X202963_at 4.228374e+00 1.9582171089 4.7151781575 4.571986e-01 2.859412e+00
## X203316_s_at 7.352420e-02 0.4132136430 0.5661050460 5.412966e-01 1.193739e-02
## X203554_x_at 4.326342e-02 0.7017511576 0.0190979787 1.467734e+00 1.035580e-01
## X203755_at 4.804756e-01 0.2074580054 0.5214134312 1.482749e+00 1.169187e-02
## X204018_x_at 1.637759e-02 0.0841718219 0.0206057293 4.318949e-03 4.578636e-02
## X204301_at 6.036596e-02 1.8753310513 1.3671310728 5.053717e-04 2.768241e+00
## X204428_s_at 1.704309e+00 0.1368987373 0.3148462599 7.150280e-01 9.190573e-01
## X204641_at 9.426468e-02 2.5901643827 0.1036471534 1.120410e-01 2.745290e+00
## X204977_at 1.110037e-01 0.9140983529 0.0046660000 3.537853e+00 2.417498e-01
## X205019_s_at 4.601208e-02 0.5176199342 0.8559890314 2.261728e-01 5.122862e-02
## X205086_s_at 9.699242e-02 0.0211024669 0.1332033246 8.891249e-01 5.996629e-05
## X205298_s_at 2.654165e-01 0.0428590578 0.0784713887 7.192696e-01 3.058822e-02
## X205306_x_at 1.004247e+00 5.6938072039 5.4842515014 5.425225e-01 2.831271e+00
## X205392_s_at 3.406707e+00 0.0910247780 0.1318872319 1.454627e+00 3.927921e-02
## X205440_s_at 1.230213e+01 4.8572498552 2.2672766663 9.514911e-01 4.267165e-01
## X205531_s_at 1.882536e+00 0.1068690815 0.2051643766 2.504109e-06 2.210549e+00
## X205554_s_at 2.037434e+00 0.0780851053 0.1469333536 1.106041e-01 2.118940e-01
## X205740_s_at 1.817447e-01 0.6615786971 0.4873937905 1.102023e+00 8.854799e-02
## X205819_at 3.435360e-02 4.1659858034 0.9688934479 3.527344e-02 2.837406e-01
## X205858_at 1.111804e+00 4.5407432865 0.0039189257 2.186458e+00 5.621305e-02
## X205866_at 8.264690e-01 0.4642323070 0.0279172528 6.457188e-01 2.836755e-03
## X205890_s_at 7.645937e-01 1.3614037860 0.1220326114 4.242960e-02 2.008806e+00
## X205911_at 2.840726e+00 3.8797473325 0.5716991714 1.077051e+00 1.553667e-02
## X206380_s_at 5.989743e+00 0.3246740901 0.0003257373 5.684993e-02 1.795712e-01
## X206453_s_at 6.214570e-01 0.8540133802 0.2345427018 7.916414e-01 3.083032e-01
## X206643_at 2.175611e-01 0.2959001584 0.0002750384 2.582158e-02 3.556275e-01
## X206680_at 7.198566e-01 0.6799735085 0.0505307982 1.278115e+00 1.094902e+00
## X207076_s_at 2.387648e-02 0.2847385798 0.2611373711 2.458684e+00 2.458321e+00
## X207218_at 1.001867e+00 0.0553168166 3.6080216214 1.472615e+00 2.555923e+00
## X207262_at 1.991207e+00 1.7503214862 6.4300403828 3.801323e+00 2.524228e-01
## X207330_at 3.709575e-02 0.0077239362 0.1904949922 3.847273e-01 2.315752e-02
## X207609_s_at 9.618373e-01 1.3195507319 1.1093708006 5.514560e+00 1.021700e+00
## X207804_s_at 2.258643e+00 1.2572360365 0.1486712447 2.771230e-02 1.133343e-03
## X207828_s_at 1.449800e-01 0.0010111866 0.2021703986 8.666705e-04 2.766731e-01
## X207995_s_at 3.149837e-01 0.0324708895 2.0647832476 1.353552e+00 8.705316e-02
## X208079_s_at 3.046503e-02 4.0723324704 0.0040407879 2.717118e-01 3.588556e-01
## X208147_s_at 1.688669e-02 1.4903149827 5.7274528523 7.039908e-01 2.370027e+00
## X208816_x_at 1.851436e-01 1.7563996415 5.6738734679 1.937714e+00 4.007648e-02
## X209189_at 5.521805e-04 7.0602004036 0.5958869992 1.536442e-01 1.108879e+00
## X209219_at 1.445329e-01 0.0020831049 0.0827339369 1.583319e+00 1.314141e+01
## X209335_at 5.862096e-02 0.3659220007 0.2417498917 3.027213e+00 7.234393e-01
## X209365_s_at 8.935432e-02 0.5205776489 0.4864049576 1.992864e-01 5.865367e-04
## X209447_at 9.475746e+00 2.2582248127 0.0603567439 2.997702e-01 1.259613e+00
## X209458_x_at 1.169568e-01 0.0587797012 0.0054249606 2.982086e-03 9.178775e-03
## X209821_at 2.708349e-01 0.1721414057 0.1923554917 2.966439e-01 1.849652e-01
## X209825_s_at 9.441501e-01 0.0098506763 1.2979834237 5.068484e-01 7.466799e+00
## X210095_s_at 2.814409e+00 1.0282295946 0.0023718800 3.509884e-01 3.445948e-02
## X210481_s_at 4.717553e-01 0.0986362154 0.1605742550 5.195783e-01 1.635311e-03
## X210909_x_at 2.078780e+00 2.1975582458 2.4115849959 1.638051e+00 6.060034e-02
## X211023_at 1.317132e-01 0.5692387596 1.7898553949 1.278983e-02 1.441151e-03
## X211378_x_at 2.348243e-02 0.0809752273 0.0748256390 1.792383e-02 1.876654e-04
## X211628_x_at 1.460909e+00 0.0705531743 0.0736161775 2.626050e-01 8.814515e-01
## X211699_x_at 8.622722e-02 0.0140169027 0.0055524739 5.642376e-02 9.905902e-03
## X211745_x_at 1.020842e-02 0.0031940699 0.0269738080 1.012847e-03 2.785608e-02
## X211765_x_at 5.070392e-03 0.0374447731 0.0761277796 2.987237e-01 1.435018e-01
## X211978_x_at 9.114990e-02 0.1717093663 0.0110479489 2.554378e-01 3.520899e-01
## X212149_at 1.512221e-01 0.7739961768 0.0432851952 5.334483e-01 1.254317e+00
## X212551_at 3.512916e-01 0.0982881846 1.7866253495 8.696742e-01 4.159206e+00
## X212554_at 1.819842e-02 0.1113916948 0.8332659033 1.720748e+00 3.356217e-01
## X212661_x_at 1.925660e-01 0.0004552290 0.2025563201 1.900408e-01 1.622641e-02
## X213068_at 1.259341e+00 0.0271581202 4.9789465582 1.802403e-01 1.944174e+00
## X213629_x_at 9.751006e-01 0.2207234958 0.9710002542 8.014898e-02 1.606413e-01
## X214414_x_at 7.152931e-03 0.2149122309 0.0001037563 1.718819e-02 1.066852e-01
## X214421_x_at 2.114517e-01 0.0243150293 0.0519411201 1.117678e-01 8.054677e-05
## X214710_s_at 1.387965e-01 0.0443319330 0.0002131625 2.518544e+00 4.481299e-01
## X215138_s_at 3.142229e-04 0.0223388132 0.3097029102 2.299361e-02 3.998035e-01
## X215330_at 1.567595e-02 0.0903259745 1.3012665788 4.182177e-01 5.742688e-03
## X215768_at 1.717606e+00 0.3253407520 1.2966192838 3.821924e-01 2.767981e-01
## X216025_x_at 1.387146e-01 0.0368771912 0.0537146549 6.855184e-02 1.464014e-02
## X216661_x_at 2.021620e-02 0.0002749870 0.0257109836 1.402105e-01 2.260903e-03
## X216782_at 3.073571e-02 0.0634324173 0.8053180990 2.892388e-03 1.660305e+00
## X217165_x_at 7.698135e-01 0.1427018844 0.7650391322 1.028050e-03 4.876556e-01
## X217319_x_at 1.790006e-01 0.4034397362 1.3957361120 2.203536e+00 1.766979e+00
## X217414_x_at 2.026520e-02 0.0003094974 0.0025864476 7.837568e-03 8.464619e-03
## X217521_at 6.683179e-02 0.1328475593 0.0048159404 8.301774e-02 2.003321e-01
## X218002_s_at 7.812674e-02 0.7677647789 0.0157202091 4.315908e-01 8.063265e-01
## X218061_at 1.361353e+00 0.0018399864 1.3184799735 2.423072e+00 4.512591e-03
## X219485_s_at 2.399650e+00 3.5673926666 0.4699665479 1.591607e+00 5.399818e+00
## X219787_s_at 2.831191e-01 0.0008701867 0.8391080350 1.639807e-03 2.058541e-01
## X220017_x_at 7.896411e-02 0.0460070729 0.0146952048 1.187564e-02 2.653390e-02
## X220114_s_at 2.475765e-01 0.3619063217 0.5775758754 4.030665e-01 5.452201e-01
## X220116_at 4.662872e-01 3.2498532033 1.3382712172 3.282752e+00 1.643784e-02
## X220148_at 1.801001e+00 0.2788324429 0.7353293563 1.438624e-01 2.204516e-01
## X220491_at 3.660370e-01 1.1765249758 0.2537135149 6.067414e-01 2.225350e-01
## X220496_at 9.858239e-02 0.4015591441 0.1398141430 2.604288e+00 5.268755e-01
## X36829_at 1.011070e-02 1.0457405358 0.1265334274 9.651180e-01 7.610485e-02
## Dim.56 Dim.57 Dim.58 Dim.59 Dim.60
## X200606_at 0.052945037 8.276431e-01 1.091465e-01 1.3343991235 1.229088e-01
## X200734_s_at 0.009395653 1.544289e-01 2.118176e-02 0.4314256304 3.252389e-02
## X200882_s_at 0.476889308 6.035854e-02 3.558450e-01 0.1238886749 7.878125e-01
## X200910_at 0.139852015 1.795963e-01 4.142293e-02 0.5466014963 1.543857e-01
## X200954_at 0.379848162 8.592414e-01 5.912886e-01 0.0704481855 6.295100e-01
## X201128_s_at 0.258378467 2.219353e-01 2.356220e-01 1.0251393330 5.964523e-02
## X201184_s_at 0.129012517 1.244576e+00 1.698139e+00 0.2793753166 1.397281e-02
## X201293_x_at 0.045664299 1.068277e-01 3.356223e-01 0.0684419994 1.141215e-01
## X201398_s_at 0.951163439 8.384376e-02 5.532208e-02 0.2657292517 5.394207e-01
## X201441_at 0.346279205 9.952553e-03 1.130158e+00 0.3375402023 1.559240e-02
## X201453_x_at 0.394771400 2.404998e+00 1.345333e+00 4.6843949152 3.837279e-01
## X201516_at 0.058489503 1.699644e-01 1.900890e-01 1.2833663299 1.991129e+00
## X201527_at 0.236181922 1.572779e-02 3.538600e+00 0.0011479791 3.900604e-01
## X201531_at 0.009085493 2.364281e-01 2.294066e-01 0.0060028315 1.746797e-01
## X201577_at 0.193536391 2.491278e+00 3.730927e-03 0.0015856922 2.186441e-01
## X201584_s_at 7.218985256 5.487693e+00 7.598664e-02 3.4089789566 2.197482e+00
## X201656_at 0.901765016 2.754524e+00 5.886399e-03 0.5073808484 4.011277e-01
## X202541_at 0.304042354 6.625061e-03 1.507191e+00 0.0656041708 8.286542e-01
## X202737_s_at 0.259765458 3.592338e+00 1.215853e-01 2.9334643017 5.326281e-01
## X202861_at 0.001318134 1.975198e+00 1.173907e+00 2.3105872213 3.979298e-02
## X202940_at 0.002701611 2.072586e-01 3.767359e-03 0.0844543248 3.012979e-02
## X202963_at 2.355000724 6.760716e-02 1.335846e+01 0.2464285802 1.106865e+00
## X203316_s_at 0.216632617 1.083302e-01 1.992685e+00 1.1411867235 2.670244e-01
## X203554_x_at 0.202118487 8.601715e-02 1.763902e-02 0.0419170219 4.004906e-01
## X203755_at 2.656931862 8.155635e-01 2.058398e+00 4.2628258829 8.960397e-02
## X204018_x_at 0.054994776 3.737489e-02 9.656450e-02 0.0320388256 9.402233e-03
## X204301_at 0.090406353 1.112456e-01 8.235088e-01 0.5150048664 2.952009e-02
## X204428_s_at 0.016519038 1.334631e-03 9.195045e-01 0.1137753062 1.531123e+00
## X204641_at 0.185718097 5.143243e-02 2.185057e-01 1.2507447466 2.181537e+00
## X204977_at 0.004482497 7.000032e-01 1.266024e-01 0.4562237253 3.533373e-04
## X205019_s_at 0.016866054 1.206905e+00 1.513693e-05 0.6957812449 1.895899e-01
## X205086_s_at 0.001172010 7.376152e-01 1.225646e+00 0.0191294849 1.007588e-02
## X205298_s_at 2.110969166 5.302527e-01 1.552357e+00 0.0047022368 2.730598e-01
## X205306_x_at 0.053140659 1.587156e+00 2.728191e+00 1.2525830882 5.152934e-02
## X205392_s_at 5.217234159 2.738046e-01 3.662996e-01 2.6641076028 1.387627e+00
## X205440_s_at 1.673679572 8.661726e-01 7.148653e-01 4.6554317768 4.035792e+00
## X205531_s_at 5.235587276 1.792674e-01 1.119639e-01 0.1962964658 6.485317e+00
## X205554_s_at 0.025516907 1.571935e+00 9.590729e-01 0.8800079544 2.738967e+00
## X205740_s_at 0.025071922 1.366888e+00 1.289449e-03 0.0327884450 9.713332e-03
## X205819_at 0.391999919 4.881281e-01 2.808150e+00 1.9011121038 3.671557e-01
## X205858_at 0.161819398 4.833349e-01 4.214693e+00 0.3248038132 1.611053e-02
## X205866_at 0.008134836 1.659465e-01 2.463374e-01 0.0082424175 5.428863e-01
## X205890_s_at 0.172627886 1.046443e+00 7.361377e-01 0.0008938927 8.595884e-01
## X205911_at 0.133577624 9.660540e-01 1.637487e-01 7.2347295506 6.775063e-03
## X206380_s_at 0.569209782 5.284702e+00 1.898873e-01 5.2209244911 1.447953e-01
## X206453_s_at 2.272733957 1.429936e-01 4.451806e-01 1.0398332786 9.048779e-01
## X206643_at 1.667539071 3.931227e-01 1.509034e+00 0.0612370270 7.099588e-01
## X206680_at 0.886573332 2.669900e-01 2.876439e+00 0.0009911681 3.947436e-01
## X207076_s_at 1.451632377 7.972259e-02 6.104220e-01 0.8238829156 5.328827e-01
## X207218_at 0.296181038 3.806521e+00 1.679812e+00 0.1329265487 1.252367e+00
## X207262_at 3.419395014 3.767641e+00 6.271837e+00 0.0778019561 5.085236e-01
## X207330_at 0.200963928 4.043100e-02 2.994489e-01 0.0866322031 6.720608e-01
## X207609_s_at 2.759509512 1.222901e+00 9.572723e-01 0.3957826030 1.209111e-01
## X207804_s_at 0.359629605 2.972432e+00 2.509313e-01 8.5573558129 7.965293e+00
## X207828_s_at 0.310920790 6.170988e-01 6.449991e-02 0.0894206567 2.552867e-06
## X207995_s_at 3.918737543 1.354149e+00 2.372201e-03 0.6665959727 1.620725e+00
## X208079_s_at 0.750366755 4.849144e-02 2.367129e-02 0.0007063741 1.810836e+00
## X208147_s_at 1.752906434 2.023247e-01 5.203725e-01 2.6765294712 1.434457e+00
## X208816_x_at 3.651888321 6.182983e+00 1.560045e-01 2.5619713078 3.309311e+00
## X209189_at 0.073124272 4.021336e+00 2.774036e-01 1.0608451498 9.845888e-04
## X209219_at 0.039074465 2.704782e-02 1.101990e+00 0.0793822375 1.934593e+00
## X209335_at 0.006421398 8.068980e-02 7.562619e-02 2.0615359570 5.031197e-01
## X209365_s_at 0.084848431 6.033365e-02 9.685585e-02 0.8980711389 8.769895e-01
## X209447_at 2.967274047 3.662667e-01 1.763992e+00 3.3602277682 9.781056e-02
## X209458_x_at 0.010836047 1.603807e-02 3.116111e-07 0.0128676511 4.840802e-02
## X209821_at 0.041308599 2.385063e-02 4.894373e-02 0.0587297045 5.099097e+00
## X209825_s_at 3.615525727 5.164551e+00 7.787172e+00 0.0068329910 1.417825e-02
## X210095_s_at 3.851842167 1.897570e-03 1.496379e+00 0.0735851405 2.438182e-03
## X210481_s_at 0.090428962 3.113480e+00 7.238422e-01 0.9605463939 5.839341e+00
## X210909_x_at 0.027835651 6.671468e-01 1.218120e+00 1.9790530354 2.568991e-01
## X211023_at 1.236791722 5.134548e-01 5.562405e-01 0.0068229024 1.403381e-01
## X211378_x_at 0.019640649 2.993383e-01 2.973511e-01 0.0323250777 4.482312e-04
## X211628_x_at 0.014894857 2.422386e-02 1.015448e-03 0.7818284802 3.203776e+00
## X211699_x_at 0.365437390 7.921413e-02 5.390544e-02 0.1807487271 7.386185e-03
## X211745_x_at 0.001873990 1.552215e-04 1.101450e-02 0.0025479636 4.941182e-03
## X211765_x_at 0.121581603 2.531382e-02 1.878449e-01 0.0310677686 2.430017e-02
## X211978_x_at 0.002087076 3.033938e-02 8.137185e-01 0.0017064402 1.888645e-02
## X212149_at 2.667204514 1.196899e+00 4.141007e-01 0.0145844217 6.517520e-03
## X212551_at 1.883989722 1.389565e+00 8.986412e-01 0.0224748421 1.136929e-01
## X212554_at 0.323839388 4.576353e-03 1.418131e-01 0.4993621761 1.417461e-02
## X212661_x_at 0.001409734 6.298056e-02 1.517622e-01 0.0050068885 4.951990e-03
## X213068_at 10.647339863 4.715923e-01 1.021101e-01 0.8004397592 9.448853e-01
## X213629_x_at 0.136791647 6.653448e-01 3.514524e-02 0.2789578104 1.704477e+00
## X214414_x_at 0.009257433 6.856638e-03 5.570858e-03 0.0004742230 1.050572e-02
## X214421_x_at 0.040586258 6.961125e-02 3.408204e-02 0.3611905890 1.775428e-01
## X214710_s_at 0.006392132 7.820115e-01 1.066500e-01 0.1295584906 1.727681e+00
## X215138_s_at 0.436031488 8.006150e-02 8.078481e-03 0.1649626344 9.521013e-01
## X215330_at 0.388294140 2.047659e-02 1.615205e-02 0.0818379029 4.972572e-01
## X215768_at 0.729757014 6.723539e-04 3.059784e-03 0.0565149916 3.875659e-03
## X216025_x_at 0.105098940 1.889477e-01 5.169082e-02 0.3488745244 2.182872e-01
## X216661_x_at 0.461682393 5.972875e-02 1.126107e-02 0.2058730341 1.393802e-01
## X216782_at 3.384875735 1.012994e-03 9.056122e-01 0.5285847006 3.494209e-01
## X217165_x_at 0.015994363 1.793333e-01 2.815496e-01 0.3040544128 1.003805e+00
## X217319_x_at 2.562439726 1.612583e-01 9.601377e-01 0.2179278885 1.850415e+00
## X217414_x_at 0.009536789 4.459358e-02 8.817774e-04 0.0017420572 9.306340e-02
## X217521_at 0.655367185 2.641881e-02 1.656944e-01 0.4681384189 3.057369e+00
## X218002_s_at 0.073207333 3.875474e-03 3.529475e+00 0.0052269327 2.135137e+00
## X218061_at 3.721495758 1.803425e-01 2.300991e-03 0.0175039604 7.434538e-01
## X219485_s_at 0.041764995 3.500301e-02 3.364666e-02 4.3976767285 2.213045e-01
## X219787_s_at 0.133176714 4.327045e-01 1.753568e-03 2.3074591419 1.202407e+00
## X220017_x_at 0.125101661 1.363036e-01 2.168298e-03 0.1401508294 1.519865e-01
## X220114_s_at 0.256895350 1.465969e-01 3.024244e-01 0.3415508633 1.479357e-01
## X220116_at 0.001095445 1.264449e+01 6.244845e+00 1.2730503749 2.355650e-01
## X220148_at 0.717518128 5.696549e-01 2.509026e+00 2.8965142389 5.219911e+00
## X220491_at 0.205955969 1.921591e+00 1.937253e-01 1.1334244842 5.034456e+00
## X220496_at 0.036131225 4.850741e-01 1.565233e+00 1.2666760260 2.690064e-01
## X36829_at 0.002481970 5.959947e-01 7.429450e-01 0.0481777983 6.569500e-02
## Dim.61 Dim.62 Dim.63 Dim.64 Dim.65
## X200606_at 1.035876e+00 2.432131e-01 5.090112e-01 7.678395e-03 1.921235e-02
## X200734_s_at 7.316079e-01 4.937946e-01 2.177531e+00 4.330562e-01 4.947919e-01
## X200882_s_at 1.979653e+00 2.453240e+00 3.082706e+00 3.092295e+00 1.265655e+00
## X200910_at 1.612914e-01 1.245910e-01 4.475934e-02 1.388986e+00 4.521956e-01
## X200954_at 1.868788e-01 1.176537e-02 3.277822e-02 2.780971e-02 1.509721e-01
## X201128_s_at 1.678201e+00 2.442178e-01 2.329115e-02 3.586974e-01 2.091368e-02
## X201184_s_at 1.635492e+00 1.264877e-02 4.761215e-01 1.031542e+00 2.785671e+00
## X201293_x_at 1.866711e-03 9.697586e-02 2.269948e-02 7.440874e-02 6.052178e-03
## X201398_s_at 2.159029e-04 1.616760e-03 7.180430e-01 3.176813e-01 1.015403e+00
## X201441_at 2.785503e+00 4.146370e-01 3.033940e-01 1.034846e-02 3.179947e-01
## X201453_x_at 1.257124e+00 1.615048e-01 1.521238e+00 5.507064e-01 1.424211e-02
## X201516_at 2.321096e-01 2.629085e+00 9.825240e-01 3.336738e-02 6.535864e-04
## X201527_at 1.072154e-01 9.684524e-02 2.953135e+00 1.651961e-01 1.176401e-01
## X201531_at 1.290507e+00 1.658940e+00 7.316594e-01 3.032788e-02 1.628474e+00
## X201577_at 4.396053e-01 1.701157e+00 1.361431e-01 5.228281e-03 8.960968e-03
## X201584_s_at 1.890735e-01 1.556769e-01 6.888189e-01 3.595331e-02 1.361854e-01
## X201656_at 3.294140e+00 4.382920e-01 1.551315e+00 1.543457e+00 5.385033e-01
## X202541_at 1.438693e+00 1.176510e-02 3.244939e-01 4.608987e-01 2.793797e-01
## X202737_s_at 4.725761e+00 4.135473e+00 4.243886e-01 9.600901e-02 6.247559e-02
## X202861_at 1.073292e+00 1.801357e+00 2.255885e-01 1.008851e+00 9.835751e-03
## X202940_at 1.033495e-01 8.396461e-01 1.044632e-02 7.528832e-03 5.762872e-02
## X202963_at 2.200516e-01 1.462350e+00 3.245775e-03 1.155239e-01 5.704045e+00
## X203316_s_at 3.902390e+00 6.052704e+00 8.333671e-01 2.093958e-07 1.832283e+00
## X203554_x_at 2.212982e-01 1.575245e+00 2.954452e-01 3.682554e-01 5.590381e-01
## X203755_at 1.238308e-01 1.295973e-01 1.125964e+00 1.017191e-01 1.523995e-01
## X204018_x_at 4.182202e-03 7.910046e-03 2.370594e-02 1.568787e-02 4.401302e-01
## X204301_at 9.517622e-01 3.065147e-02 8.291517e-01 3.188977e-01 8.107275e-02
## X204428_s_at 1.214584e+00 2.011343e+00 2.154957e+00 4.107226e-01 1.464962e-01
## X204641_at 7.477524e-01 6.839918e-01 7.803846e-01 5.444908e+00 3.964983e-01
## X204977_at 4.051892e-04 6.772890e-02 9.778257e-01 7.113198e-01 4.459292e-01
## X205019_s_at 2.444915e-02 1.576371e-01 2.324191e-01 3.377969e-01 4.252263e-01
## X205086_s_at 4.661584e-02 2.620657e-01 2.609580e-01 6.547724e-02 5.765710e-03
## X205298_s_at 2.817591e-04 3.533292e-01 8.925658e-01 6.815682e-02 1.162466e-01
## X205306_x_at 9.731135e-02 1.395327e+00 6.362352e-01 4.708002e-01 1.088691e+00
## X205392_s_at 8.754270e-01 1.424445e+00 1.554266e-01 3.175343e+00 1.498184e-01
## X205440_s_at 4.115410e-01 2.138854e-02 2.454298e-01 1.472945e-01 5.071840e-01
## X205531_s_at 4.128915e-02 5.228435e-01 4.647794e-01 3.980915e+00 1.204413e-02
## X205554_s_at 1.154193e-01 5.081066e+00 1.636597e-01 8.465919e-02 1.053086e+00
## X205740_s_at 1.379878e+00 9.141350e-01 1.119346e+00 8.964074e-01 3.776483e-01
## X205819_at 6.419134e-01 2.183716e+00 3.579025e+00 2.146105e+00 5.194297e+00
## X205858_at 1.801718e-02 7.715560e-01 2.865697e-01 7.634010e-02 3.710532e-02
## X205866_at 1.854679e+00 2.162270e-01 2.108160e-01 8.467027e-01 1.147017e+00
## X205890_s_at 2.626526e+00 1.971619e-01 3.163787e+00 1.467724e+00 1.973701e-01
## X205911_at 8.342489e-06 2.785395e-01 4.176338e+00 2.918415e+00 7.710697e+00
## X206380_s_at 8.588719e-01 2.013419e+00 5.993855e+00 1.442386e-01 1.067830e+01
## X206453_s_at 4.857221e+00 7.079960e-01 4.355443e-01 2.484456e+00 5.900768e-01
## X206643_at 2.792829e-01 5.422671e-02 5.066256e-03 5.990599e-01 4.013946e-01
## X206680_at 1.569570e+01 7.471865e-01 7.634148e-01 2.525739e+00 5.002512e+00
## X207076_s_at 8.542152e-02 9.232074e-01 2.170628e+00 1.416154e-01 4.546519e-03
## X207218_at 2.708209e+00 4.218621e+00 2.291153e+00 4.925930e-01 2.342773e-01
## X207262_at 3.152870e-01 2.672761e+00 9.798699e-01 6.140451e+00 9.406802e-01
## X207330_at 3.860450e-01 3.405253e-01 7.510448e-02 2.843520e-02 1.301439e-01
## X207609_s_at 3.457973e-01 1.237171e-01 1.835694e+00 7.288026e-01 1.944575e+00
## X207804_s_at 1.088156e-01 1.741204e-01 2.001305e-01 1.326617e-01 6.345799e+00
## X207828_s_at 5.349883e-01 3.176886e+00 3.362661e-01 6.133176e-02 7.200382e-01
## X207995_s_at 1.946338e+00 5.424398e-02 1.338171e+00 3.803740e-04 6.734995e-01
## X208079_s_at 6.394099e-01 5.950963e+00 3.998134e+00 3.403008e+00 8.930806e-01
## X208147_s_at 4.332478e-01 2.816260e+00 1.085169e-01 5.919658e+00 4.414270e+00
## X208816_x_at 6.410287e-02 4.266143e+00 3.737972e+00 1.153361e+00 2.564912e-02
## X209189_at 5.990901e-01 7.932433e-01 1.497573e+00 1.843300e+00 4.030135e-01
## X209219_at 1.208584e+00 5.718621e-01 2.812078e+00 9.484837e-03 1.299250e-02
## X209335_at 2.333810e+00 9.133524e-02 1.453447e-01 7.011873e-01 1.287536e+00
## X209365_s_at 2.316249e-03 3.297605e-01 5.643248e-02 2.297179e-01 2.073703e-01
## X209447_at 2.587223e+00 3.985019e+00 7.119228e-01 1.899103e-01 8.102472e-01
## X209458_x_at 4.785964e-02 2.117816e-03 2.401253e-02 1.185451e-02 6.866201e-02
## X209821_at 2.392407e-02 3.120365e-02 7.366374e-01 5.746972e-01 5.874552e-01
## X209825_s_at 1.753265e+00 1.772899e+00 1.481286e-03 5.084581e+00 7.850544e-01
## X210095_s_at 2.636785e+00 1.607194e-02 3.666739e-03 7.166847e-01 2.726108e+00
## X210481_s_at 1.937026e-01 5.133370e-02 1.278309e-02 5.693277e+00 1.777790e+00
## X210909_x_at 1.996305e+00 1.937746e+00 9.625088e-01 1.738441e+00 6.610446e-04
## X211023_at 5.762351e-01 8.906130e-03 1.042574e-01 6.729147e-03 6.972778e-03
## X211378_x_at 6.998548e-03 5.292980e-02 7.047139e-02 2.560135e-02 6.941563e-05
## X211628_x_at 3.035842e-01 1.175753e+00 1.431918e+00 3.827318e-01 1.812612e+00
## X211699_x_at 6.471174e-01 1.121736e-01 1.379877e-04 1.904514e-02 1.064458e-02
## X211745_x_at 6.767804e-02 3.927900e-02 1.650059e-02 4.774642e-02 2.426362e-07
## X211765_x_at 3.597593e-04 9.428380e-03 4.917945e-02 8.510894e-03 5.682921e-03
## X211978_x_at 3.322696e-02 2.593186e-03 5.654155e-04 2.324450e-04 2.231003e-01
## X212149_at 5.256169e-01 3.358538e-01 2.172619e+00 1.908514e-01 7.314554e-01
## X212551_at 2.475834e-01 5.899719e-01 2.038988e+00 6.370858e-03 2.356564e-01
## X212554_at 3.057431e-01 8.543361e-03 8.332990e-03 7.828117e-03 5.490346e-02
## X212661_x_at 2.082429e-02 2.651833e-04 2.257085e-02 4.096945e-03 2.331285e-02
## X213068_at 6.085273e-03 4.167778e+00 4.258389e+00 7.325427e-01 6.712830e-02
## X213629_x_at 1.746281e-01 5.079656e-03 1.233296e-01 2.133815e-01 7.003286e-01
## X214414_x_at 1.211000e-01 7.390450e-03 4.010470e-02 7.114401e-02 3.884669e-02
## X214421_x_at 1.638848e-02 3.558380e-04 7.128420e-04 4.901172e-02 2.635286e-02
## X214710_s_at 1.075574e-04 2.816145e-01 1.010726e-03 3.544370e-02 1.190340e-01
## X215138_s_at 6.004733e-01 7.448208e-05 4.190206e-01 3.060811e-02 1.434774e-01
## X215330_at 1.593632e-03 5.735618e-02 2.320202e-01 2.207952e-01 5.889594e-02
## X215768_at 1.971094e-02 2.480151e-01 1.636675e-01 1.152849e-02 5.290056e-02
## X216025_x_at 4.946664e-02 7.954843e-03 4.992990e-02 1.319838e-01 7.916135e-02
## X216661_x_at 2.661404e-02 2.941497e-02 7.775162e-04 1.641231e-03 1.390824e-01
## X216782_at 8.810926e-02 4.454185e-02 6.681999e-02 6.420265e-01 2.471131e-02
## X217165_x_at 7.636281e-02 2.299375e-03 1.263194e-01 1.739499e-03 1.058099e+00
## X217319_x_at 3.300599e+00 2.658315e-01 3.135168e-01 1.182542e+01 2.312613e-01
## X217414_x_at 5.804450e-03 3.735256e-03 6.427141e-02 3.775796e-02 4.125083e-02
## X217521_at 2.895692e-02 2.144913e-03 1.403976e-02 4.174435e-01 1.448008e-03
## X218002_s_at 1.696619e-01 2.523364e-01 2.637523e-02 6.225671e-01 1.564222e-02
## X218061_at 1.343074e+00 3.244128e+00 1.115525e+00 6.813925e-04 4.283915e-02
## X219485_s_at 7.241513e-03 6.630500e-01 2.793483e-02 7.928382e-01 2.953572e+00
## X219787_s_at 8.650319e-01 2.732950e+00 1.690159e-01 3.590991e+00 5.901021e-01
## X220017_x_at 3.024269e-02 1.136283e-06 1.116290e-02 1.978481e-01 1.526525e-02
## X220114_s_at 1.146426e+00 3.121197e-02 4.039238e-07 2.665885e-02 2.544907e+00
## X220116_at 6.850332e-01 8.325538e-01 4.327195e-01 2.376075e-01 5.604751e-01
## X220148_at 3.419447e+00 6.802115e-01 1.093931e+01 2.215232e+00 1.128820e+00
## X220491_at 9.545791e-01 1.878851e-01 4.124520e+00 1.483410e-01 6.222073e+00
## X220496_at 1.289146e+00 1.488239e-02 2.389367e-01 3.858326e-01 1.045805e+00
## X36829_at 3.304740e-01 2.551234e+00 3.395796e-01 1.061063e+00 1.654458e-01
## Dim.66 Dim.67 Dim.68 Dim.69 Dim.70
## X200606_at 2.046645e-03 4.290269e-01 1.360831e+00 0.0355791887 8.031971e-02
## X200734_s_at 1.013511e-01 3.068841e-01 1.384583e-01 0.0007360849 1.036562e-01
## X200882_s_at 1.806133e-02 4.002804e-02 1.092591e+00 0.2055982128 4.405746e-01
## X200910_at 1.306535e+00 3.309583e-01 9.556687e-02 1.0285051024 4.272370e-01
## X200954_at 4.585596e-01 7.899017e-04 3.190207e-01 0.3839291716 3.048076e-01
## X201128_s_at 2.761825e+00 4.513005e-01 3.784272e+00 0.1982615778 3.515689e-04
## X201184_s_at 6.795817e-04 9.260967e-01 1.942261e+00 0.0353206186 5.997941e-01
## X201293_x_at 5.499108e-02 1.465834e-01 3.748216e-02 0.1605997042 1.843259e-03
## X201398_s_at 8.749566e-01 1.275372e-02 2.420256e-06 0.0145651779 1.316095e+00
## X201441_at 1.609000e-01 1.808913e+00 2.558280e+00 0.0246498525 6.966795e-02
## X201453_x_at 6.072939e-01 5.802808e-04 2.810394e-01 1.1085572789 4.938792e-03
## X201516_at 7.965988e-02 7.341711e-01 1.827790e-02 0.0703464914 8.646177e-02
## X201527_at 1.124486e-02 1.425224e-01 2.537776e-01 0.1634054150 2.502365e+00
## X201531_at 2.516334e-02 5.810035e-02 2.737301e-01 0.0488225898 1.625206e-01
## X201577_at 3.281077e-01 1.426630e-01 4.141176e+00 2.1872547039 3.800822e-01
## X201584_s_at 1.364936e-02 1.712725e-01 1.478906e+00 4.7482109709 6.675782e+00
## X201656_at 1.295051e+00 6.998459e-02 3.091753e-01 0.0181591642 1.043993e-01
## X202541_at 5.796430e-01 2.325809e-01 6.120824e-01 0.0019827471 5.147904e-02
## X202737_s_at 8.473589e-01 6.522470e-01 6.623499e-01 0.0674201178 9.799621e-01
## X202861_at 8.805857e-03 9.149213e-01 1.954419e+00 0.0038363002 1.196662e-01
## X202940_at 1.844274e-01 5.573814e-02 1.320435e-01 0.5173777088 9.362845e-02
## X202963_at 3.409415e+00 1.766796e-01 1.782743e-01 0.1115086143 9.057149e-01
## X203316_s_at 1.374516e+00 1.485799e+00 3.751951e-01 8.0634656705 3.707494e-01
## X203554_x_at 1.932596e-01 8.351219e-02 9.319906e-02 0.0004174708 2.452149e+00
## X203755_at 8.633830e-01 3.630267e-01 2.218211e+00 1.5355581632 7.525273e-01
## X204018_x_at 2.834410e-04 3.267300e-02 1.445150e-01 0.0168690013 2.107045e-03
## X204301_at 1.029812e-01 1.072146e-01 1.438314e-01 0.0135472093 1.723678e-01
## X204428_s_at 9.002856e-01 2.628560e-01 4.155679e-01 0.0023123789 5.830965e+00
## X204641_at 1.233377e-02 3.871887e+00 9.288275e-01 0.7307237975 4.993186e+00
## X204977_at 1.405431e-01 2.887051e-02 2.556855e+00 0.1155388941 1.961473e+00
## X205019_s_at 2.145451e-01 4.748249e-01 4.449830e-03 2.7674564461 4.605164e-04
## X205086_s_at 1.095580e-02 1.780031e+00 3.790012e-01 0.0415206721 4.555467e-03
## X205298_s_at 3.858122e-04 5.262243e-02 2.772868e-02 0.0864556822 3.264626e-02
## X205306_x_at 5.176540e-02 3.035711e+00 3.811252e-01 0.1847906791 7.825939e-01
## X205392_s_at 9.277139e-01 1.839775e-01 2.807942e-01 3.0849143046 5.746202e-02
## X205440_s_at 7.433651e-03 1.758137e-01 1.587610e-01 2.0402013619 7.255728e-01
## X205531_s_at 8.447191e-01 3.291922e+00 1.711361e+00 0.3794285419 4.935623e-01
## X205554_s_at 5.922901e-01 6.872025e-02 3.616314e-01 3.0767827346 1.539764e+00
## X205740_s_at 7.033601e-01 2.985831e+00 2.775771e+00 0.0246884373 5.288222e-02
## X205819_at 2.061321e-01 7.488930e-01 2.531380e+00 0.6694163326 5.544119e+00
## X205858_at 9.393366e-02 1.716958e+00 8.730127e-02 0.5869305017 1.536300e-02
## X205866_at 4.269137e+00 9.965948e-01 3.929907e-01 3.0679971846 1.126200e+00
## X205890_s_at 3.460667e-01 1.298171e+00 9.879877e-03 0.0038351752 6.331393e-01
## X205911_at 4.632401e+00 6.273813e+00 1.525563e+00 0.2437141596 3.007615e+00
## X206380_s_at 1.370838e+00 3.521737e+00 9.865872e-02 0.0345990449 3.842479e-02
## X206453_s_at 1.348480e+01 5.093650e-01 1.248046e-01 4.1015431335 8.913334e-01
## X206643_at 1.071243e-02 1.794772e-02 2.709285e-01 0.0309821072 1.535869e+00
## X206680_at 3.858932e+00 3.539468e+00 2.860079e-01 1.6698081684 1.440959e+00
## X207076_s_at 5.668973e-01 1.961488e-02 9.752853e-01 3.5579813450 2.170155e+00
## X207218_at 1.695594e+00 4.368673e-01 6.578002e-01 0.1450280849 3.711176e+00
## X207262_at 2.250452e+00 1.012468e+00 1.226781e+00 3.2265264788 1.201758e-01
## X207330_at 1.776737e-02 1.992886e-01 4.914816e-01 0.0729031311 4.348024e-01
## X207609_s_at 9.905859e-02 8.833050e-01 4.569090e+00 1.2680896476 2.412187e-01
## X207804_s_at 3.012551e+00 4.863441e+00 3.255368e+00 1.0752209719 1.255312e-02
## X207828_s_at 1.803073e-02 1.289409e+00 2.644155e+00 1.0703477698 2.778575e+00
## X207995_s_at 8.269581e-02 1.597878e+00 1.251348e+00 1.0066178123 1.029063e+00
## X208079_s_at 7.624786e-01 3.213733e+00 7.785993e+00 0.2805170958 1.458146e+00
## X208147_s_at 1.221850e-01 7.101413e-01 2.004219e-02 1.2618101324 6.037348e-03
## X208816_x_at 2.316987e-08 3.737304e-01 1.262829e+00 0.4754263858 1.444881e+00
## X209189_at 5.671630e-01 3.684476e+00 3.800169e-01 2.5019288634 1.995312e-01
## X209219_at 3.078575e-04 1.101000e+00 7.469655e-01 3.5385691949 3.883582e+00
## X209335_at 1.604642e-03 8.177984e+00 2.135014e+00 0.9143438749 1.845944e+00
## X209365_s_at 3.328066e-02 5.660126e-02 1.345760e+00 0.0078980175 1.243482e+00
## X209447_at 2.625960e-02 1.087516e-01 1.419288e+00 0.1006701217 4.165955e-01
## X209458_x_at 4.838727e-02 7.333816e-03 3.397584e-02 0.0192424946 4.325731e-03
## X209821_at 8.079815e-06 1.095100e+00 5.753847e-01 0.8229836776 1.042830e+00
## X209825_s_at 8.484372e-01 3.082398e-01 1.978542e-02 4.9477286701 3.969103e-01
## X210095_s_at 1.998125e-01 2.157840e-01 8.988019e-01 1.0853049835 1.229024e+00
## X210481_s_at 5.352969e-01 2.731894e+00 9.508275e-01 8.5386888615 1.339774e+00
## X210909_x_at 7.220314e-01 8.553125e-01 2.745861e+00 0.2855927444 2.031680e+00
## X211023_at 9.622238e-01 1.289743e-02 1.000512e-01 0.0486484235 1.072285e-01
## X211378_x_at 3.081545e-02 4.372800e-02 1.217369e-02 0.1215409324 2.029994e-05
## X211628_x_at 1.134975e-03 2.327217e-01 2.354678e-01 0.0669739238 1.015041e+00
## X211699_x_at 1.063999e-02 1.225508e-01 2.157975e-01 0.0122860010 2.822322e-03
## X211745_x_at 4.709433e-02 7.439056e-02 2.891080e-02 0.0001441656 1.036973e-05
## X211765_x_at 4.253961e-02 9.958256e-02 3.250590e-02 0.0918302527 6.451198e-04
## X211978_x_at 2.549095e-01 4.584908e-02 1.543198e-03 0.1876512209 1.503614e-01
## X212149_at 8.414006e-05 1.502527e+00 9.781771e-01 0.3613180699 1.436553e-03
## X212551_at 1.524368e-02 1.726988e-01 1.965640e-02 0.6426555610 1.114851e-01
## X212554_at 7.541340e-02 8.036945e-02 6.017951e-02 0.0127689477 2.618209e-01
## X212661_x_at 1.650279e-01 1.149559e-01 4.611817e-02 0.0519289555 1.678797e-02
## X213068_at 9.566240e-02 1.351965e+00 4.885810e-01 0.0817151685 9.601312e-02
## X213629_x_at 1.366153e-01 8.523642e-01 3.538835e-02 0.0426277331 4.312018e-03
## X214414_x_at 7.111289e-02 4.549778e-03 2.885243e-01 0.1302570622 6.270823e-02
## X214421_x_at 8.078681e-02 7.994336e-03 3.395800e-02 0.0263961274 1.583761e-02
## X214710_s_at 9.847568e-02 6.532157e-02 1.188852e-01 2.3672498183 5.097668e-01
## X215138_s_at 3.646784e-01 3.830659e-02 3.596530e-01 0.0006047112 1.472370e-03
## X215330_at 2.239218e-02 5.397985e-01 8.616988e-02 0.4551500896 2.018106e-01
## X215768_at 4.819171e-02 1.269373e-02 1.480184e+00 0.2230466665 2.608947e-01
## X216025_x_at 1.705755e-01 1.121324e-02 4.524524e-02 0.0539191430 2.865254e-02
## X216661_x_at 1.133410e-01 2.633428e-03 3.493453e-01 0.0892443285 4.216584e-02
## X216782_at 6.617281e-01 1.767858e-02 3.071242e-01 0.0188865931 4.542978e-01
## X217165_x_at 2.774976e-03 6.365487e-02 1.094379e-01 0.0063623000 8.527145e-03
## X217319_x_at 2.681542e+01 1.930880e-01 2.362764e-01 3.5444620067 6.726363e-02
## X217414_x_at 8.222025e-04 4.216389e-02 2.584703e-05 0.0037163054 5.263191e-02
## X217521_at 6.334233e-03 1.021009e-02 2.079464e-02 0.2765163643 5.460655e-02
## X218002_s_at 3.954305e+00 1.157168e-01 5.624986e+00 4.4914380628 5.270338e-01
## X218061_at 1.217827e+00 6.595291e-02 3.440759e+00 0.6230623570 4.158620e-02
## X219485_s_at 4.175230e-01 8.155060e-01 7.139256e+00 0.4918542220 1.056141e+01
## X219787_s_at 5.782559e-01 2.184784e+00 3.551896e-02 0.0007811192 2.399808e+00
## X220017_x_at 1.671049e-01 1.272005e-06 1.367988e-01 0.0074202351 4.580517e-03
## X220114_s_at 1.428070e+00 1.263909e+00 8.946406e-01 5.1628858867 1.090256e+00
## X220116_at 7.179155e-02 2.781510e-03 1.320394e-02 0.3366903730 4.816837e-02
## X220148_at 5.370029e-01 1.206943e+00 3.539793e-01 0.0101305033 3.788304e+00
## X220491_at 3.111928e-04 4.329325e+00 4.860028e-01 0.0088381834 1.860650e-02
## X220496_at 8.789627e-01 4.380618e+00 5.628878e-01 0.0257369160 1.042644e+00
## X36829_at 5.010674e-01 2.263165e+00 3.215810e-01 0.0117168635 3.912611e-02
## Dim.71 Dim.72 Dim.73 Dim.74 Dim.75
## X200606_at 5.429115e-03 1.175957e-02 1.052761e-01 2.910846e-03 1.245750e-01
## X200734_s_at 7.044066e-01 5.813147e-03 1.626304e+00 1.843633e-01 9.023086e-02
## X200882_s_at 7.871581e-03 1.762040e-01 6.843886e-01 4.036748e+00 7.476690e-01
## X200910_at 7.345495e-01 4.304876e-01 1.129570e-02 4.023184e-01 3.095457e+00
## X200954_at 4.237669e-02 8.690157e-01 9.773112e-03 8.764103e-03 9.084591e-02
## X201128_s_at 6.850887e+00 2.048589e+00 3.432567e+00 1.420299e+00 2.441113e+00
## X201184_s_at 5.057308e-02 5.890441e-01 1.072599e-01 2.423305e-01 2.068957e-02
## X201293_x_at 1.922591e-03 5.569626e-04 2.410193e-02 1.279241e-01 1.595028e-01
## X201398_s_at 3.100888e-01 1.098799e-01 1.718414e-01 2.976759e-01 1.386953e+00
## X201441_at 5.671398e-02 1.818055e-01 5.656936e-02 3.615959e-02 8.309294e-01
## X201453_x_at 1.266558e+00 3.285001e-05 2.893095e-01 1.212208e+00 7.950453e-01
## X201516_at 5.247512e-02 6.966057e-02 3.376868e-01 5.099061e-01 7.506824e-01
## X201527_at 9.309470e-02 3.583588e-01 1.263083e-02 1.060959e+00 1.317044e+00
## X201531_at 1.587329e-01 9.045612e-01 3.467335e-01 1.132192e+01 1.618711e+00
## X201577_at 4.226324e-02 4.203476e+00 1.026120e+00 3.719999e+00 9.964827e+00
## X201584_s_at 8.845460e-01 2.033928e-01 7.244534e-02 1.659729e-03 1.912943e+00
## X201656_at 1.098755e-01 3.011621e-01 2.262409e-02 8.007989e-01 3.732029e-01
## X202541_at 7.771032e-01 2.918801e-03 1.042476e-01 2.353515e-01 2.542874e-01
## X202737_s_at 3.022101e-01 9.332428e-01 5.288486e-01 6.792987e-02 1.583486e+00
## X202861_at 2.256762e-01 2.225170e-01 2.508261e+00 4.898051e-01 9.868583e-02
## X202940_at 3.094210e-02 5.524779e-02 9.297558e-07 7.438885e-03 1.007268e-02
## X202963_at 5.758855e-05 2.724969e-02 7.286679e-02 5.904767e-02 1.578014e+00
## X203316_s_at 2.948725e+00 7.869708e-01 2.742175e+00 8.360283e-03 2.973282e+00
## X203554_x_at 2.897582e-03 3.082016e-01 1.143962e+00 6.707371e-01 4.360863e-02
## X203755_at 4.453888e+00 7.705498e-01 2.495706e+00 4.122253e+00 5.810926e-01
## X204018_x_at 3.298692e-02 2.724628e-04 1.711587e-02 3.047903e-02 6.791500e-03
## X204301_at 8.761259e-02 3.614708e-04 7.248676e-02 2.341386e-02 7.721952e-04
## X204428_s_at 4.454588e+00 8.896175e+00 2.088987e-01 3.879001e-01 6.291570e-03
## X204641_at 6.108049e-01 1.406261e-01 1.387277e+00 6.766625e-03 2.941212e-02
## X204977_at 2.790190e-01 3.462692e-02 3.497027e-01 1.263011e-01 6.723925e-04
## X205019_s_at 3.873987e-02 3.173089e-01 8.470121e-01 1.179367e+00 1.576444e-01
## X205086_s_at 1.247342e-03 4.034589e-02 9.712604e-02 2.826076e-01 1.536118e-01
## X205298_s_at 3.893261e-03 1.196398e-01 4.218015e-03 3.942143e-01 2.528105e-02
## X205306_x_at 1.564674e-03 3.534799e-01 4.533332e+00 1.857035e-01 1.465616e-01
## X205392_s_at 3.140435e-01 9.383619e-05 4.459743e+00 7.330624e-01 4.001465e-02
## X205440_s_at 2.271343e-01 7.592589e-01 1.341992e-01 1.570244e-01 3.358714e+00
## X205531_s_at 1.942482e-03 4.936026e-04 2.980629e-01 3.129156e-03 1.220775e+00
## X205554_s_at 5.150556e-02 9.639471e-01 1.401165e-01 1.387675e+00 7.518528e-01
## X205740_s_at 3.028938e+00 3.106160e-01 1.333863e-01 3.800781e-01 2.689226e-01
## X205819_at 5.016814e-01 1.733902e-01 7.755561e+00 2.747418e-01 6.810261e-02
## X205858_at 1.355196e-05 4.095176e-05 8.378759e-02 2.821735e-01 3.866396e-01
## X205866_at 5.280800e+00 5.228591e+00 9.763603e-01 4.024553e-01 2.894730e-03
## X205890_s_at 9.748524e-01 4.390492e-02 2.021120e-01 3.244045e-01 2.578477e+00
## X205911_at 1.804035e-01 1.748354e+00 1.819356e-03 6.522904e-05 9.740011e-01
## X206380_s_at 7.457896e-02 4.189270e+00 1.905716e+00 8.274830e-01 5.094383e-02
## X206453_s_at 6.903378e+00 1.078793e+00 1.458290e-01 2.719713e+00 6.187256e-02
## X206643_at 4.819227e-01 1.142900e-01 7.906149e-03 9.665051e-02 5.279630e-01
## X206680_at 4.138671e+00 1.345077e+00 1.896040e-01 3.936994e-01 1.750286e-04
## X207076_s_at 1.763793e-01 3.586941e+00 2.213318e+00 8.049596e-01 1.165515e+00
## X207218_at 1.028550e-01 2.160389e+00 3.820037e-01 1.787152e-01 1.615432e-02
## X207262_at 1.778790e-03 4.958312e-01 9.171415e+00 9.199873e+00 7.096389e-01
## X207330_at 4.144131e-02 1.483891e-02 2.208272e-01 6.990038e-03 1.001274e-01
## X207609_s_at 1.297141e+00 2.548385e+00 1.049830e-02 5.158759e-01 2.773775e+00
## X207804_s_at 1.456781e+01 1.952675e+00 6.699606e+00 6.292686e-01 1.212601e-01
## X207828_s_at 2.589569e-02 9.060846e-01 6.795916e-01 2.017787e-01 9.593011e-01
## X207995_s_at 5.626852e-02 1.345460e-01 1.232043e-01 2.805168e-01 4.801660e+00
## X208079_s_at 2.962989e-01 1.745906e+00 6.924467e-02 1.827485e+01 9.092470e-01
## X208147_s_at 2.221689e+00 2.285968e+00 3.969819e+00 8.507272e-02 2.989482e+00
## X208816_x_at 9.399543e-01 8.235916e-02 5.652873e-01 3.707748e-01 3.875925e-01
## X209189_at 4.842753e-01 1.444865e-03 2.210800e-02 4.475804e+00 1.060757e-01
## X209219_at 1.688978e-01 2.093942e+00 2.919287e+00 4.810522e-01 5.642902e+00
## X209335_at 1.354379e+00 3.356092e+00 2.001223e-03 1.008734e+00 3.316783e+00
## X209365_s_at 1.156932e+00 4.714942e+00 8.977977e-01 1.517133e-01 1.020238e+00
## X209447_at 1.012522e-01 3.418682e-04 3.547080e-01 5.883490e-01 2.562781e-01
## X209458_x_at 2.807398e-02 1.747564e-03 1.185400e-01 7.471968e-02 1.083773e-02
## X209821_at 8.404983e-01 2.051327e+00 7.518063e-02 2.182127e-03 1.908084e-01
## X209825_s_at 1.056120e+00 1.523929e+00 5.159871e+00 1.431999e-02 6.057743e-01
## X210095_s_at 1.527310e-01 9.629608e-01 1.891109e-01 2.399976e+00 3.225688e-01
## X210481_s_at 1.497295e-02 1.002273e+00 2.949850e-01 9.155251e-02 3.041682e-01
## X210909_x_at 1.191552e-01 2.400591e-02 1.169530e-02 7.905817e-01 7.010594e-01
## X211023_at 5.621690e-01 1.094501e-01 2.719392e-01 5.242366e-02 1.060966e-01
## X211378_x_at 3.845298e-04 2.415443e-02 2.412039e-02 2.128828e-01 2.592008e-02
## X211628_x_at 5.470768e-02 5.056932e-04 6.017334e-03 6.429729e-04 2.207199e-04
## X211699_x_at 3.606202e-02 5.720862e-02 1.047287e-01 7.773616e-02 7.657205e-05
## X211745_x_at 6.164230e-02 1.036785e-01 3.694920e-03 5.963572e-02 1.589191e-02
## X211765_x_at 7.610380e-04 5.866753e-03 1.701069e-02 4.655010e-01 1.823082e-01
## X211978_x_at 2.584927e-01 2.920094e-01 2.437185e-03 1.685690e-02 1.038044e-01
## X212149_at 4.112230e-01 4.332581e-03 9.743511e-01 5.128433e-02 9.187731e-01
## X212551_at 2.442811e-01 2.670293e-02 2.527378e-01 1.319219e-01 1.615268e-01
## X212554_at 6.654273e-01 2.838259e-02 6.344302e-01 5.390787e-01 2.343438e-01
## X212661_x_at 1.594637e-02 4.130584e-02 6.190288e-04 1.711544e-02 8.314607e-02
## X213068_at 2.489819e-01 1.256158e+00 1.357863e+00 3.782682e-01 3.180292e-04
## X213629_x_at 4.756271e-02 2.674847e-01 4.291397e-03 1.540833e-01 1.852352e-01
## X214414_x_at 1.010269e-01 3.598734e-05 2.123768e-01 2.027585e-01 5.170557e-02
## X214421_x_at 3.133986e-02 4.243260e-02 3.507468e-02 6.821696e-03 9.933260e-02
## X214710_s_at 9.171476e-01 1.209251e+00 3.006122e+00 4.577952e+00 2.246142e+00
## X215138_s_at 1.621396e-02 2.562154e-01 1.227377e-02 1.883765e-01 1.982660e-01
## X215330_at 5.681293e-02 8.281290e-03 2.666505e-01 9.118343e-02 2.868129e-03
## X215768_at 2.308299e-01 6.181714e-01 1.864719e-02 3.165941e-02 1.307480e-01
## X216025_x_at 8.831032e-02 1.192916e-01 1.026634e-01 9.715858e-03 2.541703e-01
## X216661_x_at 2.271680e-04 3.645578e-02 4.155162e-01 9.879170e-02 3.681215e-04
## X216782_at 1.128424e-01 8.591099e-02 2.233814e-04 1.239907e+00 2.252937e-01
## X217165_x_at 2.947128e-02 1.378335e-02 2.270213e-02 2.513727e-01 4.890147e-03
## X217319_x_at 4.196812e+00 1.384051e+00 1.693665e+00 1.125937e+00 5.101964e-01
## X217414_x_at 4.594137e-02 5.390982e-03 2.990535e-02 8.489171e-03 6.754494e-02
## X217521_at 1.209064e+00 8.831740e-02 5.663197e-01 1.620382e-02 1.558661e-02
## X218002_s_at 4.822983e-01 8.628989e-01 8.612831e+00 3.881347e+00 1.583261e-02
## X218061_at 2.585945e-01 2.750852e-01 8.870645e-03 1.048366e-02 3.701778e-01
## X219485_s_at 3.330328e-02 9.498521e-01 4.281502e-02 6.343215e-01 3.282792e+00
## X219787_s_at 1.029905e+00 2.552353e-07 1.119106e-01 6.332256e-04 3.553712e+00
## X220017_x_at 8.080092e-02 2.179668e-01 2.107359e-01 2.594644e-03 1.507013e-01
## X220114_s_at 1.842361e+00 3.171076e+00 5.662664e-01 7.993020e-02 1.117116e+01
## X220116_at 2.212507e+00 2.730739e-01 9.252060e-02 1.527523e+00 6.512377e-01
## X220148_at 9.870667e-01 4.286314e+00 5.388917e-01 5.861011e-01 2.797069e-01
## X220491_at 1.852214e+00 2.312798e-03 3.471432e-01 1.043253e-01 2.227152e-02
## X220496_at 8.547977e+00 1.261983e+01 2.762784e+00 5.339283e-01 2.884875e+00
## X36829_at 4.030746e-02 1.801704e-01 6.343817e-01 3.575752e-01 7.201744e-01
## Dim.76 Dim.77 Dim.78 Dim.79 Dim.80
## X200606_at 4.020345e-01 1.970197e+00 2.860641e-03 4.556341e-01 9.554782e-02
## X200734_s_at 9.087730e-02 1.114960e-02 3.486134e-03 3.674176e-02 1.699859e-02
## X200882_s_at 4.686021e-01 3.868205e-01 2.454283e+00 2.232039e+00 1.282746e-01
## X200910_at 1.322801e+00 1.039919e+00 1.054887e+00 3.947905e+00 1.035347e+00
## X200954_at 1.602002e-01 2.709028e-01 1.210753e-01 3.779956e-01 7.358570e-01
## X201128_s_at 2.537257e-01 3.291624e-01 3.787421e+00 5.761046e+00 2.001975e+00
## X201184_s_at 3.963986e-01 1.138217e-07 4.727303e-01 1.259867e-01 1.179004e-03
## X201293_x_at 1.149157e-01 1.152936e-02 2.152158e-02 6.286069e-02 7.962745e-02
## X201398_s_at 3.942386e-01 5.892124e-01 3.708876e-02 1.080091e+00 2.462373e-02
## X201441_at 6.239470e-01 1.034525e-01 2.072508e+00 8.761867e-03 7.038076e-02
## X201453_x_at 4.501259e-01 3.325334e+00 9.770398e-01 1.452963e-01 5.220508e-01
## X201516_at 1.809472e-01 2.613326e-02 1.319738e+00 5.163391e-02 1.020195e+00
## X201527_at 5.048854e-02 1.149068e+00 5.243866e-01 7.097093e-02 5.277075e-01
## X201531_at 3.245450e-01 8.857970e+00 4.943430e-01 3.753731e-01 6.475527e-01
## X201577_at 2.403069e+00 3.461233e-01 4.564241e-01 1.011916e+00 6.115228e-01
## X201584_s_at 3.047042e+00 2.287764e+00 1.169770e+00 1.608189e-04 7.366280e-02
## X201656_at 5.859551e-01 1.195068e+00 3.470061e-03 6.711212e-01 1.635577e-02
## X202541_at 6.508694e-03 3.896278e-02 3.129363e-01 9.756528e-01 1.034068e-01
## X202737_s_at 6.570485e-01 1.082123e-02 2.998734e-01 2.853380e-01 1.123142e-01
## X202861_at 6.845078e-01 2.032459e-02 6.826473e-03 2.429137e+00 2.401896e-01
## X202940_at 6.741243e-02 4.940421e-04 4.031737e-03 1.434972e-01 2.740866e-02
## X202963_at 5.943477e-02 3.903193e-03 6.316475e-01 3.031497e-01 2.049005e-02
## X203316_s_at 1.386457e+00 1.693238e-01 1.210569e-02 1.116435e-01 3.573093e-01
## X203554_x_at 3.990005e+00 1.563585e+00 3.120730e-02 2.954232e-03 3.470708e-01
## X203755_at 3.749546e+00 2.926848e-03 1.649676e-01 2.250293e-01 1.408706e+01
## X204018_x_at 1.885541e-01 1.523015e-02 3.893876e-02 2.111015e-01 9.137620e-02
## X204301_at 1.486834e-02 2.075368e-02 2.568844e-03 2.651842e-01 6.899391e-02
## X204428_s_at 4.748695e-02 1.104277e-01 2.432292e+00 5.570556e+00 9.538188e-01
## X204641_at 5.744433e-01 7.268384e-03 4.368686e+00 1.611822e+00 3.286421e+00
## X204977_at 1.984218e+00 4.354760e-01 3.739841e-01 9.871897e-01 2.427491e-02
## X205019_s_at 1.157805e+00 4.166718e-01 1.202112e-02 6.932520e-01 6.769911e-01
## X205086_s_at 7.936578e-01 4.476538e-01 8.098010e-02 1.794165e-02 2.791061e-02
## X205298_s_at 3.341186e-03 1.606277e-03 1.127707e-01 9.406478e-03 5.366028e-02
## X205306_x_at 5.821123e-01 7.442237e-01 8.814179e-04 1.494893e+00 5.455995e-02
## X205392_s_at 1.453117e+00 3.130609e+00 9.544848e-01 2.311700e+00 7.872793e+00
## X205440_s_at 3.255442e-01 8.888859e-02 2.105655e-01 5.909163e-01 1.607244e-01
## X205531_s_at 8.834624e-01 8.971668e-04 2.261850e+00 8.810094e-02 1.506538e+00
## X205554_s_at 5.459469e-01 8.390759e-01 3.743482e-03 1.671840e+00 6.871669e-01
## X205740_s_at 1.369006e+00 4.939685e-02 2.732864e-01 4.778628e-01 1.462388e-01
## X205819_at 1.457389e-01 3.458313e+00 2.047623e-01 4.692097e-01 1.179790e+00
## X205858_at 8.500297e-01 6.452753e-04 5.033332e-01 3.246233e-02 7.236469e-03
## X205866_at 3.641132e-01 1.112437e+00 1.964840e-03 6.103573e-02 7.265083e+00
## X205890_s_at 1.252320e-02 1.636399e+00 1.139271e-01 6.384096e-01 9.987881e-02
## X205911_at 1.813541e+00 4.138158e+00 3.617753e+00 5.504801e-02 1.582121e-01
## X206380_s_at 5.162354e+00 1.611768e-01 8.319656e-01 5.556960e-01 5.968279e+00
## X206453_s_at 1.444711e+00 3.326235e-01 1.767333e+00 1.275443e+00 1.080187e+00
## X206643_at 3.568609e-02 4.890072e-01 1.238976e-03 6.148529e-03 9.501069e-03
## X206680_at 5.601163e-02 5.503749e-02 1.320527e-02 3.637173e-01 2.913813e+00
## X207076_s_at 4.221583e+00 2.068926e+00 8.463338e-02 5.432790e+00 1.581334e-01
## X207218_at 8.832724e+00 1.743031e+00 9.686641e-02 3.636831e-01 1.378032e+00
## X207262_at 6.324741e-04 2.302608e+00 3.977992e-01 3.211972e-05 2.587831e+00
## X207330_at 3.678334e-02 2.719457e-02 3.451717e-03 1.365632e-01 2.881670e-02
## X207609_s_at 1.129209e+01 1.449969e+00 4.700286e-01 5.270659e+00 1.039266e+00
## X207804_s_at 4.878056e-05 3.368194e-03 2.647922e+00 1.406925e-01 1.290391e+00
## X207828_s_at 7.257544e-02 2.616881e-02 5.711526e+00 6.512989e-01 1.388393e+00
## X207995_s_at 1.391193e-03 1.477347e+00 2.824957e+00 2.445880e+00 4.828321e+00
## X208079_s_at 2.155296e-01 3.224374e-01 3.975551e+00 3.762844e+00 7.144227e-01
## X208147_s_at 1.812575e-01 5.016937e-02 8.571201e-01 3.136127e+00 3.434380e-01
## X208816_x_at 4.836369e-01 1.504969e+00 2.702378e+00 5.633309e-01 7.442773e-01
## X209189_at 2.190097e-01 1.422047e+01 6.117455e-05 2.763997e-01 5.145120e-01
## X209219_at 1.399911e+00 8.541140e+00 8.200079e-01 4.420706e-01 3.569194e-02
## X209335_at 1.624458e-01 9.054086e-01 9.560998e-01 5.743122e-02 2.670390e+00
## X209365_s_at 2.235888e-04 4.383922e+00 1.357013e-01 6.455832e-01 5.551951e+00
## X209447_at 1.422386e+00 4.541190e-01 1.980911e+00 1.730164e-01 6.715795e-01
## X209458_x_at 2.540351e-01 2.511526e-02 4.133125e-02 3.202303e-02 1.865464e-02
## X209821_at 3.591078e-01 1.245733e-03 5.546140e-01 6.201521e-01 9.317420e-03
## X209825_s_at 3.064747e-02 1.439999e+00 4.747661e-02 1.865825e-01 2.535051e-03
## X210095_s_at 3.310090e-03 1.844678e-01 4.919767e-01 1.853737e+00 1.639907e-04
## X210481_s_at 4.741181e+00 5.002429e-07 3.453275e+00 2.789334e+00 3.983179e+00
## X210909_x_at 1.379993e-02 8.030288e-03 6.846750e-01 3.352631e-01 1.311536e+00
## X211023_at 7.676007e-02 8.472629e-02 1.258773e+00 9.031930e-02 1.919246e-01
## X211378_x_at 1.045215e-01 2.061473e-01 4.177580e-02 8.197327e-03 2.086951e-02
## X211628_x_at 2.661366e-02 6.905302e-02 5.966012e-01 3.668971e-01 8.910131e-03
## X211699_x_at 3.303687e-03 3.208329e-03 1.816966e-04 1.150913e-01 8.476986e-02
## X211745_x_at 2.448304e-03 1.778373e-02 2.243256e-02 2.861429e-03 2.796815e-02
## X211765_x_at 2.113381e-01 5.808217e-05 1.437820e-03 9.713978e-02 4.097652e-05
## X211978_x_at 1.219909e-05 4.063305e-03 4.064725e-02 1.548907e-01 1.100324e-01
## X212149_at 2.496277e-01 4.442235e-02 4.567599e-03 3.024972e-04 4.804678e-01
## X212551_at 1.708595e-02 6.402995e-01 1.459851e+00 1.284141e-01 4.192838e-01
## X212554_at 8.250288e-02 1.082597e-01 3.014698e-01 2.583197e-01 1.099909e-01
## X212661_x_at 4.596440e-06 2.191475e-02 2.341016e-01 7.582781e-02 9.699921e-03
## X213068_at 3.360614e-02 4.491976e-01 8.614939e-02 6.122379e-02 1.333064e-01
## X213629_x_at 1.048807e-01 9.033020e-02 8.224353e-01 3.452001e-04 3.359234e-02
## X214414_x_at 6.641881e-01 1.009973e-01 1.692418e-01 5.662654e-02 7.191760e-01
## X214421_x_at 8.067903e-02 8.091879e-03 6.781297e-03 3.358917e-02 4.654466e-03
## X214710_s_at 2.241602e+00 3.485959e-02 3.690276e-01 6.430358e-03 7.091376e-01
## X215138_s_at 1.881624e-02 1.091506e-01 4.101822e-02 1.402820e-02 6.940254e-02
## X215330_at 1.026096e-02 1.741674e-03 3.482305e-03 1.708212e-02 3.377534e-02
## X215768_at 4.231152e-03 1.040042e-01 3.246091e-02 5.765241e-01 4.447049e-04
## X216025_x_at 1.126532e-01 1.136763e-01 3.264728e-02 4.458924e-03 6.556357e-02
## X216661_x_at 1.220531e-01 1.088571e-02 3.548353e-02 2.378202e-02 2.205682e-02
## X216782_at 4.491074e-04 5.686659e-02 4.545649e-02 6.239691e-02 2.110755e-02
## X217165_x_at 9.593580e-03 1.031261e-01 1.592315e-01 6.141459e-03 3.035238e-01
## X217319_x_at 2.045181e+00 2.631702e-01 6.786239e-01 3.113240e+00 1.052626e+00
## X217414_x_at 1.493847e-02 1.915641e-03 2.048617e-04 8.984107e-02 1.056225e-01
## X217521_at 4.104796e-01 1.290096e-02 1.558836e-02 1.413994e-01 7.091343e-01
## X218002_s_at 7.771832e-02 4.914573e+00 1.014790e-02 5.579120e+00 1.846066e-02
## X218061_at 5.565600e-01 1.866204e+00 3.680427e-01 8.401718e-02 3.028761e-02
## X219485_s_at 1.483911e-01 1.659819e-01 7.883308e-01 1.656889e-01 2.078531e-01
## X219787_s_at 1.272325e+00 2.862843e+00 2.059819e+01 1.026755e+01 1.873650e+00
## X220017_x_at 3.490390e-02 2.893524e-02 3.689663e-02 1.142544e-02 2.733935e-02
## X220114_s_at 7.822063e+00 7.232448e-02 5.653822e+00 2.613785e+00 1.246780e-02
## X220116_at 1.527452e+00 6.180493e-01 5.622225e-01 3.865408e-01 9.925824e-02
## X220148_at 2.601856e+00 3.135203e+00 1.851647e-01 2.668885e+00 4.897845e-02
## X220491_at 1.798817e+00 5.106381e-01 2.691975e-01 7.123795e-02 2.276963e-02
## X220496_at 1.305580e+00 3.820252e-01 1.493685e+00 4.874758e-01 5.436812e+00
## X36829_at 5.830931e-01 2.401417e-01 1.710166e-02 2.492538e+00 3.066551e-01
## Dim.81 Dim.82 Dim.83 Dim.84 Dim.85
## X200606_at 1.649666e-01 1.676545e-02 1.863206e-01 9.249617e-02 4.403576e-01
## X200734_s_at 3.395380e-01 6.952262e-02 4.573482e-02 7.406411e-01 4.442981e-02
## X200882_s_at 2.127783e-02 7.776119e-03 1.178494e+00 5.599846e+00 6.913939e-01
## X200910_at 2.530032e-01 2.171389e+00 2.583042e-01 1.904098e+01 3.897005e-01
## X200954_at 3.143051e-02 2.940658e-02 6.534474e-02 5.510757e-01 5.498394e-04
## X201128_s_at 4.812774e-01 5.996937e-01 8.474176e-01 2.726009e+00 1.943090e-01
## X201184_s_at 1.524010e-02 3.232926e-01 9.860019e-02 1.652428e-04 1.419230e-02
## X201293_x_at 2.919805e-02 6.183899e-02 9.979791e-03 1.252086e-05 2.340318e-03
## X201398_s_at 8.542704e-02 4.151428e-01 5.347967e-01 9.376683e-03 1.976029e-01
## X201441_at 1.574944e+00 6.828728e-02 8.853747e-02 1.449987e+00 2.876321e-03
## X201453_x_at 6.611763e-01 7.255596e-01 1.384478e-01 1.689219e-01 1.309881e-01
## X201516_at 2.584042e-02 4.559184e-02 6.767020e-02 3.932062e-02 2.949406e-01
## X201527_at 1.346521e-01 2.996910e-02 3.694562e-01 1.809751e-01 2.097149e-01
## X201531_at 2.709165e-01 9.588209e-01 6.254206e-01 1.855353e+00 3.962822e+00
## X201577_at 5.378440e+00 2.915857e+00 1.636934e-01 1.870273e-02 5.334246e-02
## X201584_s_at 1.926280e-01 2.131033e-01 5.892507e-01 1.945793e-01 2.885365e-01
## X201656_at 8.574857e-01 5.690692e-02 5.785046e-01 3.496908e-01 4.444986e-02
## X202541_at 7.303788e-04 5.052828e-01 5.808573e-02 3.906330e-02 8.256572e-07
## X202737_s_at 2.987049e-01 4.436450e-02 5.628335e-03 8.828162e-02 3.587519e-02
## X202861_at 8.963064e-01 3.189490e+00 4.473231e-01 1.691939e-01 1.796676e+00
## X202940_at 1.256240e-01 6.855596e-04 1.324374e-02 5.295197e-03 4.965609e-02
## X202963_at 8.048851e-01 5.735558e-01 2.944041e-02 9.533998e-01 4.298380e-04
## X203316_s_at 9.445396e-02 8.032506e-01 1.506665e+00 4.184949e-01 1.077604e+01
## X203554_x_at 1.161072e+00 7.683226e+00 1.801582e+00 4.780402e+00 1.394975e+00
## X203755_at 1.446669e+01 3.095203e-02 8.458238e-02 3.767850e+00 2.531355e+00
## X204018_x_at 2.559889e-02 7.899354e-02 1.010826e-02 1.380788e-04 4.554320e-02
## X204301_at 5.906645e-02 5.882468e-02 4.055247e-03 2.150524e-02 4.213562e-02
## X204428_s_at 1.498788e+01 5.155453e+00 6.686759e-01 2.420221e-04 1.165266e+01
## X204641_at 1.933485e-01 1.019073e+01 2.903911e+00 2.067053e+00 1.418300e-02
## X204977_at 1.147156e-03 2.535049e-02 2.386990e-02 5.350333e-02 8.125357e-02
## X205019_s_at 2.113682e+00 2.179734e+01 1.504402e-01 5.649336e-01 6.905488e-02
## X205086_s_at 6.087976e-03 7.265961e-01 1.743682e-02 5.405349e-02 5.276286e-02
## X205298_s_at 9.921406e-07 5.386379e-02 7.528722e-02 1.217368e-02 1.314215e-01
## X205306_x_at 1.386220e+00 2.297272e-01 4.978488e-01 1.632972e-01 5.639932e-03
## X205392_s_at 3.191602e+00 2.992553e-02 2.251481e-01 2.633883e-01 2.888819e+00
## X205440_s_at 3.235696e-01 3.361304e-04 1.347705e-02 2.298470e-02 7.281496e-02
## X205531_s_at 1.613809e+00 2.054324e+00 4.147717e-01 8.212915e-01 2.989240e-01
## X205554_s_at 3.644112e-02 9.093443e-02 4.663901e+00 6.495990e+00 9.221493e-01
## X205740_s_at 6.559415e-01 5.153091e-01 6.837342e-02 2.378096e-05 8.573443e-01
## X205819_at 1.538417e+00 6.752808e-01 1.290039e+00 2.297915e-03 4.586961e-02
## X205858_at 4.351546e-01 4.010312e-03 2.073213e-01 1.117714e-01 7.002954e-02
## X205866_at 2.314185e-02 5.345663e-02 5.217135e+00 4.485313e+00 1.129914e+00
## X205890_s_at 4.691348e-01 4.541697e-01 1.333179e-01 1.322013e-01 2.718255e-03
## X205911_at 9.438394e-03 8.035572e-01 3.855819e+00 2.878238e+00 4.045546e-01
## X206380_s_at 1.081488e+00 6.711905e-01 1.211027e-01 5.852646e-01 2.274521e-03
## X206453_s_at 4.256284e-02 1.848615e-01 1.243384e+00 1.403699e+00 4.662569e-01
## X206643_at 2.927694e-01 8.394631e-01 5.299978e-02 7.929793e-02 2.760562e-03
## X206680_at 1.528369e-01 6.056753e-01 5.915777e+00 1.233569e+00 3.979129e-02
## X207076_s_at 1.647280e+00 1.447636e+00 6.902919e-01 9.139457e-02 2.448533e+00
## X207218_at 9.784166e-01 2.108437e-01 1.943901e+00 2.272652e-02 5.761383e-01
## X207262_at 1.131871e+00 1.890277e-01 5.886760e-02 2.616301e-01 5.645710e-03
## X207330_at 3.643682e-02 6.035344e-04 1.840338e-03 1.089360e-01 6.621825e-02
## X207609_s_at 4.303500e+00 1.537322e+00 4.894761e+00 2.971442e-01 2.374413e+00
## X207804_s_at 2.718774e+00 3.006575e-01 2.469833e-01 3.382246e+00 5.826833e-02
## X207828_s_at 9.094333e-02 6.804487e-02 1.494354e+01 9.442730e-02 7.490412e+00
## X207995_s_at 2.807343e+00 2.261773e-02 4.725882e-02 1.943675e+00 5.660245e-01
## X208079_s_at 1.085384e-01 2.101412e-02 7.426458e-02 5.581816e-01 1.464892e+00
## X208147_s_at 2.390815e-01 1.749606e+00 9.114419e-02 1.659209e-02 1.027992e+00
## X208816_x_at 7.754464e-02 1.531483e-01 7.618726e-01 1.183607e-01 1.145657e-02
## X209189_at 4.066639e-01 3.472966e-01 1.220718e+00 1.040378e+00 2.397507e+00
## X209219_at 5.328884e-02 1.841140e-01 8.253311e-01 4.033883e-01 1.035301e+00
## X209335_at 6.479948e-01 6.023944e+00 1.570389e-01 4.282615e-01 3.583039e-01
## X209365_s_at 6.011894e+00 4.521199e+00 9.768311e-01 5.983190e-01 1.443998e+01
## X209447_at 6.041429e-02 3.216534e-02 7.815080e-02 6.817776e-01 4.769190e-02
## X209458_x_at 2.982236e-03 4.882972e-02 4.679191e-02 3.434203e-02 7.868327e-02
## X209821_at 4.829503e-02 4.045710e-01 2.537364e-02 2.728107e-02 5.032509e-02
## X209825_s_at 8.833132e-02 3.670062e-01 2.723750e-02 2.994881e+00 9.774702e-02
## X210095_s_at 3.114903e+00 7.797746e-05 1.204393e-01 2.321055e-03 1.180438e+00
## X210481_s_at 6.667953e-01 4.652481e-02 2.224880e+00 1.250290e-01 2.204381e-01
## X210909_x_at 7.734244e-01 1.092849e-01 1.481554e-01 2.301828e-02 2.808946e-02
## X211023_at 7.232996e-02 1.133045e-02 1.944875e-02 1.729750e-01 2.077424e-01
## X211378_x_at 4.918863e-01 2.414593e-02 5.037425e-02 6.296007e-02 6.739705e-02
## X211628_x_at 3.614914e-01 6.230685e-02 4.451967e-01 1.946353e-01 6.594553e-02
## X211699_x_at 1.679351e-01 1.411327e-02 6.246708e-02 2.087990e-01 3.976353e-01
## X211745_x_at 2.575465e-02 7.245277e-02 2.351428e-02 2.608042e-02 9.416734e-03
## X211765_x_at 9.816175e-03 2.126181e-01 2.296664e-01 3.037939e-02 1.493907e-01
## X211978_x_at 6.671897e-02 1.991131e-01 7.241689e-02 5.730935e-02 7.011579e-02
## X212149_at 5.691502e-02 2.140851e-01 5.056447e-01 5.898856e-02 9.509410e-02
## X212551_at 1.167054e-01 1.956877e-01 5.798260e-01 1.058497e+00 1.933986e+00
## X212554_at 5.077915e-02 1.261919e-01 2.560736e-02 1.216980e+00 1.595448e-01
## X212661_x_at 6.785839e-02 4.911602e-02 5.564360e-02 3.989475e-02 5.321295e-02
## X213068_at 3.685618e-01 6.885744e-02 3.924081e-03 3.329155e-01 2.760972e-02
## X213629_x_at 1.531253e-03 9.353393e-02 9.861476e-03 1.692819e-01 1.404646e-03
## X214414_x_at 4.821183e-02 2.390404e-01 2.642078e-01 5.271785e-03 1.232003e+00
## X214421_x_at 6.961533e-02 5.150986e-02 5.253387e-02 5.424598e-02 8.763418e-02
## X214710_s_at 2.481848e+00 4.795134e+00 5.883215e-01 2.743951e+00 4.823978e-01
## X215138_s_at 3.713493e-05 4.096610e-02 7.611708e-02 1.953078e-02 1.016782e-02
## X215330_at 7.133400e-03 1.496841e-02 3.702719e-03 9.800489e-03 1.012207e-02
## X215768_at 5.779532e-01 4.706200e-02 3.205761e-03 9.221041e-05 2.171032e-01
## X216025_x_at 1.716890e-02 6.072783e-02 7.248958e-04 6.569647e-02 1.728976e-02
## X216661_x_at 1.559443e-01 8.601153e-03 3.239441e-02 6.567547e-02 2.812258e-02
## X216782_at 1.366434e-01 1.738626e-01 3.527138e-02 7.430552e-04 1.056380e-04
## X217165_x_at 3.848688e-03 5.059025e-02 1.313926e-01 1.048294e-01 3.449873e-02
## X217319_x_at 2.535602e-02 1.825761e+00 1.089209e+00 5.248811e-01 5.775467e-02
## X217414_x_at 5.083788e-02 1.032657e-04 5.464715e-03 9.758082e-02 9.345418e-03
## X217521_at 2.358469e+00 2.264341e-01 6.182351e-01 1.401396e+00 8.058143e-01
## X218002_s_at 3.530855e-01 1.101646e+00 2.303186e+00 2.464285e+00 7.119599e+00
## X218061_at 9.239151e-03 1.829392e-02 1.320881e-01 5.445776e-01 3.257759e-01
## X219485_s_at 8.062996e-01 1.322550e-01 1.241525e-01 1.656137e-02 1.879087e+00
## X219787_s_at 1.330353e-01 1.169416e+00 2.324593e+00 2.195118e-01 1.302465e+00
## X220017_x_at 3.551275e-03 3.212630e-03 1.812531e-03 1.276325e-02 1.851615e-02
## X220114_s_at 4.305781e+00 2.659008e-01 1.831194e+00 5.375326e+00 2.169599e-02
## X220116_at 2.354393e-02 4.402283e-02 7.432413e-02 2.892341e-01 8.617127e-02
## X220148_at 2.362727e+00 3.124664e-01 6.261886e-01 5.256676e-04 1.034356e-06
## X220491_at 6.077095e-02 9.231105e-02 1.599354e-01 2.760253e-01 4.896826e-02
## X220496_at 3.765037e-01 1.122374e+00 1.860167e+01 4.130553e+00 7.148209e-01
## X36829_at 7.541466e-01 2.235146e+00 1.664087e+00 5.904740e-04 3.381126e+00
## Dim.86 Dim.87 Dim.88 Dim.89 Dim.90
## X200606_at 5.681243e-01 1.425144e-01 5.258892e-02 1.592013e-01 1.354111e-01
## X200734_s_at 3.315285e-02 3.885157e-02 1.423083e-03 2.305283e-02 3.945859e-02
## X200882_s_at 4.219315e+00 1.199304e+00 5.879827e-01 1.245579e-01 4.936502e-01
## X200910_at 1.139199e+01 1.390982e+01 4.207953e-02 9.078054e-03 2.445521e-01
## X200954_at 1.551694e-02 6.206567e-02 1.428921e-02 3.524661e-01 1.203558e-05
## X201128_s_at 3.979529e-01 3.190386e-01 4.592673e-01 2.010738e-03 1.282613e-03
## X201184_s_at 4.583102e-02 3.855243e-01 8.990094e-04 3.308204e-01 2.573380e-02
## X201293_x_at 9.526473e-02 4.112340e-03 7.041606e-04 1.479186e-02 6.173097e-03
## X201398_s_at 8.390124e-02 1.785817e-02 7.412484e-01 5.291971e-01 4.591968e-01
## X201441_at 1.258066e-05 1.216401e-01 2.568759e-03 5.450510e-02 1.239151e-06
## X201453_x_at 7.534408e-02 7.001403e-01 1.817758e-01 6.639564e-02 5.477811e-01
## X201516_at 2.939244e-01 1.835022e+00 1.943937e-01 8.602996e-01 9.871610e-02
## X201527_at 6.257055e-02 2.813252e-04 1.431618e-01 3.881956e-01 1.263364e-01
## X201531_at 1.684039e-01 5.844585e-01 1.515173e-02 1.053427e-01 1.159452e+00
## X201577_at 2.569620e+00 2.560124e+00 8.667003e-02 4.295647e-01 1.024216e-02
## X201584_s_at 5.319761e-01 7.345831e-01 2.104937e-01 2.618949e-03 3.009492e-02
## X201656_at 2.937204e-01 1.034209e-01 2.014304e-01 8.483840e-02 1.039657e-03
## X202541_at 1.801649e-03 2.317381e-01 1.031390e-01 3.120664e-03 2.006209e-01
## X202737_s_at 3.002942e-01 1.457399e+00 8.933618e-02 8.406988e-02 1.607226e-06
## X202861_at 3.755219e+00 1.660704e+00 1.724994e+00 1.568412e+00 1.203573e+01
## X202940_at 1.411975e-01 1.565554e-04 1.443890e-04 1.264281e-01 3.563018e-02
## X202963_at 3.045486e-02 4.432941e-01 1.074400e-02 2.855396e-01 2.057298e+00
## X203316_s_at 1.356443e+00 1.868385e+00 5.409624e+00 1.081079e+00 6.703920e-01
## X203554_x_at 7.011929e-03 3.274617e-01 4.409089e-01 8.377115e+00 1.297452e+01
## X203755_at 1.004813e+00 7.910773e-01 4.498941e-03 1.019382e+00 2.347058e-01
## X204018_x_at 5.020388e-02 1.136421e-02 7.595463e-02 8.360055e-04 5.730532e-01
## X204301_at 2.805426e-01 1.704589e-01 2.762868e-05 1.001026e-02 1.790221e-04
## X204428_s_at 4.600290e-01 1.526290e+00 1.276736e-01 1.637057e-01 3.472124e-01
## X204641_at 1.152952e+00 2.931089e-01 1.592256e-02 3.752661e+00 6.933764e-01
## X204977_at 4.516929e-03 1.105270e-01 2.652934e-03 1.716424e-01 2.351254e-02
## X205019_s_at 2.700968e-01 2.427675e+00 2.287406e+01 1.095333e+01 2.235145e+00
## X205086_s_at 4.804540e-02 2.286707e-02 2.389371e-01 1.121858e-01 1.174847e-02
## X205298_s_at 7.337197e-03 1.283827e-02 3.363904e-02 2.254834e-02 1.613703e-02
## X205306_x_at 2.390270e-02 2.184447e-01 8.446337e-03 6.674702e-01 1.891922e-01
## X205392_s_at 7.543456e-03 1.509400e+00 3.050540e-03 2.082518e-01 2.800367e-01
## X205440_s_at 1.784548e-01 2.862496e-02 1.831675e-03 2.610252e-01 1.308462e-02
## X205531_s_at 1.348154e+00 1.097117e-02 1.224153e-02 6.908588e+00 1.711376e+00
## X205554_s_at 1.563629e+00 6.234149e-02 5.205388e-01 1.001393e+01 1.278041e+00
## X205740_s_at 6.676369e-03 5.111907e-02 1.187000e-03 8.445531e-03 8.193994e-03
## X205819_at 3.908109e-02 4.675779e-01 3.708593e-01 1.208639e-01 3.063174e-01
## X205858_at 2.187953e-03 1.165225e-01 3.819936e-01 1.289059e-02 1.010029e-02
## X205866_at 3.534684e-01 7.457435e+00 1.070719e+00 2.512348e+00 1.999334e+00
## X205890_s_at 4.486694e-03 1.518781e-01 3.499831e-03 1.446402e-03 6.814971e-03
## X205911_at 2.889005e-01 3.134842e-01 1.658019e+00 2.048360e+00 2.524567e-01
## X206380_s_at 5.333411e-01 1.047476e+00 4.484837e-01 1.043352e-01 1.209404e-01
## X206453_s_at 3.653255e+00 6.154552e-01 4.612561e-02 2.442190e-01 1.227535e+00
## X206643_at 3.876294e-01 2.313897e-01 2.658815e+00 3.707739e-01 3.694529e-01
## X206680_at 2.521311e+00 6.220733e-01 1.294985e-01 6.813568e-01 1.584007e-01
## X207076_s_at 8.664605e-01 9.270449e-01 6.109293e-01 3.304103e+00 1.305475e+00
## X207218_at 1.441525e+00 6.920932e-01 3.139869e-01 1.970339e-02 6.443670e-02
## X207262_at 1.499975e+00 4.802408e-02 1.216389e-02 6.918841e-01 1.655037e-02
## X207330_at 5.420581e-04 3.270687e-02 3.900194e-03 4.899126e-02 2.662615e-02
## X207609_s_at 7.194184e+00 7.290803e-01 4.514310e-01 3.175037e+00 5.932784e-01
## X207804_s_at 7.103600e-01 2.294773e+00 1.098928e-01 2.441339e-01 7.829586e-03
## X207828_s_at 3.176037e+00 1.182120e+00 7.944129e+00 7.911949e+00 4.967539e-03
## X207995_s_at 1.460074e+00 7.933855e+00 1.211139e+00 3.352072e+00 1.785662e+00
## X208079_s_at 8.182419e-06 3.942879e-02 4.039406e-01 2.873088e-02 2.328778e-01
## X208147_s_at 2.257533e+00 2.240400e+00 1.870822e-02 4.686748e-01 3.834057e-02
## X208816_x_at 1.152400e-02 8.802450e-01 3.081179e-04 5.736249e-02 1.188473e-01
## X209189_at 5.267696e-02 2.267363e+00 1.345953e-03 3.566663e-02 1.833188e+00
## X209219_at 5.998433e-02 1.659688e+00 2.911668e-01 1.167434e+00 4.931676e-01
## X209335_at 7.180472e+00 5.380615e+00 2.133144e+00 7.815793e-01 2.991435e+00
## X209365_s_at 8.814426e-01 1.064033e+00 1.262774e+01 2.122463e+00 4.550946e+00
## X209447_at 1.086128e-02 4.844565e-01 6.447299e-01 1.439698e-01 9.313649e-02
## X209458_x_at 1.562546e-01 3.321499e-02 5.609954e-02 2.174454e-01 2.705139e-02
## X209821_at 2.840416e-01 6.881869e-02 8.518963e-03 4.084232e-01 2.524423e-01
## X209825_s_at 3.585753e-01 1.316663e+00 2.749735e-01 7.716518e-01 5.787218e-02
## X210095_s_at 6.898173e-02 3.150826e-01 7.591097e-01 8.156636e-03 1.165293e-01
## X210481_s_at 6.101686e-02 6.168149e+00 6.772113e-01 3.232087e+00 1.682485e+00
## X210909_x_at 3.313165e-04 3.642039e-02 1.258507e-04 8.891756e-01 1.466595e-01
## X211023_at 2.096735e-01 8.623079e-02 1.439254e-01 1.226549e-04 1.967574e-02
## X211378_x_at 1.887655e-01 2.341908e-02 3.986373e-01 1.121946e-01 9.614748e-01
## X211628_x_at 1.917976e-02 2.654438e-02 1.028113e+00 7.847547e-02 2.841594e-02
## X211699_x_at 3.352293e-02 4.258949e-01 1.291621e-01 9.079062e-02 9.654398e-02
## X211745_x_at 1.189405e-03 9.193479e-02 1.536126e-01 6.812314e-02 9.476548e-02
## X211765_x_at 2.096008e-01 4.482239e-05 8.280188e-03 3.715808e-01 3.321497e-01
## X211978_x_at 2.577987e-01 1.758555e-01 3.648775e-01 5.408396e-03 2.003316e-01
## X212149_at 1.155721e-02 1.375857e+00 9.282687e-02 3.507503e-03 1.319719e-01
## X212551_at 9.852476e-02 2.228131e-01 3.360324e-01 2.604965e-01 1.078467e+00
## X212554_at 7.015445e-02 9.966309e-02 2.992465e+00 5.257498e-03 4.611119e+00
## X212661_x_at 3.380655e-02 6.007194e-03 4.338157e-01 9.133806e-02 2.585267e-01
## X213068_at 1.755196e+00 2.730446e-01 9.500783e-02 1.147271e-01 2.007122e-01
## X213629_x_at 1.159843e-01 8.193483e-01 2.238310e-02 5.996959e-05 3.478689e-02
## X214414_x_at 2.083464e-02 3.784841e-01 7.866581e-02 6.068425e-01 5.434258e-01
## X214421_x_at 9.410319e-02 5.210046e-04 2.564347e-01 5.541787e-05 1.464497e-01
## X214710_s_at 1.086761e+00 1.205820e-01 1.099230e+01 5.384611e+00 9.536281e+00
## X215138_s_at 3.500230e-03 9.780235e-03 8.080234e-02 9.208393e-03 6.870878e-02
## X215330_at 1.046960e-02 1.551073e-01 1.502593e-01 1.919517e-02 2.063651e-01
## X215768_at 3.569790e-02 2.790246e-02 1.179547e-02 1.676200e-03 5.055570e-02
## X216025_x_at 9.965200e-02 2.428469e-01 1.715843e-03 3.178025e-02 4.682324e-02
## X216661_x_at 4.230095e-02 1.675322e-01 3.847566e-02 4.834843e-02 1.841771e-01
## X216782_at 1.355014e-01 1.301967e-01 5.255270e-03 1.826195e-03 3.929729e-02
## X217165_x_at 2.510011e-03 1.005301e-04 2.380882e-05 2.156540e-03 1.451402e-01
## X217319_x_at 4.508763e-01 2.992911e-01 2.027625e-01 1.811979e-02 6.285151e-01
## X217414_x_at 4.115753e-02 5.808369e-02 1.752294e-01 1.163574e-01 1.389966e-01
## X217521_at 3.754116e-01 2.391561e-01 3.040013e+00 4.240292e-01 1.171701e-01
## X218002_s_at 7.531397e+00 6.079391e+00 9.255509e-02 3.858158e-01 1.427023e-01
## X218061_at 4.658286e-01 8.624065e-01 2.122349e-02 3.398757e-01 2.422505e-01
## X219485_s_at 5.018603e-02 8.967513e-01 9.187830e-01 1.393737e-05 8.740963e-01
## X219787_s_at 4.617521e+00 1.442602e-01 2.525763e+00 1.320666e+00 7.405424e-01
## X220017_x_at 5.827550e-02 2.002021e-04 7.454966e-03 5.958266e-02 9.253208e-03
## X220114_s_at 1.154853e+01 3.743417e-02 1.957640e-01 2.362619e+00 2.774394e+00
## X220116_at 1.276146e-03 8.949206e-01 1.859964e-01 2.700570e-02 1.266518e-01
## X220148_at 1.557247e-01 1.965106e+00 4.032883e-01 6.998127e-01 3.184429e-03
## X220491_at 2.919235e-01 2.970229e-02 2.373995e-01 3.742534e-02 3.344794e-01
## X220496_at 3.105322e-03 3.973006e-01 8.261880e-01 3.719282e-02 3.491414e-01
## X36829_at 1.510043e+00 4.637114e-01 3.394321e+00 2.349704e+00 1.464298e+01
## Dim.91 Dim.92 Dim.93 Dim.94 Dim.95
## X200606_at 1.149299e-02 6.275604e-02 1.374969e-03 8.591614e-04 5.352737e-03
## X200734_s_at 2.499114e-02 1.462935e-02 5.841764e-02 6.486007e-04 2.624491e-03
## X200882_s_at 5.679858e-02 1.081875e-01 3.211764e-01 2.753637e-03 1.361196e+00
## X200910_at 4.351666e-01 3.351200e+00 1.162415e+00 3.257291e-01 1.715995e-01
## X200954_at 1.170325e-01 3.485328e-02 1.087011e-02 8.601050e-02 2.933264e-02
## X201128_s_at 4.669845e-01 2.284026e-01 4.672023e-02 4.525361e-03 3.817418e-01
## X201184_s_at 1.717525e-02 5.786511e-02 4.869892e-01 6.480179e-03 4.499791e-02
## X201293_x_at 5.729880e-01 9.938320e-03 2.469978e-04 2.950732e-01 2.958327e-01
## X201398_s_at 6.219065e-02 5.330174e-02 9.230214e-02 2.314452e-02 1.350641e-04
## X201441_at 4.978225e-01 6.860260e-02 5.497679e-02 9.312468e-02 4.641890e-03
## X201453_x_at 7.066104e-01 1.493858e-01 8.490557e-02 2.405148e-01 2.371778e-03
## X201516_at 2.371278e-03 8.526414e-02 1.456581e-01 1.364375e-02 1.176773e-01
## X201527_at 1.258560e-01 1.665029e-01 1.344928e-01 1.140464e-03 2.441877e-03
## X201531_at 3.018483e-01 4.192912e-03 7.382591e-02 3.149888e-03 2.218920e-02
## X201577_at 1.727479e-01 8.489495e-03 2.446140e-02 1.453151e-01 4.847272e-01
## X201584_s_at 2.178346e-01 4.192713e-01 3.417835e-01 1.567446e-03 4.212679e-03
## X201656_at 2.148650e-01 1.004100e-03 3.288614e-01 7.919868e-03 3.790454e-02
## X202541_at 1.578957e-01 1.416301e-01 3.992262e-02 2.855748e-02 3.228983e-03
## X202737_s_at 5.964139e-01 1.053003e-03 1.741500e-02 1.193985e-01 9.619372e-02
## X202861_at 3.598886e+00 6.062181e-01 1.975620e+00 1.663541e+00 2.259617e-01
## X202940_at 1.063287e-02 4.740242e-03 9.831242e-03 2.481779e-02 4.087221e-02
## X202963_at 2.483147e-02 3.958485e-02 3.223101e-02 1.624319e-01 4.691747e-01
## X203316_s_at 7.122054e-03 2.574007e+00 1.415364e+00 7.773290e-01 4.468072e-01
## X203554_x_at 5.380020e+00 3.611617e+00 1.715735e+01 3.623538e-02 5.560425e-01
## X203755_at 1.412815e+00 4.186138e-03 3.668292e-01 3.149676e-01 8.030424e-02
## X204018_x_at 7.079668e-02 1.922553e+00 5.866653e-02 5.749711e-02 2.291374e+00
## X204301_at 8.527303e-02 9.342505e-03 8.948462e-03 1.244755e-01 1.107667e-03
## X204428_s_at 4.565435e-01 7.450973e-02 2.337536e-02 2.877586e-03 5.333787e-01
## X204641_at 2.603071e+00 1.362968e+00 3.619139e+00 9.740558e-01 1.433515e-02
## X204977_at 1.231733e-01 9.928847e-02 9.605112e-02 8.080369e-02 3.094265e-01
## X205019_s_at 1.979276e+00 2.312680e-01 1.969754e+00 4.664982e+00 3.037656e-01
## X205086_s_at 2.532747e-01 3.344969e-03 5.326272e-02 1.625933e-02 2.971252e-03
## X205298_s_at 2.616515e-01 1.068836e-01 1.208707e-01 3.123847e-04 7.833172e-04
## X205306_x_at 1.615535e-01 1.791252e-03 4.066049e-02 8.228537e-02 8.268337e-04
## X205392_s_at 3.967455e+00 9.389983e-01 4.905574e-02 1.983896e+00 3.438029e-01
## X205440_s_at 4.155539e-01 5.765267e-02 6.117964e-03 2.969369e-03 5.494636e-04
## X205531_s_at 2.472776e-03 4.480060e-01 9.747182e+00 1.930381e-01 1.224117e+00
## X205554_s_at 2.289515e+01 1.232701e-01 7.000955e-02 1.308644e+00 1.114422e+00
## X205740_s_at 1.611442e-01 4.550426e-02 6.603584e-02 3.010577e-02 2.042242e-02
## X205819_at 7.724322e-01 1.067703e-05 4.999921e-02 6.431241e-02 3.757594e-02
## X205858_at 3.437510e-03 1.302458e-02 4.084732e-02 3.988447e-02 3.254234e-04
## X205866_at 1.763004e+01 1.261092e-02 2.384139e+00 7.150956e-02 3.493007e+00
## X205890_s_at 7.858443e-02 2.154687e-01 1.137146e-02 5.196384e-03 5.001305e-03
## X205911_at 4.143259e-02 5.546498e-02 9.198093e-02 1.771329e-01 8.859660e-02
## X206380_s_at 3.579634e-01 9.324952e-03 2.018443e-01 2.901954e-03 3.673603e-02
## X206453_s_at 8.177620e-03 3.618168e-01 8.280715e-03 6.510812e-03 9.522450e-03
## X206643_at 2.063782e+00 1.306881e+01 9.711809e-02 1.176948e+01 7.272741e+00
## X206680_at 1.548011e-01 7.247547e-02 4.101702e-04 1.829437e-01 7.814208e-03
## X207076_s_at 1.667265e-01 4.678119e-01 3.906534e+00 6.389979e-04 4.715238e-01
## X207218_at 4.183960e-02 5.814935e-01 1.593665e-03 1.000448e-02 8.306835e-03
## X207262_at 5.534951e-03 2.699248e-03 2.232853e-02 2.455546e-01 2.929466e-01
## X207330_at 3.025528e-02 2.711332e-03 8.812221e-02 2.596276e-02 3.471329e-04
## X207609_s_at 2.010103e+00 4.060090e-01 1.178607e-01 9.067357e-02 3.540255e-02
## X207804_s_at 6.316649e-01 1.153103e-01 2.956064e-03 9.603477e-02 1.950116e-06
## X207828_s_at 2.602393e-01 1.406243e+00 1.122400e+01 1.040269e+00 1.080179e-02
## X207995_s_at 2.919987e-02 4.269636e-03 2.803438e-01 2.503261e-01 1.188209e-01
## X208079_s_at 6.551953e-01 8.769581e-03 1.217260e-01 5.893281e-02 2.717716e-04
## X208147_s_at 6.852246e-01 3.259521e-05 1.024831e-02 5.039727e-01 2.882267e-01
## X208816_x_at 3.289614e-02 7.535840e-03 6.632781e-02 3.852804e-01 1.397273e-01
## X209189_at 4.229712e-01 1.296645e-01 1.435621e-01 3.757909e-01 4.288132e-02
## X209219_at 4.452887e-02 7.114310e-01 2.023157e-01 1.596442e-03 1.772153e-01
## X209335_at 2.837020e+00 4.031470e-01 1.066748e-01 6.089349e-02 9.059302e-02
## X209365_s_at 1.997882e-01 7.320805e-01 9.319132e+00 4.474167e+00 5.971259e-02
## X209447_at 5.305133e-02 4.664235e-02 8.385857e-03 2.635298e-02 2.738658e-02
## X209458_x_at 3.423279e-02 7.325775e-01 2.647696e-01 4.018234e-02 7.612736e+00
## X209821_at 4.019605e-02 8.348682e-03 1.643176e-03 1.302385e-02 4.089299e-03
## X209825_s_at 3.172140e-02 1.785371e-02 4.706090e-01 7.346938e-02 4.942784e-02
## X210095_s_at 6.050902e-01 5.303836e-03 1.162767e-02 1.464907e-02 7.509981e-03
## X210481_s_at 7.311132e-03 1.455645e-01 4.867787e-01 7.490540e-02 5.984889e-06
## X210909_x_at 2.582984e-01 8.334868e-02 9.356847e-02 1.420015e-01 2.833087e-01
## X211023_at 2.732454e-01 2.660292e-01 1.931580e-03 6.534854e-04 9.896933e-06
## X211378_x_at 5.533955e-01 6.862824e-02 9.981039e-01 1.022781e-03 2.344137e-02
## X211628_x_at 7.072723e-02 4.439402e-03 2.971089e-04 2.698885e-02 2.438504e-01
## X211699_x_at 3.580856e-01 2.739887e+00 1.847184e-02 4.998577e-01 9.956101e+00
## X211745_x_at 4.243242e-01 1.801002e-03 4.209303e-02 2.887987e-01 4.323130e-02
## X211765_x_at 9.895092e-02 9.210935e-02 6.633884e-03 9.925932e-03 1.735860e-02
## X211978_x_at 9.118855e-01 2.864755e+00 2.590000e+00 2.999254e-01 5.400866e-01
## X212149_at 4.205420e-01 4.042333e-03 5.734259e-03 4.553212e-01 2.740932e-01
## X212551_at 1.560436e-01 7.862743e+00 2.619594e+00 1.397164e+01 3.102927e+00
## X212554_at 6.824568e-01 1.385021e+01 4.796316e+00 2.559156e+01 2.574698e+00
## X212661_x_at 8.299922e-03 5.226074e-02 4.742014e-02 3.990564e-01 2.818348e-01
## X213068_at 1.725545e-01 5.529341e-02 1.974508e-01 2.179558e-01 6.752179e-04
## X213629_x_at 2.569993e-01 2.208236e-01 1.369377e-01 1.355841e-01 1.168951e-01
## X214414_x_at 2.020487e+00 1.606516e+01 1.054963e-04 8.514945e-01 3.817209e+01
## X214421_x_at 2.937546e-02 4.123454e-02 1.313617e-02 3.613151e-03 1.817421e-02
## X214710_s_at 3.199747e+00 1.610992e+00 8.265325e+00 9.727668e-01 1.189805e+00
## X215138_s_at 1.702597e-02 1.206414e-02 1.452618e-02 1.696304e-01 1.165510e-03
## X215330_at 2.218864e-02 5.941731e-02 2.293771e-03 5.989245e-03 4.040757e-03
## X215768_at 2.109244e-02 1.705694e-02 8.749156e-02 9.655215e-03 1.197035e-02
## X216025_x_at 2.933700e-03 1.381225e-01 1.602365e-02 2.870427e-03 3.054719e-01
## X216661_x_at 2.422498e-01 1.700669e-01 6.192869e-03 3.292832e-01 3.222701e-02
## X216782_at 3.605079e-06 1.487772e-02 3.924082e-04 7.637606e-02 2.250037e-02
## X217165_x_at 2.553514e-02 3.589754e-02 8.974999e-03 1.272926e-02 2.203940e-01
## X217319_x_at 1.370513e-01 7.150961e-02 4.659834e-02 1.616809e-01 2.553820e-01
## X217414_x_at 4.388094e-01 1.972451e-02 1.653111e-01 1.246730e-01 2.878894e+00
## X217521_at 1.677204e+00 1.358546e+01 1.043414e+00 1.711601e+01 7.189881e+00
## X218002_s_at 2.068993e+00 1.246559e+00 3.776641e+00 4.958066e-03 1.034165e-02
## X218061_at 2.483759e-03 1.997588e-02 1.708061e-03 1.197332e-01 1.016566e-02
## X219485_s_at 2.030250e-03 9.128579e-02 1.495625e-01 3.441270e-01 1.622531e-01
## X219787_s_at 1.307865e-02 9.402261e-02 6.496339e-01 8.645537e-02 4.378354e-04
## X220017_x_at 1.958631e-01 4.835904e-03 2.005520e-01 6.702290e-03 2.344723e-01
## X220114_s_at 1.476003e+00 7.161791e-03 1.396287e+00 2.919780e-01 1.893151e-01
## X220116_at 2.776855e-02 8.639594e-02 1.681538e-02 3.649895e-01 2.656418e-02
## X220148_at 7.050155e-03 6.488948e-02 2.297669e-01 3.625691e-01 3.488331e-05
## X220491_at 8.546573e-01 5.341100e-02 1.459564e-05 4.154566e-01 2.808793e-02
## X220496_at 1.570353e+00 4.085034e-02 1.341209e+00 8.887153e-03 9.826922e-02
## X36829_at 2.736985e+00 1.305894e+00 9.567774e-01 2.033448e+00 4.145118e-02
## Dim.96 Dim.97 Dim.98 Dim.99 Dim.100
## X200606_at 1.778390e-04 1.478685e-04 4.929469e-03 4.513528e-02 1.306758e-03
## X200734_s_at 4.684641e-02 3.951636e-02 7.631306e-04 4.961631e-03 1.768977e-02
## X200882_s_at 4.579601e-02 3.708557e-04 6.076382e-02 4.463476e-03 2.413116e-03
## X200910_at 7.948034e-02 1.222479e-04 5.013112e-03 1.378533e-01 9.712010e-02
## X200954_at 6.678390e-02 2.599911e-03 4.457835e-03 3.931461e-03 3.612289e-02
## X201128_s_at 1.424496e-02 1.409464e-02 1.352119e-01 1.712771e-02 8.013158e-06
## X201184_s_at 1.738918e-02 7.546887e-03 1.149018e-06 5.332611e-03 2.219246e-02
## X201293_x_at 4.746109e+00 1.486788e+00 7.446675e+00 5.688369e+00 5.696883e-02
## X201398_s_at 1.213005e-02 1.033830e-03 6.355478e-03 4.430045e-03 4.596931e-05
## X201441_at 1.009730e-01 2.613351e-03 2.222221e-02 1.265025e-01 1.673189e-02
## X201453_x_at 2.935575e-02 1.408742e-01 4.030353e-03 8.204028e-02 6.642000e-03
## X201516_at 4.745161e-02 8.815258e-03 6.344125e-03 7.493591e-03 3.467606e-04
## X201527_at 1.297529e-01 1.527553e-02 3.287752e-02 2.155115e-03 2.768802e-05
## X201531_at 4.978465e-03 1.913239e-02 2.007276e-01 1.621623e-01 2.020838e-02
## X201577_at 1.056384e-01 1.775243e-01 7.696391e-02 1.908140e-02 1.869295e-03
## X201584_s_at 1.214961e-01 1.226382e-03 7.076640e-04 1.136261e-01 5.138700e-02
## X201656_at 8.520131e-03 3.318085e-03 6.366263e-03 4.848931e-02 1.865597e-05
## X202541_at 8.387360e-02 7.560990e-04 1.336043e-04 3.101125e-02 1.595719e-03
## X202737_s_at 6.697851e-04 7.395669e-03 5.111716e-02 8.339707e-03 4.954110e-04
## X202861_at 2.698675e-01 1.033566e+00 4.930150e-02 1.896195e-02 1.518942e-02
## X202940_at 6.027090e-02 1.000992e-02 2.971009e-02 5.206956e-03 8.277768e-03
## X202963_at 2.373231e-01 3.854389e-03 4.432165e-07 2.531074e-04 1.575698e-02
## X203316_s_at 1.566296e+00 3.247515e-03 2.256008e-02 3.650447e-02 1.347072e-02
## X203554_x_at 1.084575e-01 3.805406e-06 1.084397e-01 2.969394e-01 2.219495e-02
## X203755_at 5.547924e-02 2.198625e-02 1.991269e-02 2.238102e-02 1.951535e-02
## X204018_x_at 8.435970e-02 4.944181e-01 4.709385e+00 1.105217e+01 4.457509e+00
## X204301_at 2.999576e-02 7.663769e-05 5.212566e-05 9.926550e-05 1.015820e-02
## X204428_s_at 8.558649e-02 6.323337e-02 3.134239e-01 3.147424e-02 1.288988e-02
## X204641_at 1.374956e-03 2.725558e-02 9.246748e-03 1.374103e-02 9.880197e-02
## X204977_at 4.511259e-02 4.069974e-02 9.622269e-04 1.585362e-03 6.478323e-04
## X205019_s_at 7.935548e-03 1.334822e-01 7.186740e-03 5.493617e-03 3.970898e-05
## X205086_s_at 5.622413e-03 6.300860e-03 2.508221e-03 6.111513e-03 2.570132e-02
## X205298_s_at 4.772763e-03 9.867396e-04 1.648733e-02 5.123488e-03 6.856568e-04
## X205306_x_at 6.174046e-02 2.836350e-02 3.772065e-02 1.059721e-04 1.737452e-06
## X205392_s_at 9.973338e-02 2.226813e-01 2.277536e-01 2.135208e-01 5.286020e-01
## X205440_s_at 4.820918e-02 4.857907e-02 1.086176e-03 7.834644e-02 3.975185e-03
## X205531_s_at 2.696968e-01 1.547222e-01 9.080441e-02 1.366024e-01 5.592854e-05
## X205554_s_at 3.190493e-01 5.711331e-02 5.723899e-02 2.210292e-01 1.454999e-01
## X205740_s_at 1.003149e-02 4.503378e-03 9.183528e-02 5.055232e-03 3.413868e-02
## X205819_at 3.222913e-02 6.722953e-05 1.296758e-02 3.551873e-02 2.740762e-02
## X205858_at 5.222641e-03 6.473774e-05 2.317862e-03 5.272070e-02 1.869643e-02
## X205866_at 2.587042e-01 9.188244e-02 4.711585e-02 5.842411e-01 1.364883e-01
## X205890_s_at 1.176923e-01 4.476182e-04 3.713874e-02 9.182330e-04 8.483464e-03
## X205911_at 1.802258e-02 5.051761e-02 2.265106e-02 1.353261e-02 2.926519e-03
## X206380_s_at 1.884009e-02 1.577156e-02 9.721943e-02 5.775844e-02 1.477033e-02
## X206453_s_at 8.028362e-05 3.547534e-02 6.649006e-03 1.413393e-02 1.296647e-03
## X206643_at 1.531693e-01 1.333054e-01 3.832621e-03 1.204045e-01 5.264301e-02
## X206680_at 1.229163e-02 1.214101e-03 2.281490e-02 2.134702e-02 6.801341e-03
## X207076_s_at 5.117378e-01 1.052499e-01 1.348986e-01 1.055913e-01 1.618602e-03
## X207218_at 8.581836e-03 9.720344e-04 8.397868e-03 1.801637e-01 6.200101e-03
## X207262_at 1.750181e-01 6.840242e-02 2.820047e-04 4.512406e-02 1.305713e-02
## X207330_at 3.779948e-03 1.096155e-02 1.020003e-02 2.271072e-03 8.401405e-03
## X207609_s_at 9.133231e-03 4.278054e-03 1.539206e-01 3.087317e-03 2.696581e-03
## X207804_s_at 5.976003e-02 1.390799e-01 3.542436e-02 7.210782e-03 1.068307e-03
## X207828_s_at 2.649979e-01 9.391812e-02 7.612203e-02 1.601636e-01 6.482175e-02
## X207995_s_at 9.851922e-02 5.624647e-02 2.366760e-01 8.660378e-02 1.956434e-02
## X208079_s_at 7.426914e-02 1.503456e-02 4.864961e-02 1.422104e-03 2.670151e-02
## X208147_s_at 1.001312e-02 7.172945e-02 4.950910e-05 1.629948e-01 1.228461e-03
## X208816_x_at 7.414026e-02 2.013802e-02 1.136963e-03 1.249482e-01 1.262569e-02
## X209189_at 4.369852e-02 8.270394e-03 3.500973e-02 6.031915e-02 2.862433e-03
## X209219_at 1.163610e-01 1.055230e-02 1.628177e-02 3.447832e-03 1.468159e-04
## X209335_at 1.999742e-01 1.674329e-02 9.482877e-03 1.540244e-02 1.675325e-01
## X209365_s_at 2.003357e-02 1.820604e-03 2.748098e-03 6.482968e-02 4.708159e-02
## X209447_at 3.366861e-03 2.034014e-01 6.516843e-03 1.157682e-03 2.541641e-02
## X209458_x_at 6.393860e-01 5.017680e-01 2.387546e-02 6.259822e-01 1.069949e+00
## X209821_at 3.995609e-03 9.509049e-02 9.361636e-04 1.330893e-04 1.814602e-02
## X209825_s_at 2.543403e-03 1.610560e-03 4.951171e-02 4.243828e-02 3.592173e-02
## X210095_s_at 9.720477e-02 3.079748e-02 2.063255e-02 1.792531e-01 2.311855e-02
## X210481_s_at 4.054439e-03 6.748897e-03 1.954068e-01 2.722603e-02 2.646672e-03
## X210909_x_at 2.303647e-02 5.010508e-04 1.230196e-02 6.092920e-04 4.938013e-02
## X211023_at 5.806759e-02 5.304477e-03 1.889144e-03 7.273370e-03 4.627197e-05
## X211378_x_at 4.841212e+00 5.158805e+01 4.578329e-01 8.292095e+00 3.012010e+00
## X211628_x_at 9.238295e-05 1.062394e-01 2.026621e-02 1.325890e-02 2.418092e-03
## X211699_x_at 7.472976e+00 5.366468e-01 9.402732e+00 1.353558e+01 2.336040e+01
## X211745_x_at 3.622859e-01 1.070578e+00 1.404972e-02 1.454420e+00 4.082800e+01
## X211765_x_at 7.156904e+00 1.830238e+00 4.792216e+00 2.121969e+00 3.229462e+00
## X211978_x_at 5.848655e+01 3.781272e-01 4.161793e+00 2.350799e-01 1.843698e-01
## X212149_at 5.733715e-02 2.385158e-02 1.949242e-02 3.914527e-02 2.496742e-03
## X212551_at 2.143580e-01 8.559452e-02 1.661102e-01 2.220317e-01 4.549072e-02
## X212554_at 5.600049e-01 3.261701e-01 7.972218e-01 1.574225e-01 2.644620e-01
## X212661_x_at 2.725443e-01 2.514474e+01 6.456208e+00 1.494462e-01 8.165601e-01
## X213068_at 2.674101e-03 6.571312e-03 1.351281e-03 3.688172e-03 1.439166e-02
## X213629_x_at 1.565565e+00 2.376752e+00 1.705733e+01 2.183629e+01 4.618792e-02
## X214414_x_at 1.403577e-01 5.627663e-05 6.136478e+00 1.203877e+00 7.629360e-02
## X214421_x_at 2.026245e-01 4.215127e-02 1.773222e+00 3.160689e-01 8.223525e-02
## X214710_s_at 3.571190e-01 1.837249e-03 1.240036e-02 8.136785e-02 6.145415e-03
## X215138_s_at 2.303916e-02 2.604144e-02 3.973649e-02 3.542689e-03 1.689678e-04
## X215330_at 1.668413e-03 8.192452e-03 2.162849e-05 1.540266e-04 1.073298e-02
## X215768_at 5.206933e-03 1.013768e-02 1.336036e-02 9.109165e-05 6.225523e-04
## X216025_x_at 3.614498e-05 1.577916e+00 7.016818e-04 1.657281e-02 4.858212e-03
## X216661_x_at 3.157956e-01 1.363309e+00 3.149872e+00 9.219898e-02 3.599018e-02
## X216782_at 2.515355e-02 2.078975e-02 6.155660e-03 2.794550e-04 2.748597e-02
## X217165_x_at 7.901349e-01 2.712385e+00 1.792222e+01 2.434896e+01 9.916298e-03
## X217319_x_at 1.035918e-01 1.548501e-02 1.104056e-02 2.363009e-02 3.442075e-03
## X217414_x_at 3.591993e+00 3.032502e+00 1.145623e+01 3.108490e+00 1.959285e+01
## X217521_at 6.392099e-01 1.345659e-01 3.399045e-02 7.681535e-02 1.026290e-01
## X218002_s_at 1.773242e-01 3.591943e-04 1.216219e-01 4.608812e-02 4.933291e-03
## X218061_at 1.168699e-05 8.310616e-03 9.789928e-03 2.307074e-02 2.990823e-02
## X219485_s_at 1.738657e-01 2.025830e-02 1.000270e-03 7.615544e-04 3.195210e-03
## X219787_s_at 1.692035e-02 1.640434e-03 4.701277e-02 7.484928e-02 5.175385e-02
## X220017_x_at 9.450253e-04 2.443810e-03 8.911283e-02 6.179025e-01 3.238749e-01
## X220114_s_at 6.535869e-02 1.551370e-01 8.453817e-03 3.987259e-03 8.085718e-02
## X220116_at 3.015909e-04 1.013631e-02 1.554155e-02 1.331038e-01 3.647122e-02
## X220148_at 1.469801e-03 1.703918e-02 4.458597e-01 2.257951e-01 1.258520e-06
## X220491_at 3.987216e-02 2.288449e-04 2.448910e-02 3.054298e-02 1.537143e-02
## X220496_at 6.541668e-02 8.247833e-03 2.936418e-04 1.890899e-02 1.001732e-02
## X36829_at 1.195720e-01 1.275674e+00 1.404505e-01 2.107366e-02 6.793911e-02
## Dim.101 Dim.102 Dim.103 Dim.104 Dim.105
## X200606_at 1.051680e-02 3.698400e-07 8.300290e-03 7.942213e-04 1.998971e-02
## X200734_s_at 7.699063e-03 5.487944e-02 9.040454e-04 2.428851e-03 5.199786e-03
## X200882_s_at 6.559361e-02 4.134324e-03 4.607287e-02 7.597570e-03 5.207974e-02
## X200910_at 2.212024e-02 2.494411e-02 2.753425e-01 4.307234e-02 1.527362e-02
## X200954_at 6.887434e-03 3.382082e-02 3.617830e-02 5.708733e-05 1.476578e-03
## X201128_s_at 9.164077e-04 1.168162e-02 7.881907e-03 1.941810e-02 1.281157e-03
## X201184_s_at 2.510334e-04 2.771389e-03 4.792706e-03 5.889919e-03 2.800581e-03
## X201293_x_at 1.235398e+01 7.343780e-01 4.597225e+00 7.095020e+00 3.237499e+01
## X201398_s_at 2.784633e-03 1.487157e-03 5.313584e-02 2.590085e-02 1.221224e-03
## X201441_at 4.481863e-02 1.927189e-02 7.225316e-04 1.261406e-02 7.243063e-04
## X201453_x_at 3.619996e-05 1.204508e-03 5.655171e-04 1.658604e-02 1.715665e-02
## X201516_at 1.010473e-04 3.593579e-03 3.277619e-03 8.316418e-05 1.211566e-02
## X201527_at 1.657085e-02 8.387755e-03 4.422502e-05 5.304437e-03 3.245736e-02
## X201531_at 1.149772e-02 4.326235e-02 1.118352e-02 1.897141e-02 2.004706e-02
## X201577_at 2.659128e-02 1.358467e-02 1.012377e-02 1.246164e-02 2.751665e-02
## X201584_s_at 4.878224e-02 1.233955e-01 8.518063e-02 2.918152e-02 7.507088e-03
## X201656_at 1.760380e-02 1.227808e-02 1.045004e-02 2.421384e-02 1.330447e-02
## X202541_at 3.149750e-03 1.095717e-02 4.279663e-05 1.876951e-02 2.608659e-04
## X202737_s_at 4.395364e-07 9.663724e-02 6.021449e-02 5.604580e-02 5.136507e-03
## X202861_at 6.249786e-03 1.647587e-02 3.716916e-02 4.647014e-02 2.091418e-01
## X202940_at 7.084281e-05 2.517911e-04 7.284578e-03 2.835938e-03 5.669728e-03
## X202963_at 1.504252e-02 8.969582e-04 1.740168e-02 3.783656e-03 5.941925e-03
## X203316_s_at 2.050816e-01 8.157244e-02 1.553840e-01 6.246741e-02 7.493841e-03
## X203554_x_at 5.294883e-02 1.909432e-02 2.640221e-02 6.683465e-03 1.655068e-02
## X203755_at 3.109132e-02 1.480615e-02 2.976753e-02 2.803488e-03 1.359903e-03
## X204018_x_at 1.625116e+00 2.474305e+01 1.502263e+01 8.439044e+00 7.174123e-01
## X204301_at 1.048687e-02 1.265056e-02 3.451752e-04 2.938467e-03 5.583236e-04
## X204428_s_at 6.218921e-03 4.130523e-02 2.450741e-03 4.466357e-02 2.557207e-02
## X204641_at 2.569919e-02 2.656192e-02 4.053988e-02 2.717122e-02 2.913384e-02
## X204977_at 1.062511e-03 1.594539e-02 7.226324e-03 2.936452e-02 1.079690e-05
## X205019_s_at 1.417275e-01 1.324801e-03 6.944029e-03 2.237145e-04 1.319473e-01
## X205086_s_at 3.901382e-03 3.065879e-02 5.708042e-04 5.502093e-05 2.789449e-03
## X205298_s_at 5.235077e-03 7.834241e-03 9.556515e-03 4.309586e-02 1.183248e-03
## X205306_x_at 2.283039e-02 9.183290e-03 1.075988e-02 9.562775e-04 3.043658e-03
## X205392_s_at 1.226339e-01 6.321254e-03 1.388314e-03 3.043064e-02 2.698083e-02
## X205440_s_at 2.374021e-03 4.761226e-03 5.700776e-02 1.343611e-02 2.939873e-02
## X205531_s_at 8.075438e-02 1.427252e-02 4.030292e-06 2.162585e-02 1.050988e-01
## X205554_s_at 7.690196e-02 2.244191e-01 9.495981e-02 1.528425e-01 8.543606e-05
## X205740_s_at 3.510755e-03 2.582332e-03 1.124048e-02 6.409826e-05 1.696545e-02
## X205819_at 7.506824e-05 4.828221e-03 1.736281e-02 1.894172e-02 1.190352e-03
## X205858_at 3.534405e-03 2.109759e-03 6.586837e-04 3.900912e-03 8.155880e-03
## X205866_at 4.830241e-03 3.364697e-02 4.397568e-01 2.822777e-01 6.159259e-03
## X205890_s_at 4.372631e-05 3.032155e-03 1.895604e-04 2.222814e-02 6.648856e-03
## X205911_at 1.906839e-02 3.084675e-02 1.987541e-03 4.002219e-03 2.537142e-02
## X206380_s_at 2.282744e-06 5.160919e-03 1.713610e-04 4.192294e-02 8.452269e-03
## X206453_s_at 1.350425e-02 4.659071e-02 3.795974e-03 3.791240e-02 3.806483e-02
## X206643_at 2.059502e-01 1.360324e-02 3.767164e-01 4.209604e-01 2.665497e-03
## X206680_at 2.341373e-02 6.801815e-02 5.600010e-05 6.270020e-03 9.436994e-02
## X207076_s_at 4.589357e-02 2.936541e-02 3.374982e-02 6.415207e-04 4.065355e-04
## X207218_at 3.594848e-03 7.841745e-03 3.471850e-02 5.836593e-02 2.078212e-02
## X207262_at 1.448724e-02 5.767266e-02 1.004371e-01 5.206820e-03 1.328741e-03
## X207330_at 3.315703e-03 1.115621e-03 4.041946e-03 3.544299e-03 1.257960e-03
## X207609_s_at 1.379215e-01 2.598374e-05 3.000577e-02 1.940386e-02 1.813619e-02
## X207804_s_at 9.211780e-03 1.534993e-03 2.845212e-03 4.991816e-03 2.387986e-03
## X207828_s_at 1.369914e-01 3.231207e-02 9.031834e-02 3.182493e-03 1.270942e-01
## X207995_s_at 6.065420e-02 6.939942e-03 2.274666e-03 7.265504e-02 5.941434e-02
## X208079_s_at 4.027269e-03 9.651754e-03 1.517316e-03 2.206812e-02 1.861085e-02
## X208147_s_at 3.682942e-02 1.029850e-01 2.906266e-02 2.402534e-04 6.192386e-04
## X208816_x_at 3.687081e-03 1.413212e-02 1.271028e-02 5.669373e-03 1.296999e-02
## X209189_at 1.528391e-02 1.332594e-02 5.874356e-04 1.606571e-04 1.685051e-03
## X209219_at 6.135548e-02 7.427522e-02 7.719828e-03 6.570691e-04 1.900127e-02
## X209335_at 2.483436e-02 3.275602e-02 5.977660e-02 5.583203e-03 1.804462e-05
## X209365_s_at 4.276144e-02 4.312845e-02 2.531914e-03 7.671797e-02 1.057393e-01
## X209447_at 4.541237e-02 2.855620e-02 7.163895e-04 2.950590e-02 3.468816e-06
## X209458_x_at 3.506160e-01 1.659208e+01 1.820109e+01 2.310879e+01 1.994720e+00
## X209821_at 2.374730e-02 1.919065e-03 1.800111e-03 8.769745e-04 3.234110e-03
## X209825_s_at 5.656770e-02 5.052149e-03 1.923521e-03 6.651185e-03 1.934780e-03
## X210095_s_at 1.892481e-03 5.104958e-04 3.992273e-02 9.861972e-03 2.053384e-02
## X210481_s_at 1.095852e-03 1.786127e-02 2.912069e-02 2.628154e-02 1.850006e-03
## X210909_x_at 1.753130e-02 2.858137e-04 4.894552e-03 1.111708e-04 8.092877e-03
## X211023_at 4.541032e-04 4.096494e-03 1.937987e-02 9.750637e-03 5.074241e-03
## X211378_x_at 4.697814e+00 3.933763e-03 1.182245e+00 9.587948e-01 7.341196e-02
## X211628_x_at 7.232761e-03 1.348755e-02 1.513000e-02 6.196749e-03 2.963930e-04
## X211699_x_at 2.288414e+00 1.955214e+00 2.479245e+00 1.970108e+00 7.664424e-01
## X211745_x_at 2.174216e+00 2.032165e+00 2.420493e-04 2.533877e+01 7.064204e+00
## X211765_x_at 6.001651e+00 1.360494e+00 3.374617e+00 4.882201e+00 4.017093e+01
## X211978_x_at 5.517964e+00 5.385682e-01 1.746210e-01 2.717261e-01 3.358314e-01
## X212149_at 3.227881e-04 1.147498e-02 1.180528e-02 6.186033e-03 1.594905e-04
## X212551_at 1.210267e-02 1.565574e-02 5.286021e-03 1.165471e-03 9.059704e-03
## X212554_at 1.050328e-02 7.393727e-02 2.093506e-02 3.672604e-03 2.186163e-03
## X212661_x_at 4.114842e+01 3.745107e-01 7.105028e-01 2.085999e-04 9.022786e-01
## X213068_at 1.557867e-02 4.460756e-04 1.087970e-02 8.731811e-04 5.242377e-04
## X213629_x_at 1.643457e-02 1.536197e+00 1.695160e-01 1.456441e+00 1.162536e-01
## X214414_x_at 3.233341e+00 1.187568e-01 1.042354e+00 5.306092e+00 9.547414e-01
## X214421_x_at 1.151378e+00 2.157071e+00 3.318778e+00 6.378173e-01 1.433337e+00
## X214710_s_at 1.339621e-03 1.492046e-01 6.834279e-06 4.583144e-03 1.512253e-03
## X215138_s_at 5.485041e-03 8.214279e-05 1.893774e-03 1.804057e-04 7.339231e-03
## X215330_at 2.323253e-03 1.226350e-02 4.947796e-03 1.291813e-04 3.127113e-04
## X215768_at 2.784963e-03 2.006714e-03 8.431302e-03 1.387740e-03 4.077697e-03
## X216025_x_at 3.427019e-03 2.068337e-01 6.112707e+00 3.473761e+00 6.803050e-01
## X216661_x_at 5.463849e-04 2.609869e+01 3.411130e+01 1.924956e-01 7.654324e+00
## X216782_at 1.046975e-02 1.163985e-03 8.398235e-03 3.308481e-03 6.598107e-03
## X217165_x_at 3.915155e-02 1.569988e+00 1.472858e-01 1.044711e+00 6.408990e-02
## X217319_x_at 4.553219e-02 4.791470e-04 8.116552e-02 9.111690e-03 1.967084e-02
## X217414_x_at 1.560766e+01 1.742513e+00 4.596023e+00 1.257112e+01 2.516715e+00
## X217521_at 1.596525e-01 3.503948e-02 2.724147e-01 3.636371e-01 1.466510e-02
## X218002_s_at 7.655736e-02 1.075022e-02 1.178507e-02 1.393468e-02 5.083616e-03
## X218061_at 4.940811e-03 8.418347e-03 1.896701e-02 2.087750e-05 9.238718e-05
## X219485_s_at 2.475239e-02 7.015417e-03 2.089348e-03 8.781842e-03 7.993220e-03
## X219787_s_at 2.635906e-02 9.900998e-03 2.856852e-02 1.049895e-04 1.032024e-01
## X220017_x_at 1.036363e+00 1.613650e+01 1.589886e+00 7.071912e-01 2.358027e-01
## X220114_s_at 6.132276e-02 6.324375e-03 1.167424e-02 1.740272e-02 8.479229e-05
## X220116_at 2.142266e-04 1.079810e-03 2.027051e-04 2.136659e-03 8.751335e-03
## X220148_at 5.997735e-03 1.525675e-03 8.784058e-02 3.059974e-03 2.339077e-02
## X220491_at 1.379192e-05 1.160141e-02 4.982333e-04 1.644177e-04 1.537136e-02
## X220496_at 1.616548e-01 1.626768e-02 9.510739e-03 2.023169e-03 1.286135e-01
## X36829_at 6.479467e-04 2.055038e-02 7.573934e-02 1.058104e-01 1.094951e-01
## Dim.106 Dim.107
## X200606_at 1.007270e-05 2.277058e-03
## X200734_s_at 7.998460e-05 7.230374e-03
## X200882_s_at 6.415989e-03 1.242420e-04
## X200910_at 3.943601e-02 2.133698e-02
## X200954_at 2.514419e-03 9.726226e-04
## X201128_s_at 4.584798e-04 9.278477e-03
## X201184_s_at 1.768160e-03 1.132996e-03
## X201293_x_at 2.744645e-01 2.006768e-02
## X201398_s_at 6.000181e-03 3.991633e-03
## X201441_at 2.549046e-02 1.450556e-03
## X201453_x_at 4.261488e-03 2.959150e-02
## X201516_at 1.024499e-02 2.180072e-02
## X201527_at 2.752537e-02 4.146682e-02
## X201531_at 3.204268e-03 1.892508e-02
## X201577_at 1.832083e-02 4.119930e-02
## X201584_s_at 3.525171e-03 7.426690e-04
## X201656_at 7.705048e-03 8.102071e-03
## X202541_at 4.279715e-05 7.090855e-05
## X202737_s_at 5.005028e-03 6.613787e-04
## X202861_at 5.816746e-02 1.408691e-02
## X202940_at 3.380570e-03 1.061011e-05
## X202963_at 2.364614e-03 4.068412e-02
## X203316_s_at 8.865875e-02 8.776236e-06
## X203554_x_at 9.796183e-02 5.140417e-02
## X203755_at 4.542849e-04 1.796005e-02
## X204018_x_at 4.104643e+00 3.215266e-01
## X204301_at 1.071925e-05 2.278980e-05
## X204428_s_at 1.352052e-02 7.003349e-03
## X204641_at 1.106103e-04 8.823142e-04
## X204977_at 2.413261e-03 2.358212e-02
## X205019_s_at 1.749677e-02 3.984098e-02
## X205086_s_at 1.448811e-05 1.235571e-03
## X205298_s_at 2.009537e-07 1.683812e-03
## X205306_x_at 4.005773e-04 1.196537e-05
## X205392_s_at 3.811791e-03 2.089588e-04
## X205440_s_at 3.803257e-03 8.438622e-04
## X205531_s_at 2.809330e-02 2.637495e-04
## X205554_s_at 2.982240e-03 2.732646e-02
## X205740_s_at 1.908772e-03 5.210384e-04
## X205819_at 2.743135e-02 1.460369e-02
## X205858_at 6.882598e-03 7.600667e-03
## X205866_at 9.714490e-02 1.867443e-02
## X205890_s_at 2.023283e-03 1.036553e-02
## X205911_at 2.156703e-03 8.956997e-03
## X206380_s_at 2.291277e-03 1.777573e-03
## X206453_s_at 1.763202e-06 4.751533e-03
## X206643_at 2.214496e-02 2.866159e-03
## X206680_at 1.372348e-02 2.482038e-03
## X207076_s_at 1.903064e-03 5.022901e-03
## X207218_at 9.741566e-03 1.878420e-03
## X207262_at 4.057216e-02 1.930282e-03
## X207330_at 5.514038e-05 8.480976e-04
## X207609_s_at 7.495102e-03 2.030466e-03
## X207804_s_at 2.328381e-03 1.619721e-02
## X207828_s_at 4.809818e-02 2.218762e-03
## X207995_s_at 1.559065e-02 5.186271e-03
## X208079_s_at 7.730502e-03 1.621393e-03
## X208147_s_at 5.975185e-06 7.855569e-03
## X208816_x_at 2.339051e-03 2.061942e-02
## X209189_at 3.455159e-02 6.524169e-03
## X209219_at 2.000133e-03 1.631394e-04
## X209335_at 2.984488e-03 2.495821e-02
## X209365_s_at 1.205039e-01 1.460094e-02
## X209447_at 1.318262e-04 3.786895e-02
## X209458_x_at 7.436717e+00 1.794097e+00
## X209821_at 7.045897e-03 1.141139e-02
## X209825_s_at 4.861787e-05 3.520933e-04
## X210095_s_at 1.575028e-02 3.934692e-04
## X210481_s_at 1.311863e-03 9.402611e-04
## X210909_x_at 3.129252e-02 3.979909e-03
## X211023_at 3.341548e-05 9.132577e-03
## X211378_x_at 9.795046e-02 3.079165e-01
## X211628_x_at 1.761950e-05 6.661523e-03
## X211699_x_at 3.408557e-02 1.624523e+00
## X211745_x_at 8.972585e-02 5.794373e-01
## X211765_x_at 1.637781e+00 2.547566e-02
## X211978_x_at 5.578148e-03 2.810286e-01
## X212149_at 1.176261e-02 9.741959e-05
## X212551_at 1.825575e-03 1.636722e-01
## X212554_at 2.654481e-02 1.556979e-01
## X212661_x_at 9.813576e-02 1.125452e+00
## X213068_at 8.814830e-05 5.346552e-03
## X213629_x_at 4.386294e-02 1.685498e-01
## X214414_x_at 5.433040e-03 9.986693e-04
## X214421_x_at 5.861339e+00 5.726090e+01
## X214710_s_at 9.397534e-04 1.124234e-03
## X215138_s_at 6.982116e-04 4.435446e-04
## X215330_at 3.348147e-03 3.852094e-03
## X215768_at 8.169777e-03 4.311602e-04
## X216025_x_at 2.999364e+01 3.045060e+01
## X216661_x_at 1.040041e+00 8.182330e-02
## X216782_at 4.464708e-03 3.169376e-05
## X217165_x_at 3.087063e-02 2.054937e-01
## X217319_x_at 6.665051e-04 1.213544e-02
## X217414_x_at 2.730231e-01 9.691904e-03
## X217521_at 8.344952e-03 3.493377e-02
## X218002_s_at 3.713776e-02 2.547876e-03
## X218061_at 2.316246e-04 5.480094e-05
## X219485_s_at 9.062799e-03 1.157718e-03
## X219787_s_at 1.641358e-04 1.260649e-02
## X220017_x_at 4.769317e+01 4.628245e+00
## X220114_s_at 1.892167e-02 3.572575e-03
## X220116_at 2.098641e-04 9.127560e-04
## X220148_at 4.466021e-03 6.327987e-03
## X220491_at 9.322031e-04 1.224451e-03
## X220496_at 2.676846e-02 1.428463e-02
## X36829_at 1.018896e-01 1.313638e-03It is important to note that not scaling the data will lead to different results. Yet the separation is not shown to be majorly affcted by non-scaling in this case, which might be related to the observation of before where running boruta on normalized and non-normalized versions of the data did not result in much discrepancy of the results. So it might be the case that most of the genes in this dataset have similar scales, so that they are not affected much by normalization.
pca <- prcomp(new_df[-1], scale = F, center = T)autoplot(pca,data=new_df,colour='type')
(3.2) K-Means Clustering
km.out <- kmeans(new_df[-1], centers = 2, nstart = 20)
summary(km.out)## Length Class Mode
## cluster 357 -none- numeric
## centers 214 -none- numeric
## totss 1 -none- numeric
## withinss 2 -none- numeric
## tot.withinss 1 -none- numeric
## betweenss 1 -none- numeric
## size 2 -none- numeric
## iter 1 -none- numeric
## ifault 1 -none- numerickm.out$cluster## [1] 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [38] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1
## [75] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [112] 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [149] 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2
## [186] 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [223] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [260] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [297] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [334] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2km.out## K-means clustering with 2 clusters of sizes 175, 182
##
## Cluster means:
## X200606_at X200734_s_at X200882_s_at X200910_at X200954_at X201128_s_at
## 1 9.656582 7.931833 9.369561 9.576500 7.658247 8.658664
## 2 9.104031 7.709853 8.173039 7.934141 7.595763 7.020753
## X201184_s_at X201293_x_at X201398_s_at X201441_at X201453_x_at X201516_at
## 1 6.681940 12.19450 10.68998 10.71797 9.826222 6.839453
## 2 6.310851 11.39602 10.02504 10.16740 8.876772 5.868456
## X201527_at X201531_at X201577_at X201584_s_at X201656_at X202541_at
## 1 8.238098 8.092141 8.935581 7.854118 6.421280 6.114855
## 2 7.535145 9.606693 7.416106 6.451483 4.977478 5.390882
## X202737_s_at X202861_at X202940_at X202963_at X203316_s_at X203554_x_at
## 1 7.887552 5.766335 4.118533 7.153547 10.259974 7.820646
## 2 6.707034 7.676608 4.157695 5.589545 8.654247 5.183178
## X203755_at X204018_x_at X204301_at X204428_s_at X204641_at X204977_at
## 1 5.449834 7.102402 3.767790 5.193145 5.404019 6.218062
## 2 3.666807 9.339005 4.651651 8.318586 3.545156 5.416067
## X205019_s_at X205086_s_at X205298_s_at X205306_x_at X205392_s_at X205440_s_at
## 1 4.116993 4.654689 4.753747 6.051214 6.969328 3.492414
## 2 7.053373 4.147151 4.369967 8.392372 8.896168 4.747964
## X205531_s_at X205554_s_at X205740_s_at X205819_at X205858_at X205866_at
## 1 5.652421 5.244675 7.150383 3.794225 3.513736 5.657376
## 2 9.134623 8.304101 6.434100 5.818718 4.309432 9.129089
## X205890_s_at X205911_at X206380_s_at X206453_s_at X206643_at X206680_at
## 1 10.571875 3.694854 4.108615 7.817413 8.763683 4.893561
## 2 8.214778 5.389414 5.568072 9.557718 10.200566 7.451276
## X207076_s_at X207218_at X207262_at X207330_at X207609_s_at X207804_s_at
## 1 10.64951 9.412856 5.430545 4.614387 4.193048 3.482503
## 2 12.66239 12.044901 9.035074 6.444131 8.686849 6.136218
## X207828_s_at X207995_s_at X208079_s_at X208147_s_at X208816_x_at X209189_at
## 1 6.597018 3.686348 7.051012 8.750586 8.328780 5.772062
## 2 4.086624 5.657431 4.644944 12.053531 6.910083 9.580897
## X209219_at X209335_at X209365_s_at X209447_at X209458_x_at X209821_at
## 1 8.085025 5.52894 5.112728 5.755716 7.023735 3.716031
## 2 6.679459 8.22492 7.531699 7.348128 9.305532 4.307652
## X209825_s_at X210095_s_at X210481_s_at X210909_x_at X211023_at X211378_x_at
## 1 5.497490 9.039363 3.526484 3.957423 9.292551 12.06746
## 2 3.982213 11.135056 5.604747 5.087007 9.111501 11.28063
## X211628_x_at X211699_x_at X211745_x_at X211765_x_at X211978_x_at X212149_at
## 1 10.74379 6.696118 7.380664 12.14474 12.04361 9.544981
## 2 10.25339 8.851242 9.617168 11.33989 11.28412 9.056542
## X212551_at X212554_at X212661_x_at X213068_at X213629_x_at X214414_x_at
## 1 6.196214 7.166607 12.16720 3.828700 7.261015 8.332903
## 2 4.146215 4.638862 11.39072 5.195032 11.390181 10.494537
## X214421_x_at X214710_s_at X215138_s_at X215330_at X215768_at X216025_x_at
## 1 8.939024 6.222980 3.531507 3.809045 4.082251 9.31850
## 2 11.940089 3.643387 3.706174 4.825357 5.063196 12.19016
## X216661_x_at X216782_at X217165_x_at X217319_x_at X217414_x_at X217521_at
## 1 8.330158 3.519496 7.54354 6.714137 7.350998 7.459878
## 2 11.163741 3.832321 11.24125 9.791891 9.510442 9.303987
## X218002_s_at X218061_at X219485_s_at X219787_s_at X220017_x_at X220114_s_at
## 1 3.288103 9.103846 7.403011 5.411515 9.489538 3.833141
## 2 6.808157 8.279440 5.956467 3.320152 12.260283 5.747415
## X220116_at X220148_at X220491_at X220496_at X36829_at
## 1 3.488641 8.392014 6.28461 3.973816 5.718525
## 2 6.189734 10.708430 11.82876 6.313190 7.070363
##
## Clustering vector:
## [1] 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [38] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1
## [75] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [112] 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [149] 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2
## [186] 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [223] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [260] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [297] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [334] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2
##
## Within cluster sum of squares by cluster:
## [1] 20292.471 8698.145
## (between_SS / total_SS = 59.0 %)
##
## Available components:
##
## [1] "cluster" "centers" "totss" "withinss" "tot.withinss"
## [6] "betweenss" "size" "iter" "ifault"probs <- km.out$cluste
pred <- rep("HCC",nrow(new_df))
pred[probs == probs[length(probs)]] <- "normal"
t = confusionMatrix(as.factor(pred), reference=as.factor(new_df$type))
t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 172 3
## normal 9 173
##
## Accuracy : 0.9664
## 95% CI : (0.942, 0.9825)
## No Information Rate : 0.507
## P-Value [Acc > NIR] : <2e-16
##
## Kappa : 0.9328
##
## Mcnemar's Test P-Value : 0.1489
##
## Sensitivity : 0.9503
## Specificity : 0.9830
## Pos Pred Value : 0.9829
## Neg Pred Value : 0.9505
## Prevalence : 0.5070
## Detection Rate : 0.4818
## Detection Prevalence : 0.4902
## Balanced Accuracy : 0.9666
##
## 'Positive' Class : HCC
## Creating 2 clusters using the new_df dataset is shown to result in 2 clusters with 96% similarity with the actual 2 groups HCC and normal.
The following plots show the pairs plots for some of the genes colored by cluster and by category (HCC, normal). The patterns are very similar, reflecting that the clusters are intimately related to the 2 original categories.
new_df$type=factor(new_df$type,labels=c(2,1))
plot(new_df[-1][1:10], col = km.out$cluster)
plot(new_df[-1][1:10], col = new_df$type)
The following plot displays the error change for differents choices of
clusters.
wss <- 0
# For 1 to 15 cluster centers
for (i in 1:15) {
km.out <- kmeans(new_df[-1], centers = i, nstart = 20)
# Save total within sum of squares to wss variable
wss[i] <- km.out$tot.withinss
}
# Plot total within sum of squares vs. number of clusters
plot(1:15, wss, type = "b",
xlab = "Number of Clusters",
ylab = "Within groups sum of squares")
Using 3 clusters instead is shown to result in the additional cluster
being mostly a sub part of the cluster corresponding for HCC cases,
which will slightly increase the accuracy by reducing the classification
of HCC cases as normal.
km.out <- kmeans(new_df[-1], centers = 3, nstart = 20)
km.out$cluster## [1] 1 1 1 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1 3 3 1 3 3 3 1 3 1 1 3 3 3 3
## [38] 3 3 3 3 3 1 1 3 1 3 3 3 3 3 1 3 1 3 1 3 3 3 1 3 2 1 3 2 3 1 3 3 3 3 1 1 3
## [75] 3 3 3 1 1 3 3 1 3 3 3 1 3 3 3 2 3 3 1 2 3 3 3 1 3 3 3 3 3 3 1 3 3 1 1 1 3
## [112] 3 3 3 3 1 3 2 3 1 3 3 3 3 3 3 1 3 3 2 3 3 3 3 3 1 3 3 3 3 3 3 3 3 3 3 3 1
## [149] 1 3 3 2 1 3 3 3 3 3 1 1 1 3 3 3 3 3 3 3 3 3 3 1 3 1 3 3 3 3 1 3 1 2 2 2 2
## [186] 2 2 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [223] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [260] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [297] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [334] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2plot(new_df[-1][1:10], col = km.out$cluster)
probs <- km.out$cluster
pred <- rep("HCC",nrow(new_df))
pred[probs == probs[length(probs)]] <- "normal"
pred## [1] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "normal"
## [9] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [17] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [25] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [33] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [41] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [49] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [57] "HCC" "HCC" "HCC" "HCC" "HCC" "normal" "HCC" "HCC"
## [65] "normal" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [73] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [81] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [89] "HCC" "normal" "HCC" "HCC" "HCC" "normal" "HCC" "HCC"
## [97] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [105] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [113] "HCC" "HCC" "HCC" "HCC" "HCC" "normal" "HCC" "HCC"
## [121] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [129] "HCC" "normal" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [137] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [145] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "normal"
## [153] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [161] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [169] "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC" "HCC"
## [177] "HCC" "HCC" "HCC" "HCC" "HCC" "normal" "normal" "normal"
## [185] "normal" "normal" "normal" "normal" "HCC" "normal" "normal" "normal"
## [193] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [201] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [209] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [217] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [225] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [233] "normal" "normal" "normal" "normal" "normal" "HCC" "normal" "normal"
## [241] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [249] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [257] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [265] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [273] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [281] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [289] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [297] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [305] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [313] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [321] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [329] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [337] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [345] "normal" "normal" "normal" "normal" "normal" "normal" "normal" "normal"
## [353] "normal" "normal" "HCC" "normal" "normal"t = confusionMatrix(as.factor(pred), reference=factor(new_df$type,labels=c('HCC','normal')))
t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 173 3
## normal 8 173
##
## Accuracy : 0.9692
## 95% CI : (0.9455, 0.9845)
## No Information Rate : 0.507
## P-Value [Acc > NIR] : <2e-16
##
## Kappa : 0.9384
##
## Mcnemar's Test P-Value : 0.2278
##
## Sensitivity : 0.9558
## Specificity : 0.9830
## Pos Pred Value : 0.9830
## Neg Pred Value : 0.9558
## Prevalence : 0.5070
## Detection Rate : 0.4846
## Detection Prevalence : 0.4930
## Balanced Accuracy : 0.9694
##
## 'Positive' Class : HCC
## (3.3) Hierarchical Clustering
hclust.out <- hclust(dist(new_df[-1]))
summary(hclust.out)## Length Class Mode
## merge 712 -none- numeric
## height 356 -none- numeric
## order 357 -none- numeric
## labels 0 -none- NULL
## method 1 -none- character
## call 2 -none- call
## dist.method 1 -none- characterplot(hclust.out)
abline(h = 30, col = "red")
# Cut by height
c=cutree(hclust.out, h = 30)
c## [1] 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [38] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1
## [75] 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [112] 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## [149] 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 2 2 2 2
## [186] 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [223] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [260] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [297] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [334] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2Using the hierarchical clustering approach is shown to result in 2 clusters that are highly correlated with the HCC and normal categories, yet less correlated than the clusters produced using k-means clustering.
new_df$type = factor(new_df$type,labels=('HCC','normal'))
pred <- rep("HCC",nrow(new_df))
pred[c == c[length(c)]] <- "normal"
t = confusionMatrix(as.factor(pred), reference=as.factor(new_df$type))
t## Error: <text>:1:47: unexpected ','
## 1: new_df$type = factor(new_df$type,labels=('HCC',
## ^It is more challenging to get 3 clusters cutting the tree by height, so it will be cut using the k parameter to this end.
# Cut by number of clusters
c=cutree(hclust.out, k = 3)
c## [1] 1 1 1 1 1 1 1 2 1 1 1 1 3 1 1 1 1 1 1 1 3 1 3 1 3 1 1 3 1 3 1 1 3 1 1 1 1
## [38] 1 1 3 1 1 3 1 1 3 3 1 1 1 1 3 1 3 1 3 1 1 1 3 1 2 3 1 2 1 3 1 1 1 1 3 3 3
## [75] 1 3 1 3 3 1 1 3 3 1 1 1 1 3 1 2 1 1 3 2 1 3 3 3 1 1 3 1 3 1 3 1 1 3 3 3 1
## [112] 1 1 1 3 3 1 2 1 3 3 1 1 1 1 3 3 1 1 2 1 1 1 1 3 1 1 1 1 1 3 1 1 1 1 3 1 3
## [149] 3 3 1 2 1 3 3 1 1 1 3 3 3 3 3 1 1 1 1 1 1 3 1 3 3 3 1 2 1 1 1 1 3 2 2 2 2
## [186] 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [223] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [260] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [297] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
## [334] 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2It can be noticed that as for k-means taking creating 3 clusters will result in the creation of 1 cluster for normal cases with the 2 other clusters representing the HCC cases. The similarities remain the same using 3 clusters.
pred <- rep("HCC",nrow(new_df))
pred[c == c[length(c)]] <- "normal"
t = confusionMatrix(as.factor(pred), reference=as.factor(new_df$type))## Error in confusionMatrix.default(as.factor(pred), reference = as.factor(new_df$type)): The data must contain some levels that overlap the reference.t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 173 3
## normal 8 173
##
## Accuracy : 0.9692
## 95% CI : (0.9455, 0.9845)
## No Information Rate : 0.507
## P-Value [Acc > NIR] : <2e-16
##
## Kappa : 0.9384
##
## Mcnemar's Test P-Value : 0.2278
##
## Sensitivity : 0.9558
## Specificity : 0.9830
## Pos Pred Value : 0.9830
## Neg Pred Value : 0.9558
## Prevalence : 0.5070
## Detection Rate : 0.4846
## Detection Prevalence : 0.4930
## Balanced Accuracy : 0.9694
##
## 'Positive' Class : HCC
## However unlike k-means clustering where increasing the number of clusters above 3 will result in less correlated patterns with the 2 original categories, it was noticed here that increasing the number of clusters up to 7 and more will result in 6 clusters representative for the HCC cases, with 1 cluster representative of the normal cases, allowing for a better separation of the clusters into HCC and normal cases.
c=cutree(hclust.out, k = 7)
c## [1] 1 1 1 2 1 2 2 3 2 2 1 2 4 2 1 1 2 1 2 2 4 2 4 2 4 1 2 4 2 4 1 1 5 1 2 2 1
## [38] 1 2 4 2 2 5 1 2 5 4 2 2 1 1 5 1 4 2 6 1 2 1 5 2 3 4 1 7 1 4 1 2 2 1 4 5 4
## [75] 1 4 1 5 5 2 1 5 4 1 1 1 1 4 2 3 2 1 5 7 2 4 4 4 2 2 4 1 4 1 4 1 1 5 6 6 2
## [112] 2 1 2 4 4 1 3 2 5 4 2 2 2 1 4 5 2 2 7 1 2 2 2 4 1 1 1 2 2 6 1 1 1 2 4 1 5
## [149] 5 4 2 7 1 4 4 1 2 1 5 4 6 4 4 1 2 2 2 1 2 4 1 5 4 6 2 3 2 1 1 1 5 7 7 7 7
## [186] 7 7 7 2 7 7 7 3 7 3 7 7 7 7 7 3 7 7 3 3 7 7 7 7 7 7 7 3 3 7 3 7 3 7 7 7 7
## [223] 7 7 7 7 3 7 7 3 7 3 7 7 3 3 7 4 7 7 7 7 7 7 7 7 7 7 7 3 7 7 7 7 7 7 7 7 7
## [260] 3 3 7 7 7 7 7 7 3 3 7 7 7 7 7 7 7 7 3 3 3 7 3 7 3 7 7 7 7 7 7 3 3 7 3 7 7
## [297] 3 7 3 3 7 7 7 7 7 7 7 7 7 7 7 7 3 7 7 7 7 7 7 3 7 7 7 7 7 3 7 7 3 7 7 7 7
## [334] 7 7 7 3 7 7 7 7 7 7 7 7 3 7 3 7 7 7 7 7 3 2 7 7pred <- rep("HCC",nrow(new_df))
pred[c == c[length(c)]] <- "normal"
t = confusionMatrix(as.factor(pred), reference=as.factor(new_df$type))## Error in confusionMatrix.default(as.factor(pred), reference = as.factor(new_df$type)): The data must contain some levels that overlap the reference.t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 173 3
## normal 8 173
##
## Accuracy : 0.9692
## 95% CI : (0.9455, 0.9845)
## No Information Rate : 0.507
## P-Value [Acc > NIR] : <2e-16
##
## Kappa : 0.9384
##
## Mcnemar's Test P-Value : 0.2278
##
## Sensitivity : 0.9558
## Specificity : 0.9830
## Pos Pred Value : 0.9830
## Neg Pred Value : 0.9558
## Prevalence : 0.5070
## Detection Rate : 0.4846
## Detection Prevalence : 0.4930
## Balanced Accuracy : 0.9694
##
## 'Positive' Class : HCC
## There are 4 methods to measure distance between clusters:
- complete: pairwise similarty between all observations in cluster 1 and 2, uses largest of similarities
- single: same as above but uses the smallest of similarities
- average: same as above but uses average of similarities
- centroid: finds centroid of cluster 1 and 2, uses similarity between two centroids
- complete and average produce more balanced trees and are more commonly used
- single fuses observations in one at a time and produces more unblanced trees
- centroid can create inversion where clusters are put below single values
practical matters * data needs to be scaled so that features have the same mean and standard deviation * normalized features have a mean of zero and a sd of one
# Cluster using complete linkage: hclust.complete
hclust.complete <- hclust(dist(new_df[-1]), method = "complete")
# Cluster using average linkage: hclust.average
hclust.average <- hclust(dist(new_df[-1]), method = "average")
# Cluster using single linkage: hclust.single
hclust.single <- hclust(dist(new_df[-1]), method = "single")
# Cluster using single linkage: hclust.centroid
hclust.centroid <- hclust(dist(new_df[-1]), method = "centroid")plot(hclust.complete, main = "Complete")
plot(hclust.average, main = "Average")
plot(hclust.single, main = "single")
plot(hclust.centroid, main = "centroid")
apply(new_df[-1],2,sd)## X200606_at X200734_s_at X200882_s_at X200910_at X200954_at X201128_s_at
## 0.6425137 0.5434241 0.7359459 0.9496938 0.4565736 1.0281030
## X201184_s_at X201293_x_at X201398_s_at X201441_at X201453_x_at X201516_at
## 0.4154040 0.4949130 0.5496031 0.4337231 0.6280575 0.7400643
## X201527_at X201531_at X201577_at X201584_s_at X201656_at X202541_at
## 0.5278518 1.0399628 0.9409198 0.9529320 0.9893255 0.6889727
## X202737_s_at X202861_at X202940_at X202963_at X203316_s_at X203554_x_at
## 0.8261202 1.1867949 0.3756181 1.0216292 0.9553168 1.5315991
## X203755_at X204018_x_at X204301_at X204428_s_at X204641_at X204977_at
## 1.1706359 1.6902393 0.6539031 1.7626749 1.2094112 0.6042970
## X205019_s_at X205086_s_at X205298_s_at X205306_x_at X205392_s_at X205440_s_at
## 1.5848686 0.4197919 0.4999822 1.6451851 1.2809641 0.8871333
## X205531_s_at X205554_s_at X205740_s_at X205819_at X205858_at X205866_at
## 2.2333442 1.8516625 0.5359662 1.3040374 0.5381475 1.9206992
## X205890_s_at X205911_at X206380_s_at X206453_s_at X206643_at X206680_at
## 1.8636164 0.9961300 0.8860220 1.0417885 1.7083762 1.5287776
## X207076_s_at X207218_at X207262_at X207330_at X207609_s_at X207804_s_at
## 1.2654183 2.0601747 2.1346418 1.6256005 2.4993438 1.5752240
## X207828_s_at X207995_s_at X208079_s_at X208147_s_at X208816_x_at X209189_at
## 1.5147215 1.2633513 1.4660782 2.3529508 1.0394549 2.2805245
## X209219_at X209335_at X209365_s_at X209447_at X209458_x_at X209821_at
## 0.8746473 1.6551853 1.3081645 1.0149378 1.7233101 0.6408022
## X209825_s_at X210095_s_at X210481_s_at X210909_x_at X211023_at X211378_x_at
## 0.9662532 1.4186755 1.2538037 0.7895526 0.4172190 0.4816510
## X211628_x_at X211699_x_at X211745_x_at X211765_x_at X211978_x_at X212149_at
## 0.3937755 1.6263942 1.6957435 0.4975752 0.4612559 0.6405439
## X212551_at X212554_at X212661_x_at X213068_at X213629_x_at X214414_x_at
## 1.3167093 1.5422471 0.4824655 1.1037572 2.4640996 1.6182639
## X214421_x_at X214710_s_at X215138_s_at X215330_at X215768_at X216025_x_at
## 2.1382810 1.5598873 0.2277626 0.8379653 0.9227004 2.0451035
## X216661_x_at X216782_at X217165_x_at X217319_x_at X217414_x_at X217521_at
## 1.9766531 0.3054659 2.2551961 1.9686173 1.6198077 1.7112133
## X218002_s_at X218061_at X219485_s_at X219787_s_at X220017_x_at X220114_s_at
## 1.8887130 0.5436638 0.9655652 1.3443613 2.0023744 1.0922635
## X220116_at X220148_at X220491_at X220496_at X36829_at
## 1.8539806 1.6607159 3.3387035 1.3582285 0.8629149A comparison between k-means and hierarchical clustering will be also considered.
The observation noticed before about increasing the number of clusters for the hierarchical approach leading to more similarity with the 2 actual classes with 1 cluster only corresponding to the normal cases is confirmed here. It can also be seen that this is not the case for k-means, for which starting 5 clusters, no unique cluster will correspond to 1 specific actual category.
for (i in 2:8){
km.out <- kmeans(new_df[-1], centers = i, nstart = 20)
cut <- cutree(hclust.out, k = i)
print(i-1) #iteration number
print(table(km.out$cluster, cut)) #comparing the clusters of the 2 approaches
print("kmeans")
print(table(km.out$cluster, new_df$type)) #comparing the clusters of k-means to actual classes
print("hierarchical")
print(table(cut, new_df$type)) #comparing the clusters of hierarchical to actual classes
}## [1] 1
## cut
## 1 2
## 1 174 1
## 2 1 181
## [1] "kmeans"
##
## 2 1
## 1 172 3
## 2 9 173
## [1] "hierarchical"
##
## cut 2 1
## 1 172 3
## 2 9 173
## [1] 2
## cut
## 1 2 3
## 1 104 1 28
## 2 10 0 33
## 3 0 181 0
## [1] "kmeans"
##
## 2 1
## 1 130 3
## 2 43 0
## 3 8 173
## [1] "hierarchical"
##
## cut 2 1
## 1 112 2
## 2 9 173
## 3 60 1
## [1] 3
## cut
## 1 2 3 4
## 1 49 2 4 1
## 2 60 0 27 0
## 3 0 180 0 0
## 4 5 0 24 5
## [1] "kmeans"
##
## 2 1
## 1 53 3
## 2 86 1
## 3 8 172
## 4 34 0
## [1] "hierarchical"
##
## cut 2 1
## 1 112 2
## 2 9 173
## 3 54 1
## 4 6 0
## [1] 4
## cut
## 1 2 3 4 5
## 1 5 0 24 5 0
## 2 54 0 27 0 0
## 3 55 1 4 1 0
## 4 0 5 0 0 120
## 5 0 37 0 0 19
## [1] "kmeans"
##
## 2 1
## 1 34 0
## 2 80 1
## 3 59 2
## 4 3 122
## 5 5 51
## [1] "hierarchical"
##
## cut 2 1
## 1 112 2
## 2 5 38
## 3 54 1
## 4 6 0
## 5 4 135
## [1] 5
## cut
## 1 2 3 4 5 6
## 1 0 37 0 0 0 21
## 2 55 0 18 0 0 0
## 3 6 0 7 18 5 0
## 4 10 0 6 0 0 0
## 5 43 1 6 0 1 0
## 6 0 5 0 0 0 118
## [1] "kmeans"
##
## 2 1
## 1 5 53
## 2 72 1
## 3 36 0
## 4 16 0
## 5 49 2
## 6 3 120
## [1] "hierarchical"
##
## cut 2 1
## 1 112 2
## 2 5 38
## 3 36 1
## 4 18 0
## 5 6 0
## 6 4 135
## [1] 6
## cut
## 1 2 3 4 5 6 7
## 1 2 0 0 1 18 5 0
## 2 0 10 0 6 0 0 0
## 3 26 17 0 1 0 0 0
## 4 4 30 1 4 0 1 0
## 5 24 1 0 25 0 0 0
## 6 0 0 37 0 0 0 21
## 7 0 0 5 0 0 0 118
## [1] "kmeans"
##
## 2 1
## 1 26 0
## 2 16 0
## 3 44 0
## 4 38 2
## 5 49 1
## 6 5 53
## 7 3 120
## [1] "hierarchical"
##
## cut 2 1
## 1 56 0
## 2 56 2
## 3 5 38
## 4 36 1
## 5 18 0
## 6 6 0
## 7 4 135
## [1] 7
## cut
## 1 2 3 4 5 6 7 8
## 1 0 10 0 6 0 0 0 0
## 2 24 1 0 25 0 0 0 0
## 3 4 30 0 4 0 1 0 1
## 4 26 17 0 1 0 0 0 0
## 5 0 0 5 0 0 0 83 0
## 6 0 0 33 0 0 0 18 1
## 7 0 0 3 0 0 0 38 0
## 8 2 0 0 1 18 5 0 0
## [1] "kmeans"
##
## 2 1
## 1 16 0
## 2 49 1
## 3 38 2
## 4 44 0
## 5 0 88
## 6 4 48
## 7 4 37
## 8 26 0
## [1] "hierarchical"
##
## cut 2 1
## 1 56 0
## 2 56 2
## 3 4 37
## 4 36 1
## 5 18 0
## 6 6 0
## 7 4 135
## 8 1 1- SVM
new_df$type=factor(new_df$type,labels=c(0,1))
classifier = svm(formula = type ~.,
data = new_df,
type = 'C-classification',
kernel = 'linear',scale=TRUE)
print(classifier)##
## Call:
## svm(formula = type ~ ., data = new_df, type = "C-classification",
## kernel = "linear", scale = TRUE)
##
##
## Parameters:
## SVM-Type: C-classification
## SVM-Kernel: linear
## cost: 1
##
## Number of Support Vectors: 37A training accuracy of 100% is reached using svm.
probs <- predict(classifier, newdata = new_df,type='response')
pred <- rep("HCC",nrow(testing))
pred[probs ==1] <- "normal"
t = confusionMatrix(as.factor(pred), reference=factor(new_df$type,labels=c('HCC','normal')))
t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 108 0
## normal 0 176
##
## Accuracy : 1
## 95% CI : (0.9871, 1)
## No Information Rate : 0.6197
## P-Value [Acc > NIR] : < 2.2e-16
##
## Kappa : 1
##
## Mcnemar's Test P-Value : NA
##
## Sensitivity : 1.0000
## Specificity : 1.0000
## Pos Pred Value : 1.0000
## Neg Pred Value : 1.0000
## Prevalence : 0.3803
## Detection Rate : 0.3803
## Detection Prevalence : 0.3803
## Balanced Accuracy : 1.0000
##
## 'Positive' Class : HCC
## The testing accuracy is also shown to be in the order of 95% (both repeatedcv and the validation set approaches are used)
new_df = new_df %>%
dplyr::mutate(id=row_number())
training = new_df%>%
slice_sample(prop=0.7)
nrow(training)## [1] 249testing = anti_join(new_df,training,by='id')
nrow(testing)## [1] 108training = training%>%
dplyr::select(-id)
testing = testing%>%
dplyr::select(-id)
new_df=new_df[-ncol(new_df)]classifier = svm(formula = type ~.,
data = training,
type = 'C-classification',
kernel = 'linear',scale=TRUE)
probs <- predict(classifier, newdata = testing,type='response')
pred <- rep("HCC",nrow(testing))
pred[probs ==1] <- "normal"
t = confusionMatrix(as.factor(pred), reference=factor(testing$type,labels=c('HCC','normal')))
t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 53 0
## normal 4 51
##
## Accuracy : 0.963
## 95% CI : (0.9079, 0.9898)
## No Information Rate : 0.5278
## P-Value [Acc > NIR] : <2e-16
##
## Kappa : 0.926
##
## Mcnemar's Test P-Value : 0.1336
##
## Sensitivity : 0.9298
## Specificity : 1.0000
## Pos Pred Value : 1.0000
## Neg Pred Value : 0.9273
## Prevalence : 0.5278
## Detection Rate : 0.4907
## Detection Prevalence : 0.4907
## Balanced Accuracy : 0.9649
##
## 'Positive' Class : HCC
## train_control <- trainControl(method = "repeatedcv")
model <- train(type ~., new_df,
method = "svmLinear",
trControl = train_control)
print(model)## Support Vector Machines with Linear Kernel
##
## 357 samples
## 107 predictors
## 2 classes: '0', '1'
##
## No pre-processing
## Resampling: Cross-Validated (10 fold, repeated 1 times)
## Summary of sample sizes: 321, 321, 321, 321, 321, 321, ...
## Resampling results:
##
## Accuracy Kappa
## 0.9693651 0.938769
##
## Tuning parameter 'C' was held constant at a value of 1The corresponding expression values for each of the 37 support vectors can be also examined.
classifier$SV## X200606_at X200734_s_at X200882_s_at X200910_at X200954_at X201128_s_at
## 8 -1.64059976 1.10198801 1.0105922 1.3827424 1.65792555 1.30627724
## 10 -0.18329750 -0.32705423 1.4836780 1.3762054 -0.43732609 0.45123307
## 62 0.29053107 0.06642686 -1.3502220 -0.7161997 0.46082720 0.81657799
## 74 -2.36302733 0.41982202 -1.4473256 -1.5306852 -2.38292398 -1.13528269
## 99 -0.44420327 0.49383095 -0.6481264 -0.8252167 0.24099171 -1.06066507
## 110 -0.60662081 -0.26210795 -0.1427810 -0.6799343 -0.03639187 -0.88910845
## 115 0.53109562 3.27905497 1.4177077 1.0630400 -0.43016310 0.69535540
## 121 0.12940311 0.48328928 -0.2944970 -0.8271406 -0.46196089 -0.90638639
## 142 -0.43937807 0.83068003 -0.3582112 -0.9879868 -1.46053578 -0.39068255
## 155 -0.10136938 0.13011770 -0.6833861 -0.4079541 0.43302503 -0.30858877
## 166 -1.04513133 0.58316557 -0.6251011 -0.4054930 -0.12816259 -0.96727332
## 211 0.13302158 0.65181333 -0.7753007 -0.4217642 0.78070290 -0.52292985
## 236 -0.42688315 0.60700089 -0.7224269 -0.6986992 0.23536741 -0.61819076
## 22 -0.15932015 0.74621450 0.4567146 0.8152632 -0.35113464 -0.12156003
## 36 0.73107349 0.87922545 0.9490717 0.8685113 0.24391189 0.47982183
## 44 -2.24235751 1.61517856 1.0099043 0.1645435 1.04352204 0.58588632
## 92 -4.38685740 0.08337181 -0.2723999 -0.5456098 -1.89036923 0.50860017
## 96 -0.25649099 -0.03760843 1.1270266 -0.1782018 -4.50861936 1.30041706
## 102 -0.49662155 1.10119880 1.0501968 0.4928607 0.58166493 0.61172195
## 107 -0.14750277 -1.66147920 1.6693344 1.0996422 -0.50732111 -0.02916910
## 129 0.65809447 -0.64851468 -0.4436731 -0.8024484 0.63406947 0.47753266
## 161 -0.07564586 0.05742668 0.4754003 0.8283810 -0.05350056 1.19938099
## 165 -1.40468224 -1.51131780 -0.9445547 -1.3107175 -3.59985155 -3.18202495
## 187 -0.74054526 0.98863775 -0.6991212 -0.3724925 -0.05004165 -0.01761949
## 190 1.47745837 2.49548930 1.1763719 0.1704399 0.17330676 0.58580677
## 194 -1.04357118 1.01271992 0.7769752 0.4905065 -2.25027715 -0.04561825
## 222 -0.21254573 -0.66361894 0.3786125 0.1861952 -0.97842539 0.59286886
## 239 -1.57022216 1.13358090 0.6541451 0.2992078 1.05418775 -0.24210935
## 249 0.44942820 2.67481819 1.0187304 0.3166841 1.41724540 2.12494620
## X201184_s_at X201293_x_at X201398_s_at X201441_at X201453_x_at X201516_at
## 8 0.756554299 1.20888386 1.00551348 3.19234773 0.22303096 1.85036854
## 10 1.895136510 -0.19731240 -1.21131587 1.23137591 0.39252337 -0.15434074
## 62 1.099544963 0.30741563 0.62670625 -1.30920600 -0.29831905 0.54362766
## 74 -1.405056977 -2.30218280 -3.05934752 -0.01547598 -1.68564841 -1.81027107
## 99 -0.406263144 -0.49149841 0.17582391 -0.56030336 -0.46787111 -0.66109597
## 110 -0.466130540 -0.47684282 -0.69377155 -0.77955557 -0.59245457 -0.87844788
## 115 0.002516258 -0.10118889 1.09563087 -0.31762030 0.35083482 0.75503137
## 121 -0.829232649 -0.64906806 -0.70097661 0.26252010 -0.71063630 -0.26894279
## 142 0.435473349 -1.17045030 -0.14528319 -0.92301766 -0.99402525 -0.44719478
## 155 0.199578753 0.15532294 -0.04396534 -0.31466483 -0.70980893 0.10532926
## 166 0.561998093 -0.49524763 -0.93567865 0.27523876 -1.29973967 0.24706673
## 211 -0.645072966 -0.23955473 -0.09072819 -0.30239071 -0.53428612 -0.15181376
## 236 -0.074578744 -0.51817787 -0.71437423 -0.11660162 -1.02214378 -0.20377941
## 22 0.910245127 0.80407271 -0.89906755 1.42895467 0.18225918 0.25219614
## 36 -0.007599415 1.42110958 1.58648617 1.25560818 0.79387463 0.86742106
## 44 2.717272791 0.51598393 -1.55680731 0.42301493 -0.11124309 0.78411794
## 92 0.795548537 0.16301599 0.09712748 -1.40548084 -0.45605745 0.38881660
## 96 -1.459433847 -2.51414948 -0.69010350 -1.64486024 0.09807542 -1.15409129
## 102 -0.674423055 0.18625887 0.94714341 1.26750582 1.07428797 0.74716573
## 107 -0.311317683 0.27308342 -0.23903224 2.24709515 0.68762333 1.58458868
## 129 0.228042396 -0.81040410 0.52046830 -0.63854861 0.11788899 -0.27265677
## 161 -0.553595718 0.88997067 1.37636263 -0.06425360 0.95185624 0.47930327
## 165 -0.284051235 -1.70914092 -2.94303245 -2.03287732 -3.45216899 -0.02713578
## 187 0.998900407 -0.57895770 -0.24092503 -0.18484376 -1.10272896 -0.78204297
## 190 1.173767781 0.51437007 -0.30797736 3.16400262 0.36801352 0.31504102
## 194 2.092825213 -0.84298179 0.57023327 -0.06128863 0.46107065 0.15833138
## 222 0.697385983 -0.04103814 -1.23659571 1.47427103 -0.75236566 -0.36717948
## 239 1.717953860 0.20627391 0.12757958 2.15797371 1.15875743 0.17321198
## 249 -0.933848699 0.34592025 0.91293053 1.57726043 0.45230884 -0.32774256
## X201527_at X201531_at X201577_at X201584_s_at X201656_at X202541_at
## 8 1.63537553 -0.18083342 1.40437800 3.693539100 -0.91072210 1.17708427
## 10 0.46204528 0.01452333 0.71911317 1.358257862 -0.56937795 -2.05891299
## 62 0.33372291 2.49076752 -0.94021094 -0.052354623 1.54059928 -1.33553226
## 74 -0.94424017 0.86378025 -1.23199626 -0.003970374 -0.70045010 -2.20990808
## 99 -0.17003247 -1.07828676 -0.62877683 -0.992769915 -0.69116659 -0.42535727
## 110 -0.92613247 0.99758589 -0.51786612 -0.688741596 -0.46365804 -0.54418618
## 115 -0.35340605 -0.54089534 -0.41600100 0.135555772 0.01070968 0.10242399
## 121 -1.02319409 0.73636018 -1.33117158 -1.184154097 -0.79804905 -0.54398392
## 142 -0.56652473 -0.24583676 -1.11353836 -0.901778911 -0.41179613 -0.03676945
## 155 -0.44441405 0.39305716 0.05213455 -0.529477155 0.04588464 0.28585535
## 166 0.53843860 0.60193469 -0.60543171 -0.175550396 -0.70988570 -0.40531844
## 211 -0.66107927 0.75261265 -0.35709606 -0.590443852 -0.07969409 0.14013989
## 236 -0.20939019 0.25195145 -0.53099875 -0.606257255 -0.41597628 -0.70257948
## 22 1.08081834 -1.50296110 0.90934648 0.904109290 -0.04471012 0.69224513
## 36 1.20894806 -0.01271542 1.32453324 1.727664553 0.08770822 0.59413952
## 44 1.63891506 0.35201766 -0.52063233 1.561675790 -0.36000741 -1.25915147
## 92 -0.74988953 -0.45632244 0.12336699 0.093018244 2.07943549 1.04004642
## 96 -3.13812387 -1.84398824 -0.92823746 -0.091564396 0.74037746 1.20297997
## 102 0.05178538 0.39498188 1.05379525 -0.895433177 0.12848370 -0.26777395
## 107 0.81130799 0.60929439 0.77675960 0.503837559 -0.32568205 -0.55507204
## 129 -0.36879634 -0.32465192 -0.30957292 -0.450730281 0.22017532 1.04110689
## 161 -0.80886128 0.76122411 1.44791846 0.409496609 0.35585168 0.09868380
## 165 0.05682158 -1.92309539 -1.74170149 -1.096506960 -0.10035594 -1.40553078
## 187 0.56491583 0.85980767 -0.77347789 0.241877605 -0.23288494 -0.28489426
## 190 1.78789686 -1.46373130 0.71915599 -0.127837678 0.61460074 -0.17730355
## 194 -0.89260390 -1.60742054 0.54313650 0.193487431 0.33487555 -0.25438714
## 222 -1.45182702 -0.96907819 0.22387385 1.046154782 -0.33962273 -0.42036989
## 239 0.91689221 0.12987021 0.20358437 0.400359680 0.06720697 -1.48704655
## 249 0.09892744 0.11263520 0.37643978 -0.351276809 0.77622743 -0.33849834
## X202737_s_at X202861_at X202940_at X202963_at X203316_s_at X203554_x_at
## 8 1.06733450 0.29116352 0.575799744 0.37778120 1.1018333 1.68631351
## 10 -1.23405040 0.85525173 0.510533316 0.87874792 1.1101191 0.52497733
## 62 -1.28829188 1.83861246 1.058284142 -0.26261814 -0.6527979 -0.72469234
## 74 -1.61620046 0.57566557 3.440328086 -0.42628352 -2.5288700 -0.57529317
## 99 -0.64169036 -0.24781099 0.060933068 -0.77415656 -0.7500198 -0.64947106
## 110 -0.46626672 1.04679881 -0.932753772 -0.44677425 -0.7512940 -0.96664101
## 115 1.34038637 0.01639528 -0.712632546 0.39808744 0.6701979 0.56588766
## 121 -0.46435448 1.44760464 -1.097260089 -0.68752349 -0.5793919 -0.96623604
## 142 -0.74887078 -0.24148883 1.058928692 0.02693112 -0.4758075 -0.52561586
## 155 -0.32597760 0.45115423 0.121865479 0.39389143 -0.3634539 -0.83716901
## 166 -1.91312830 -0.10532888 -0.601794275 -0.62801222 -1.0719043 -0.33741749
## 211 -0.58372730 0.39755372 -0.081638443 -0.03362829 -0.6326146 -0.58488434
## 236 -0.29011645 0.14736779 0.778235092 -0.40470566 -0.5967729 -0.67500830
## 22 0.60589201 0.10834630 -0.635388453 0.72706482 0.8848579 1.08772804
## 36 1.42671140 -0.06599050 -1.315208279 0.91050270 1.1388570 1.42380755
## 44 0.47665706 -0.52088606 1.925455294 -0.41436503 -0.8993047 0.84718617
## 92 -0.46494604 -0.81576299 1.168992829 0.73306141 0.1363847 -0.41887995
## 96 -1.13735814 -1.28983987 -0.188674656 2.05385087 2.0294892 0.57991628
## 102 0.17205769 -0.41685073 -1.246442190 0.23541393 1.3875235 0.07312195
## 107 -1.12776713 -0.94114436 -0.911323665 0.08031431 1.0514710 0.69243652
## 129 -0.30329514 0.13982304 -0.009499391 -0.38057187 -0.1742960 -0.54748129
## 161 2.06196197 0.02873498 -0.367932619 0.65000571 0.8666202 0.90127712
## 165 -1.56995536 0.95128513 -1.555482304 -1.74467997 -3.0996354 -0.76145144
## 187 -0.90268524 0.51093221 1.044471627 0.34526193 -1.0413667 -0.18877514
## 190 1.09456958 0.18827120 -1.165247226 0.44191815 0.6901651 0.88097918
## 194 -0.29896662 -0.65769492 0.170423478 1.49091493 1.1473283 0.79451349
## 222 0.25351146 -1.11071704 3.050254245 -0.25436320 0.4466460 0.43355292
## 239 0.36267426 0.43479251 -1.515263199 1.31301617 0.5177799 0.78930995
## 249 0.08816589 0.73604021 -0.205930576 0.33849869 0.3855286 -0.33332569
## X203755_at X204018_x_at X204301_at X204428_s_at X204641_at X204977_at
## 8 1.0267310 -0.622896961 -0.81551043 -1.3742550 1.95234394 0.714626351
## 10 -0.0644685 -0.831999084 -0.39080871 -0.5449467 0.05708824 0.834073621
## 62 -0.4899246 2.981140532 0.87183726 -0.6741551 -0.80769880 -1.275716511
## 74 -0.5882360 1.248288630 -0.50964598 0.3650684 -0.75990049 -1.710400125
## 99 -0.9564413 1.068069858 0.45384144 0.8452153 -0.89253478 -0.904267908
## 110 -0.9121743 0.266250728 1.16598254 0.8772407 -0.87066163 -0.524129005
## 115 0.1086217 0.833963219 -0.92009512 -1.1317117 0.90141594 -0.114372983
## 121 -0.5019843 -1.017172387 0.67467880 1.3360243 -0.69082461 -0.181586229
## 142 -0.3926619 -0.689220477 0.80011890 0.5317417 -0.68913155 -0.437049865
## 155 -0.8169379 0.419450982 -0.38152973 0.4225647 -0.87128161 -0.426949992
## 166 -0.7539023 0.508832922 0.63699391 0.9508537 -0.67458073 -0.779567122
## 211 -0.4551514 1.473497044 -0.27037676 0.6580485 -0.74880940 -0.245570339
## 236 -0.7003023 0.380585228 -0.41219907 0.7152923 -0.88221849 -0.603627472
## 22 -0.1135170 0.894634685 0.10954590 -1.1625389 0.22171269 0.771239893
## 36 0.8595226 -0.238373159 -0.71351797 -1.4723966 0.85650801 0.212996172
## 44 0.3411568 -0.242272847 -0.16157313 -1.5949946 0.25500700 -1.161336157
## 92 -0.7844285 1.473651565 -0.75938253 -0.4976416 -0.63467698 1.212477318
## 96 0.7197994 -1.312503399 -1.29053505 -1.1508218 0.54835624 2.260457311
## 102 -0.4300385 0.002706901 -1.04495905 0.5201415 0.02046430 1.306403924
## 107 -0.2382110 -0.890981598 -0.70768343 -1.4406775 -0.17256284 -0.058001743
## 129 -0.7821426 -1.273343369 2.00388732 0.5335876 -0.74469491 0.547818409
## 161 0.8140321 -0.673437980 0.09364804 -0.3425696 1.29059998 0.313321501
## 165 0.0287578 -0.600757760 -0.23901562 1.0900233 -0.27404124 0.006256714
## 187 -0.6511662 1.194478870 -0.80728404 0.6645600 -0.79996704 -0.990435383
## 190 1.2978558 -0.210433243 -1.11193757 0.1684736 1.24099570 0.597275398
## 194 0.7318008 -0.288132486 -0.26281306 -1.1484671 0.81269569 1.084647032
## 222 -0.2130316 0.285598257 -0.94539009 -0.3504986 0.02151311 1.560702500
## 239 0.3815108 -0.288744890 -0.89131538 -0.7696724 0.07065066 -1.663473988
## 249 -0.6425458 -1.324395326 -0.86857596 -1.4777977 -0.59173319 0.497907838
## X205019_s_at X205086_s_at X205298_s_at X205306_x_at X205392_s_at
## 8 -0.9596776 -1.25176104 -1.583171020 0.2704157 -1.502998521
## 10 -0.5912578 0.28759068 -0.168310327 1.2144884 0.831030732
## 62 -0.6333274 -1.13237731 0.006183685 -0.7007336 0.126254792
## 74 1.0482786 -0.47549518 -0.462222604 0.6536911 0.414657248
## 99 0.7739252 -0.68032773 -0.648354130 0.7027921 0.358544725
## 110 0.6326008 -0.57893031 0.167974360 0.7322898 0.307262666
## 115 -1.1235002 1.03116200 1.138380759 0.2078087 -0.128419541
## 121 1.4742443 -1.02001697 0.503852716 0.9558421 -0.110344627
## 142 0.3484301 -0.36982779 -0.206436397 0.4071696 1.167342086
## 155 0.3732774 -1.07490747 1.078229657 0.9541690 0.005792791
## 166 0.7052569 -0.94669021 -0.169496248 0.3376030 1.151124569
## 211 0.5059274 -0.57371093 -0.004904978 0.6722703 0.233690009
## 236 0.5630598 0.21175620 -0.459614304 0.9021340 0.418136926
## 22 -1.1647028 3.72996869 -0.206688611 -1.0578759 -1.403747517
## 36 -0.8351951 0.37818641 -0.922630429 -0.1797398 -0.940139082
## 44 -0.2941499 0.59866655 -0.532124489 -1.7368751 -0.625610552
## 92 -0.3601818 -0.97682450 0.932956821 -1.5270346 -0.062041674
## 96 -0.7360281 -1.18037108 -0.108352157 0.2329491 -0.571988466
## 102 -0.4591317 -1.16346163 -0.136314739 1.5097059 0.216881139
## 107 -0.4620166 0.83018394 -0.460102518 0.3447441 0.109716415
## 129 0.5676047 -0.02063399 -0.978741354 0.3151827 -0.434732754
## 161 0.1134218 0.01227642 -0.108202984 0.4481778 -0.585956298
## 165 -0.1729711 0.35984675 3.535867178 -0.3586881 -1.447814064
## 187 0.5024066 -0.57762633 1.812154532 0.5736152 0.237502982
## 190 -0.8372432 0.01300403 0.700065812 0.3423588 -0.043596167
## 194 -0.9901274 0.39739106 -0.476663850 0.3583009 -0.156654339
## 222 -0.6027179 -0.62141846 -0.741780775 0.3322547 0.435005435
## 239 -0.6027396 0.76721529 -1.005054597 0.1281072 0.172807813
## 249 -0.9697585 -0.73181231 0.230706410 0.4412067 0.146982639
## X205440_s_at X205531_s_at X205554_s_at X205740_s_at X205819_at X205858_at
## 8 2.38467734 -1.49727822 -1.75691148 1.20920786 -0.76753585 -0.9549590
## 10 -0.43959618 0.15007651 0.48167200 -0.23038416 -0.85785801 -0.7593031
## 62 -0.06037469 -0.72625181 -0.61470063 -1.07658763 -0.41834125 0.6681534
## 74 -0.79346310 0.18940268 0.17691010 -0.02330290 -0.09973440 -0.1617331
## 99 -0.11549667 0.90015207 0.80596511 -0.69424288 1.10836307 1.6309069
## 110 0.08981187 0.87696811 0.01257866 -0.72277184 0.29236505 1.3547512
## 115 -0.59981432 -0.06432748 -0.65393410 0.97748789 -0.85016145 -0.8302615
## 121 0.26313367 0.95096411 0.22474186 -1.48820416 -0.86036888 -0.4887372
## 142 0.75421770 0.14942404 1.19203073 -0.97642237 1.07790565 -0.3379742
## 155 1.33847446 0.94494099 0.40533656 -0.98677635 0.51732944 0.5187849
## 166 0.06287660 0.55799303 0.58973945 -0.80554439 2.28890801 0.1141096
## 211 0.17891897 0.74357312 0.11734813 -0.86707006 1.12444176 0.6172735
## 236 0.44752015 1.01028298 0.01525231 -0.27061813 0.50537636 -0.2058833
## 22 -0.95210027 1.12382302 -1.40598174 0.97164395 -0.90049855 -0.9677694
## 36 -0.72521782 -0.02050360 -1.04094023 0.26258507 -1.00959369 -1.2431740
## 44 -0.54216387 -1.30034537 -1.43237287 0.05190467 -0.59222936 -0.2216911
## 92 4.86343419 -1.17548849 -0.18539028 0.21412486 0.42952286 0.2547314
## 96 -0.49326909 -0.84367090 -0.80144189 -0.75365942 -0.85189294 -0.7735432
## 102 -0.71531495 0.27611100 0.29826898 0.52224912 -0.96504853 -1.0257292
## 107 -0.66275386 -1.56426897 0.08945522 1.01677100 -0.88516921 -0.5334465
## 129 0.21091733 -0.60862669 0.83147243 0.32269578 -0.59813858 -0.2158053
## 161 0.31812954 -0.02234907 0.48342400 0.67092404 0.22406978 -0.2223666
## 165 -0.85932234 0.77659141 -1.09030078 -1.11018794 0.02582375 -0.8881669
## 187 -0.15831155 0.06747102 0.49375919 -0.47835760 1.47620948 -0.1624285
## 190 -0.99501559 0.62129195 -0.52860994 2.48774988 -1.02543891 -0.5164603
## 194 -0.85062936 0.75121490 -0.70153913 -0.70529727 -0.61385774 -0.6336209
## 222 -0.59316646 -0.02663195 0.37158655 0.77204666 -0.64661439 -0.4425350
## 239 -1.17377929 1.05462088 0.01680786 1.49245414 -0.61139749 -0.4091476
## 249 -1.01961153 -0.79909042 -0.42040533 -0.07331491 -1.02061246 -0.8668023
## X205866_at X205890_s_at X205911_at X206380_s_at X206453_s_at X206643_at
## 8 -0.93666427 0.401717469 -0.8129154 -0.951042113 -0.9919099 -1.26964686
## 10 -0.15884491 1.004034921 -0.9330210 -0.175633894 -1.4117229 0.46979235
## 62 -0.86479428 -0.008752853 -0.4151792 -1.086071905 0.1344872 -0.17553224
## 74 0.35733183 0.726318102 0.7471108 0.550428771 0.4312402 -0.04639462
## 99 0.81051408 -0.137272174 0.2467126 -0.190812396 0.4668837 0.04904117
## 110 0.65929959 -0.533656346 0.9604665 0.007838921 0.4747293 0.11005549
## 115 -1.10567322 0.865814624 -0.9120676 -0.823538908 -0.6412809 0.73116666
## 121 0.02538337 -1.278243559 -0.4622460 -0.204347145 1.5765404 0.43094128
## 142 1.02671531 0.022255490 0.5766882 0.851789187 0.3656884 -0.31654964
## 155 0.52127006 0.642030188 0.1689407 0.175427787 0.6738464 0.16042281
## 166 0.92111971 0.185621789 0.2602579 1.376737871 0.2963900 0.20015042
## 211 0.02856916 -0.082692176 0.5082917 0.082970885 0.8987895 0.29360993
## 236 0.08168347 -0.194107197 -0.1735230 0.346424366 0.8468007 0.31209221
## 22 -0.88206812 0.970671767 -0.9798253 -0.863299870 -0.8433660 0.48193131
## 36 -0.31201950 -0.180166576 -0.5571452 -0.577902739 -0.1691042 1.16956360
## 44 -0.90533957 -0.011785600 -0.3118789 -0.312147740 -1.2532624 -1.23601214
## 92 -0.31448991 -1.699516404 0.3967183 -0.613390909 -0.7062398 -1.96675738
## 96 -1.37581891 0.682510981 -0.3385295 -1.081362065 -2.1932850 -0.08632555
## 102 -1.25875552 -1.655038277 -0.8997643 -0.956769749 -0.7648589 0.12905936
## 107 0.25226299 0.860384293 -1.1451864 -0.339871649 -1.8213775 0.43330009
## 129 1.05765328 -0.255437332 -0.1588102 0.350819220 0.6718507 -1.07295897
## 161 0.30261734 0.811595122 -0.4741169 -0.164801456 -0.1516606 -0.15975629
## 165 -0.35323116 -1.172160323 -0.1586096 -0.594534799 0.2190353 0.04715660
## 187 0.83481974 0.751940811 0.1089599 1.611857883 0.6380235 -0.82967083
## 190 -0.89322562 0.110089329 -0.9636646 -0.878364642 -0.6508412 0.55058850
## 194 -1.01592507 0.978913426 -0.5136255 -0.786130567 0.0529160 1.04155434
## 222 -1.14046530 0.450568654 -0.8911611 -0.496920558 0.1886646 1.04002107
## 239 -1.07542284 0.761027669 -1.0267451 -1.126530722 0.2529296 -0.04636498
## 249 -1.23198413 0.096868158 -0.9275791 -0.953956598 -0.2666908 0.54577305
## X206680_at X207076_s_at X207218_at X207262_at X207330_at X207609_s_at
## 8 -1.29175991 -0.243219408 -1.6257587 -1.4489299 2.609157346 -0.9209470
## 10 0.27861311 0.004087471 0.1566530 -1.0220792 -0.495809543 -0.8746721
## 62 -0.93598253 -0.245729956 -0.7955133 -0.4589223 -0.955974622 -0.9249025
## 74 1.25340410 -0.272894734 0.4010565 -0.8621345 -0.522985852 0.9029035
## 99 0.83423325 0.567954626 0.7400047 0.4225090 0.155940883 0.3120999
## 110 0.69315630 0.860199086 0.5848466 0.2355039 -0.684115076 1.2212907
## 115 -1.22062139 -0.755385474 0.7291324 0.7143033 1.999876597 -1.0331285
## 121 -0.08000500 0.968796191 0.6922768 1.0492642 0.008344729 0.8560536
## 142 1.66871069 0.120963722 0.6607563 0.8675456 0.168213657 0.7816583
## 155 0.67297915 0.990793671 0.4180797 0.5321321 0.223934114 0.2011002
## 166 1.00652371 0.373980055 0.7627456 0.9346914 0.570267397 0.1923575
## 211 1.31867730 0.422337390 0.5684520 0.6882822 -0.331974019 0.2230571
## 236 0.48010064 1.125437733 0.5709231 0.7421814 -0.190786746 0.7997129
## 22 -1.55002747 0.636414925 0.4693862 -0.8330339 -0.562310444 -1.2310096
## 36 -0.89336561 0.011963648 -0.9463508 -0.7385536 -0.042947989 -0.7999281
## 44 -1.30668348 -2.535104580 -3.2663281 -1.2983266 2.142074711 -0.9772164
## 92 -0.10147056 -1.390383462 -0.5716426 -0.3990096 0.597498646 -0.5348768
## 96 -0.77815667 -2.426047630 -0.4948597 -0.9735299 -0.337159435 -0.8080691
## 102 -0.14039602 -0.130399789 0.9304072 0.1352240 -0.590357995 -0.9670854
## 107 -0.06380796 -1.186163014 -0.8014731 -1.2080662 -0.836397832 -0.8319338
## 129 0.10569691 -0.085976540 0.5061473 0.2133775 2.200228472 0.9546990
## 161 0.08697921 0.058301855 0.2479932 0.5777704 1.116886645 0.4731670
## 165 -0.33142093 0.866000599 0.5864696 0.8209058 0.013877005 0.9815986
## 187 0.87266100 0.410887540 0.5499459 0.2424030 0.954118505 0.4292069
## 190 -1.40072562 -0.873761533 0.4145320 -1.5126209 -0.884221747 -0.9207254
## 194 -0.36059896 -0.638495907 0.4159354 0.7292761 -0.535407194 -1.0674363
## 222 0.06453341 -0.022079567 -0.4868495 -0.9704069 -0.728951793 -0.9966151
## 239 -1.59623004 0.606379288 0.3121544 -0.3291852 -0.928595602 -1.1585622
## 249 -0.92113182 -0.509749894 0.5327335 0.2708597 -0.621619138 -0.8670749
## X207804_s_at X207828_s_at X207995_s_at X208079_s_at X208147_s_at
## 8 -0.772918387 1.577313233 -0.88545178 2.43677987 -0.56898880
## 10 -0.510970456 0.781320877 -0.97729662 2.32793283 -0.11483493
## 62 -0.300246828 -0.169145420 -0.60818158 -0.93679254 -0.44778397
## 74 0.379065769 -0.812848881 -0.43411862 -0.68246944 0.73305660
## 99 0.186802793 -0.764279902 -0.29404681 -0.85845563 0.73432406
## 110 0.323612707 -0.769511632 0.04330411 -0.43498631 0.85850658
## 115 -1.005051135 -0.002192597 -1.08850201 1.19516467 0.34826223
## 121 -0.240905004 -0.565064497 0.60672510 -0.92955511 0.92262827
## 142 2.184865787 -1.052917663 -0.22357406 -1.03800765 0.67363030
## 155 -0.003112373 -0.736506531 0.45538685 -0.21386946 0.44393307
## 166 0.375098374 -0.750183570 1.34532020 -1.17838589 0.13236620
## 211 0.336354086 -1.126664508 -0.59752268 -0.09626877 0.65103795
## 236 -0.442225582 -0.918227063 -0.64535605 -0.51714536 0.77836905
## 22 -0.778874477 1.080384259 -0.80259392 1.61305795 -0.06308550
## 36 -0.998944594 1.127784436 -0.81700784 1.19214187 0.02078724
## 44 -0.530403246 1.322508479 -0.84336366 1.89611565 -0.70100516
## 92 -0.493848611 -0.728962031 -0.84090372 -1.07985794 0.01999427
## 96 -0.760453460 0.515219870 -0.96205231 1.34418474 -0.08977994
## 102 -0.997197903 0.100708940 -0.90242000 0.41579609 -0.64586023
## 107 -0.719175478 0.972136772 -0.65523515 0.40613806 -0.27429067
## 129 0.005083354 -1.036798330 -0.78461708 -0.99638702 0.76420886
## 161 0.020177509 0.962754019 -0.68830410 0.70534030 0.48788910
## 165 -0.257815887 -0.291874416 0.21402395 -0.70476895 0.93796050
## 187 0.259553973 -0.951932871 -0.30650356 -0.53494902 0.65811489
## 190 -0.893035602 0.311375563 -0.63300918 2.50372737 -1.30206945
## 194 -0.875175317 0.576999245 -1.08995175 0.69786827 0.46755056
## 222 -0.913709741 0.618287283 -0.63599457 0.46013552 -2.17213798
## 239 -0.603060730 1.064494314 -0.81045751 1.20178383 -0.40242446
## 249 -0.784945798 -0.641717011 -0.88261095 -0.04287659 0.13951501
## X208816_x_at X209189_at X209219_at X209335_at X209365_s_at X209447_at
## 8 0.29354429 -0.9217903 -0.56182366 -0.60052175 -0.9420169 -2.06842203
## 10 -1.09999948 -1.4195537 0.37977340 -0.84917456 -0.6667656 0.61569583
## 62 1.63369444 1.6619641 -0.09479346 1.61273882 0.3986760 -0.53779122
## 74 -0.63357625 0.4800730 -1.17842859 0.62780942 0.5032366 1.28457477
## 99 -0.07889744 -0.8898598 -0.99979800 1.07785936 0.9838016 0.19406722
## 110 -0.31260313 0.9566130 -0.76892366 0.53851438 0.9017051 0.66868821
## 115 -0.32280945 -0.0674268 1.38954350 -1.22973174 -1.1716062 -1.02656483
## 121 -1.55782852 1.0423063 -1.11073202 1.08220096 1.4341043 1.00161169
## 142 -0.12900846 0.1269146 -1.05951522 1.79357794 0.6950103 0.94860078
## 155 0.11067054 0.7309192 -0.64832507 1.36106340 0.5037735 0.24625031
## 166 0.20516943 0.3934196 -0.90067665 0.41156181 0.6194562 0.60208483
## 211 -0.14191850 0.8180475 -1.05498028 1.28764415 0.4712379 0.62223368
## 236 -0.21637250 0.8595392 -0.56208965 1.03858647 0.3887075 0.62481210
## 22 -0.44188180 -0.7158669 -0.08309459 -1.46278738 -1.0811365 -1.40308056
## 36 0.78170822 -0.6171163 1.44196722 -0.56270653 -0.5894104 -0.95905252
## 44 0.50456263 -1.0531471 1.10990619 -1.43971471 -0.7136292 -1.26838567
## 92 1.44252666 0.2295464 0.28077821 1.50518625 -0.1068219 1.73128257
## 96 0.34135253 -1.7113168 -0.73350339 0.47572172 -0.8761737 -1.14891116
## 102 -0.78263578 -1.0430998 0.45892054 -1.26659279 -0.9410878 -0.21906823
## 107 0.77163953 -0.4009516 1.91026960 0.09819385 -0.5975134 -0.77217194
## 129 0.34479996 0.2068709 -0.37395138 1.09522840 0.1609084 1.14173628
## 161 0.69269840 0.7774138 0.63531578 0.45511279 0.3078294 -0.18909076
## 165 0.04871960 -0.7580265 -1.45426750 -0.23181960 -0.1332576 0.03209865
## 187 -0.09334533 0.4384588 -1.02916805 1.12670301 0.5055351 0.77255261
## 190 0.48762125 -0.9696024 1.27386525 -1.17161667 -1.0101926 -1.33015360
## 194 0.22874330 -1.1469422 0.05237353 -1.63063080 -0.9834619 0.21883568
## 222 -0.08446306 -0.6129111 -0.38661541 -1.25922224 -0.9788156 -0.13039453
## 239 0.57330705 -0.8982093 0.27637881 -0.93203126 -0.8506758 0.03664943
## 249 0.65063319 -0.6752706 1.00662745 -1.44882741 -1.0088508 -0.28070785
## X209458_x_at X209821_at X209825_s_at X210095_s_at X210481_s_at
## 8 -0.74049382 -1.02402666 0.98795699 1.66449911 -1.0886525215
## 10 -0.74616915 -0.14098434 1.09562023 -1.25888469 -0.4912658016
## 62 2.96445014 0.46385763 -0.26243832 0.47260264 -0.7907193865
## 74 1.22497940 -0.67724060 -1.25214846 0.76647600 0.7012308488
## 99 1.07256690 0.21100705 -0.80802013 0.90840531 0.3650257911
## 110 0.24082627 -0.82820418 -0.86238744 0.57132820 0.6209580179
## 115 0.84211048 1.84926329 0.46701615 -1.39108436 -1.1155981350
## 121 -0.93429729 -0.63433545 -0.77752436 0.98807261 -0.1413570128
## 142 -0.68465464 2.00099917 -1.11163114 0.93111321 0.2546836773
## 155 0.40280665 0.07072683 -0.96882447 0.70983526 0.3101241012
## 166 0.67405949 -0.22287057 -0.79516680 0.56202815 2.3040330481
## 211 1.46527626 -0.14672110 -1.05100380 0.69977324 -0.2331020033
## 236 0.36585255 -0.29202943 -0.63301626 0.49295707 -0.5636741565
## 22 0.86378316 -0.77455902 0.68874662 -0.34581339 -0.8232625244
## 36 -0.08330977 -0.23125614 0.17129609 -0.87717608 -0.4064322611
## 44 -0.28631900 -0.65779570 1.07143294 0.74577621 -0.5260469297
## 92 1.48221717 3.39414792 -0.47710857 0.45950406 -0.3776819464
## 96 -1.25295784 0.21965643 -0.95435386 -1.07329311 -0.3256453781
## 102 0.07333167 -1.18631049 0.29776729 -2.04718107 -0.8517655913
## 107 -0.77182933 -0.90132600 -0.12128025 -0.10698604 -0.6417841040
## 129 -1.39244105 1.84221331 -0.44126448 0.32238609 -0.5834735190
## 161 -0.46888255 -0.04511757 0.75154885 0.20039620 -0.6121150186
## 165 -1.06624159 -0.65454538 0.43014039 0.09579894 0.0001249715
## 187 1.17634116 -0.24163621 -0.91707608 0.71306264 -0.1566846999
## 190 -0.18878828 -0.89920066 1.09744630 -1.24537575 -0.7688036217
## 194 -0.24916164 -1.07586825 -0.44124717 -0.30179829 -0.6142500544
## 222 0.35877544 -0.21324347 0.01692891 -1.63391148 -0.8459095263
## 239 -0.28761264 -0.75810201 1.02669386 -0.97444204 -0.7707882454
## 249 -1.39524423 -0.22091134 1.00852282 -0.64864438 -0.7941850801
## X210909_x_at X211023_at X211378_x_at X211628_x_at X211699_x_at
## 8 -1.25247838 0.03585880 1.36485935 0.04980139 -0.7430093559
## 10 -0.62457873 0.72436646 -0.41022134 0.30920484 -0.7731757605
## 62 -1.59162562 -0.81645909 0.32397024 -0.79847199 3.0939967168
## 74 0.20978215 -3.42593498 -2.13193640 0.38425686 1.2580964989
## 99 1.10904621 0.51388335 -0.39651611 -0.72723388 1.0843969499
## 110 1.31185218 -0.55264262 -0.37868930 -0.88316121 0.2049434056
## 115 -0.95737896 -1.15141133 -0.16538302 1.08855959 0.8339145123
## 121 -0.71832464 0.40938568 -0.68085091 0.03190172 -0.9535096782
## 142 -0.58985231 1.20911559 -1.20477711 0.42561471 -0.4879502368
## 155 0.02505880 0.40957390 0.08931164 -0.56764386 0.4193267131
## 166 0.15445923 -1.40960361 -0.43892231 -1.03623277 0.5569384403
## 211 0.22908117 -0.17564381 -0.32428341 -0.23515493 1.5359586416
## 236 -0.07361239 0.16411793 -0.61225622 -0.98802617 0.3166466166
## 22 -1.07604355 -1.14854012 0.85764802 -0.61855900 0.8240248976
## 36 -0.78709582 0.09057835 1.41094286 1.73498159 -0.1431701217
## 44 -0.91067080 -3.25459920 0.66709331 2.06767163 -0.1901949540
## 92 -1.33173180 0.23619559 0.21329377 0.24536705 1.4670123109
## 96 -0.85729521 0.94046755 -1.84098295 0.20645203 -1.1406479696
## 102 -0.20792589 -0.76034770 0.00754814 0.46070135 0.0006800768
## 107 -0.55360378 0.15422247 0.25755502 0.60940731 -0.8168081502
## 129 -0.05182201 1.49434991 -0.76997899 0.25840190 -1.4741896980
## 161 -0.79404031 1.14972153 0.91420709 0.42309035 -0.4693920808
## 165 -0.92425923 -1.61377583 -1.75737312 -1.55747655 -0.7489836139
## 187 -0.64242596 -0.25540286 -0.52570100 0.01634848 1.2153384112
## 190 -0.77839246 0.09348515 0.46265820 1.36180931 -0.2051595748
## 194 -1.36689622 0.29004527 -0.67906214 1.29024553 -0.3470658714
## 222 -0.12217192 1.23596794 -0.08529381 0.17824954 0.2833856022
## 239 -0.39664464 -0.42858510 0.25325156 0.32029060 -0.5794269430
## 249 -1.05611244 2.27715082 0.30765896 0.07032993 -1.3369634514
## X211745_x_at X211765_x_at X211978_x_at X212149_at X212551_at X212554_at
## 8 -0.64043250 1.200904165 1.42370277 0.663451473 -0.90475954 -0.92230507
## 10 -0.69607482 -0.257713420 -0.42357098 -0.610122947 -0.48539514 0.03330571
## 62 2.79508324 0.305130942 0.43346755 -1.118403877 -0.12917822 -0.15351048
## 74 1.24878734 -2.549075979 -1.98536723 -1.815034597 -0.45630195 -0.78001458
## 99 1.05395937 -0.378024250 -0.30561843 0.025444509 -0.72747513 -0.66222555
## 110 0.20923067 -0.528702495 -0.55364763 -0.408912215 -0.93148179 -1.05373802
## 115 0.89271542 -0.106847377 -0.03744675 0.594608887 1.35052271 1.44636962
## 121 -0.95596708 -0.474892033 -0.62587701 0.044610230 -0.96768835 -1.02052617
## 142 -0.48909950 -1.274121457 -0.88263434 -0.207025640 -1.36804852 -0.49749251
## 155 0.47839364 0.111978986 0.06808553 0.027907662 -0.57952493 -0.58785268
## 166 0.54285200 -0.364709709 -0.63060783 -1.186992033 -0.80815922 -0.88622160
## 211 1.46779335 -0.330915666 -0.34982864 -0.005059268 -0.46520106 -0.52604835
## 236 0.38061320 -0.486904117 -0.53287023 0.039339767 -0.86804147 -1.02954940
## 22 0.69979252 0.906589518 1.02946691 -0.810936896 -0.56994588 -0.79065913
## 36 -0.03153358 1.438502105 1.52989870 0.054838866 1.05129027 0.74184480
## 44 0.16127775 0.510446072 0.65987277 0.119583753 1.33535450 0.94463762
## 92 1.53955581 0.019863080 0.17541449 -0.548170209 0.78452593 0.62912254
## 96 -1.44807902 -2.538422570 -1.84218626 0.529926761 1.06759281 1.78133068
## 102 0.11698636 0.128741915 0.14462026 -0.058350257 0.31123022 0.59431107
## 107 -0.95372043 0.381048309 0.25554858 0.037399450 1.76576878 2.06095202
## 129 -1.41993730 -0.739669471 -0.86185191 0.866574488 0.14617300 0.24784237
## 161 -0.48282228 0.794501637 0.74478806 1.951821955 0.45584882 0.76557358
## 165 -1.56774603 -1.671504646 -1.46628360 -2.820807241 -1.08615067 -1.42644528
## 187 1.16361494 -0.431146445 -0.52070907 0.032222335 -0.72517580 -0.72806928
## 190 -0.22287573 0.540913275 0.53534263 -1.646339454 0.83562793 0.70274322
## 194 -0.09979159 -0.843454605 -0.48335027 0.486299560 0.22649779 0.80751049
## 222 0.38499194 -0.009897249 -0.02751705 -1.685713796 -0.52137293 -0.78513886
## 239 -0.37806832 0.133945195 -0.05339793 -0.500509834 0.04957392 0.07976444
## 249 -1.35652317 0.338957592 0.54624424 2.288844835 0.56021545 0.70185965
## X212661_x_at X213068_at X213629_x_at X214414_x_at X214421_x_at
## 8 1.345611965 1.3769321 -0.80027721 -0.7500179905 0.221382054
## 10 -0.166707878 -0.5427922 -1.34826475 -0.7315749744 0.358300002
## 62 0.232922085 0.3711920 0.38200597 2.3799493502 -0.543689884
## 74 -2.213916390 -0.6358997 0.41243606 1.4920201878 0.494793767
## 99 -0.352675735 2.3300062 0.25093296 1.0210845333 0.731580626
## 110 -0.479660606 0.2221674 0.69918628 0.3731357174 0.849544717
## 115 -0.056903829 -0.9106105 -0.37844480 1.0047232254 0.449930126
## 121 -0.680081555 1.3798986 0.96431292 -0.3775042787 0.706961299
## 142 -1.301382680 1.2272134 0.76794709 0.0007886583 0.373828530
## 155 0.154994343 2.4292244 -0.63726611 0.5232734034 0.602393257
## 166 -0.421402776 -0.5832984 1.22655835 0.3347085286 0.365504743
## 211 -0.245778059 0.8832313 0.81278553 1.3812034350 0.829908936
## 236 -0.498454073 1.3888807 0.49242750 0.4701144851 0.684723578
## 22 0.845735912 -0.9130574 0.37179409 0.7035992602 -0.076895648
## 36 1.369423986 -0.8089296 -0.69701024 -0.2265483145 0.384882022
## 44 0.617820442 -1.0264601 -0.86963643 0.6183947649 -1.952773690
## 92 0.181173151 1.2469140 -0.37916710 1.6181329536 -0.466820652
## 96 -2.745228802 -0.4919715 -1.50228820 -0.8245564486 -0.445584477
## 102 0.133677679 -0.9491862 -0.12216626 0.1030978642 -0.463716992
## 107 0.370659116 0.6073289 -1.18955799 -1.3135198228 -0.320448665
## 129 -0.765360357 -0.2503652 1.20293985 -1.5634655435 0.632347991
## 161 0.931537613 -0.2047790 -0.04044736 -0.3094480386 0.338975525
## 165 -1.237913691 -0.2668961 1.01004159 -0.5057972827 0.675974366
## 187 -0.498571254 1.7482767 0.13622641 1.1250443849 0.611227925
## 190 0.448168472 -0.9465279 -1.53897361 -0.2049204299 -0.232589093
## 194 -0.705518812 -0.9045877 -0.68519160 0.1844011458 0.125497762
## 222 0.004252874 -0.6669790 -1.48074641 0.4961429442 -1.010466314
## 239 0.563322485 -0.7075754 0.31594723 -0.5308456669 -0.114057298
## 249 0.411127324 -1.0448292 -0.75931680 -1.1579412086 -0.003144402
## X214710_s_at X215138_s_at X215330_at X215768_at X216025_x_at X216661_x_at
## 8 2.121096967 2.06289053 -0.1549016 0.82959316 0.19107380 0.12838316
## 10 -0.359695188 -0.75551867 -0.4255396 -0.51436598 0.33426202 0.36236876
## 62 -0.570047342 -0.06955106 0.2459885 -0.55765768 -0.62998006 -0.66035035
## 74 -0.677295543 2.11919761 0.1224027 -0.11399586 0.51386645 0.52623838
## 99 -0.865059914 0.97340107 -0.9982717 0.20231466 0.68682923 0.65976772
## 110 -0.705802108 3.33023981 -1.1139983 0.49128548 0.86039589 0.83964751
## 115 0.059325473 -0.82128907 0.7508154 -0.14632237 0.50594714 0.48700554
## 121 -1.105542405 -1.53153719 -0.2400173 -0.36229994 0.78168885 0.78501785
## 142 -1.031159830 1.88728419 -0.3232463 0.05655932 0.57754570 0.15591839
## 155 -0.725011820 -0.88401096 -0.3909649 0.93312125 0.59132281 0.57291582
## 166 -0.713328159 2.36956685 -0.4148974 -0.49508838 0.32632638 0.49233964
## 211 -0.450516359 -0.13618580 0.1442929 -0.50857968 0.78299007 0.81877623
## 236 -0.815640425 0.40289742 -0.6349759 -0.62519617 0.71603994 0.63295402
## 22 0.008960705 0.96747917 -0.7002928 -0.14864918 -0.06834580 -0.13349767
## 36 1.102136717 -0.12228186 -1.0639935 -0.23413611 0.40701546 0.42245442
## 44 0.585282453 1.82962341 -0.2672225 -0.89964031 -2.08462070 -2.10072914
## 92 -0.642366194 -0.69188988 -1.0167763 1.66551352 -0.44624506 -0.64885938
## 96 0.195842756 0.89501095 -1.0370797 -1.37965935 -0.02617463 -0.66940878
## 102 -0.010106578 -0.13798346 -1.2847716 0.12023788 -0.44591867 -0.50643872
## 107 0.117250948 0.78593893 -0.2758905 -0.54464235 -0.32455643 -0.34271078
## 129 -0.819742454 -0.73576890 -0.2501739 0.50082258 0.56232213 0.58191511
## 161 1.192433646 -1.18077085 0.6198616 1.36066930 0.33677659 0.32012291
## 165 -0.432650043 0.61853630 -0.9352891 0.58240952 0.60330854 0.53918705
## 187 -0.648526292 1.48206662 0.3925976 -0.92755038 0.58419235 0.51601175
## 190 0.744959740 -0.34422683 -0.9240547 -0.76870035 -0.27241998 -0.28624664
## 194 1.029074272 -0.50517763 -1.1338754 1.35895333 0.15276653 -0.08996992
## 222 0.145440111 -0.52216006 -0.9363714 -0.35860575 -1.11991458 -1.24943377
## 239 0.032239266 0.01121985 -0.4697815 -1.24888513 -0.06746783 0.05478428
## 249 -0.453458138 -0.50858153 -0.5508207 -1.67378174 -0.05613762 -0.10584051
## X216782_at X217165_x_at X217319_x_at X217414_x_at X217521_at X218002_s_at
## 8 -1.01734172 -0.72734570 -1.171543389 -0.72149736 -1.40805979 -0.9790793
## 10 1.30326185 -0.71012693 0.524347930 -0.83886051 0.60155357 -0.4855361
## 62 1.52295386 0.29468537 -0.488773534 2.78281041 -0.50727156 0.8431988
## 74 1.12711415 0.29465495 0.630730982 1.35676283 0.39323542 0.9935426
## 99 0.40791193 0.11293282 0.620125611 1.08351183 -0.03408143 1.4541867
## 110 -0.63827100 0.70548700 0.814875136 0.30410869 0.17418607 0.6323156
## 115 0.01750628 0.12871621 -0.210675741 0.91289205 1.05958527 -1.0645112
## 121 0.17648441 0.86575315 0.810506786 -0.50751648 0.49638809 1.1012732
## 142 0.40470627 0.75153581 0.482426833 -0.52359997 -0.78092934 1.5194351
## 155 1.09211322 -0.53549189 0.246732772 0.44952584 0.13138838 1.1300849
## 166 -0.11434963 1.19396320 0.417500062 0.68682244 0.53551989 0.8437775
## 211 0.55213200 0.85944574 0.566695458 1.55050773 0.34293435 1.0393880
## 236 2.09006125 0.45184663 0.998057281 0.31335388 0.27099712 0.6003222
## 22 -1.09563452 0.19311655 -0.874286502 0.83351640 0.24609046 -1.1561820
## 36 -1.00120310 -0.59221969 0.017728605 -0.16660442 1.20192979 -0.6567647
## 44 0.66052129 -1.20623686 -2.519253308 -0.32713092 -1.15555277 -0.8414229
## 92 -0.88813069 -0.34852920 -1.019554806 1.55753960 -1.87751683 -0.6814015
## 96 1.12046837 -1.51040958 -0.844690305 -1.13774096 -0.94705202 -1.0030980
## 102 -0.49602446 0.19847253 0.303548034 -0.01504367 0.12907172 -1.0624667
## 107 0.03657727 -0.94299684 -1.102031208 -0.94878124 0.95289510 -0.3682494
## 129 -0.83126529 1.21723538 0.739102905 -1.48192772 -1.15128560 0.6216614
## 161 -0.63728979 -0.09736641 0.241811029 -0.53762145 -0.31540895 0.5548084
## 165 0.33665078 0.75581000 0.765723567 -0.43720435 0.40627017 -0.5196687
## 187 0.65809302 0.16434704 0.620191893 1.25055579 -1.11238390 1.2213554
## 190 -0.95514817 -1.62347024 -1.089782741 -0.20955818 0.36290217 -1.2469835
## 194 0.24917941 -0.57445824 0.005560723 -0.13333376 0.99789986 -1.0456333
## 222 -0.76511170 -1.48345680 -0.169143865 0.39118943 0.88388863 -0.9518563
## 239 -0.66892560 0.50776404 0.347123023 -0.21047070 0.23775812 -1.0386558
## 249 -0.64807965 -0.43014601 0.627670629 -1.35106205 0.71961724 -1.0570507
## X218061_at X219485_s_at X219787_s_at X220017_x_at X220114_s_at X220116_at
## 8 -0.363726615 0.47898858 1.78353646 0.22648380 -0.715530937 -0.7606941
## 10 1.320779355 -0.67535576 -0.40787948 0.38888491 -0.428606431 -0.7832212
## 62 -0.682727035 0.07740487 -0.48762665 -0.52156451 -0.692519282 -0.8320273
## 74 -0.676118104 -1.54000417 -1.02666193 0.51504047 -0.001276114 -0.8543142
## 99 -1.064348976 0.06275416 -0.84181968 0.67933015 1.090788133 1.0775147
## 110 -0.748028126 -0.47998535 -0.77112760 0.82789466 0.470738921 0.9927274
## 115 1.626778112 2.00684660 0.82191798 0.48488589 -1.238367537 -0.8855541
## 121 -0.169096872 -1.17795946 -0.83176624 0.77579176 0.239076235 0.2126361
## 142 -0.005211059 -0.34955644 -0.66800071 0.54752397 1.075509388 0.4445970
## 155 -0.843352789 0.15114161 -0.58257069 0.60852008 0.496838081 -0.4702193
## 166 0.120352148 -1.24811320 -0.73870242 0.42725342 0.486513901 0.6606196
## 211 -0.877263010 -0.08441009 -0.63552282 0.79027613 -0.036068030 -0.8770543
## 236 -0.610583288 -0.77320513 -0.83867831 0.68305519 -0.034768719 -0.8475836
## 22 0.939446138 1.28062233 0.29564877 -0.06082903 -0.972090195 -0.9931830
## 36 2.172182178 1.02772544 0.98315376 0.35278786 -0.495520812 -0.7489649
## 44 1.594748305 -0.33625760 1.03684289 -1.97703996 -0.741748058 -0.7918421
## 92 -0.411627852 0.74565434 -0.13653218 -0.45722975 -0.784453589 -0.1555375
## 96 0.167413657 0.50273872 0.72422677 0.08578416 -1.198289347 -0.5506633
## 102 0.526547918 1.98376334 -0.03424842 -0.44845328 -1.147526403 -0.9663999
## 107 2.467338168 0.57539805 -0.17759327 -0.27172088 -0.724280337 -0.8214711
## 129 -0.399192135 0.29273587 -0.72385105 0.67291997 -0.596113801 1.1285100
## 161 1.472055038 0.80830067 0.65948021 0.34718768 -0.266521951 -0.3652029
## 165 -0.987305130 -2.20374806 -0.63225251 0.56128519 0.604107657 -0.4811539
## 187 -0.515946197 -0.34250386 -0.94114555 0.58001067 0.206512791 -0.8907028
## 190 1.364470331 0.77156550 0.51834794 -0.23006788 -0.739727530 1.3440761
## 194 0.482098633 0.65860475 0.68122411 0.27372815 -1.094790117 -0.7901446
## 222 -0.217754217 -0.82881315 -0.37847639 -0.96794651 -0.735052162 -0.9149675
## 239 3.255241147 0.04655425 -0.29246210 -0.05258354 -0.790995197 -0.8643856
## 249 -0.005791227 -0.36275026 -0.16936502 -0.03961615 -1.021638330 -0.9575494
## X220148_at X220491_at X220496_at X36829_at
## 8 0.17760803 -1.30072913 -1.00146705 0.01175210
## 10 -0.15087030 -0.03620534 -0.82602116 1.46958026
## 62 -1.04868417 0.33580438 -1.19746992 1.94369919
## 74 0.53845426 0.34414166 0.59917965 1.23311741
## 99 0.86332483 0.82482882 0.65330309 -0.59153672
## 110 0.79308090 1.04483117 0.90218594 1.07549276
## 115 -0.03345968 0.02599222 -0.97005348 0.23206853
## 121 0.83898815 -1.16841514 -0.04036802 0.97791509
## 142 0.70753296 0.97344821 0.73552820 -0.32181375
## 155 0.61748456 0.95440516 -0.01170651 0.06293983
## 166 0.69153786 1.18676285 1.41823116 0.23834820
## 211 0.70883598 0.83594378 0.41603185 0.35696445
## 236 0.58383271 0.70429479 -0.20659934 0.23339596
## 22 -0.19785566 -0.99235861 -0.70530770 -0.70127577
## 36 0.04310548 -0.24146661 -0.86494803 0.24208770
## 44 -3.11179534 -0.81971813 -0.77890578 0.08371583
## 92 -0.84034505 0.08719084 -0.34826068 -0.13832983
## 96 -0.58016639 -0.88545723 -0.98175471 -0.57521726
## 102 -0.07349680 -1.54785462 -0.96620572 -0.37528967
## 107 -0.41481172 0.62320484 -0.34344788 -0.38555970
## 129 0.75847298 -0.27433330 0.16707444 -0.15695071
## 161 0.10004369 0.28472283 0.73954458 -0.10481743
## 165 0.41859616 0.95821775 -0.86438566 -0.34253515
## 187 0.42867085 0.49916741 0.31210657 0.31376636
## 190 -0.12702322 -1.34302456 -1.11804184 0.09144800
## 194 0.55468227 -1.59768113 -0.93816268 -0.32724488
## 222 -0.65724049 -0.56709663 -1.06750972 -0.64586072
## 239 0.22785259 -1.26466001 -0.94851065 0.36540438
## 249 0.37540830 -0.85086091 -1.09429302 0.82218252A dataset will be created with only 2 of the most important genes (based on Boruta). This allows for better investigation of the svm models.
d = as.data.frame(list(new_df$type,new_df$X218002_s_at,new_df$X220114_s_at))
colnames(d)[1]='type'
colnames(d)[2]='gene1'
colnames(d)[3]='gene2'The X shapes represent the support vectors. It can be noticed that increasing c will generally decrease the number of used support vectors. It will also increase the bias leading to more classifications as can be seen.
c = svm(type~.,d,cost=2)
length(c$SV)/2 # the number of support vectors## [1] 43plot(c,d)
c = svm(type~.,d,cost=100)
length(c$SV)/2## [1] 40plot(c,d)
c = svm(type~.,d,cost=100000000)
length(c$SV)/2## [1] 32plot(c,d)
The filled shapes represent the support vectors.
kernfit <- ksvm(type~.,data=d, type = "C-svc", C = 10)
plot(kernfit,data=d)
kernfit <- ksvm(type~.,data=d, type = "C-svc", C = 100)
plot(kernfit,data=d)
kernfit <- ksvm(type~.,data=d, type = "C-svc", C = 100000000)
plot(kernfit,data=d)
On the other hand, it can also be shown that for small values of c, just
adding one observation will lead to significant changes in the support
vectors. Yet, for large values of c almost no such changes occur (much
lower variance)/
kernfit <- ksvm(type~.,data=d[1:(nrow(d)-100),], type = "C-svc", C = 2)
plot(kernfit,data=d)
kernfit <- ksvm(type~.,data=d[1:(nrow(d)-99),], type = "C-svc", C = 2)
plot(kernfit,data=d)
kernfit <- ksvm(type~.,data=d[1:(nrow(d)-100),1:3], type = "C-svc", C = 100000000)
plot(kernfit,data=d[1:3])
kernfit <- ksvm(type~.,data=d[1:(nrow(d)-99),1:3], type = "C-svc", C = 100000000)
plot(kernfit,data=d[1:3])
So it can be generally seen that large values of c will lead to
decreased variance with high bias (underfitting). Yet, small values of c
lead to increased variance with low bias (overfitting). There is no one
way to find the optimal c choice.
Next, another type of kernel will be used (radial), and the optimal c value will be chosen based on the tune function.
tune.out <- tune(svm, type~., data = new_df, kernel = "radial",
ranges = list(cost = c(0.1,1,2,5,10,100,1000,10000),
gamma = c(0.5,1,2,3,4)))
# show best model
tune.out$best.model##
## Call:
## best.tune(METHOD = svm, train.x = type ~ ., data = new_df, ranges = list(cost = c(0.1,
## 1, 2, 5, 10, 100, 1000, 10000), gamma = c(0.5, 1, 2, 3, 4)),
## kernel = "radial")
##
##
## Parameters:
## SVM-Type: C-classification
## SVM-Kernel: radial
## cost: 0.1
##
## Number of Support Vectors: 357The best c choice is shown to be 2.
new_df = new_df %>%
dplyr::mutate(id=row_number())
training = new_df%>%
slice_sample(prop=0.7)
nrow(training)## [1] 249testing = anti_join(new_df,training,by='id')
nrow(testing)## [1] 108training = training%>%
dplyr::select(-id)
testing = testing%>%
dplyr::select(-id)
new_df=new_df[-ncol(new_df)]classifierN = svm(formula = type ~.,
data = training,
type = 'C-classification',
kernel = 'radial',scale=TRUE,cost=2)
probs <- predict(classifier, newdata = testing,type='response')
pred <- rep("HCC",nrow(testing))
pred[probs ==1] <- "normal"
t = confusionMatrix(as.factor(pred), reference=factor(testing$type,labels=c('HCC','normal')))
t## Confusion Matrix and Statistics
##
## Reference
## Prediction HCC normal
## HCC 53 0
## normal 1 54
##
## Accuracy : 0.9907
## 95% CI : (0.9495, 0.9998)
## No Information Rate : 0.5
## P-Value [Acc > NIR] : <2e-16
##
## Kappa : 0.9815
##
## Mcnemar's Test P-Value : 1
##
## Sensitivity : 0.9815
## Specificity : 1.0000
## Pos Pred Value : 1.0000
## Neg Pred Value : 0.9818
## Prevalence : 0.5000
## Detection Rate : 0.4907
## Detection Prevalence : 0.4907
## Balanced Accuracy : 0.9907
##
## 'Positive' Class : HCC
## A testing accuracy of 100% was used using the radial kernel with cost of 2. Using the repeated cv approach does not allow control over the cost parameter, but its results for some c choices are also shown to be almost perfect.
train_control <- trainControl(method = "repeatedcv")
model <- train(type ~., new_df,
method = "svmRadial",
trControl = train_control)
print(model)## Support Vector Machines with Radial Basis Function Kernel
##
## 357 samples
## 107 predictors
## 2 classes: '0', '1'
##
## No pre-processing
## Resampling: Cross-Validated (10 fold, repeated 1 times)
## Summary of sample sizes: 322, 322, 322, 320, 321, 321, ...
## Resampling results across tuning parameters:
##
## C Accuracy Kappa
## 0.25 0.9719798 0.9439635
## 0.50 0.9776941 0.9553828
## 1.00 0.9776941 0.9553828
##
## Tuning parameter 'sigma' was held constant at a value of 0.01055571
## Accuracy was used to select the optimal model using the largest value.
## The final values used for the model were sigma = 0.01055571 and C = 0.5.SVM might also be run upon PCA application to allow for visualization of the full model. To this end a function is used to extract the PC1 and PC2 values for all observations to create a dataset using them.
pca <- prcomp(new_df[-1],scale=T)
c1 = as.data.frame(get_pca_ind(pca)[1])[1]
c2 = as.data.frame(get_pca_ind(pca)[1])[2]
d = cbind(new_df[1],c1,c2)
colnames(d)[2]='PC1'
colnames(d)[3]='PC2'Both models with linear and radial kernels are shown to have very good seperation of the HCC and normal cases, which explains the high accuracy rates they both resulted in before. It can also be noticed that the linear kernel model is more robust and less prone to change with C increase.
pc = svm(formula = type ~.,
data = d,
type = 'C-classification',
kernel = 'radial',scale=TRUE,cost=2)
plot(pc,d)
pc = svm(formula = type ~.,
data = d,
type = 'C-classification',
kernel = 'radial',scale=TRUE,cost=100000)
plot(pc,d)
pc = svm(formula = type ~.,
data = d,
type = 'C-classification',
kernel = 'linear',scale=TRUE)
plot(pc,d)
pc = svm(formula = type ~.,
data = d,
type = 'C-classification',
kernel = 'linear',scale=TRUE,cost=100000)
plot(pc,d)